![[Jenkins]](/jenkins/static/f6f303f9/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 287 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 2a94f4285f6060129b0481df8a8b43846e0bba7b (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 2a94f4285f6060129b0481df8a8b43846e0bba7b # timeout=10 Commit message: "Merge pull request #293 from ome/dependabot/submodules/omero-py-4fd72ef" > git rev-list --no-walk e849d7220735d67c4a474051cc03805d0a822cde # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 250 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3 -m venv build/venv > git submodule update --init --recursive omero-scripts # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.3.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.3.1 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.5.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.0-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.15-py2.py3-none-any.whl.metadata (5.5 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.3-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (34 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.5.0-py3-none-any.whl (375 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.10.0-py3-none-any.whl (23 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.15-py2.py3-none-any.whl (9.9 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (144 kB) Using cached cryptography-43.0.3-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.15 PyGithub-2.5.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.4.0 cryptography-43.0.3 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-11-22 00:34:25,542 [ scc.config] DEBUG Found github.token 2024-11-22 00:34:25,545 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-11-22 00:34:25,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:34:26,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:34:26,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-11-22 00:34:26,502 [ scc.gh] DEBUG 4398 remaining from 5000 (Reset at 00:11 2024-11-22 00:34:26,503 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-22 00:34:26,507 [ scc.git] DEBUG Check current status 2024-11-22 00:34:26,507 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-22 00:34:26,510 [ scc.git] DEBUG 2a94f42 Merge pull request #293 from ome/dependabot/submodules/omero-py-4fd72ef 2024-11-22 00:34:26,511 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-22 00:34:26,548 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-11-22 00:34:26,551 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-11-22 00:34:26,556 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa) 2024-11-22 00:34:26,560 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe) 2024-11-22 00:34:26,563 [ scc.git] DEBUG cbf9730529bf9839d3dd252f507be03ea59dae2a omero-web (v5.28.0-1-gcbf973052) 2024-11-22 00:34:26,567 [ scc.config] DEBUG Found remote.origin.url 2024-11-22 00:34:27,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-11-22 00:34:27,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-22 00:34:28,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-22 00:34:28,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-22 00:34:28,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-22 00:34:28,805 [ scc.git] DEBUG Resetting... 2024-11-22 00:34:28,805 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-11-22 00:34:28,811 [ scc.git] DEBUG HEAD is now at 2a94f42 Merge pull request #293 from ome/dependabot/submodules/omero-py-4fd72ef 2024-11-22 00:34:28,812 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-11-22 00:34:28,866 [ scc.git] DEBUG Check current status 2024-11-22 00:34:28,866 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-22 00:34:28,870 [ scc.git] DEBUG 2a94f42 Merge pull request #293 from ome/dependabot/submodules/omero-py-4fd72ef 2024-11-22 00:34:28,871 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-22 00:34:28,912 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-11-22 00:34:28,914 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-11-22 00:34:28,918 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa) 2024-11-22 00:34:28,922 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe) 2024-11-22 00:34:28,925 [ scc.git] DEBUG cbf9730529bf9839d3dd252f507be03ea59dae2a omero-web (v5.28.0-1-gcbf973052) 2024-11-22 00:34:28,926 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-11-22 00:34:28,926 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-11-22 00:34:28,926 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-11-22 00:34:28,926 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-11-22 00:34:28,926 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-11-22 00:34:28,927 [ scc.repo] DEBUG ## PRs found: 2024-11-22 00:34:29,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2024-11-22 00:34:29,230 [ scc.repo] DEBUG ## Branches found: 2024-11-22 00:34:29,230 [ scc.git] DEBUG Get sha1 of %s 2024-11-22 00:34:29,230 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:34:29,236 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-22 00:34:29,239 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-22 00:34:29,240 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-22 00:34:29,243 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-22 00:34:29,247 [ scc.git] DEBUG Already up to date. 2024-11-22 00:34:29,247 [ scc.git] DEBUG ## Unique users: [] 2024-11-22 00:34:29,247 [ scc.git] DEBUG Get sha1 of %s 2024-11-22 00:34:29,247 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:34:29,251 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-22 00:34:29,293 [ scc.git] DEBUG Get sha1 of %s 2024-11-22 00:34:29,293 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:34:29,298 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-22 00:34:30,083 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f33ecbb1820> has no local changes 2024-11-22 00:34:30,083 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#241 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/241/)' 2024-11-22 00:34:30,124 [ scc.git] DEBUG [detached HEAD 1a6b8d7] merge master -Dorg -Snone 2024-11-22 00:34:30,124 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-11-22 00:34:30,124 [ scc.merge] INFO Already up to date. 2024-11-22 00:34:30,124 [ scc.merge] INFO 2024-11-22 00:34:30,124 [ scc.merge] INFO 2024-11-22 00:34:30,124 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-11-22 00:34:30,124 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' From https://github.com/ome/omero-dropbox a4307f4..01fa0c5 master -> origin/master Submodule path 'omero-dropbox': checked out '01fa0c567e5391e5f920bd17d6e9eab210c9df67' From https://github.com/ome/omero-marshal cca4c2f..0e829fa master -> origin/master Submodule path 'omero-marshal': checked out '0e829faff6efffc160dc73d7e292bb773d70f585' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-11-22 00:34:33,253 [ scc.config] DEBUG Found github.token 2024-11-22 00:34:33,256 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-11-22 00:34:33,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:34:33,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:34:34,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-11-22 00:34:34,249 [ scc.gh] DEBUG 4390 remaining from 5000 (Reset at 00:11 2024-11-22 00:34:34,250 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-22 00:34:34,254 [ scc.git] DEBUG Check current status 2024-11-22 00:34:34,254 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-22 00:34:34,258 [ scc.git] DEBUG 1a6b8d7 merge master -Dorg -Snone 2024-11-22 00:34:34,258 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-22 00:34:34,298 [ scc.git] DEBUG +01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2024-11-22 00:34:34,301 [ scc.git] DEBUG +0e829faff6efffc160dc73d7e292bb773d70f585 omero-marshal (v0.9.0-7-g0e829fa) 2024-11-22 00:34:34,305 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa) 2024-11-22 00:34:34,309 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe) 2024-11-22 00:34:34,312 [ scc.git] DEBUG cbf9730529bf9839d3dd252f507be03ea59dae2a omero-web (v5.28.0-1-gcbf973052) 2024-11-22 00:34:34,317 [ scc.config] DEBUG Found remote.origin.url 2024-11-22 00:34:34,317 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-11-22 00:34:34,319 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-11-22 00:34:34,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-11-22 00:34:35,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-22 00:34:35,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-22 00:34:35,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-22 00:34:36,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-22 00:34:36,417 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-22 00:34:36,467 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-11-22 00:34:36,467 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-22 00:34:36,473 [ scc.git] DEBUG Check current status 2024-11-22 00:34:36,473 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-22 00:34:36,476 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2024-11-22 00:34:36,477 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-22 00:34:36,518 [ scc.config] DEBUG Found remote.origin.url 2024-11-22 00:34:36,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2024-11-22 00:34:37,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-22 00:34:37,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-22 00:34:38,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-22 