Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-11-04 00:32:21,987 [ scc.config] DEBUG Found github.token
2024-11-04 00:32:21,990 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-11-04 00:32:22,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:32:22,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:32:22,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-11-04 00:32:22,974 [ scc.gh] DEBUG 4621 remaining from 5000 (Reset at 01:11
2024-11-04 00:32:22,974 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-11-04 00:32:22,979 [ scc.git] DEBUG Check current status
2024-11-04 00:32:22,979 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-11-04 00:32:22,982 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-11-04 00:32:22,982 [ scc.git] DEBUG Calling 'git submodule status'
2024-11-04 00:32:23,023 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-11-04 00:32:23,026 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-11-04 00:32:23,029 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-11-04 00:32:23,032 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-11-04 00:32:23,036 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-11-04 00:32:23,041 [ scc.config] DEBUG Found remote.origin.url
2024-11-04 00:32:23,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-11-04 00:32:23,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-11-04 00:32:24,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-11-04 00:32:24,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-11-04 00:32:25,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-11-04 00:32:25,089 [ scc.git] DEBUG Resetting...
2024-11-04 00:32:25,089 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-11-04 00:32:25,094 [ scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-11-04 00:32:25,095 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-11-04 00:32:25,142 [ scc.git] DEBUG Check current status
2024-11-04 00:32:25,143 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-11-04 00:32:25,146 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-11-04 00:32:25,146 [ scc.git] DEBUG Calling 'git submodule status'
2024-11-04 00:32:25,180 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-11-04 00:32:25,183 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-11-04 00:32:25,186 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-11-04 00:32:25,190 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-11-04 00:32:25,193 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-11-04 00:32:25,193 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-11-04 00:32:25,193 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-11-04 00:32:25,193 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-11-04 00:32:25,193 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-11-04 00:32:25,193 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-11-04 00:32:25,194 [ scc.repo] DEBUG ## PRs found:
2024-11-04 00:32:25,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-11-04 00:32:26,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-11-04 00:32:26,001 [ scc.repo] DEBUG # ... Include label: dependencies
2024-11-04 00:32:26,001 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-11-04 00:32:26,001 [ scc.repo] DEBUG ## Branches found:
2024-11-04 00:32:26,002 [ scc.git] DEBUG Get sha1 of %s
2024-11-04 00:32:26,002 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:32:26,005 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-04 00:32:26,009 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-04 00:32:26,009 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-04 00:32:26,012 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-04 00:32:26,016 [ scc.git] DEBUG Already up to date.
2024-11-04 00:32:26,016 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-11-04 00:32:26,325 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-11-04 00:32:26,325 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-11-04 00:32:26,330 [ scc.git] DEBUG ## Unique users: []
2024-11-04 00:32:26,330 [ scc.git] DEBUG Get sha1 of %s
2024-11-04 00:32:26,330 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:32:26,334 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-11-04 00:32:26,337 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:32:26,340 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-11-04 00:32:26,349 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-04 00:32:26,351 [ scc.git] DEBUG omero-py | 2 +-
2024-11-04 00:32:26,351 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-11-04 00:32:26,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:32:26,478 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-04 00:32:26,529 [ scc.git] DEBUG Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba'
2024-11-04 00:32:26,530 [ scc.git] DEBUG Get sha1 of %s
2024-11-04 00:32:26,530 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:32:26,533 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-04 00:32:26,690 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f43ba50bfd0> has no local changes
2024-11-04 00:32:26,691 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Generated by OMERO-python-superbuild-push#221 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/221/)'
2024-11-04 00:32:26,718 [ scc.git] DEBUG [detached HEAD ee53d4a] merge master -Dorg -Snone
2024-11-04 00:32:26,719 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-11-04 00:32:26,719 [ scc.merge] INFO Already up to date.
