Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-10-28 00:37:20,587 [ scc.config] DEBUG Found github.token
2024-10-28 00:37:20,591 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-28 00:37:20,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:37:21,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:37:21,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-28 00:37:21,531 [ scc.gh] DEBUG 4369 remaining from 5000 (Reset at 01:10
2024-10-28 00:37:21,539 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-28 00:37:21,579 [ scc.git] DEBUG Check current status
2024-10-28 00:37:21,580 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-28 00:37:21,602 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-28 00:37:21,604 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-28 00:37:21,708 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-28 00:37:21,711 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-28 00:37:21,715 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-28 00:37:21,720 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-28 00:37:21,723 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-28 00:37:21,728 [ scc.config] DEBUG Found remote.origin.url
2024-10-28 00:37:21,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-28 00:37:22,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-28 00:37:22,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-28 00:37:23,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-28 00:37:23,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-28 00:37:23,639 [ scc.git] DEBUG Resetting...
2024-10-28 00:37:23,639 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-28 00:37:23,645 [ scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-28 00:37:23,645 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-28 00:37:23,694 [ scc.git] DEBUG Check current status
2024-10-28 00:37:23,695 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-28 00:37:23,698 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-28 00:37:23,699 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-28 00:37:23,737 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-28 00:37:23,739 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-28 00:37:23,743 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-28 00:37:23,746 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-28 00:37:23,749 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-28 00:37:23,750 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-28 00:37:23,750 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-28 00:37:23,750 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-28 00:37:23,750 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-28 00:37:23,750 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-28 00:37:23,751 [ scc.repo] DEBUG ## PRs found:
2024-10-28 00:37:24,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-28 00:37:24,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-28 00:37:24,606 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-28 00:37:24,606 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-28 00:37:24,606 [ scc.repo] DEBUG ## Branches found:
2024-10-28 00:37:24,606 [ scc.git] DEBUG Get sha1 of %s
2024-10-28 00:37:24,606 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:37:24,610 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-28 00:37:24,614 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-28 00:37:24,614 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-28 00:37:24,618 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-28 00:37:24,622 [ scc.git] DEBUG Already up to date.
2024-10-28 00:37:24,623 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-28 00:37:24,917 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-28 00:37:24,917 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-28 00:37:24,922 [ scc.git] DEBUG ## Unique users: []
2024-10-28 00:37:24,922 [ scc.git] DEBUG Get sha1 of %s
2024-10-28 00:37:24,922 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:37:24,926 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-28 00:37:24,931 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:37:24,934 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-28 00:37:24,943 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-28 00:37:24,945 [ scc.git] DEBUG omero-py | 2 +-
2024-10-28 00:37:24,945 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-10-28 00:37:25,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:37:25,079 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-28 00:37:25,615 [ scc.git] DEBUG Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba'
2024-10-28 00:37:25,615 [ scc.git] DEBUG Get sha1 of %s
2024-10-28 00:37:25,616 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:37:25,620 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-28 00:37:25,937 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3d7a54b8b0> has no local changes
2024-10-28 00:37:25,937 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Generated by OMERO-python-superbuild-push#216 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/216/)'
2024-10-28 00:37:25,962 [ scc.git] DEBUG [detached HEAD 9c3d1b3] merge master -Dorg -Snone
2024-10-28 00:37:25,963 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-28 00:37:25,963 [ scc.merge] INFO Already up to date.
2024-10-28 00:37:25,963 [ scc.merge] INFO
2024-10-28 00:37:25,963 [ scc.merge] INFO Merged PRs:
2024-10-28 00:37:25,963 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-28 00:37:25,963 [ scc.merge] INFO
2024-10-28 00:37:25,963 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-28 00:37:25,963 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-28 00:37:28,089 [ scc.config] DEBUG Found github.token
2024-10-28 00:37:28,092 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-28 00:37:28,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:37:28,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:37:29,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-28 00:37:29,044 [ scc.gh] DEBUG 4359 remaining from 5000 (Reset at 01:10
2024-10-28 00:37:29,044 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-28 00:37:29,048 [ scc.git] DEBUG Check current status
2024-10-28 00:37:29,048 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-28 00:37:29,051 [ scc.git] DEBUG 9c3d1b3 merge master -Dorg -Snone
2024-10-28 00:37:29,051 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-28 00:37:29,091 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-28 00:37:29,094 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-28 00:37:29,097 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-28 00:37:29,101 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-28 00:37:29,104 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-28 00:37:29,108 [ scc.config] DEBUG Found remote.origin.url
2024-10-28 00:37:29,109 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-10-28 00:37:29,110 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-28 00:37:29,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-28 00:37:29,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-28 00:37:30,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-28 00:37:30,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-28 00:37:31,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-28 00:37:31,276 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-28 00:37:31,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-28 00:37:31,321 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-28 00:37:31,325 [ scc.git] DEBUG Check current status