00:34:38,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-22 00:34:38,553 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-22 00:34:38,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-22 00:34:38,596 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-11-22 00:34:38,596 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-22 00:34:38,600 [ scc.git] DEBUG Check current status 2024-11-22 00:34:38,600 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-22 00:34:38,605 [ scc.git] DEBUG 0e829fa Merge pull request #83 from jburel/remove_py38 2024-11-22 00:34:38,605 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-22 00:34:38,652 [ scc.config] DEBUG Found remote.origin.url 2024-11-22 00:34:39,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2024-11-22 00:34:39,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-22 00:34:39,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-22 00:34:40,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-22 00:34:40,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-22 00:34:40,685 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-22 00:34:40,727 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-22 00:34:40,729 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-11-22 00:34:40,729 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-22 00:34:40,742 [ scc.git] DEBUG Check current status 2024-11-22 00:34:40,743 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-22 00:34:40,759 [ scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0 2024-11-22 00:34:40,760 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-22 00:34:40,945 [ scc.config] DEBUG Found remote.origin.url 2024-11-22 00:34:41,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2024-11-22 00:34:41,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-22 00:34:42,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-22 00:34:42,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-22 00:34:42,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-22 00:34:42,941 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-22 00:34:42,980 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-22 00:34:42,981 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-11-22 00:34:42,981 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-22 00:34:42,986 [ scc.git] DEBUG Check current status 2024-11-22 00:34:42,986 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-22 00:34:43,007 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-11-22 00:34:43,007 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-22 00:34:43,052 [ scc.config] DEBUG Found remote.origin.url 2024-11-22 00:34:43,053 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-11-22 00:34:43,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2024-11-22 00:34:43,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-22 00:34:44,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-22 00:34:44,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-22 00:34:45,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-22 00:34:45,065 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-22 00:34:45,107 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-22 00:34:45,109 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-11-22 00:34:45,109 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-22 00:34:45,114 [ scc.git] DEBUG Check current status 2024-11-22 00:34:45,114 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-22 00:34:45,136 [ scc.git] DEBUG cbf973052 Bump version: 5.28.0 → 5.28.1.dev0 2024-11-22 00:34:45,136 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-22 00:34:45,181 [ scc.config] DEBUG Found remote.origin.url 2024-11-22 00:34:45,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2024-11-22 00:34:46,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-22 00:34:46,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-22 00:34:46,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-22 00:34:47,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-22 00:34:47,371 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-22 00:34:47,411 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-22 00:34:47,411 [ scc.git] DEBUG Resetting... 2024-11-22 00:34:47,411 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-11-22 00:34:47,417 [ scc.git] DEBUG HEAD is now at 1a6b8d7 merge master -Dorg -Snone 2024-11-22 00:34:47,417 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-11-22 00:34:47,464 [ scc.git] DEBUG Submodule path 'omero-dropbox': checked out 'a4307f475a2690c4aa4f287864bad9d6d97ebb8f' 2024-11-22 00:34:47,477 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3' 2024-11-22 00:34:47,489 [ scc.git] DEBUG Check current status 2024-11-22 00:34:47,489 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-22 00:34:47,493 [ scc.git] DEBUG 1a6b8d7 merge master -Dorg -Snone 2024-11-22 00:34:47,493 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-22 00:34:47,533 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-11-22 00:34:47,536 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-11-22 00:34:47,539 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa) 2024-11-22 00:34:47,543 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe) 2024-11-22 00:34:47,546 [ scc.git] DEBUG cbf9730529bf9839d3dd252f507be03ea59dae2a omero-web (v5.28.0-1-gcbf973052) 2024-11-22 00:34:47,547 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-11-22 00:34:47,547 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-11-22 00:34:47,547 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-11-22 00:34:47,547 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-11-22 00:34:47,547 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-11-22 00:34:47,547 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-11-22 00:34:47,548 [ scc.repo] DEBUG ## PRs found: 2024-11-22 00:34:47,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2024-11-22 00:34:47,836 [ scc.repo] DEBUG ## Branches found: 2024-11-22 00:34:47,836 [ scc.git] DEBUG Get sha1 of %s 2024-11-22 00:34:47,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:34:47,842 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-22 00:34:47,846 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-22 00:34:47,846 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-22 00:34:47,850 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-22 00:34:47,855 [ scc.git] DEBUG Already up to date. 2024-11-22 00:34:47,855 [ scc.git] DEBUG ## Unique users: [] 2024-11-22 00:34:47,855 [ scc.git] DEBUG Get sha1 of %s 2024-11-22 00:34:47,855 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:34:47,860 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-22 00:34:47,902 [ scc.git] DEBUG Get sha1 of %s 2024-11-22 00:34:47,902 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:34:47,907 [ scc.repo] DEBUG ## PRs found: 2024-11-22 00:34:48,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2024-11-22 00:34:48,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2024-11-22 00:34:49,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2024-11-22 00:34:49,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-11-22 00:34:50,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:34:50,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-11-22 00:34:51,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2024-11-22 00:34:51,117 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-11-22 00:34:51,117 [ scc.repo] DEBUG ## Branches found: 2024-11-22 00:34:51,117 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-11-22 00:34:51,117 [ scc.git] DEBUG Get sha1 of %s 2024-11-22 00:34:51,117 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:34:51,122 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-22 00:34:51,126 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-22 00:34:51,126 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-22 00:34:51,131 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-22 00:34:51,139 [ scc.git] DEBUG Updating a4307f4..01fa0c5 2024-11-22 00:34:51,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls/24 HTTP/1.1" 200 None 2024-11-22 00:34:52,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls/25 HTTP/1.1" 200 None 2024-11-22 00:34:52,363 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2024-11-22 00:34:52,673 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2024-11-22 00:34:52,673 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2024-11-22 00:34:52,677 [ scc.git] DEBUG ## Unique users: [] 2024-11-22 00:34:52,677 [ scc.git] DEBUG Get sha1 of %s 2024-11-22 00:34:52,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:34:52,681 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-11-22 00:34:52,686 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:34:52,690 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-11-22 00:34:52,827 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2024-11-22 00:34:52,827 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2024-11-22 00:34:52,827 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2024-11-22 00:34:52,827 [ scc.git] DEBUG Auto-merging src/fsLists.py 2024-11-22 00:34:52,827 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2024-11-22 00:34:52,827 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2024-11-22 00:34:52,827 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2024-11-22 00:34:52,827 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2024-11-22 00:34:52,827 