2024-11-04 00:32:26,719 [ scc.merge] INFO
2024-11-04 00:32:26,719 [ scc.merge] INFO Merged PRs:
2024-11-04 00:32:26,719 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-11-04 00:32:26,719 [ scc.merge] INFO
2024-11-04 00:32:26,719 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-11-04 00:32:26,719 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Submodule path 'omero-web': checked out '213bb61adc23aed4a750f2a83dc94b7efdb22cee'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-11-04 00:32:28,782 [ scc.config] DEBUG Found github.token
2024-11-04 00:32:28,785 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-11-04 00:32:28,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:32:29,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:32:29,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-11-04 00:32:29,720 [ scc.gh] DEBUG 4611 remaining from 5000 (Reset at 01:11
2024-11-04 00:32:29,721 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-11-04 00:32:29,724 [ scc.git] DEBUG Check current status
2024-11-04 00:32:29,725 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-11-04 00:32:29,728 [ scc.git] DEBUG ee53d4a merge master -Dorg -Snone
2024-11-04 00:32:29,728 [ scc.git] DEBUG Calling 'git submodule status'
2024-11-04 00:32:29,765 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-11-04 00:32:29,767 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-11-04 00:32:29,770 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-11-04 00:32:29,774 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-11-04 00:32:29,777 [ scc.git] DEBUG +213bb61adc23aed4a750f2a83dc94b7efdb22cee omero-web (v5.27.2-7-g213bb61ad)
2024-11-04 00:32:29,781 [ scc.config] DEBUG Found remote.origin.url
2024-11-04 00:32:29,781 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-11-04 00:32:29,782 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-11-04 00:32:30,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-11-04 00:32:30,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-11-04 00:32:31,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-11-04 00:32:31,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-11-04 00:32:31,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-11-04 00:32:31,874 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-04 00:32:31,917 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-11-04 00:32:31,917 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-11-04 00:32:31,921 [ scc.git] DEBUG Check current status
2024-11-04 00:32:31,921 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-11-04 00:32:31,924 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-11-04 00:32:31,924 [ scc.git] DEBUG Calling 'git submodule status'
2024-11-04 00:32:31,960 [ scc.config] DEBUG Found remote.origin.url
2024-11-04 00:32:32,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-11-04 00:32:32,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-11-04 00:32:33,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-11-04 00:32:33,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-11-04 00:32:33,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-11-04 00:32:33,985 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-04 00:32:34,023 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-04 00:32:34,024 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-11-04 00:32:34,024 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-11-04 00:32:34,028 [ scc.git] DEBUG Check current status
2024-11-04 00:32:34,028 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-11-04 00:32:34,032 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-11-04 00:32:34,032 [ scc.git] DEBUG Calling 'git submodule status'
2024-11-04 00:32:34,070 [ scc.config] DEBUG Found remote.origin.url
2024-11-04 00:32:34,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-11-04 00:32:34,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-11-04 00:32:35,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-11-04 00:32:35,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-11-04 00:32:36,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-11-04 00:32:36,103 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-04 00:32:36,140 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-04 00:32:36,141 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-11-04 00:32:36,141 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-11-04 00:32:36,145 [ scc.git] DEBUG Check current status
2024-11-04 00:32:36,145 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-11-04 00:32:36,148 [ scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0
2024-11-04 00:32:36,149 [ scc.git] DEBUG Calling 'git submodule status'
2024-11-04 00:32:36,188 [ scc.config] DEBUG Found remote.origin.url
2024-11-04 00:32:36,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-11-04 00:32:36,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-11-04 00:32:37,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-11-04 00:32:37,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-11-04 00:32:38,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-11-04 00:32:38,227 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-04 00:32:38,264 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-04 00:32:38,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-11-04 00:32:38,265 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-11-04 00:32:38,269 [ scc.git] DEBUG Check current status
2024-11-04 00:32:38,270 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-11-04 00:32:38,329 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-11-04 00:32:38,329 [ scc.git] DEBUG Calling 'git submodule status'
2024-11-04 00:32:38,369 [ scc.config] DEBUG Found remote.origin.url
2024-11-04 00:32:38,370 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-11-04 00:32:38,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-11-04 00:32:39,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-11-04 00:32:39,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-11-04 00:32:39,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-11-04 00:32:40,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-11-04 00:32:40,346 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-04 00:32:40,383 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-04 00:32:40,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-11-04 00:32:40,384 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-11-04 00:32:40,388 [ scc.git] DEBUG Check current status
2024-11-04 00:32:40,388 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-11-04 00:32:40,392 [ scc.git] DEBUG 213bb61ad Merge pull request #580 from sbesson/obj_id_mask_no_match
2024-11-04 00:32:40,392 [ scc.git] DEBUG Calling 'git submodule status'
2024-11-04 00:32:40,432 [ scc.config] DEBUG Found remote.origin.url
2024-11-04 00:32:40,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-11-04 00:32:41,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-11-04 00:32:41,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-11-04 00:32:42,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-11-04 00:32:42,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-11-04 00:32:42,466 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-04 00:32:42,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-04 00:32:42,505 [ scc.git] DEBUG Resetting...
2024-11-04 00:32:42,505 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-11-04 00:32:42,512 [ scc.git] DEBUG HEAD is now at ee53d4a merge master -Dorg -Snone
2024-11-04 00:32:42,512 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-11-04 00:32:42,574 [ scc.git] DEBUG Submodule path 'omero-web': checked out 'da5b7d11f5375f024d3881db2dcc63899b4087da'
2024-11-04 00:32:42,577 [ scc.git] DEBUG Check current status
2024-11-04 00:32:42,577 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-11-04 00:32:42,582 [ scc.git] DEBUG ee53d4a merge master -Dorg -Snone
2024-11-04 00:32:42,583 [ scc.git] DEBUG Calling 'git submodule status'
2024-11-04 00:32:42,622 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-11-04 00:32:42,625 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-11-04 00:32:42,628 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-11-04 00:32:42,632 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-11-04 00:32:42,635 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-11-04 00:32:42,636 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-11-04 00:32:42,636 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-11-04 00:32:42,636 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-11-04 00:32:42,636 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-11-04 00:32:42,636 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-11-04 00:32:42,636 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-11-04 00:32:42,637 [ scc.repo] DEBUG ## PRs found:
2024-11-04 00:32:42,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-11-04 00:32:43,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-11-04 00:32:43,403 [ scc.repo] DEBUG # ... Include label: dependencies
2024-11-04 00:32:43,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-11-04 00:32:44,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-04 00:32:44,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-11-04 00:32:45,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/9660559833988d271074de56e54f2462a7be74e9?per_page=1 HTTP/1.1" 200 2
2024-11-04 00:32:45,259 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-11-04 00:32:45,259 [ scc.repo] DEBUG ## Branches found:
2024-11-04 00:32:45,259 [ scc.git] DEBUG Get sha1 of %s
2024-11-04 00:32:45,259 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:32:45,264 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-04 00:32:45,268 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-04 00:32:45,268 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-04 00:32:45,272 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-04 00:32:45,278 [ scc.git] DEBUG Already up to date.