2024-10-28 00:37:31,325 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-28 00:37:31,329 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-10-28 00:37:31,329 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-28 00:37:31,371 [ scc.config] DEBUG Found remote.origin.url
2024-10-28 00:37:31,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-10-28 00:37:32,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-28 00:37:32,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-28 00:37:32,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-28 00:37:33,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-28 00:37:33,391 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-28 00:37:33,438 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-28 00:37:33,439 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-28 00:37:33,439 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-28 00:37:33,442 [ scc.git] DEBUG Check current status
2024-10-28 00:37:33,442 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-28 00:37:33,446 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-10-28 00:37:33,446 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-28 00:37:33,492 [ scc.config] DEBUG Found remote.origin.url
2024-10-28 00:37:33,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-10-28 00:37:34,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-28 00:37:34,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-28 00:37:35,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-28 00:37:35,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-28 00:37:35,550 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-28 00:37:35,612 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-28 00:37:35,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-28 00:37:35,613 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-28 00:37:35,618 [ scc.git] DEBUG Check current status
2024-10-28 00:37:35,619 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-28 00:37:35,912 [ scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0
2024-10-28 00:37:35,912 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-28 00:37:35,972 [ scc.config] DEBUG Found remote.origin.url
2024-10-28 00:37:36,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-10-28 00:37:36,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-28 00:37:37,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-28 00:37:37,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-28 00:37:37,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-28 00:37:37,807 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-28 00:37:37,849 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-28 00:37:37,850 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-28 00:37:37,850 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-28 00:37:37,854 [ scc.git] DEBUG Check current status
2024-10-28 00:37:37,854 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-28 00:37:37,924 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-28 00:37:37,924 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-28 00:37:37,972 [ scc.config] DEBUG Found remote.origin.url
2024-10-28 00:37:37,973 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-10-28 00:37:38,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-10-28 00:37:38,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-28 00:37:39,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-28 00:37:39,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-28 00:37:39,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-28 00:37:39,883 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-28 00:37:39,919 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-28 00:37:39,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-28 00:37:39,920 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-28 00:37:39,925 [ scc.git] DEBUG Check current status
2024-10-28 00:37:39,925 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-28 00:37:39,930 [ scc.git] DEBUG da5b7d11f Bump version: 5.27.2 → 5.27.3.dev0
2024-10-28 00:37:39,930 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-28 00:37:39,971 [ scc.config] DEBUG Found remote.origin.url
2024-10-28 00:37:40,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-10-28 00:37:40,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-28 00:37:41,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-28 00:37:41,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-28 00:37:41,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-28 00:37:41,964 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-28 00:37:42,002 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-28 00:37:42,002 [ scc.git] DEBUG Resetting...
2024-10-28 00:37:42,002 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-28 00:37:42,008 [ scc.git] DEBUG HEAD is now at 9c3d1b3 merge master -Dorg -Snone
2024-10-28 00:37:42,008 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-28 00:37:42,055 [ scc.git] DEBUG Check current status
2024-10-28 00:37:42,055 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-28 00:37:42,059 [ scc.git] DEBUG 9c3d1b3 merge master -Dorg -Snone
2024-10-28 00:37:42,059 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-28 00:37:42,095 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-28 00:37:42,098 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-28 00:37:42,102 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-28 00:37:42,105 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-28 00:37:42,108 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-28 00:37:42,109 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-28 00:37:42,109 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-28 00:37:42,109 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-28 00:37:42,109 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-28 00:37:42,110 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-28 00:37:42,110 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-10-28 00:37:42,110 [ scc.repo] DEBUG ## PRs found:
2024-10-28 00:37:42,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-28 00:37:42,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-28 00:37:42,909 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-28 00:37:43,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-28 00:37:43,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-28 00:37:44,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-28 00:37:44,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/9660559833988d271074de56e54f2462a7be74e9?per_page=1 HTTP/1.1" 200 2
2024-10-28 00:37:44,810 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-28 00:37:44,810 [ scc.repo] DEBUG ## Branches found:
2024-10-28 00:37:44,811 [ scc.git] DEBUG Get sha1 of %s
2024-10-28 00:37:44,811 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:37:44,815 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-28 00:37:44,818 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-28 00:37:44,818 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-28 00:37:44,822 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-28 00:37:44,826 [ scc.git] DEBUG Already up to date.
2024-10-28 00:37:44,826 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-28 00:37:45,120 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-28 00:37:45,120 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-28 00:37:45,124 [ scc.git] DEBUG ## Unique users: []
2024-10-28 00:37:45,124 [ scc.git] DEBUG Get sha1 of %s
2024-10-28 00:37:45,125 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:37:45,128 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-28 00:37:45,132 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:37:45,135 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-28 00:37:45,139 [ scc.git] DEBUG Already up to date.