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2024-11-22 00:34:52,827 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-22 00:34:52,832 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2024-11-22 00:34:52,832 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2024-11-22 00:34:52,832 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2024-11-22 00:34:52,832 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2024-11-22 00:34:52,832 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2024-11-22 00:34:52,832 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2024-11-22 00:34:52,832 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2024-11-22 00:34:52,834 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2024-11-22 00:34:52,834 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2024-11-22 00:34:52,834 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2024-11-22 00:34:52,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:34:52,979 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-22 00:34:53,020 [ scc.git] DEBUG Get sha1 of %s 2024-11-22 00:34:53,020 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:34:53,025 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-22 00:34:53,065 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-22 00:34:53,072 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb80ec2bf10> has no local changes 2024-11-22 00:34:53,072 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Updating a4307f4..01fa0c5 Previously merged: - PR 24 jburel 'Build' - PR 25 jburel 'Drop Python 3.8' Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#241 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/241/)' 2024-11-22 00:34:53,080 [ scc.git] DEBUG [detached HEAD d2bac76] merge master -Dorg -Ssuccess-only 2024-11-22 00:34:53,080 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-22 00:34:53,080 [ scc.repo] DEBUG ## PRs found: 2024-11-22 00:34:53,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2024-11-22 00:34:54,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/82 HTTP/1.1" 200 None 2024-11-22 00:34:54,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/9339efb1dc7acf574426ddd54c0ac1fd20e4d83c HTTP/1.1" 200 None 2024-11-22 00:34:55,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/9339efb1dc7acf574426ddd54c0ac1fd20e4d83c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:34:55,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/9339efb1dc7acf574426ddd54c0ac1fd20e4d83c/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-22 00:34:55,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/9339efb1dc7acf574426ddd54c0ac1fd20e4d83c HTTP/1.1" 200 None 2024-11-22 00:34:56,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/9339efb1dc7acf574426ddd54c0ac1fd20e4d83c?per_page=1 HTTP/1.1" 200 2 2024-11-22 00:34:56,348 [ scc.repo] DEBUG - PR 82 jburel 'Build' 2024-11-22 00:34:56,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2024-11-22 00:34:57,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2024-11-22 00:34:57,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-11-22 00:34:58,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:34:58,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-11-22 00:34:59,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2024-11-22 00:34:59,126 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2024-11-22 00:34:59,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2024-11-22 00:35:00,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2024-11-22 00:35:00,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2024-11-22 00:35:00,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2024-11-22 00:35:00,932 [ scc.repo] DEBUG ## Branches found: 2024-11-22 00:35:00,932 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-11-22 00:35:00,932 [ scc.git] DEBUG Get sha1 of %s 2024-11-22 00:35:00,932 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:35:00,938 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-22 00:35:00,943 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-22 00:35:00,943 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-22 00:35:00,948 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-22 00:35:00,957 [ scc.git] DEBUG Updating cca4c2f..0e829fa 2024-11-22 00:35:01,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/83 HTTP/1.1" 200 None 2024-11-22 00:35:01,669 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2024-11-22 00:35:02,086 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2024-11-22 00:35:02,086 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2024-11-22 00:35:02,092 [ scc.git] DEBUG Calling 'git fetch origin pull/82/head' 2024-11-22 00:35:02,750 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2024-11-22 00:35:02,750 [ scc.git] DEBUG * branch refs/pull/82/head -> FETCH_HEAD 2024-11-22 00:35:02,755 [ scc.git] DEBUG ## Unique users: [] 2024-11-22 00:35:02,755 [ scc.git] DEBUG Get sha1 of %s 2024-11-22 00:35:02,755 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:35:02,760 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-11-22 00:35:02,765 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:35:02,769 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-11-22 00:35:02,780 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2024-11-22 00:35:02,781 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-22 00:35:02,784 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2024-11-22 00:35:02,784 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2024-11-22 00:35:02,784 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2024-11-22 00:35:02,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:35:02,920 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9339efb1dc7acf574426ddd54c0ac1fd20e4d83c' 2024-11-22 00:35:02,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:35:02,929 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 82 (Build) 9339efb1dc7acf574426ddd54c0ac1fd20e4d83c' 2024-11-22 00:35:02,941 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-22 00:35:02,943 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 8 +++++--- 2024-11-22 00:35:02,943 [ scc.git] DEBUG 1 file changed, 5 insertions(+), 3 deletions(-) 2024-11-22 00:35:03,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:35:03,310 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-22 00:35:03,351 [ scc.git] DEBUG Get sha1 of %s 2024-11-22 00:35:03,351 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:35:03,356 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-22 00:35:03,394 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-22 00:35:03,400 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb80f9cdf70> has no local changes 2024-11-22 00:35:03,400 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Updating cca4c2f..0e829fa Previously merged: - PR 83 jburel 'Remove py38' Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' - PR 82 jburel 'Build' Generated by OMERO-python-superbuild-push#241 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/241/)' 2024-11-22 00:35:03,409 [ scc.git] DEBUG [detached HEAD 2106029] merge master -Dorg -Ssuccess-only 2024-11-22 00:35:03,409 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-22 00:35:03,409 [ scc.repo] DEBUG ## PRs found: 2024-11-22 00:35:04,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2024-11-22 00:35:04,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/434 HTTP/1.1" 200 None 2024-11-22 00:35:05,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/e39141b642595d0051281f9fad6bf107b6e7a358 HTTP/1.1" 200 None 2024-11-22 00:35:05,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/e39141b642595d0051281f9fad6bf107b6e7a358/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:35:06,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/e39141b642595d0051281f9fad6bf107b6e7a358/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-22 00:35:06,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/e39141b642595d0051281f9fad6bf107b6e7a358 HTTP/1.1" 200 None 2024-11-22 00:35:06,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/e39141b642595d0051281f9fad6bf107b6e7a358?per_page=1 HTTP/1.1" 200 None 2024-11-22 00:35:07,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/e39141b642595d0051281f9fad6bf107b6e7a358 HTTP/1.1" 200 None 2024-11-22 00:35:07,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/e39141b642595d0051281f9fad6bf107b6e7a358/status HTTP/1.1" 200 None 2024-11-22 00:35:07,847 [ scc.repo] DEBUG - PR 434 sbesson 'Remove Python 3.8 from the testing matrix' 2024-11-22 00:35:08,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/431 HTTP/1.1" 200 None 2024-11-22 00:35:08,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None 2024-11-22 00:35:09,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:35:09,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-22 00:35:10,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None 2024-11-22 00:35:10,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0e500ec05bf9227b66b28a480b40e0936241d953?per_page=1 HTTP/1.1" 200 None 2024-11-22 00:35:11,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None 2024-11-22 00:35:11,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/status HTTP/1.1" 200 None 2024-11-22 00:35:11,594 [ scc.repo] DEBUG - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers' 2024-11-22 00:35:12,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None 2024-11-22 00:35:12,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None 