2024-11-04 00:32:45,278 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-11-04 00:32:45,574 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-11-04 00:32:45,575 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-11-04 00:32:45,579 [ scc.git] DEBUG ## Unique users: []
2024-11-04 00:32:45,579 [ scc.git] DEBUG Get sha1 of %s
2024-11-04 00:32:45,579 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:32:45,583 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-11-04 00:32:45,587 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:32:45,590 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-11-04 00:32:45,594 [ scc.git] DEBUG Already up to date.
2024-11-04 00:32:45,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:32:45,731 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-04 00:32:45,768 [ scc.git] DEBUG Get sha1 of %s
2024-11-04 00:32:45,768 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:32:45,772 [ scc.repo] DEBUG ## PRs found:
2024-11-04 00:32:46,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-11-04 00:32:46,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-11-04 00:32:47,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-11-04 00:32:47,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-11-04 00:32:48,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-04 00:32:48,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-11-04 00:32:48,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-11-04 00:32:48,986 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-11-04 00:32:48,986 [ scc.repo] DEBUG ## Branches found:
2024-11-04 00:32:48,986 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-11-04 00:32:48,986 [ scc.git] DEBUG Get sha1 of %s
2024-11-04 00:32:48,986 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:32:48,991 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-04 00:32:48,994 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-04 00:32:48,995 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-04 00:32:48,998 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-04 00:32:49,002 [ scc.git] DEBUG Already up to date.
2024-11-04 00:32:49,002 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-11-04 00:32:49,361 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-11-04 00:32:49,361 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-11-04 00:32:49,366 [ scc.git] DEBUG ## Unique users: []
2024-11-04 00:32:49,366 [ scc.git] DEBUG Get sha1 of %s
2024-11-04 00:32:49,366 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:32:49,370 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-11-04 00:32:49,375 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:32:49,378 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-11-04 00:32:49,900 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-11-04 00:32:49,900 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-11-04 00:32:49,900 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-11-04 00:32:49,900 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-11-04 00:32:49,900 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-11-04 00:32:49,900 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-11-04 00:32:49,900 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-11-04 00:32:49,900 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-11-04 00:32:49,900 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-11-04 00:32:49,901 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-04 00:32:49,905 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-11-04 00:32:49,905 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-11-04 00:32:49,905 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-11-04 00:32:49,905 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-11-04 00:32:49,905 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-11-04 00:32:49,905 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-11-04 00:32:49,905 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-11-04 00:32:49,905 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-11-04 00:32:49,905 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-11-04 00:32:49,905 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-11-04 00:32:50,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:32:50,033 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-04 00:32:50,069 [ scc.git] DEBUG Get sha1 of %s
2024-11-04 00:32:50,069 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:32:50,072 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-04 00:32:50,106 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-04 00:32:50,111 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5042edf790> has no local changes
2024-11-04 00:32:50,111 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#221 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/221/)'
2024-11-04 00:32:50,135 [ scc.git] DEBUG [detached HEAD 95f1524] merge master -Dorg -Ssuccess-only
2024-11-04 00:32:50,135 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-04 00:32:50,135 [ scc.repo] DEBUG ## PRs found:
2024-11-04 00:32:50,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-11-04 00:32:50,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-11-04 00:32:51,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-11-04 00:32:51,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-11-04 00:32:52,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-04 00:32:52,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-11-04 00:32:53,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-11-04 00:32:53,177 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-11-04 00:32:53,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-11-04 00:32:54,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-11-04 00:32:54,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-11-04 00:32:55,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-11-04 00:32:55,017 [ scc.repo] DEBUG ## Branches found:
2024-11-04 00:32:55,018 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-11-04 00:32:55,018 [ scc.git] DEBUG Get sha1 of %s
2024-11-04 00:32:55,018 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:32:55,022 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-04 00:32:55,027 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-04 00:32:55,027 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-04 00:32:55,031 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-04 00:32:55,035 [ scc.git] DEBUG Already up to date.