2024-10-28 00:37:45,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:37:45,293 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-28 00:37:45,331 [ scc.git] DEBUG Get sha1 of %s
2024-10-28 00:37:45,331 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:37:45,335 [ scc.repo] DEBUG ## PRs found:
2024-10-28 00:37:45,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-10-28 00:37:46,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-10-28 00:37:46,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-10-28 00:37:47,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-28 00:37:47,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-28 00:37:47,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-28 00:37:48,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-10-28 00:37:48,394 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-28 00:37:48,394 [ scc.repo] DEBUG ## Branches found:
2024-10-28 00:37:48,394 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-28 00:37:48,394 [ scc.git] DEBUG Get sha1 of %s
2024-10-28 00:37:48,394 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:37:48,399 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-28 00:37:48,402 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-28 00:37:48,402 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-28 00:37:48,406 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-28 00:37:48,410 [ scc.git] DEBUG Already up to date.
2024-10-28 00:37:48,410 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-10-28 00:37:48,780 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-10-28 00:37:48,780 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-10-28 00:37:48,784 [ scc.git] DEBUG ## Unique users: []
2024-10-28 00:37:48,784 [ scc.git] DEBUG Get sha1 of %s
2024-10-28 00:37:48,785 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:37:48,789 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-28 00:37:48,793 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:37:48,796 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-28 00:37:49,293 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-10-28 00:37:49,293 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-10-28 00:37:49,293 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-10-28 00:37:49,293 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-10-28 00:37:49,293 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-10-28 00:37:49,293 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-10-28 00:37:49,293 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-10-28 00:37:49,294 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-10-28 00:37:49,294 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-10-28 00:37:49,294 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-28 00:37:49,297 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-10-28 00:37:49,297 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-10-28 00:37:49,297 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-10-28 00:37:49,297 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-10-28 00:37:49,297 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-10-28 00:37:49,297 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-10-28 00:37:49,298 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-10-28 00:37:49,298 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-10-28 00:37:49,300 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-10-28 00:37:49,300 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-10-28 00:37:49,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:37:49,429 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-28 00:37:49,467 [ scc.git] DEBUG Get sha1 of %s
2024-10-28 00:37:49,468 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:37:49,472 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-28 00:37:49,509 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-28 00:37:49,515 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f812c8219a0> has no local changes
2024-10-28 00:37:49,515 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#216 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/216/)'
2024-10-28 00:37:49,523 [ scc.git] DEBUG [detached HEAD cdff7b1] merge master -Dorg -Ssuccess-only
2024-10-28 00:37:49,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-28 00:37:49,523 [ scc.repo] DEBUG ## PRs found:
2024-10-28 00:37:49,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-10-28 00:37:50,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-10-28 00:37:50,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-10-28 00:37:51,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-28 00:37:51,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-28 00:37:52,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-28 00:37:52,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-10-28 00:37:52,631 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-28 00:37:53,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-10-28 00:37:53,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-10-28 00:37:53,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-10-28 00:37:54,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-10-28 00:37:54,378 [ scc.repo] DEBUG ## Branches found:
2024-10-28 00:37:54,378 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-28 00:37:54,378 [ scc.git] DEBUG Get sha1 of %s
2024-10-28 00:37:54,378 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:37:54,382 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-28 00:37:54,385 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-28 00:37:54,386 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-28 00:37:54,389 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-28 00:37:54,394 [ scc.git] DEBUG Already up to date.
2024-10-28 00:37:54,395 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-10-28 00:37:54,989 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-10-28 00:37:54,989 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-10-28 00:37:54,993 [ scc.git] DEBUG ## Unique users: []
2024-10-28 00:37:54,993 [ scc.git] DEBUG Get sha1 of %s
2024-10-28 00:37:54,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:37:54,998 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-28 00:37:55,003 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:37:55,006 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-28 00:37:55,099 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-10-28 00:37:55,100 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-28 00:37:55,103 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-10-28 00:37:55,103 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-10-28 00:37:55,103 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-10-28 00:37:55,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:37:55,232 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-28 00:37:55,268 [ scc.git] DEBUG Get sha1 of %s
2024-10-28 00:37:55,268 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:37:55,272 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-28 00:37:55,309 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-28 00:37:55,314 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f812c7ba820> has no local changes
2024-10-28 00:37:55,314 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#216 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/216/)'
2024-10-28 00:37:55,322 [ scc.git] DEBUG [detached HEAD 7a933c7] merge master -Dorg -Ssuccess-only
2024-10-28 00:37:55,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-28 00:37:55,323 [ scc.repo] DEBUG ## PRs found:
2024-10-28 00:37:55,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-10-28 00:37:56,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/431 HTTP/1.1" 200 None
2024-10-28 00:37:56,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-28 00:37:57,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-28 00:37:57,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-28 00:37:58,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-28 00:37:58,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0e500ec05bf9227b66b28a480b40e0936241d953?per_page=1 HTTP/1.1" 200 None
2024-10-28 00:37:59,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-28 00:37:59,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/status HTTP/1.1" 200 None
2024-10-28 00:37:59,672 [ scc.repo] DEBUG - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-28 00:38:00,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None
2024-10-28 00:38:00,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None
2024-10-28 00:38:01,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None
2024-10-28 00:38:01,007 [ scc.repo] DEBUG # ... Include label: include
2024-10-28 00:38:01,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-28 00:38:01,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-28 00:38:02,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-28 00:38:02,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-28 00:38:03,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1?per_page=1 HTTP/1.1" 200 None