2024-11-22 00:35:13,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None 2024-11-22 00:35:13,041 [ scc.repo] DEBUG # ... Include label: include 2024-11-22 00:35:13,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None 2024-11-22 00:35:13,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:35:14,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-22 00:35:14,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None 2024-11-22 00:35:15,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1?per_page=1 HTTP/1.1" 200 None 2024-11-22 00:35:15,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None 2024-11-22 00:35:16,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/status HTTP/1.1" 200 None 2024-11-22 00:35:16,155 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation' 2024-11-22 00:35:16,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2024-11-22 00:35:17,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2024-11-22 00:35:17,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-11-22 00:35:18,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:35:18,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-22 00:35:18,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-11-22 00:35:19,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2024-11-22 00:35:19,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-11-22 00:35:20,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2024-11-22 00:35:20,358 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2024-11-22 00:35:20,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2024-11-22 00:35:21,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2024-11-22 00:35:21,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2024-11-22 00:35:22,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:35:22,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-22 00:35:23,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2024-11-22 00:35:23,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-11-22 00:35:24,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:35:24,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-22 00:35:25,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-11-22 00:35:25,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None 2024-11-22 00:35:25,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-11-22 00:35:26,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None 2024-11-22 00:35:26,341 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2024-11-22 00:35:26,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None 2024-11-22 00:35:26,816 [ scc.repo] DEBUG # ... Exclude label: exclude 2024-11-22 00:35:27,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None 2024-11-22 00:35:27,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None 2024-11-22 00:35:28,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-11-22 00:35:28,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:35:29,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-11-22 00:35:29,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2 2024-11-22 00:35:29,552 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-11-22 00:35:30,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2024-11-22 00:35:30,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2024-11-22 00:35:30,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-11-22 00:35:31,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:35:31,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-22 00:35:32,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-11-22 00:35:32,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None 2024-11-22 00:35:33,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-11-22 00:35:33,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None 2024-11-22 00:35:33,729 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2024-11-22 00:35:34,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None 2024-11-22 00:35:34,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None 2024-11-22 00:35:35,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2024-11-22 00:35:35,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2024-11-22 00:35:36,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-11-22 00:35:36,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:35:37,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-11-22 00:35:37,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2 2024-11-22 00:35:37,466 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj' 2024-11-22 00:35:37,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None 2024-11-22 00:35:38,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-11-22 00:35:38,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:35:39,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-11-22 00:35:39,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2 2024-11-22 00:35:39,751 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-11-22 00:35:40,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None 2024-11-22 00:35:40,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None 2024-11-22 00:35:41,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-11-22 00:35:41,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:35:42,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-11-22 00:35:42,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2 2024-11-22 00:35:42,553 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error' 2024-11-22 00:35:43,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2024-11-22 00:35:43,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2024-11-22 00:35:44,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-11-22 00:35:44,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:35:44,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-11-22 00:35:45,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2024-11-22 00:35:45,327 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2024-11-22 00:35:45,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None 2024-11-22 00:35:46,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None 2024-11-22 00:35:46,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None 2024-11-22 00:35:47,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None 2024-11-22 00:35:47,135 [ scc.repo] DEBUG ## Branches found: 2024-11-22 00:35:47,135 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-11-22 00:35:47,136 [ scc.git] DEBUG Get sha1 of %s 2024-11-22 00:35:47,136 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:35:47,141 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-22 00:35:47,146 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-22 00:35:47,146 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-22 00:35:47,150 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-22 00:35:47,154 [ scc.git] DEBUG Already up to date. 2024-11-22 00:35:47,155 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2024-11-22 00:35:48,789 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-22 00:35:48,789 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2024-11-22 00:35:48,795 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head' 2024-11-22 00:35:49,107 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-22 00:35:49,108 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD 2024-11-22 00:35:49,118 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head' 2024-11-22 00:35:49,527 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-22 00:35:49,528 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD 2024-11-22 00:35:49,533 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head' 2024-11-22 00:35:49,826 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-22 00:35:49,826 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD 2024-11-22 00:35:49,832 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2024-11-22 00:35:50,206 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-22 00:35:50,206 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2024-11-22 00:35:50,211 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2024-11-22 00:35:50,536 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-22 00:35:50,536 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2024-11-22 00:35:50,541 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2024-11-22 00:35:50,823 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-22 00:35:50,824 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2024-11-22 00:35:50,828 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2024-11-22 00:35:51,252 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-22 00:35:51,253 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2024-11-22 00:35:51,259 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head' 2024-11-22 00:35:52,225 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-22 00:35:52,225 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD 2024-11-22 00:35:52,231 [ scc.git] DEBUG Calling 'git fetch origin pull/431/head' 2024-11-22 00:35:52,587 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-22 00:35:52,588 [ scc.git] DEBUG * branch refs/pull/431/head -> FETCH_HEAD 2024-11-22 00:35:52,593 [ scc.git] DEBUG Calling 'git fetch origin pull/434/head' 2024-11-22 00:35:53,040 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-22 00:35:53,040 [ scc.git] DEBUG * branch refs/pull/434/head -> FETCH_HEAD 2024-11-22 00:35:53,045 [ scc.git] DEBUG ## Unique users: [] 2024-11-22 00:35:53,045 [ scc.git] DEBUG Get sha1 of %s 2024-11-22 