2024-11-04 00:32:55,035 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-11-04 00:32:55,709 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-11-04 00:32:55,709 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-11-04 00:32:55,713 [ scc.git] DEBUG ## Unique users: []
2024-11-04 00:32:55,714 [ scc.git] DEBUG Get sha1 of %s
2024-11-04 00:32:55,714 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:32:55,718 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-11-04 00:32:55,722 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:32:55,725 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-11-04 00:32:55,734 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-11-04 00:32:55,735 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-04 00:32:55,738 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-11-04 00:32:55,738 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-11-04 00:32:55,738 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-11-04 00:32:55,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:32:55,871 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-04 00:32:55,908 [ scc.git] DEBUG Get sha1 of %s
2024-11-04 00:32:55,909 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:32:55,912 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-04 00:32:55,946 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-04 00:32:55,951 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5042f14730> has no local changes
2024-11-04 00:32:55,951 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#221 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/221/)'
2024-11-04 00:32:55,958 [ scc.git] DEBUG [detached HEAD d654d5a] merge master -Dorg -Ssuccess-only
2024-11-04 00:32:55,959 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-04 00:32:55,959 [ scc.repo] DEBUG ## PRs found:
2024-11-04 00:32:56,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-11-04 00:32:57,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/431 HTTP/1.1" 200 None
2024-11-04 00:32:57,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-11-04 00:32:58,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-04 00:32:58,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-04 00:32:59,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-11-04 00:32:59,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0e500ec05bf9227b66b28a480b40e0936241d953?per_page=1 HTTP/1.1" 200 None
2024-11-04 00:32:59,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-11-04 00:33:00,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/status HTTP/1.1" 200 None
2024-11-04 00:33:00,415 [ scc.repo] DEBUG - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-11-04 00:33:00,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None
2024-11-04 00:33:01,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None
2024-11-04 00:33:01,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None
2024-11-04 00:33:01,789 [ scc.repo] DEBUG # ... Include label: include
2024-11-04 00:33:02,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-11-04 00:33:02,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-04 00:33:03,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-04 00:33:03,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-11-04 00:33:04,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1?per_page=1 HTTP/1.1" 200 None
2024-11-04 00:33:04,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-11-04 00:33:04,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/status HTTP/1.1" 200 None
2024-11-04 00:33:04,904 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation'
2024-11-04 00:33:05,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-11-04 00:33:05,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-11-04 00:33:06,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-11-04 00:33:06,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-04 00:33:07,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-04 00:33:07,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-11-04 00:33:08,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-11-04 00:33:08,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-11-04 00:33:09,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-11-04 00:33:09,014 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-11-04 00:33:09,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-11-04 00:33:09,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-11-04 00:33:10,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-11-04 00:33:10,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-04 00:33:11,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-04 00:33:11,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-11-04 00:33:12,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-11-04 00:33:12,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-04 00:33:13,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-04 00:33:13,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-11-04 00:33:14,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-11-04 00:33:14,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-11-04 00:33:15,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-11-04 00:33:15,011 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-11-04 00:33:15,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-11-04 00:33:15,500 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-11-04 00:33:15,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-11-04 00:33:16,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-11-04 00:33:16,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-11-04 00:33:17,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-04 00:33:17,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-11-04 00:33:18,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-11-04 00:33:18,284 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-11-04 00:33:18,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-11-04 00:33:19,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-11-04 00:33:19,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-11-04 00:33:20,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-04 00:33:20,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-04 00:33:21,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-11-04 00:33:21,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-11-04 00:33:22,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-11-04 00:33:22,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-11-04 00:33:22,441 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-11-04 00:33:22,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-11-04 00:33:23,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-11-04 00:33:23,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-11-04 00:33:24,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-11-04 00:33:24,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-11-04 00:33:25,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-04 00:33:25,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-11-04 00:33:26,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-11-04 00:33:26,576 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-11-04 00:33:27,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-11-04 00:33:27,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-11-04 00:33:27,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-04 00:33:28,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-11-04 00:33:28,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-11-04 00:33:28,889 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-11-04 00:33:29,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-11-04 00:33:29,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-11-04 00:33:30,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-11-04 00:33:30,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-04 00:33:31,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-11-04 00:33:31,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-11-04 00:33:31,742 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-11-04 00:33:32,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-11-04 00:33:32,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-11-04 00:33:33,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-11-04 00:33:33,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-04 00:33:34,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-11-04 00:33:34,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-11-04 00:33:34,568 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-11-04 00:33:35,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-11-04 00:33:35,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-11-04 00:33:35,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-11-04 00:33:36,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-11-04 00:33:36,432 [ scc.repo] DEBUG ## Branches found:
2024-11-04 00:33:36,432 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-11-04 00:33:36,432 [ scc.git] DEBUG Get sha1 of %s
2024-11-04 00:33:36,432 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:33:36,437 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-04 00:33:36,440 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-04 00:33:36,441 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-04 00:33:36,445 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-04 00:33:36,449 [ scc.git] DEBUG Already up to date.