2024-10-28 00:38:03,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-28 00:38:04,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/status HTTP/1.1" 200 None
2024-10-28 00:38:04,087 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation'
2024-10-28 00:38:04,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-10-28 00:38:04,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-10-28 00:38:05,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-28 00:38:05,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-28 00:38:06,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-28 00:38:06,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-28 00:38:07,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-10-28 00:38:07,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-28 00:38:08,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-10-28 00:38:08,152 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-10-28 00:38:08,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-10-28 00:38:09,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-10-28 00:38:09,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-10-28 00:38:10,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-28 00:38:10,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-28 00:38:11,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-10-28 00:38:11,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-28 00:38:11,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-28 00:38:12,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-28 00:38:12,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-28 00:38:13,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-10-28 00:38:13,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-28 00:38:14,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-10-28 00:38:14,286 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-10-28 00:38:14,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-10-28 00:38:14,805 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-10-28 00:38:15,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-10-28 00:38:15,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-10-28 00:38:16,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-28 00:38:16,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-28 00:38:17,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-28 00:38:17,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-10-28 00:38:17,539 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-28 00:38:17,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-10-28 00:38:18,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-10-28 00:38:18,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-28 00:38:19,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-28 00:38:19,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-28 00:38:20,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-28 00:38:20,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-10-28 00:38:21,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-28 00:38:21,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-10-28 00:38:21,582 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-10-28 00:38:22,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-10-28 00:38:22,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-10-28 00:38:22,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-10-28 00:38:23,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-10-28 00:38:23,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-28 00:38:24,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-28 00:38:24,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-28 00:38:25,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-10-28 00:38:25,192 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-28 00:38:25,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-10-28 00:38:26,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-28 00:38:26,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-28 00:38:27,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-28 00:38:27,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-10-28 00:38:27,416 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-28 00:38:27,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-10-28 00:38:28,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-10-28 00:38:28,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-28 00:38:29,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-28 00:38:29,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-28 00:38:30,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-10-28 00:38:30,151 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-28 00:38:30,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-10-28 00:38:31,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-10-28 00:38:31,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-28 00:38:31,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-28 00:38:32,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-28 00:38:32,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-10-28 00:38:32,804 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-10-28 00:38:33,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-10-28 00:38:33,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-10-28 00:38:34,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-10-28 00:38:34,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-10-28 00:38:34,707 [ scc.repo] DEBUG ## Branches found:
2024-10-28 00:38:34,707 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-28 00:38:34,707 [ scc.git] DEBUG Get sha1 of %s
2024-10-28 00:38:34,707 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:38:34,712 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-28 00:38:34,716 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-28 00:38:34,716 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-28 00:38:34,721 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-28 00:38:34,725 [ scc.git] DEBUG Already up to date.
2024-10-28 00:38:34,725 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-10-28 00:38:35,175 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-28 00:38:35,175 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-10-28 00:38:35,180 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-10-28 00:38:35,492 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-28 00:38:35,493 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-10-28 00:38:35,497 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-10-28 00:38:35,972 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-28 00:38:35,972 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-10-28 00:38:35,977 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-10-28 00:38:36,260 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-28 00:38:36,261 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-10-28 00:38:36,264 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-10-28 00:38:36,675 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-28 00:38:36,675 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-10-28 00:38:36,679 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-10-28 00:38:36,959 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-28 00:38:36,960 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-10-28 00:38:36,964 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-10-28 00:38:37,249 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-28 00:38:37,249 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-10-28 00:38:37,254 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-10-28 00:38:37,689 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-28 00:38:37,689 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-10-28 00:38:37,694 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2024-10-28 00:38:38,559 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-28 00:38:38,559 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD
2024-10-28 00:38:38,564 [ scc.git] DEBUG Calling 'git fetch origin pull/431/head'
2024-10-28 00:38:38,949 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-28 00:38:38,950 [ scc.git] DEBUG * branch refs/pull/431/head -> FETCH_HEAD
2024-10-28 00:38:38,957 [ scc.git] DEBUG ## Unique users: []
2024-10-28 00:38:38,957 [ scc.git] DEBUG Get sha1 of %s