00:35:53,046 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:35:53,051 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-11-22 00:35:53,070 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:35:53,075 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-11-22 00:35:53,273 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2024-11-22 00:35:53,274 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2024-11-22 00:35:53,275 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-22 00:35:53,280 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2024-11-22 00:35:53,280 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2024-11-22 00:35:53,280 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2024-11-22 00:35:53,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:35:53,414 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-11-22 00:35:53,427 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:35:53,431 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-11-22 00:35:53,812 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-11-22 00:35:53,812 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py 2024-11-22 00:35:53,813 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-22 00:35:53,822 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------ 2024-11-22 00:35:53,822 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++ 2024-11-22 00:35:53,822 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-) 2024-11-22 00:35:53,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:35:53,963 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-11-22 00:35:53,975 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:35:53,980 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-11-22 00:35:54,049 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py 2024-11-22 00:35:54,050 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-22 00:35:54,053 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++---- 2024-11-22 00:35:54,053 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-) 2024-11-22 00:35:54,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:35:54,370 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a' 2024-11-22 00:35:54,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:35:54,387 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a' 2024-11-22 00:35:54,504 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py 2024-11-22 00:35:54,504 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py 2024-11-22 00:35:54,505 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-22 00:35:54,509 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++- 2024-11-22 00:35:54,509 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +- 2024-11-22 00:35:54,509 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-) 2024-11-22 00:35:54,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:35:54,754 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-11-22 00:35:54,767 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:35:54,771 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-11-22 00:35:54,846 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-22 00:35:54,849 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2024-11-22 00:35:54,849 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2024-11-22 00:35:54,849 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2024-11-22 00:35:54,849 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2024-11-22 00:35:54,849 [ scc.git] DEBUG create mode 100644 connect.py 2024-11-22 00:35:55,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:35:55,138 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-11-22 00:35:55,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:35:55,155 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-11-22 00:35:55,180 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py 2024-11-22 00:35:55,181 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-22 00:35:55,184 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++ 2024-11-22 00:35:55,184 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-11-22 00:35:55,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:35:55,527 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2024-11-22 00:35:55,539 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:35:55,544 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2024-11-22 00:35:55,665 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2024-11-22 00:35:55,666 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-22 00:35:55,670 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2024-11-22 00:35:55,670 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2024-11-22 00:35:55,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:35:55,913 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2024-11-22 00:35:55,927 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:35:55,933 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2024-11-22 00:35:56,095 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-11-22 00:35:56,097 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-22 00:35:56,107 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2024-11-22 00:35:56,108 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2024-11-22 00:35:56,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:35:56,312 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1' 2024-11-22 00:35:56,326 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:35:56,330 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1' 2024-11-22 00:35:56,427 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-22 00:35:56,431 [ scc.git] DEBUG .gitignore | 1 + 2024-11-22 00:35:56,432 [ scc.git] DEBUG src/omero/plugins/download.py | 17 ++++++++++++----- 2024-11-22 00:35:56,432 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 5 deletions(-) 2024-11-22 00:35:56,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:35:56,723 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0e500ec05bf9227b66b28a480b40e0936241d953' 2024-11-22 00:35:56,738 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:35:56,743 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 431 (omero.HdfStorage.update: add size check on data.rowNumbers) 0e500ec05bf9227b66b28a480b40e0936241d953' 2024-11-22 00:35:56,813 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-22 00:35:56,816 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 1 + 2024-11-22 00:35:56,816 [ scc.git] DEBUG 1 file changed, 1 insertion(+) 2024-11-22 00:35:57,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:35:57,112 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e39141b642595d0051281f9fad6bf107b6e7a358' 2024-11-22 00:35:57,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:35:57,135 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 434 (Remove Python 3.8 from the testing matrix) e39141b642595d0051281f9fad6bf107b6e7a358' 2024-11-22 00:35:57,193 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-22 00:35:57,204 [ scc.git] DEBUG .github/workflows/workflow.yml | 3 +-- 2024-11-22 00:35:57,204 [ scc.git] DEBUG tox.ini | 5 +---- 2024-11-22 00:35:57,204 [ scc.git] DEBUG 2 files changed, 2 insertions(+), 6 deletions(-) 2024-11-22 00:35:57,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:35:57,494 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-22 00:35:57,543 [ scc.git] DEBUG Get sha1 of %s 2024-11-22 00:35:57,543 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:35:57,550 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-22 00:35:57,589 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-22 00:35:57,596 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb80dbf4e80> has no local changes 2024-11-22 00:35:57,596 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 427 Rdornier 'Add fileset folder creation' - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers' - PR 434 sbesson 'Remove Python 3.8 from the testing matrix' Generated by OMERO-python-superbuild-push#241 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/241/)' 2024-11-22 00:35:57,605 [ scc.git] DEBUG [detached HEAD 4d62ed40] merge master -Dorg -Ssuccess-only 2024-11-22 00:35:57,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-22 00:35:57,606 [ scc.git] INFO Overriding base-branch from master to develop 2024-11-22 00:35:57,606 [ scc.repo] DEBUG ## PRs found: 2024-11-22 00:35:58,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-11-22 00:35:58,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-11-22 00:35:59,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2024-11-22 00:35:59,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-11-22 00:36:00,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:36:00,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-22 00:36:00,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-11-22 00:36:01,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-11-22 00:36:01,401 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-11-22 00:36:01,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-11-22 00:36:02,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-11-22 00:36:02,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545/issues/216/comments?page=2 HTTP/1.1" 200 None 2024-11-22 00:36:03,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-11-22 00:36:03,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-11-22 00:36:04,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-11-22 00:36:04,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-11-22 