2024-11-04 00:33:36,449 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-11-04 00:33:38,373 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-11-04 00:33:38,373 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-11-04 00:33:38,379 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-11-04 00:33:38,814 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-11-04 00:33:38,815 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-11-04 00:33:38,819 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-11-04 00:33:39,100 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-11-04 00:33:39,100 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-11-04 00:33:39,105 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-11-04 00:33:39,440 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-11-04 00:33:39,440 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-11-04 00:33:39,445 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-11-04 00:33:39,721 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-11-04 00:33:39,721 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-11-04 00:33:39,725 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-11-04 00:33:40,006 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-11-04 00:33:40,007 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-11-04 00:33:40,011 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-11-04 00:33:40,290 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-11-04 00:33:40,291 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-11-04 00:33:40,295 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-11-04 00:33:40,572 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-11-04 00:33:40,572 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-11-04 00:33:40,577 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2024-11-04 00:33:40,863 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-11-04 00:33:40,863 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD
2024-11-04 00:33:40,868 [ scc.git] DEBUG Calling 'git fetch origin pull/431/head'
2024-11-04 00:33:41,166 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-11-04 00:33:41,166 [ scc.git] DEBUG * branch refs/pull/431/head -> FETCH_HEAD
2024-11-04 00:33:41,170 [ scc.git] DEBUG ## Unique users: []
2024-11-04 00:33:41,171 [ scc.git] DEBUG Get sha1 of %s
2024-11-04 00:33:41,171 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:33:41,175 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-11-04 00:33:41,185 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:33:41,189 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-11-04 00:33:41,209 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-11-04 00:33:41,209 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-11-04 00:33:41,210 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-04 00:33:41,213 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-11-04 00:33:41,213 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-11-04 00:33:41,213 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-11-04 00:33:41,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:33:41,343 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-11-04 00:33:41,355 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:33:41,358 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-11-04 00:33:41,596 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-11-04 00:33:41,596 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-11-04 00:33:41,616 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-04 00:33:41,623 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-11-04 00:33:41,623 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-11-04 00:33:41,623 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-11-04 00:33:41,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:33:41,767 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-11-04 00:33:41,779 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:33:41,782 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-11-04 00:33:41,849 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-11-04 00:33:41,850 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-04 00:33:41,853 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-11-04 00:33:41,853 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-11-04 00:33:42,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:33:42,153 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-11-04 00:33:42,165 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:33:42,168 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-11-04 00:33:42,188 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-11-04 00:33:42,188 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-11-04 00:33:42,189 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-04 00:33:42,191 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-11-04 00:33:42,192 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-11-04 00:33:42,192 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-11-04 00:33:42,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:33:42,529 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-11-04 00:33:42,541 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:33:42,545 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-11-04 00:33:42,630 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-04 00:33:42,633 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-11-04 00:33:42,633 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-11-04 00:33:42,633 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-11-04 00:33:42,633 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-11-04 00:33:42,633 [ scc.git] DEBUG create mode 100644 connect.py
2024-11-04 00:33:42,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:33:42,915 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-11-04 00:33:42,927 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:33:42,930 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-11-04 00:33:42,948 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-11-04 00:33:42,963 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-04 00:33:42,966 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-11-04 00:33:42,966 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-11-04 00:33:43,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:33:43,296 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-11-04 00:33:43,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:33:43,312 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-11-04 00:33:43,457 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-11-04 00:33:43,458 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-04 00:33:43,462 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-11-04 00:33:43,462 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-11-04 00:33:43,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:33:43,680 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-11-04 00:33:43,691 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:33:43,695 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-11-04 00:33:43,726 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-11-04 00:33:43,744 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-04 00:33:43,751 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-11-04 00:33:43,751 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-11-04 00:33:44,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:33:44,068 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-11-04 00:33:44,079 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:33:44,083 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-11-04 00:33:44,120 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-04 00:33:44,123 [ scc.git] DEBUG .gitignore | 1 +
2024-11-04 00:33:44,123 [ scc.git] DEBUG src/omero/plugins/download.py | 17 ++++++++++++-----
2024-11-04 00:33:44,123 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 5 deletions(-)
2024-11-04 00:33:44,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:33:44,455 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0e500ec05bf9227b66b28a480b40e0936241d953'
2024-11-04 00:33:44,469 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:33:44,473 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 431 (omero.HdfStorage.update: add size check on data.rowNumbers) 0e500ec05bf9227b66b28a480b40e0936241d953'
2024-11-04 00:33:44,490 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-04 00:33:44,493 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 1 +
2024-11-04 00:33:44,493 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2024-11-04 00:33:44,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:33:44,835 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-04 00:33:44,873 [ scc.git] DEBUG Get sha1 of %s
2024-11-04 00:33:44,873 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:33:44,877 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-04 00:33:44,912 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-04 00:33:44,919 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5041e81c70> has no local changes
2024-11-04 00:33:44,919 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Generated by OMERO-python-superbuild-push#221 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/221/)'
2024-11-04 00:33:44,927 [ scc.git] DEBUG [detached HEAD 78651f6c] merge master -Dorg -Ssuccess-only
2024-11-04 00:33:44,927 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-04 00:33:44,927 [ scc.git] INFO Overriding base-branch from master to develop
2024-11-04 00:33:44,927 [ scc.repo] DEBUG ## PRs found:
2024-11-04 00:33:45,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-11-04 00:33:45,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-11-04 00:33:46,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2024-11-04 00:33:46,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-11-04 00:33:47,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-04 00:33:47,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-04 00:33:48,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-11-04 00:33:48,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-11-04 00:33:48,745 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-11-04 00:33:49,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-11-04 00:33:49,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-11-04 00:33:50,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-11-04 00:33:50,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-11-04 00:33:51,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-11-04 00:33:51,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-11-04 00:33:52,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-11-04 00:33:52,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-04 00:33:53,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-11-04 00:33:53,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-11-04 00:33:53,443 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-11-04 00:33:53,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-11-04 00:33:54,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-11-04 00:33:54,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-11-04 00:33:55,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-11-04 00:33:55,293 [ scc.repo] DEBUG ## Branches found:
2024-11-04 00:33:55,293 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-11-04 00:33:55,293 [ scc.git] DEBUG Get sha1 of %s
2024-11-04 00:33:55,293 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:33:55,298 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-11-04 00:33:55,302 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-04 00:33:55,302 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-11-04 00:33:55,306 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-11-04 00:33:55,310 [ scc.git] DEBUG Already up to date.