2024-10-28 00:38:38,958 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:38:38,964 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-28 00:38:38,975 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:38:38,979 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-28 00:38:39,185 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-10-28 00:38:39,186 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-10-28 00:38:39,186 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-28 00:38:39,191 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-10-28 00:38:39,191 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-10-28 00:38:39,191 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-10-28 00:38:39,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:38:39,318 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-28 00:38:39,330 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:38:39,334 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-28 00:38:39,767 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-28 00:38:39,767 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-10-28 00:38:39,768 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-28 00:38:39,775 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-10-28 00:38:39,775 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-10-28 00:38:39,775 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-10-28 00:38:39,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:38:39,906 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-28 00:38:39,918 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:38:39,922 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-28 00:38:39,992 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-10-28 00:38:39,993 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-28 00:38:39,996 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-10-28 00:38:39,996 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-10-28 00:38:40,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:38:40,306 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-28 00:38:40,317 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:38:40,320 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-28 00:38:40,538 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-10-28 00:38:40,538 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-10-28 00:38:40,539 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-28 00:38:40,542 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-10-28 00:38:40,542 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-10-28 00:38:40,542 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-10-28 00:38:40,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:38:40,689 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-28 00:38:40,700 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:38:40,704 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-28 00:38:40,728 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-28 00:38:40,731 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-10-28 00:38:40,731 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-10-28 00:38:40,731 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-10-28 00:38:40,731 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-10-28 00:38:40,731 [ scc.git] DEBUG create mode 100644 connect.py
2024-10-28 00:38:41,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:38:41,076 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-28 00:38:41,087 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:38:41,092 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-28 00:38:41,138 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-10-28 00:38:41,139 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-28 00:38:41,143 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-10-28 00:38:41,143 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-10-28 00:38:41,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:38:41,461 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-10-28 00:38:41,474 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:38:41,479 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-10-28 00:38:41,631 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-10-28 00:38:41,631 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-28 00:38:41,635 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-10-28 00:38:41,636 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-10-28 00:38:41,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:38:41,851 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-28 00:38:41,862 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:38:41,867 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-28 00:38:41,987 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-28 00:38:41,988 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-28 00:38:41,995 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-10-28 00:38:41,996 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-10-28 00:38:42,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:38:42,233 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-28 00:38:42,247 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:38:42,252 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-28 00:38:42,273 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-28 00:38:42,276 [ scc.git] DEBUG .gitignore | 1 +
2024-10-28 00:38:42,276 [ scc.git] DEBUG src/omero/plugins/download.py | 17 ++++++++++++-----
2024-10-28 00:38:42,276 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 5 deletions(-)
2024-10-28 00:38:42,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:38:42,618 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-28 00:38:42,629 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:38:42,633 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 431 (omero.HdfStorage.update: add size check on data.rowNumbers) 0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-28 00:38:42,665 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-28 00:38:42,668 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 1 +
2024-10-28 00:38:42,668 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2024-10-28 00:38:43,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:38:43,002 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-28 00:38:43,044 [ scc.git] DEBUG Get sha1 of %s
2024-10-28 00:38:43,044 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:38:43,051 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-28 00:38:43,093 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-28 00:38:43,100 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f812b769ee0> has no local changes
2024-10-28 00:38:43,100 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Generated by OMERO-python-superbuild-push#216 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/216/)'
2024-10-28 00:38:43,108 [ scc.git] DEBUG [detached HEAD ef932fb5] merge master -Dorg -Ssuccess-only
2024-10-28 00:38:43,108 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-28 00:38:43,108 [ scc.git] INFO Overriding base-branch from master to develop
2024-10-28 00:38:43,109 [ scc.repo] DEBUG ## PRs found:
2024-10-28 00:38:43,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-10-28 00:38:44,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-10-28 00:38:44,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2024-10-28 00:38:45,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-28 00:38:45,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-28 00:38:46,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-28 00:38:46,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-28 00:38:46,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-10-28 00:38:46,883 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-28 00:38:47,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-10-28 00:38:47,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-10-28 00:38:48,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-10-28 00:38:48,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-10-28 00:38:49,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-10-28 00:38:49,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-10-28 00:38:50,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-28 00:38:50,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-28 00:38:51,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-28 00:38:51,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-10-28 00:38:51,568 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-28 00:38:52,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-10-28 00:38:52,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-10-28 00:38:52,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-10-28 00:38:53,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-10-28 00:38:53,431 [ scc.repo] DEBUG ## Branches found:
2024-10-28 00:38:53,431 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-28 00:38:53,432 [ scc.git] DEBUG Get sha1 of %s
2024-10-28 00:38:53,432 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:38:53,436 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-10-28 00:38:53,440 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-28 00:38:53,440 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-10-28 00:38:53,446 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-10-28 00:38:53,451 [ scc.git] DEBUG Already up to date.