00:36:05,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-11-22 00:36:05,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:36:06,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-11-22 00:36:06,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-11-22 00:36:06,633 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-11-22 00:36:07,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-11-22 00:36:07,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-11-22 00:36:08,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-11-22 00:36:08,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-11-22 00:36:08,628 [ scc.repo] DEBUG ## Branches found: 2024-11-22 00:36:08,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-11-22 00:36:08,628 [ scc.git] DEBUG Get sha1 of %s 2024-11-22 00:36:08,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:36:08,634 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-11-22 00:36:08,639 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-22 00:36:08,639 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-11-22 00:36:08,644 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-11-22 00:36:08,649 [ scc.git] DEBUG Already up to date. 2024-11-22 00:36:08,649 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-11-22 00:36:09,413 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2024-11-22 00:36:09,413 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-11-22 00:36:09,418 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-11-22 00:36:10,024 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2024-11-22 00:36:10,025 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-11-22 00:36:10,030 [ scc.git] DEBUG ## Unique users: [] 2024-11-22 00:36:10,030 [ scc.git] DEBUG Get sha1 of %s 2024-11-22 00:36:10,030 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:36:10,035 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-11-22 00:36:10,040 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:36:10,044 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-11-22 00:36:10,214 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-11-22 00:36:10,214 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-11-22 00:36:10,214 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-22 00:36:10,214 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-22 00:36:10,220 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-11-22 00:36:10,226 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-11-22 00:36:10,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:36:10,366 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-11-22 00:36:10,373 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-11-22 00:36:10,379 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#241](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/241/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/241/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-11-22 00:36:10,383 [ scc.config] DEBUG Found github.token 2024-11-22 00:36:10,383 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-11-22 00:36:10,384 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-11-22 00:36:10,389 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:36:10,394 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-11-22 00:36:10,438 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-22 00:36:10,441 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-11-22 00:36:10,441 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-11-22 00:36:10,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:36:10,772 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-22 00:36:10,814 [ scc.git] DEBUG Get sha1 of %s 2024-11-22 00:36:10,815 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:36:10,820 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-22 00:36:10,859 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-22 00:36:10,864 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb80db92640> has no local changes 2024-11-22 00:36:10,865 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#241 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/241/)' 2024-11-22 00:36:10,872 [ scc.git] DEBUG [detached HEAD 9dfc29f] merge master -Dorg -Ssuccess-only 2024-11-22 00:36:10,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-22 00:36:10,873 [ scc.repo] DEBUG ## PRs found: 2024-11-22 00:36:11,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2024-11-22 00:36:11,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/600 HTTP/1.1" 200 None 2024-11-22 00:36:12,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f8a449a16e16db1d32aa2e3f703b35e26852c6e4 HTTP/1.1" 200 None 2024-11-22 00:36:12,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f8a449a16e16db1d32aa2e3f703b35e26852c6e4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:36:13,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f8a449a16e16db1d32aa2e3f703b35e26852c6e4/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-22 00:36:13,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f8a449a16e16db1d32aa2e3f703b35e26852c6e4 HTTP/1.1" 200 None 2024-11-22 00:36:14,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/f8a449a16e16db1d32aa2e3f703b35e26852c6e4?per_page=1 HTTP/1.1" 200 None 2024-11-22 00:36:14,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f8a449a16e16db1d32aa2e3f703b35e26852c6e4 HTTP/1.1" 200 None 2024-11-22 00:36:15,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f8a449a16e16db1d32aa2e3f703b35e26852c6e4/status HTTP/1.1" 200 None 2024-11-22 00:36:15,206 [ scc.repo] DEBUG - PR 600 sbesson 'Remove Python 3.8 from the testing matrix' 2024-11-22 00:36:15,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/599 HTTP/1.1" 200 None 2024-11-22 00:36:16,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/599/comments HTTP/1.1" 200 None 2024-11-22 00:36:16,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ca710df681e3492d113fcad08e05df1f82e17791 HTTP/1.1" 200 None 2024-11-22 00:36:17,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ca710df681e3492d113fcad08e05df1f82e17791/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:36:17,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ca710df681e3492d113fcad08e05df1f82e17791/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-22 00:36:18,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ca710df681e3492d113fcad08e05df1f82e17791 HTTP/1.1" 200 None 2024-11-22 00:36:18,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/ca710df681e3492d113fcad08e05df1f82e17791?per_page=1 HTTP/1.1" 200 None 2024-11-22 00:36:19,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ca710df681e3492d113fcad08e05df1f82e17791 HTTP/1.1" 200 None 2024-11-22 00:36:19,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ca710df681e3492d113fcad08e05df1f82e17791/status HTTP/1.1" 200 None 2024-11-22 00:36:19,455 [ scc.repo] DEBUG - PR 599 knabar 'Update PyPI publish workflow to use build instead of sdist' 2024-11-22 00:36:19,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/598 HTTP/1.1" 200 None 2024-11-22 00:36:20,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/598/comments HTTP/1.1" 200 None 2024-11-22 00:36:20,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6f07268f880d6159be0bb56eacb20557305152b6 HTTP/1.1" 200 None 2024-11-22 00:36:21,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6f07268f880d6159be0bb56eacb20557305152b6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:36:21,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6f07268f880d6159be0bb56eacb20557305152b6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-22 00:36:22,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6f07268f880d6159be0bb56eacb20557305152b6 HTTP/1.1" 200 None 2024-11-22 00:36:22,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6f07268f880d6159be0bb56eacb20557305152b6?per_page=1 HTTP/1.1" 200 None 2024-11-22 00:36:23,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6f07268f880d6159be0bb56eacb20557305152b6 HTTP/1.1" 200 None 2024-11-22 00:36:23,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6f07268f880d6159be0bb56eacb20557305152b6/status HTTP/1.1" 200 None 2024-11-22 00:36:23,595 [ scc.repo] DEBUG - PR 598 will-moore 'Fix display of ContrastMethod' 2024-11-22 00:36:24,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2024-11-22 00:36:24,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2024-11-22 00:36:24,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2024-11-22 00:36:25,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:36:25,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-22 00:36:26,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2024-11-22 00:36:26,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2024-11-22 00:36:27,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2024-11-22 00:36:27,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2024-11-22 00:36:27,706 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2024-11-22 00:36:28,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2024-11-22 00:36:28,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2024-11-22 00:36:29,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2024-11-22 00:36:29,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:36:30,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-22 00:36:30,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2024-11-22 00:36:30,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2024-11-22 00:36:31,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2024-11-22 