2024-11-04 00:33:55,310 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-11-04 00:33:55,609 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-11-04 00:33:55,609 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-11-04 00:33:55,613 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-11-04 00:33:56,102 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-11-04 00:33:56,103 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-11-04 00:33:56,107 [ scc.git] DEBUG ## Unique users: []
2024-11-04 00:33:56,108 [ scc.git] DEBUG Get sha1 of %s
2024-11-04 00:33:56,108 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:33:56,112 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-11-04 00:33:56,118 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:33:56,121 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-11-04 00:33:56,130 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-11-04 00:33:56,131 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-11-04 00:33:56,131 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-11-04 00:33:56,131 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-11-04 00:33:56,135 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-11-04 00:33:56,139 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-11-04 00:33:56,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:33:56,282 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-11-04 00:33:56,289 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-11-04 00:33:56,293 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#221](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/221/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/221/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-11-04 00:33:56,297 [ scc.config] DEBUG Found github.token
2024-11-04 00:33:56,297 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-11-04 00:33:56,297 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-11-04 00:33:56,301 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:33:56,305 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-11-04 00:33:56,332 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-04 00:33:56,334 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-11-04 00:33:56,334 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-11-04 00:33:56,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:33:56,663 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-04 00:33:56,700 [ scc.git] DEBUG Get sha1 of %s
2024-11-04 00:33:56,700 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:33:56,705 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-04 00:33:56,740 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-04 00:33:56,745 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5041e6fbe0> has no local changes
2024-11-04 00:33:56,745 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#221 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/221/)'
2024-11-04 00:33:56,752 [ scc.git] DEBUG [detached HEAD 52d32f9] merge master -Dorg -Ssuccess-only
2024-11-04 00:33:56,752 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-04 00:33:56,752 [ scc.repo] DEBUG ## PRs found:
2024-11-04 00:33:57,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-11-04 00:33:57,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/590 HTTP/1.1" 200 None
2024-11-04 00:33:58,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b62eb79447919619888bd28ee4e264f7b744f314 HTTP/1.1" 200 None
2024-11-04 00:33:58,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b62eb79447919619888bd28ee4e264f7b744f314/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-04 00:33:59,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b62eb79447919619888bd28ee4e264f7b744f314/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-04 00:33:59,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b62eb79447919619888bd28ee4e264f7b744f314 HTTP/1.1" 200 None
2024-11-04 00:34:00,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b62eb79447919619888bd28ee4e264f7b744f314?per_page=1 HTTP/1.1" 200 None
2024-11-04 00:34:00,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b62eb79447919619888bd28ee4e264f7b744f314 HTTP/1.1" 200 None
2024-11-04 00:34:00,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b62eb79447919619888bd28ee4e264f7b744f314/status HTTP/1.1" 200 None
2024-11-04 00:34:00,868 [ scc.repo] DEBUG - PR 590 knabar 'Update changelog'
2024-11-04 00:34:01,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/585 HTTP/1.1" 200 None
2024-11-04 00:34:01,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583 HTTP/1.1" 200 None
2024-11-04 00:34:02,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583/comments HTTP/1.1" 200 None
2024-11-04 00:34:02,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/dd2879608e047a7d71a648a23e6955ce591950fd HTTP/1.1" 200 None
2024-11-04 00:34:03,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/dd2879608e047a7d71a648a23e6955ce591950fd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-04 00:34:03,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/dd2879608e047a7d71a648a23e6955ce591950fd/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-04 00:34:04,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/dd2879608e047a7d71a648a23e6955ce591950fd HTTP/1.1" 200 None
2024-11-04 00:34:04,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/dd2879608e047a7d71a648a23e6955ce591950fd?per_page=1 HTTP/1.1" 200 None
2024-11-04 00:34:05,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/dd2879608e047a7d71a648a23e6955ce591950fd HTTP/1.1" 200 None
2024-11-04 00:34:05,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/dd2879608e047a7d71a648a23e6955ce591950fd/status HTTP/1.1" 200 None
2024-11-04 00:34:05,500 [ scc.repo] DEBUG - PR 583 DavidStirling 'Allow users to click a group name to quick-switch to that group'
2024-11-04 00:34:05,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581 HTTP/1.1" 200 None
2024-11-04 00:34:06,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581/comments HTTP/1.1" 200 None
2024-11-04 00:34:06,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-11-04 00:34:07,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-11-04 00:34:07,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-11-04 00:34:08,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-11-04 00:34:08,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-11-04 00:34:09,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-04 00:34:09,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-04 00:34:10,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-11-04 00:34:10,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-11-04 00:34:10,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-11-04 00:34:11,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-11-04 00:34:11,414 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-11-04 00:34:11,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-11-04 00:34:12,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-11-04 00:34:12,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-11-04 00:34:13,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-04 00:34:13,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-04 00:34:14,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-11-04 00:34:14,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-11-04 00:34:15,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-11-04 00:34:15,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-11-04 00:34:15,685 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-11-04 00:34:16,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-11-04 00:34:16,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-11-04 00:34:17,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-11-04 00:34:17,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-04 00:34:18,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-04 00:34:18,067 [ scc.repo] DEBUG ## Branches found:
2024-11-04 00:34:18,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-11-04 00:34:18,068 [ scc.git] DEBUG Get sha1 of %s
2024-11-04 00:34:18,068 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:34:18,073 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-04 00:34:18,077 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-04 00:34:18,077 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-04 00:34:18,244 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-04 00:34:18,259 [ scc.git] DEBUG Updating da5b7d11f..213bb61ad
2024-11-04 00:34:18,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/580 HTTP/1.1" 200 None
2024-11-04 00:34:19,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/589 HTTP/1.1" 200 None
2024-11-04 00:34:19,327 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-11-04 00:34:20,138 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-11-04 00:34:20,138 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-11-04 00:34:20,143 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-11-04 00:34:20,473 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-11-04 00:34:20,473 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-11-04 00:34:20,478 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head'
2024-11-04 00:34:20,861 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-11-04 00:34:20,861 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD
2024-11-04 00:34:20,866 [ scc.git] DEBUG Calling 'git fetch origin pull/590/head'
2024-11-04 00:34:21,167 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-11-04 00:34:21,167 [ scc.git] DEBUG * branch refs/pull/590/head -> FETCH_HEAD
2024-11-04 00:34:21,172 [ scc.git] DEBUG ## Unique users: []
2024-11-04 00:34:21,172 [ scc.git] DEBUG Get sha1 of %s
2024-11-04 00:34:21,172 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:34:21,177 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-11-04 00:34:21,183 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:34:21,187 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-11-04 00:34:21,206 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-11-04 00:34:21,206 [ scc.git] DEBUG Auto-merging setup.py
2024-11-04 00:34:21,207 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-04 00:34:21,211 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-11-04 00:34:21,211 [ scc.git] DEBUG setup.py | 1 +
2024-11-04 00:34:21,211 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-11-04 00:34:21,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:34:21,339 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-11-04 00:34:21,347 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:34:21,351 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-11-04 00:34:21,547 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-11-04 00:34:21,547 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-11-04 00:34:21,549 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-04 00:34:21,553 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-11-04 00:34:21,553 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-11-04 00:34:21,553 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-11-04 00:34:21,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:34:21,718 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dd2879608e047a7d71a648a23e6955ce591950fd'
2024-11-04 00:34:21,726 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:34:21,729 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Allow users to click a group name to quick-switch to that group) dd2879608e047a7d71a648a23e6955ce591950fd'
2024-11-04 00:34:21,860 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-04 00:34:21,863 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_content.html | 8 ++++++--
2024-11-04 00:34:21,863 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_dropdown2.html | 2 --
2024-11-04 00:34:21,863 [ scc.git] DEBUG 2 files changed, 6 insertions(+), 4 deletions(-)
2024-11-04 00:34:22,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:34:22,104 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b62eb79447919619888bd28ee4e264f7b744f314'
2024-11-04 00:34:22,112 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:34:22,116 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 590 (Update changelog) b62eb79447919619888bd28ee4e264f7b744f314'
2024-11-04 00:34:22,198 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-04 00:34:22,201 [ scc.git] DEBUG CHANGELOG.md | 15 +++++++++++++++
2024-11-04 00:34:22,201 [ scc.git] DEBUG 1 file changed, 15 insertions(+)
2024-11-04 00:34:22,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:34:22,491 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-04 00:34:22,530 [ scc.git] DEBUG Get sha1 of %s
2024-11-04 00:34:22,530 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-04 00:34:22,535 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-04 00:34:22,571 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-04 00:34:22,581 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5040dd3fa0> has no local changes
2024-11-04 00:34:22,581 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Updating da5b7d11f..213bb61ad
Previously merged:
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 589 knabar 'Remove Python 2 compatibility import'
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 583 DavidStirling 'Allow users to click a group name to quick-switch to that group'
- PR 590 knabar 'Update changelog'
Generated by OMERO-python-superbuild-push#221 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/221/)'
2024-11-04 00:34:22,591 [ scc.git] DEBUG [detached HEAD bd01f0dab] merge master -Dorg -Ssuccess-only
2024-11-04 00:34:22,591 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-04 00:34:22,591 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-04 00:34:22,640 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-11-04 00:34:22,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:34:22,890 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-11-04 00:34:23,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:34:23,274 [ scc.config] DEBUG Found submodule.omero-py.url
2024-11-04 00:34:23,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:34:23,664 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-11-04 00:34:24,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:34:24,051 [ scc.config] DEBUG Found submodule.omero-web.url
2024-11-04 00:34:24,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-04 00:34:24,431 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-04 00:34:24,456 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f504316afd0> has local changes
2024-11-04 00:34:24,456 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Updating da5b7d11f..213bb61ad
Previously merged:
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 589 knabar 'Remove Python 2 compatibility import'
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 583 DavidStirling 'Allow users to click a group name to quick-switch to that group'
- PR 590 knabar 'Update changelog'
Generated by OMERO-python-superbuild-push#221 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/221/)'
2024-11-04 00:34:24,464 [ scc.git] DEBUG [detached HEAD 8906bdf] merge master -Dorg -Ssuccess-only
2024-11-04 00:34:24,465 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-11-04 00:34:24,465 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-11-04 00:34:24,465 [ scc.merge] INFO Already up to date.
2024-11-04 00:34:24,465 [ scc.merge] INFO
2024-11-04 00:34:24,465 [ scc.merge] INFO Merged PRs:
2024-11-04 00:34:24,465 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-11-04 00:34:24,465 [ scc.merge] INFO
2024-11-04 00:34:24,465 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-11-04 00:34:24,465 [ scc.merge] INFO Already up to date.