2024-10-28 00:38:53,451 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-10-28 00:38:53,879 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-28 00:38:53,879 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-10-28 00:38:53,885 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-10-28 00:38:54,561 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-28 00:38:54,561 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-10-28 00:38:54,566 [ scc.git] DEBUG ## Unique users: []
2024-10-28 00:38:54,567 [ scc.git] DEBUG Get sha1 of %s
2024-10-28 00:38:54,567 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:38:54,572 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-28 00:38:54,579 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:38:54,584 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-28 00:38:54,628 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-10-28 00:38:54,628 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-10-28 00:38:54,628 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-10-28 00:38:54,628 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-10-28 00:38:54,635 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-28 00:38:54,641 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-28 00:38:54,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:38:54,784 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-28 00:38:54,791 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-28 00:38:54,795 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#216](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/216/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/216/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-10-28 00:38:54,798 [ scc.config] DEBUG Found github.token
2024-10-28 00:38:54,799 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-10-28 00:38:54,799 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-28 00:38:54,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:38:54,807 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-28 00:38:54,830 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-28 00:38:54,833 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-10-28 00:38:54,833 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-10-28 00:38:55,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:38:55,164 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-28 00:38:55,203 [ scc.git] DEBUG Get sha1 of %s
2024-10-28 00:38:55,203 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:38:55,207 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-28 00:38:55,248 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-28 00:38:55,254 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f812b757be0> has no local changes
2024-10-28 00:38:55,255 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#216 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/216/)'
2024-10-28 00:38:55,262 [ scc.git] DEBUG [detached HEAD f54b8f2] merge master -Dorg -Ssuccess-only
2024-10-28 00:38:55,263 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-28 00:38:55,263 [ scc.repo] DEBUG ## PRs found:
2024-10-28 00:38:55,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-10-28 00:38:56,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/589 HTTP/1.1" 200 None
2024-10-28 00:38:56,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/33cf0eb27577cdf0651aa994cfd52add56f49459 HTTP/1.1" 200 None
2024-10-28 00:38:57,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/33cf0eb27577cdf0651aa994cfd52add56f49459/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-28 00:38:57,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/33cf0eb27577cdf0651aa994cfd52add56f49459/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-28 00:38:58,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/33cf0eb27577cdf0651aa994cfd52add56f49459 HTTP/1.1" 200 None
2024-10-28 00:38:58,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/33cf0eb27577cdf0651aa994cfd52add56f49459?per_page=1 HTTP/1.1" 200 None
2024-10-28 00:38:58,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/33cf0eb27577cdf0651aa994cfd52add56f49459 HTTP/1.1" 200 None
2024-10-28 00:38:59,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/33cf0eb27577cdf0651aa994cfd52add56f49459/status HTTP/1.1" 200 None
2024-10-28 00:38:59,318 [ scc.repo] DEBUG - PR 589 knabar 'Remove Python 2 compatibility import'
2024-10-28 00:38:59,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/585 HTTP/1.1" 200 None
2024-10-28 00:39:00,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583 HTTP/1.1" 200 None
2024-10-28 00:39:00,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583/comments HTTP/1.1" 200 None
2024-10-28 00:39:01,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-28 00:39:01,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-28 00:39:02,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-28 00:39:02,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-28 00:39:03,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/aa50f469842b9687c74df8765d72241e6e37d32c?per_page=1 HTTP/1.1" 200 None
2024-10-28 00:39:03,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-28 00:39:04,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/status HTTP/1.1" 200 None
2024-10-28 00:39:04,062 [ scc.repo] DEBUG - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-28 00:39:04,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581 HTTP/1.1" 200 None
2024-10-28 00:39:04,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581/comments HTTP/1.1" 200 None
2024-10-28 00:39:05,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/580 HTTP/1.1" 200 None
2024-10-28 00:39:05,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-28 00:39:06,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-28 00:39:06,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-28 00:39:07,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-28 00:39:07,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc?per_page=1 HTTP/1.1" 200 None
2024-10-28 00:39:08,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-28 00:39:08,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/status HTTP/1.1" 200 None
2024-10-28 00:39:08,664 [ scc.repo] DEBUG - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-28 00:39:09,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-10-28 00:39:09,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-10-28 00:39:10,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-10-28 00:39:10,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-10-28 00:39:11,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-28 00:39:11,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-28 00:39:11,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-28 00:39:12,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-28 00:39:12,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-10-28 00:39:13,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-28 00:39:13,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-10-28 00:39:13,667 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-28 00:39:14,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-10-28 00:39:14,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-10-28 00:39:15,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-28 00:39:15,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-28 00:39:15,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-28 00:39:16,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-28 00:39:16,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-10-28 00:39:17,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-28 00:39:17,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-10-28 00:39:17,755 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-28 00:39:18,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-10-28 00:39:18,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-10-28 00:39:19,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-10-28 00:39:19,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-28 00:39:20,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-28 00:39:20,079 [ scc.repo] DEBUG ## Branches found:
2024-10-28 00:39:20,079 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-28 00:39:20,080 [ scc.git] DEBUG Get sha1 of %s
2024-10-28 00:39:20,080 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:39:20,085 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-28 00:39:20,090 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-28 00:39:20,090 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-28 00:39:20,163 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-28 00:39:20,168 [ scc.git] DEBUG Already up to date.
2024-10-28 00:39:20,168 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-10-28 00:39:21,701 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-28 00:39:21,701 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-10-28 00:39:21,706 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-10-28 00:39:22,026 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-28 00:39:22,027 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-10-28 00:39:22,031 [ scc.git] DEBUG Calling 'git fetch origin pull/580/head'
2024-10-28 00:39:22,431 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-28 00:39:22,431 [ scc.git] DEBUG * branch refs/pull/580/head -> FETCH_HEAD
2024-10-28 00:39:22,435 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head'
2024-10-28 00:39:22,797 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-28 00:39:22,797 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD
2024-10-28 00:39:22,802 [ scc.git] DEBUG Calling 'git fetch origin pull/589/head'
2024-10-28 00:39:23,163 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-28 00:39:23,164 [ scc.git] DEBUG * branch refs/pull/589/head -> FETCH_HEAD
2024-10-28 00:39:23,168 [ scc.git] DEBUG ## Unique users: []
2024-10-28 00:39:23,168 [ scc.git] DEBUG Get sha1 of %s
2024-10-28 00:39:23,168 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:39:23,173 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-28 00:39:23,180 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:39:23,183 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-28 00:39:23,382 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-10-28 00:39:23,382 [ scc.git] DEBUG Auto-merging setup.py
2024-10-28 00:39:23,384 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-28 00:39:23,388 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-10-28 00:39:23,388 [ scc.git] DEBUG setup.py | 1 +
2024-10-28 00:39:23,388 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-10-28 00:39:23,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:39:23,519 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-28 00:39:23,527 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:39:23,531 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-28 00:39:23,837 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-10-28 00:39:23,837 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-10-28 00:39:23,838 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-28 00:39:23,842 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-10-28 00:39:23,842 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-10-28 00:39:23,842 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-10-28 00:39:24,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:39:24,007 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-28 00:39:24,016 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:39:24,020 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 580 (omeroweb.webgateway.obj_id_bitmask: handle empty query results) 1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-28 00:39:24,118 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-28 00:39:24,122 [ scc.git] DEBUG omeroweb/webgateway/views.py | 6 ++++++
2024-10-28 00:39:24,122 [ scc.git] DEBUG 1 file changed, 6 insertions(+)
2024-10-28 00:39:24,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:39:24,438 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-28 00:39:24,446 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:39:24,449 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Allow users to click a group name to show data from all users in that group) aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-28 00:39:24,526 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-28 00:39:24,530 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_content.html | 6 +++++-
2024-10-28 00:39:24,530 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_dropdown2.html | 2 --
2024-10-28 00:39:24,530 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 3 deletions(-)
2024-10-28 00:39:24,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:39:24,863 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...33cf0eb27577cdf0651aa994cfd52add56f49459'
2024-10-28 00:39:24,871 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:39:24,875 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 589 (Remove Python 2 compatibility import) 33cf0eb27577cdf0651aa994cfd52add56f49459'
2024-10-28 00:39:24,906 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-28 00:39:24,909 [ scc.git] DEBUG omeroweb/urls.py | 4 ++--
2024-10-28 00:39:24,909 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-)
2024-10-28 00:39:25,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:39:25,254 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-28 00:39:25,293 [ scc.git] DEBUG Get sha1 of %s
2024-10-28 00:39:25,293 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-28 00:39:25,298 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-28 00:39:25,336 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-28 00:39:25,346 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f812a6bcfa0> has no local changes
2024-10-28 00:39:25,346 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
- PR 589 knabar 'Remove Python 2 compatibility import'
Generated by OMERO-python-superbuild-push#216 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/216/)'
2024-10-28 00:39:25,356 [ scc.git] DEBUG [detached HEAD d499f610d] merge master -Dorg -Ssuccess-only
2024-10-28 00:39:25,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-28 00:39:25,356 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-28 00:39:25,406 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-10-28 00:39:25,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:39:25,657 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-10-28 00:39:26,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:39:26,034 [ scc.config] DEBUG Found submodule.omero-py.url
2024-10-28 00:39:26,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:39:26,426 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-10-28 00:39:26,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:39:26,806 [ scc.config] DEBUG Found submodule.omero-web.url
2024-10-28 00:39:27,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-28 00:39:27,184 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-28 00:39:27,210 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f812cce78b0> has local changes
2024-10-28 00:39:27,211 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
- PR 589 knabar 'Remove Python 2 compatibility import'
Generated by OMERO-python-superbuild-push#216 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/216/)'
2024-10-28 00:39:27,219 [ scc.git] DEBUG [detached HEAD 63eb33d] merge master -Dorg -Ssuccess-only
2024-10-28 00:39:27,219 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-28 00:39:27,219 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-10-28 00:39:27,220 [ scc.merge] INFO Already up to date.
2024-10-28 00:39:27,220 [ scc.merge] INFO
2024-10-28 00:39:27,220 [ scc.merge] INFO Merged PRs:
2024-10-28 00:39:27,220 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-28 00:39:27,220 [ scc.merge] INFO
2024-10-28 00:39:27,220 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-10-28 00:39:27,220 [ scc.merge] INFO Already up to date.
2024-10-28 00:39:27,220 [ scc.merge] INFO
2024-10-28 00:39:27,220 [ scc.merge] INFO Merged PRs:
2024-10-28 00:39:27,220 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-28 00:39:27,220 [ scc.merge] INFO
2024-10-28 00:39:27,220 [ scc.merge] INFO Repository: ome/omero-marshal
2024-10-28 00:39:27,220 [ scc.merge] INFO Excluded PRs:
2024-10-28 00:39:27,220 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-10-28 00:39:27,220 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-10-28 00:39:27,220 [ scc.merge] INFO Already up to date.
2024-10-28 00:39:27,220 [ scc.merge] INFO
2024-10-28 00:39:27,220 [ scc.merge] INFO Merged PRs:
2024-10-28 00:39:27,220 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-28 00:39:27,220 [ scc.merge] INFO
2024-10-28 00:39:27,220 [ scc.merge] INFO Repository: ome/omero-py
2024-10-28 00:39:27,220 [ scc.merge] INFO Excluded PRs:
2024-10-28 00:39:27,220 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
2024-10-28 00:39:27,220 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-10-28 00:39:27,220 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-10-28 00:39:27,220 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-10-28 00:39:27,220 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-10-28 00:39:27,220 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-10-28 00:39:27,220 [ scc.merge] INFO Already up to date.
2024-10-28 00:39:27,220 [ scc.merge] INFO
2024-10-28 00:39:27,220 [ scc.merge] INFO Merged PRs:
2024-10-28 00:39:27,221 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-10-28 00:39:27,221 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-28 00:39:27,221 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-28 00:39:27,221 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-28 00:39:27,221 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-10-28 00:39:27,221 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-28 00:39:27,221 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-10-28 00:39:27,221 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-10-28 00:39:27,221 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation'
2024-10-28 00:39:27,221 [ scc.merge] INFO - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-28 00:39:27,221 [ scc.merge] INFO
2024-10-28 00:39:27,221 [ scc.merge] INFO Repository: ome/omero-scripts
2024-10-28 00:39:27,221 [ scc.merge] INFO Excluded PRs:
2024-10-28 00:39:27,221 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-10-28 00:39:27,221 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-10-28 00:39:27,221 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-10-28 00:39:27,221 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-10-28 00:39:27,221 [ scc.merge] INFO Already up to date.
2024-10-28 00:39:27,221 [ scc.merge] INFO
2024-10-28 00:39:27,221 [ scc.merge] INFO Merged PRs:
2024-10-28 00:39:27,221 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-28 00:39:27,221 [ scc.merge] INFO
2024-10-28 00:39:27,221 [ scc.merge] INFO Conflicting PRs (not included):
2024-10-28 00:39:27,221 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-28 00:39:27,221 [ scc.merge] INFO
2024-10-28 00:39:27,221 [ scc.merge] INFO Repository: ome/omero-web
2024-10-28 00:39:27,221 [ scc.merge] INFO Excluded PRs:
2024-10-28 00:39:27,221 [ scc.merge] INFO - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-10-28 00:39:27,221 [ scc.merge] INFO - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
2024-10-28 00:39:27,221 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-10-28 00:39:27,221 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-10-28 00:39:27,221 [ scc.merge] INFO Already up to date.
2024-10-28 00:39:27,221 [ scc.merge] INFO
2024-10-28 00:39:27,221 [ scc.merge] INFO Merged PRs:
2024-10-28 00:39:27,221 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-28 00:39:27,221 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-28 00:39:27,221 [ scc.merge] INFO - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-28 00:39:27,222 [ scc.merge] INFO - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-28 00:39:27,222 [ scc.merge] INFO - PR 589 knabar 'Remove Python 2 compatibility import'
2024-10-28 00:39:27,222 [ scc.merge] INFO
2024-10-28 00:39:27,222 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-28 00:39:27,222 [ scc.git] DEBUG Calling 'git remote'
2024-10-28 00:39:27,225 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-28 00:39:27,225 [ scc.git] DEBUG Calling 'git remote'
2024-10-28 00:39:27,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-28 00:39:27,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-28 00:39:27,230 [ scc.git] DEBUG Calling 'git remote'
2024-10-28 00:39:27,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-28 00:39:27,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-28 00:39:27,234 [ scc.git] DEBUG Calling 'git remote'
2024-10-28 00:39:27,237 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-28 00:39:27,237 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-28 00:39:27,237 [ scc.git] DEBUG Calling 'git remote'
2024-10-28 00:39:27,241 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-28 00:39:27,241 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-28 00:39:27,241 [ scc.git] DEBUG Calling 'git remote'
2024-10-28 00:39:27,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 4fd72efa
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from da5b7d11f
nothing to commit, working tree clean
HEAD detached from e849d72
nothing to commit, working tree clean
2024-10-28 00:39:53,903 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
![[Jenkins]](/jenkins/static/f6f303f9/images/svgs/logo.svg){kind=logo}