00:36:31,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2024-11-22 00:36:31,852 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2024-11-22 00:36:32,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/585 HTTP/1.1" 200 None 2024-11-22 00:36:32,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2024-11-22 00:36:33,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2024-11-22 00:36:33,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2024-11-22 00:36:34,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2024-11-22 00:36:34,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-11-22 00:36:35,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:36:35,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-22 00:36:36,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-11-22 00:36:36,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None 2024-11-22 00:36:36,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-11-22 00:36:37,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None 2024-11-22 00:36:37,417 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-11-22 00:36:37,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2024-11-22 00:36:38,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2024-11-22 00:36:38,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-11-22 00:36:39,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:36:39,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-22 00:36:40,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-11-22 00:36:40,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None 2024-11-22 00:36:41,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-11-22 00:36:41,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None 2024-11-22 00:36:41,515 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2024-11-22 00:36:41,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2024-11-22 00:36:42,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2024-11-22 00:36:42,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2024-11-22 00:36:43,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-22 00:36:43,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-22 00:36:43,986 [ scc.repo] DEBUG ## Branches found: 2024-11-22 00:36:43,986 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-11-22 00:36:43,986 [ scc.git] DEBUG Get sha1 of %s 2024-11-22 00:36:43,986 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:36:43,992 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-22 00:36:43,996 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-22 00:36:43,996 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-22 00:36:44,001 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-22 00:36:44,006 [ scc.git] DEBUG Already up to date. 2024-11-22 00:36:44,007 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2024-11-22 00:36:45,838 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-11-22 00:36:45,838 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2024-11-22 00:36:45,843 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2024-11-22 00:36:46,161 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-11-22 00:36:46,161 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2024-11-22 00:36:46,166 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2024-11-22 00:36:46,816 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-11-22 00:36:46,816 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2024-11-22 00:36:46,821 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2024-11-22 00:36:47,133 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-11-22 00:36:47,133 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2024-11-22 00:36:47,138 [ scc.git] DEBUG Calling 'git fetch origin pull/598/head' 2024-11-22 00:36:47,482 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-11-22 00:36:47,482 [ scc.git] DEBUG * branch refs/pull/598/head -> FETCH_HEAD 2024-11-22 00:36:47,487 [ scc.git] DEBUG Calling 'git fetch origin pull/599/head' 2024-11-22 00:36:47,875 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-11-22 00:36:47,875 [ scc.git] DEBUG * branch refs/pull/599/head -> FETCH_HEAD 2024-11-22 00:36:47,880 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head' 2024-11-22 00:36:48,275 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-11-22 00:36:48,275 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD 2024-11-22 00:36:48,280 [ scc.git] DEBUG ## Unique users: [] 2024-11-22 00:36:48,280 [ scc.git] DEBUG Get sha1 of %s 2024-11-22 00:36:48,280 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:36:48,285 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-11-22 00:36:48,293 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:36:48,298 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-11-22 00:36:48,487 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2024-11-22 00:36:48,487 [ scc.git] DEBUG Auto-merging setup.py 2024-11-22 00:36:48,499 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-22 00:36:48,503 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2024-11-22 00:36:48,503 [ scc.git] DEBUG setup.py | 1 + 2024-11-22 00:36:48,503 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2024-11-22 00:36:48,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:36:48,645 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-11-22 00:36:48,654 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:36:48,659 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-11-22 00:36:48,882 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2024-11-22 00:36:48,882 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-11-22 00:36:48,884 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-22 00:36:48,889 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2024-11-22 00:36:48,889 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2024-11-22 00:36:48,889 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2024-11-22 00:36:49,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:36:49,032 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2024-11-22 00:36:49,042 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:36:49,047 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2024-11-22 00:36:49,238 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-22 00:36:49,242 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2024-11-22 00:36:49,242 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-11-22 00:36:49,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:36:49,426 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2024-11-22 00:36:49,436 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:36:49,441 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2024-11-22 00:36:49,633 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-22 00:36:49,637 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2024-11-22 00:36:49,637 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2024-11-22 00:36:49,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:36:49,824 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6f07268f880d6159be0bb56eacb20557305152b6' 2024-11-22 00:36:49,833 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:36:49,837 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 598 (Fix display of ContrastMethod) 6f07268f880d6159be0bb56eacb20557305152b6' 2024-11-22 00:36:49,908 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-22 00:36:49,913 [ scc.git] DEBUG omeroweb/webclient/forms.py | 2 +- 2024-11-22 00:36:49,913 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-11-22 00:36:50,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:36:50,210 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ca710df681e3492d113fcad08e05df1f82e17791' 2024-11-22 00:36:50,218 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:36:50,222 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 599 (Update PyPI publish workflow to use build instead of sdist) ca710df681e3492d113fcad08e05df1f82e17791' 2024-11-22 00:36:50,287 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-22 00:36:50,290 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 4 ++-- 2024-11-22 00:36:50,291 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2024-11-22 00:36:50,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:36:50,593 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f8a449a16e16db1d32aa2e3f703b35e26852c6e4' 2024-11-22 00:36:50,602 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:36:50,606 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Remove Python 3.8 from the testing matrix) f8a449a16e16db1d32aa2e3f703b35e26852c6e4' 2024-11-22 00:36:50,624 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-22 00:36:50,627 [ scc.git] DEBUG .github/workflows/tox.yml | 1 - 2024-11-22 00:36:50,628 [ scc.git] DEBUG tox.ini | 3 +-- 2024-11-22 00:36:50,628 [ scc.git] DEBUG 2 files changed, 1 insertion(+), 3 deletions(-) 2024-11-22 00:36:51,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:36:51,009 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-22 00:36:51,047 [ scc.git] DEBUG Get sha1 of %s 2024-11-22 00:36:51,047 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-22 00:36:51,052 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-22 00:36:51,095 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-22 00:36:51,106 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb80dba3be0> has no local changes 2024-11-22 00:36:51,106 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 598 