2024-11-04 00:34:24,465 [ scc.merge] INFO
2024-11-04 00:34:24,465 [ scc.merge] INFO Merged PRs:
2024-11-04 00:34:24,465 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-11-04 00:34:24,465 [ scc.merge] INFO
2024-11-04 00:34:24,465 [ scc.merge] INFO Repository: ome/omero-marshal
2024-11-04 00:34:24,465 [ scc.merge] INFO Excluded PRs:
2024-11-04 00:34:24,465 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-11-04 00:34:24,465 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-11-04 00:34:24,465 [ scc.merge] INFO Already up to date.
2024-11-04 00:34:24,465 [ scc.merge] INFO
2024-11-04 00:34:24,465 [ scc.merge] INFO Merged PRs:
2024-11-04 00:34:24,465 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-11-04 00:34:24,465 [ scc.merge] INFO
2024-11-04 00:34:24,466 [ scc.merge] INFO Repository: ome/omero-py
2024-11-04 00:34:24,466 [ scc.merge] INFO Excluded PRs:
2024-11-04 00:34:24,466 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
2024-11-04 00:34:24,466 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-11-04 00:34:24,466 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-11-04 00:34:24,466 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-11-04 00:34:24,466 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-11-04 00:34:24,466 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-11-04 00:34:24,466 [ scc.merge] INFO Already up to date.
2024-11-04 00:34:24,466 [ scc.merge] INFO
2024-11-04 00:34:24,466 [ scc.merge] INFO Merged PRs:
2024-11-04 00:34:24,466 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-11-04 00:34:24,466 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-11-04 00:34:24,466 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-11-04 00:34:24,466 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-11-04 00:34:24,466 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-11-04 00:34:24,466 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-11-04 00:34:24,466 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-11-04 00:34:24,466 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-11-04 00:34:24,466 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation'
2024-11-04 00:34:24,466 [ scc.merge] INFO - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-11-04 00:34:24,466 [ scc.merge] INFO
2024-11-04 00:34:24,466 [ scc.merge] INFO Repository: ome/omero-scripts
2024-11-04 00:34:24,466 [ scc.merge] INFO Excluded PRs:
2024-11-04 00:34:24,466 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-11-04 00:34:24,466 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-11-04 00:34:24,466 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-11-04 00:34:24,466 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-11-04 00:34:24,466 [ scc.merge] INFO Already up to date.
2024-11-04 00:34:24,466 [ scc.merge] INFO
2024-11-04 00:34:24,466 [ scc.merge] INFO Merged PRs:
2024-11-04 00:34:24,466 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-11-04 00:34:24,466 [ scc.merge] INFO
2024-11-04 00:34:24,466 [ scc.merge] INFO Conflicting PRs (not included):
2024-11-04 00:34:24,466 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-11-04 00:34:24,467 [ scc.merge] INFO
2024-11-04 00:34:24,467 [ scc.merge] INFO Repository: ome/omero-web
2024-11-04 00:34:24,467 [ scc.merge] INFO Excluded PRs:
2024-11-04 00:34:24,467 [ scc.merge] INFO - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-11-04 00:34:24,467 [ scc.merge] INFO - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
2024-11-04 00:34:24,467 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-11-04 00:34:24,467 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-11-04 00:34:24,467 [ scc.merge] INFO Updating da5b7d11f..213bb61ad
2024-11-04 00:34:24,467 [ scc.merge] INFO Previously merged:
2024-11-04 00:34:24,467 [ scc.merge] INFO - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-11-04 00:34:24,467 [ scc.merge] INFO - PR 589 knabar 'Remove Python 2 compatibility import'
2024-11-04 00:34:24,467 [ scc.merge] INFO
2024-11-04 00:34:24,467 [ scc.merge] INFO Merged PRs:
2024-11-04 00:34:24,467 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-11-04 00:34:24,467 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-11-04 00:34:24,467 [ scc.merge] INFO - PR 583 DavidStirling 'Allow users to click a group name to quick-switch to that group'
2024-11-04 00:34:24,467 [ scc.merge] INFO - PR 590 knabar 'Update changelog'
2024-11-04 00:34:24,467 [ scc.merge] INFO
2024-11-04 00:34:24,467 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-11-04 00:34:24,467 [ scc.git] DEBUG Calling 'git remote'
2024-11-04 00:34:24,471 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-11-04 00:34:24,471 [ scc.git] DEBUG Calling 'git remote'
2024-11-04 00:34:24,475 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-04 00:34:24,476 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-11-04 00:34:24,476 [ scc.git] DEBUG Calling 'git remote'
2024-11-04 00:34:24,479 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-04 00:34:24,480 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-11-04 00:34:24,480 [ scc.git] DEBUG Calling 'git remote'
2024-11-04 00:34:24,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-04 00:34:24,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-11-04 00:34:24,483 [ scc.git] DEBUG Calling 'git remote'
2024-11-04 00:34:24,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-04 00:34:24,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-11-04 00:34:24,487 [ scc.git] DEBUG Calling 'git remote'
2024-11-04 00:34:24,490 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 4fd72efa
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from da5b7d11f
nothing to commit, working tree clean
HEAD detached from e849d72
nothing to commit, working tree clean
2024-11-04 00:34:51,223 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
![[Jenkins]](/jenkins/static/0005d222/images/svgs/logo.svg){kind=logo}