will-moore 'Fix display of ContrastMethod' - PR 599 knabar 'Update PyPI publish workflow to use build instead of sdist' - PR 600 sbesson 'Remove Python 3.8 from the testing matrix' Generated by OMERO-python-superbuild-push#241 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/241/)' 2024-11-22 00:36:51,210 [ scc.git] DEBUG [detached HEAD 2f4d5527b] merge master -Dorg -Ssuccess-only 2024-11-22 00:36:51,211 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-22 00:36:51,211 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-22 00:36:51,260 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2024-11-22 00:36:51,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:36:51,405 [ scc.config] DEBUG Found submodule.omero-marshal.url 2024-11-22 00:36:51,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:36:51,789 [ scc.config] DEBUG Found submodule.omero-py.url 2024-11-22 00:36:52,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:36:52,188 [ scc.config] DEBUG Found submodule.omero-scripts.url 2024-11-22 00:36:52,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:36:52,567 [ scc.config] DEBUG Found submodule.omero-web.url 2024-11-22 00:36:52,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-22 00:36:52,950 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-22 00:36:52,974 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb8110ea820> has local changes 2024-11-22 00:36:52,974 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Updating a4307f4..01fa0c5 Previously merged: - PR 24 jburel 'Build' - PR 25 jburel 'Drop Python 3.8' Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Updating cca4c2f..0e829fa Previously merged: - PR 83 jburel 'Remove py38' Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' - PR 82 jburel 'Build' Repository: ome/omero-py Excluded PRs: - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 427 Rdornier 'Add fileset folder creation' - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers' - PR 434 sbesson 'Remove Python 3.8 from the testing matrix' Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 598 will-moore 'Fix display of ContrastMethod' - PR 599 knabar 'Update PyPI publish workflow to use build instead of sdist' - PR 600 sbesson 'Remove Python 3.8 from the testing matrix' Generated by OMERO-python-superbuild-push#241 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/241/)' 2024-11-22 00:36:53,034 [ scc.git] DEBUG [detached HEAD f2cf4b1] merge master -Dorg -Ssuccess-only 2024-11-22 00:36:53,034 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-11-22 00:36:53,034 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2024-11-22 00:36:53,034 [ scc.merge] INFO Already up to date. 2024-11-22 00:36:53,035 [ scc.merge] INFO 2024-11-22 00:36:53,035 [ scc.merge] INFO 2024-11-22 00:36:53,035 [ scc.merge] INFO Repository: ome/omero-dropbox 2024-11-22 00:36:53,035 [ scc.merge] INFO Updating a4307f4..01fa0c5 2024-11-22 00:36:53,035 [ scc.merge] INFO Previously merged: 2024-11-22 00:36:53,035 [ scc.merge] INFO - PR 24 jburel 'Build' 2024-11-22 00:36:53,035 [ scc.merge] INFO - PR 25 jburel 'Drop Python 3.8' 2024-11-22 00:36:53,035 [ scc.merge] INFO 2024-11-22 00:36:53,035 [ scc.merge] INFO Merged PRs: 2024-11-22 00:36:53,035 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-11-22 00:36:53,035 [ scc.merge] INFO 2024-11-22 00:36:53,035 [ scc.merge] INFO Repository: ome/omero-marshal 2024-11-22 00:36:53,035 [ scc.merge] INFO Excluded PRs: 2024-11-22 00:36:53,035 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2024-11-22 00:36:53,035 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2024-11-22 00:36:53,035 [ scc.merge] INFO Updating cca4c2f..0e829fa 2024-11-22 00:36:53,035 [ scc.merge] INFO Previously merged: 2024-11-22 00:36:53,035 [ scc.merge] INFO - PR 83 jburel 'Remove py38' 2024-11-22 00:36:53,035 [ scc.merge] INFO 2024-11-22 00:36:53,035 [ scc.merge] INFO Merged PRs: 2024-11-22 00:36:53,035 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2024-11-22 00:36:53,035 [ scc.merge] INFO - PR 82 jburel 'Build' 2024-11-22 00:36:53,035 [ scc.merge] INFO 2024-11-22 00:36:53,035 [ scc.merge] INFO Repository: ome/omero-py 2024-11-22 00:36:53,035 [ scc.merge] INFO Excluded PRs: 2024-11-22 00:36:53,035 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller) 2024-11-22 00:36:53,035 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2024-11-22 00:36:53,035 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude) 2024-11-22 00:36:53,035 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) 2024-11-22 00:36:53,035 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) 2024-11-22 00:36:53,035 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) 2024-11-22 00:36:53,035 [ scc.merge] INFO Already up to date. 2024-11-22 00:36:53,035 [ scc.merge] INFO 2024-11-22 00:36:53,035 [ scc.merge] INFO Merged PRs: 2024-11-22 00:36:53,035 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2024-11-22 00:36:53,036 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error' 2024-11-22 00:36:53,036 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-11-22 00:36:53,036 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' 2024-11-22 00:36:53,036 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2024-11-22 00:36:53,036 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-11-22 00:36:53,036 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2024-11-22 00:36:53,036 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2024-11-22 00:36:53,036 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation' 2024-11-22 00:36:53,036 [ scc.merge] INFO - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers' 2024-11-22 00:36:53,036 [ scc.merge] INFO - PR 434 sbesson 'Remove Python 3.8 from the testing matrix' 2024-11-22 00:36:53,036 [ scc.merge] INFO 2024-11-22 00:36:53,036 [ scc.merge] INFO Repository: ome/omero-scripts 2024-11-22 00:36:53,036 [ scc.merge] INFO Excluded PRs: 2024-11-22 00:36:53,036 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-11-22 00:36:53,036 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-11-22 00:36:53,036 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-11-22 00:36:53,036 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-11-22 00:36:53,036 [ scc.merge] INFO Already up to date. 2024-11-22 00:36:53,036 [ scc.merge] INFO 2024-11-22 00:36:53,036 [ scc.merge] INFO Merged PRs: 2024-11-22 00:36:53,036 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-11-22 00:36:53,036 [ scc.merge] INFO 2024-11-22 00:36:53,036 [ scc.merge] INFO Conflicting PRs (not included): 2024-11-22 00:36:53,036 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-11-22 00:36:53,036 [ scc.merge] INFO 2024-11-22 00:36:53,036 [ scc.merge] INFO Repository: ome/omero-web 2024-11-22 00:36:53,036 [ scc.merge] INFO Excluded PRs: 2024-11-22 00:36:53,036 [ scc.merge] INFO - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-11-22 00:36:53,036 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2024-11-22 00:36:53,036 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2024-11-22 00:36:53,036 [ scc.merge] INFO Already up to date. 2024-11-22 00:36:53,036 [ scc.merge] INFO 2024-11-22 00:36:53,036 [ scc.merge] INFO Merged PRs: 2024-11-22 00:36:53,036 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2024-11-22 00:36:53,036 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-11-22 00:36:53,036 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2024-11-22 00:36:53,036 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2024-11-22 00:36:53,036 [ scc.merge] INFO - PR 598 will-moore 'Fix display of ContrastMethod' 2024-11-22 00:36:53,037 [ scc.merge] INFO - PR 599 knabar 'Update PyPI publish workflow to use build instead of sdist' 2024-11-22 00:36:53,037 [ scc.merge] INFO - PR 600 sbesson 'Remove Python 3.8 from the testing matrix' 2024-11-22 00:36:53,037 [ scc.merge] INFO 2024-11-22 00:36:53,037 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-11-22 00:36:53,037 [ scc.git] DEBUG Calling 'git remote' 2024-11-22 00:36:53,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-11-22 00:36:53,041 [ scc.git] DEBUG Calling 'git remote' 2024-11-22 00:36:53,045 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-22 00:36:53,045 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-11-22 00:36:53,045 [ scc.git] DEBUG Calling 'git remote' 2024-11-22 00:36:53,049 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-22 00:36:53,049 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-11-22 00:36:53,049 [ scc.git] DEBUG Calling 'git remote' 2024-11-22 00:36:53,053 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-22 00:36:53,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-11-22 00:36:53,054 [ scc.git] DEBUG Calling 'git remote' 2024-11-22 00:36:53,057 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-22 00:36:53,058 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-11-22 00:36:53,058 [ scc.git] DEBUG Calling 'git remote' 2024-11-22 00:36:53,061 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from a4307f4 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from cca4c2f nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 4fd72efa nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 312afbe nothing to commit, working tree clean Entering 'omero-web' HEAD detached from cbf973052 nothing to commit, working tree clean HEAD detached from 2a94f42 nothing to commit, working tree clean 2024-11-22 00:37:21,801 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS