![[Jenkins]](/jenkins/static/4f42acd4/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 313 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 7d1c1d89a192202bd7b1985d9c9f5c2a915f5656 (refs/remotes/origin/master) Commit message: "Merge pull request #304 from ome/dependabot/submodules/omero-web-96d1138" > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 7d1c1d89a192202bd7b1985d9c9f5c2a915f5656 # timeout=10 > git rev-list --no-walk 7d1c1d89a192202bd7b1985d9c9f5c2a915f5656 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 276 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3 -m venv build/venv > git submodule update --init --recursive omero-scripts # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.3.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.3.1 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.5.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.15-py2.py3-none-any.whl.metadata (5.5 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (34 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.12.14-py3-none-any.whl.metadata (2.3 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.5.0-py3-none-any.whl (375 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.15-py2.py3-none-any.whl (9.9 kB) Using cached certifi-2024.12.14-py3-none-any.whl (164 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (144 kB) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_28_x86_64.whl (4.2 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (82 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.15 PyGithub-2.5.0 PyYAML-6.0.2 certifi-2024.12.14 cffi-1.17.1 charset-normalizer-3.4.0 cryptography-44.0.0 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.17.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-12-18 00:37:03,259 [ scc.config] DEBUG Found github.token 2024-12-18 00:37:03,262 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-12-18 00:37:03,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:37:03,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:37:04,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-12-18 00:37:04,265 [ scc.gh] DEBUG 4691 remaining from 5000 (Reset at 01:12 2024-12-18 00:37:04,266 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-18 00:37:04,269 [ scc.git] DEBUG Check current status 2024-12-18 00:37:04,270 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-18 00:37:04,273 [ scc.git] DEBUG 7d1c1d8 Merge pull request #304 from ome/dependabot/submodules/omero-web-96d1138 2024-12-18 00:37:04,273 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-18 00:37:04,369 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2024-12-18 00:37:04,551 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2024-12-18 00:37:04,918 [ scc.git] DEBUG 7da917a77ea9c1142dc4b992261e79466e897244 omero-py (v5.19.5-11-g7da917a7) 2024-12-18 00:37:04,922 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe) 2024-12-18 00:37:04,962 [ scc.git] DEBUG 96d113830f31142cb272c5a486b048cd185c51bd omero-web (v5.28.0-5-g96d113830) 2024-12-18 00:37:04,966 [ scc.config] DEBUG Found remote.origin.url 2024-12-18 00:37:05,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-12-18 00:37:05,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-18 00:37:06,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-18 00:37:06,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-18 00:37:06,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-18 00:37:06,948 [ scc.git] DEBUG Resetting... 2024-12-18 00:37:06,948 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-12-18 00:37:06,954 [ scc.git] DEBUG HEAD is now at 7d1c1d8 Merge pull request #304 from ome/dependabot/submodules/omero-web-96d1138 2024-12-18 00:37:06,954 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-12-18 00:37:07,004 [ scc.git] DEBUG Check current status 2024-12-18 00:37:07,004 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-18 00:37:07,008 [ scc.git] DEBUG 7d1c1d8 Merge pull request #304 from ome/dependabot/submodules/omero-web-96d1138 2024-12-18 00:37:07,008 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-18 00:37:07,045 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2024-12-18 00:37:07,048 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2024-12-18 00:37:07,052 [ scc.git] DEBUG 7da917a77ea9c1142dc4b992261e79466e897244 omero-py (v5.19.5-11-g7da917a7) 2024-12-18 00:37:07,055 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe) 2024-12-18 00:37:07,059 [ scc.git] DEBUG 96d113830f31142cb272c5a486b048cd185c51bd omero-web (v5.28.0-5-g96d113830) 2024-12-18 00:37:07,059 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-12-18 00:37:07,060 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-12-18 00:37:07,060 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-12-18 00:37:07,060 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-12-18 00:37:07,060 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-12-18 00:37:07,060 [ scc.repo] DEBUG ## PRs found: 2024-12-18 00:37:07,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2024-12-18 00:37:07,364 [ scc.repo] DEBUG ## Branches found: 2024-12-18 00:37:07,364 [ scc.git] DEBUG Get sha1 of %s 2024-12-18 00:37:07,364 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:37:07,368 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-18 00:37:07,371 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-18 00:37:07,371 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-18 00:37:07,375 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-18 00:37:07,378 [ scc.git] DEBUG Already up to date. 2024-12-18 00:37:07,379 [ scc.git] DEBUG ## Unique users: [] 2024-12-18 00:37:07,379 [ scc.git] DEBUG Get sha1 of %s 2024-12-18 00:37:07,379 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:37:07,382 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-18 00:37:07,419 [ scc.git] DEBUG Get sha1 of %s 2024-12-18 00:37:07,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:37:07,423 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-18 00:37:07,998 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f378e8c7e20> has no local changes 2024-12-18 00:37:07,998 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#267 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/267/)' 2024-12-18 00:37:08,023 [ scc.git] DEBUG [detached HEAD 6154f94] merge master -Dorg -Snone 2024-12-18 00:37:08,023 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-12-18 00:37:08,023 [ scc.merge] INFO Already up to date. 2024-12-18 00:37:08,023 [ scc.merge] INFO 2024-12-18 00:37:08,023 [ scc.merge] INFO 2024-12-18 00:37:08,023 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-12-18 00:37:08,023 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' From https://github.com/ome/omero-scripts 312afbe..4b4c755 develop -> origin/develop * [new tag] v5.9.0 -> v5.9.0 Submodule path 'omero-scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-12-18 00:37:10,652 [ scc.config] DEBUG Found github.token 2024-12-18 00:37:10,655 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-12-18 00:37:10,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:37:11,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:37:11,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-12-18 00:37:11,607 [ scc.gh] DEBUG 4683 remaining from 5000 (Reset at 01:12 2024-12-18 00:37:11,607 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-18 00:37:11,611 [ scc.git] DEBUG Check current status 2024-12-18 00:37:11,611 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-18 00:37:11,615 [ scc.git] DEBUG 6154f94 merge master -Dorg -Snone 2024-12-18 00:37:11,615 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-18 00:37:11,651 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2024-12-18 00:37:11,654 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2024-12-18 00:37:11,658 [ scc.git] DEBUG 7da917a77ea9c1142dc4b992261e79466e897244 omero-py (v5.19.5-11-g7da917a7) 2024-12-18 00:37:11,661 [ scc.git] DEBUG +4b4c755af4ccf8a5e709548d1f8415fab48a4867 omero-scripts (v5.9.0-1-g4b4c755) 2024-12-18 00:37:11,665 [ scc.git] DEBUG 96d113830f31142cb272c5a486b048cd185c51bd omero-web (v5.28.0-5-g96d113830) 2024-12-18 00:37:11,668 [ scc.config] DEBUG Found remote.origin.url 2024-12-18 00:37:11,668 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-12-18 00:37:11,670 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-12-18 00:37:12,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-12-18 00:37:12,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-18 00:37:12,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-18 00:37:13,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-18 00:37:13,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-18 00:37:13,821 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-18 00:37:13,866 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-12-18 00:37:13,866 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-18 00:37:13,869 [ scc.git] DEBUG Check current status 2024-12-18 00:37:13,869 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-18 00:37:13,873 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2024-12-18 00:37:13,873 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-18 00:37:13,912 [ scc.config] DEBUG Found remote.origin.url 2024-12-18 00:37:14,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2024-12-18 00:37:14,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-18 00:37:15,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-18 00:37:15,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-18 00:37:16,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-18 00:37:16,041 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-18 00:37:16,077 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-12-18 00:37:16,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-12-18 00:37:16,079 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-18 00:37:16,082 [ scc.git] DEBUG Check current status 2024-12-18 00:37:16,082 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-18 00:37:16,086 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build 2024-12-18 00:37:16,086 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-18 00:37:16,126 [ scc.config] DEBUG Found remote.origin.url 2024-12-18 00:37:16,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2024-12-18 00:37:17,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-18 00:37:17,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-18 00:37:17,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-18 00:37:18,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-18 00:37:18,255 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-18 00:37:18,292 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-12-18 00:37:18,293 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-12-18 00:37:18,293 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-18 00:37:18,297 [ scc.git] DEBUG Check current status 2024-12-18 00:37:18,297 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-18 00:37:18,301 [ scc.git] DEBUG 7da917a7 Merge pull request #439 from tstoeter/patch-1 2024-12-18 00:37:18,301 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-18 00:37:18,337 [ scc.config] DEBUG Found remote.origin.url 2024-12-18 00:37:18,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2024-12-18 00:37:19,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-18 00:37:19,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-18 00:37:20,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-18 00:37:20,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-18 00:37:20,477 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-18 00:37:20,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-12-18 00:37:20,513 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-12-18 00:37:20,513 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-18 00:37:20,516 [ scc.git] DEBUG Check current status 2024-12-18 00:37:20,516 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-18 00:37:20,519 [ scc.git] DEBUG 4b4c755 Bump version: 5.9.0 → 5.9.1.dev0 2024-12-18 00:37:20,520 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-18 00:37:20,556 [ scc.config] DEBUG Found remote.origin.url 2024-12-18 00:37:20,557 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-12-18 00:37:20,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2024-12-18 00:37:21,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-18 00:37:21,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-18 00:37:22,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-18 00:37:22,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-18 00:37:22,699 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-18 00:37:22,736 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-12-18 00:37:22,737 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-12-18 00:37:22,737 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-18 00:37:22,741 [ scc.git] DEBUG Check current status 2024-12-18 00:37:22,741 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-18 00:37:22,745 [ scc.git] DEBUG 96d113830 Merge pull request #601 from jburel/cleanup 2024-12-18 00:37:22,745 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-18 00:37:22,782 [ scc.config] DEBUG Found remote.origin.url 2024-12-18 00:37:23,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2024-12-18 00:37:23,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-18 00:37:24,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-18 00:37:24,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-18 00:37:24,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-18 00:37:24,948 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-18 00:37:24,986 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-12-18 00:37:24,987 [ scc.git] DEBUG Resetting... 2024-12-18 00:37:24,987 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-12-18 00:37:24,992 [ scc.git] DEBUG HEAD is now at 6154f94 merge master -Dorg -Snone 2024-12-18 00:37:24,993 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-12-18 00:37:25,048 [ scc.git] DEBUG Submodule path 'omero-scripts': checked out '312afbed633613e1f728a1fe9eaac096e54318e0' 2024-12-18 00:37:25,054 [ scc.git] DEBUG Check current status 2024-12-18 00:37:25,054 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-18 00:37:25,059 [ scc.git] DEBUG 6154f94 merge master -Dorg -Snone 2024-12-18 00:37:25,059 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-18 00:37:25,099 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2024-12-18 00:37:25,102 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2024-12-18 00:37:25,106 [ scc.git] DEBUG 7da917a77ea9c1142dc4b992261e79466e897244 omero-py (v5.19.5-11-g7da917a7) 2024-12-18 00:37:25,110 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe) 2024-12-18 00:37:25,113 [ scc.git] DEBUG 96d113830f31142cb272c5a486b048cd185c51bd omero-web (v5.28.0-5-g96d113830) 2024-12-18 00:37:25,114 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-12-18 00:37:25,114 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-12-18 00:37:25,114 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-12-18 00:37:25,114 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-12-18 00:37:25,114 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-12-18 00:37:25,114 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-12-18 00:37:25,114 [ scc.repo] DEBUG ## PRs found: 2024-12-18 00:37:25,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2024-12-18 00:37:25,403 [ scc.repo] DEBUG ## Branches found: 2024-12-18 00:37:25,404 [ scc.git] DEBUG Get sha1 of %s 2024-12-18 00:37:25,404 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:37:25,408 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-18 00:37:25,412 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-18 00:37:25,412 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-18 00:37:25,415 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-18 00:37:25,419 [ scc.git] DEBUG Already up to date. 2024-12-18 00:37:25,420 [ scc.git] DEBUG ## Unique users: [] 2024-12-18 00:37:25,420 [ scc.git] DEBUG Get sha1 of %s 2024-12-18 00:37:25,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:37:25,423 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-18 00:37:25,461 [ scc.git] DEBUG Get sha1 of %s 2024-12-18 00:37:25,461 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:37:25,465 [ scc.repo] DEBUG ## PRs found: 2024-12-18 00:37:25,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2024-12-18 00:37:26,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2024-12-18 00:37:26,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2024-12-18 00:37:27,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-12-18 00:37:27,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-18 00:37:28,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-12-18 00:37:28,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2024-12-18 00:37:28,832 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-12-18 00:37:28,832 [ scc.repo] DEBUG ## Branches found: 2024-12-18 00:37:28,832 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-12-18 00:37:28,833 [ scc.git] DEBUG Get sha1 of %s 2024-12-18 00:37:28,833 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:37:28,837 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-18 00:37:28,841 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-18 00:37:28,841 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-18 00:37:28,846 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-18 00:37:28,850 [ scc.git] DEBUG Already up to date. 2024-12-18 00:37:28,850 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2024-12-18 00:37:29,194 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2024-12-18 00:37:29,194 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2024-12-18 00:37:29,198 [ scc.git] DEBUG ## Unique users: [] 2024-12-18 00:37:29,198 [ scc.git] DEBUG Get sha1 of %s 2024-12-18 00:37:29,198 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:37:29,203 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-12-18 00:37:29,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:37:29,212 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-12-18 00:37:29,252 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2024-12-18 00:37:29,253 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2024-12-18 00:37:29,253 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2024-12-18 00:37:29,253 [ scc.git] DEBUG Auto-merging src/fsLists.py 2024-12-18 00:37:29,253 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2024-12-18 00:37:29,253 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2024-12-18 00:37:29,253 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2024-12-18 00:37:29,253 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2024-12-18 00:37:29,253 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2024-12-18 00:37:29,253 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-18 00:37:29,257 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2024-12-18 00:37:29,257 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2024-12-18 00:37:29,257 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2024-12-18 00:37:29,257 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2024-12-18 00:37:29,257 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2024-12-18 00:37:29,257 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2024-12-18 00:37:29,257 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2024-12-18 00:37:29,257 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2024-12-18 00:37:29,259 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2024-12-18 00:37:29,259 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2024-12-18 00:37:29,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:37:29,397 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-18 00:37:29,433 [ scc.git] DEBUG Get sha1 of %s 2024-12-18 00:37:29,434 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:37:29,438 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-18 00:37:29,475 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-18 00:37:29,480 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f866a175490> has no local changes 2024-12-18 00:37:29,481 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#267 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/267/)' 2024-12-18 00:37:29,488 [ scc.git] DEBUG [detached HEAD 206fa35] merge master -Dorg -Ssuccess-only 2024-12-18 00:37:29,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-12-18 00:37:29,489 [ scc.repo] DEBUG ## PRs found: 2024-12-18 00:37:29,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2024-12-18 00:37:30,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2024-12-18 00:37:30,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2024-12-18 00:37:31,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2024-12-18 00:37:31,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-12-18 00:37:32,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-18 00:37:32,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-12-18 00:37:33,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2024-12-18 00:37:33,341 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2024-12-18 00:37:33,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2024-12-18 00:37:34,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2024-12-18 00:37:34,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2024-12-18 00:37:35,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2024-12-18 00:37:35,208 [ scc.repo] DEBUG ## Branches found: 2024-12-18 00:37:35,208 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-12-18 00:37:35,208 [ scc.git] DEBUG Get sha1 of %s 2024-12-18 00:37:35,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:37:35,213 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-18 00:37:35,216 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-18 00:37:35,217 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-18 00:37:35,220 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-18 00:37:35,225 [ scc.git] DEBUG Already up to date. 2024-12-18 00:37:35,225 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2024-12-18 00:37:35,989 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2024-12-18 00:37:35,989 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2024-12-18 00:37:35,994 [ scc.git] DEBUG ## Unique users: [] 2024-12-18 00:37:35,994 [ scc.git] DEBUG Get sha1 of %s 2024-12-18 00:37:35,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:37:35,999 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-12-18 00:37:36,005 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:37:36,009 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-12-18 00:37:36,019 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2024-12-18 00:37:36,019 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-18 00:37:36,022 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2024-12-18 00:37:36,022 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2024-12-18 00:37:36,022 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2024-12-18 00:37:36,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:37:36,178 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-18 00:37:36,216 [ scc.git] DEBUG Get sha1 of %s 2024-12-18 00:37:36,216 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:37:36,220 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-18 00:37:36,255 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-18 00:37:36,261 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f866a143e20> has no local changes 2024-12-18 00:37:36,261 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#267 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/267/)' 2024-12-18 00:37:36,269 [ scc.git] DEBUG [detached HEAD cdb20e9] merge master -Dorg -Ssuccess-only 2024-12-18 00:37:36,269 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-12-18 00:37:36,269 [ scc.repo] DEBUG ## PRs found: 2024-12-18 00:37:36,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2024-12-18 00:37:37,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None 2024-12-18 00:37:37,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None 2024-12-18 00:37:38,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None 2024-12-18 00:37:38,428 [ scc.repo] DEBUG # ... Include label: include 2024-12-18 00:37:38,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None 2024-12-18 00:37:39,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-18 00:37:39,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-18 00:37:40,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None 2024-12-18 00:37:40,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1?per_page=1 HTTP/1.1" 200 None 2024-12-18 00:37:41,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None 2024-12-18 00:37:41,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/status HTTP/1.1" 200 None 2024-12-18 00:37:41,658 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation' 2024-12-18 00:37:42,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2024-12-18 00:37:42,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2024-12-18 00:37:43,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-12-18 00:37:43,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-18 00:37:44,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-18 00:37:44,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-12-18 00:37:45,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2024-12-18 00:37:45,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-12-18 00:37:45,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2024-12-18 00:37:45,943 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2024-12-18 00:37:46,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2024-12-18 00:37:46,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2024-12-18 00:37:47,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2024-12-18 00:37:47,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-18 00:37:48,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-18 00:37:48,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2024-12-18 00:37:49,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-12-18 00:37:49,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-18 00:37:50,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-18 00:37:50,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-12-18 00:37:51,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None 2024-12-18 00:37:51,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-12-18 00:37:52,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None 2024-12-18 00:37:52,207 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2024-12-18 00:37:52,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None 2024-12-18 00:37:52,708 [ scc.repo] DEBUG # ... Exclude label: exclude 2024-12-18 00:37:53,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None 2024-12-18 00:37:53,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None 2024-12-18 00:37:54,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-12-18 00:37:54,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-18 00:37:55,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-12-18 00:37:55,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2 2024-12-18 00:37:55,530 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-12-18 00:37:56,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2024-12-18 00:37:56,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2024-12-18 00:37:57,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-12-18 00:37:57,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-18 00:37:58,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-18 00:37:58,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-12-18 00:37:58,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None 2024-12-18 00:37:59,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-12-18 00:37:59,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None 2024-12-18 00:37:59,873 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2024-12-18 00:38:00,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None 2024-12-18 00:38:00,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None 2024-12-18 00:38:01,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2024-12-18 00:38:01,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2024-12-18 00:38:02,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-12-18 00:38:02,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-18 00:38:03,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-12-18 00:38:03,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2 2024-12-18 00:38:03,819 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj' 2024-12-18 00:38:04,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None 2024-12-18 00:38:04,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-12-18 00:38:05,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-18 00:38:05,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-12-18 00:38:06,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2 2024-12-18 00:38:06,232 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-12-18 00:38:06,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None 2024-12-18 00:38:07,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None 2024-12-18 00:38:07,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-12-18 00:38:08,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-18 00:38:08,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-12-18 00:38:09,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2 2024-12-18 00:38:09,128 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error' 2024-12-18 00:38:09,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2024-12-18 00:38:10,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2024-12-18 00:38:10,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-12-18 00:38:11,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-18 00:38:11,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-12-18 00:38:11,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2024-12-18 00:38:11,918 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2024-12-18 00:38:12,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None 2024-12-18 00:38:12,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None 2024-12-18 00:38:13,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None 2024-12-18 00:38:13,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None 2024-12-18 00:38:13,855 [ scc.repo] DEBUG ## Branches found: 2024-12-18 00:38:13,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-12-18 00:38:13,856 [ scc.git] DEBUG Get sha1 of %s 2024-12-18 00:38:13,856 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:38:13,860 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-18 00:38:13,864 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-18 00:38:13,865 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-18 00:38:13,869 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-18 00:38:13,873 [ scc.git] DEBUG Already up to date. 2024-12-18 00:38:13,873 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2024-12-18 00:38:15,095 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-12-18 00:38:15,095 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2024-12-18 00:38:15,100 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head' 2024-12-18 00:38:15,427 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-12-18 00:38:15,427 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD 2024-12-18 00:38:15,431 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head' 2024-12-18 00:38:15,759 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-12-18 00:38:15,759 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD 2024-12-18 00:38:15,764 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head' 2024-12-18 00:38:16,059 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-12-18 00:38:16,059 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD 2024-12-18 00:38:16,063 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2024-12-18 00:38:16,378 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-12-18 00:38:16,378 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2024-12-18 00:38:16,382 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2024-12-18 00:38:16,688 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-12-18 00:38:16,688 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2024-12-18 00:38:16,692 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2024-12-18 00:38:16,977 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-12-18 00:38:16,977 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2024-12-18 00:38:16,982 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2024-12-18 00:38:17,527 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-12-18 00:38:17,527 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2024-12-18 00:38:17,532 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head' 2024-12-18 00:38:18,433 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-12-18 00:38:18,434 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD 2024-12-18 00:38:18,438 [ scc.git] DEBUG ## Unique users: [] 2024-12-18 00:38:18,438 [ scc.git] DEBUG Get sha1 of %s 2024-12-18 00:38:18,438 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:38:18,443 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-12-18 00:38:18,458 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:38:18,463 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-12-18 00:38:18,656 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2024-12-18 00:38:18,656 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2024-12-18 00:38:18,657 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-18 00:38:18,661 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2024-12-18 00:38:18,661 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2024-12-18 00:38:18,661 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2024-12-18 00:38:18,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:38:18,800 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-12-18 00:38:18,813 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:38:18,817 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-12-18 00:38:19,097 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-12-18 00:38:19,097 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py 2024-12-18 00:38:19,098 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-18 00:38:19,108 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------ 2024-12-18 00:38:19,108 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++ 2024-12-18 00:38:19,108 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-) 2024-12-18 00:38:19,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:38:19,339 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-12-18 00:38:19,351 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:38:19,356 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-12-18 00:38:19,405 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py 2024-12-18 00:38:19,406 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-18 00:38:19,408 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++---- 2024-12-18 00:38:19,409 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-) 2024-12-18 00:38:19,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:38:19,729 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a' 2024-12-18 00:38:19,740 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:38:19,744 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a' 2024-12-18 00:38:19,955 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py 2024-12-18 00:38:19,955 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py 2024-12-18 00:38:19,956 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-18 00:38:19,960 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++- 2024-12-18 00:38:19,960 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +- 2024-12-18 00:38:19,960 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-) 2024-12-18 00:38:20,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:38:20,125 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-12-18 00:38:20,136 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:38:20,141 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-12-18 00:38:20,160 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-18 00:38:20,162 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2024-12-18 00:38:20,162 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2024-12-18 00:38:20,162 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2024-12-18 00:38:20,162 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2024-12-18 00:38:20,162 [ scc.git] DEBUG create mode 100644 connect.py 2024-12-18 00:38:20,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:38:20,511 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-12-18 00:38:20,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:38:20,528 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-12-18 00:38:20,799 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py 2024-12-18 00:38:20,800 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-18 00:38:20,803 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++ 2024-12-18 00:38:20,803 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-12-18 00:38:20,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:38:20,948 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2024-12-18 00:38:20,960 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:38:20,963 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2024-12-18 00:38:21,103 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2024-12-18 00:38:21,103 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-18 00:38:21,107 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2024-12-18 00:38:21,107 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2024-12-18 00:38:21,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:38:21,341 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2024-12-18 00:38:21,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:38:21,356 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2024-12-18 00:38:21,418 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-12-18 00:38:21,419 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-18 00:38:21,425 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2024-12-18 00:38:21,425 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2024-12-18 00:38:21,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:38:21,733 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1' 2024-12-18 00:38:21,745 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:38:21,749 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1' 2024-12-18 00:38:21,769 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-18 00:38:21,772 [ scc.git] DEBUG .gitignore | 1 + 2024-12-18 00:38:21,772 [ scc.git] DEBUG src/omero/plugins/download.py | 17 ++++++++++++----- 2024-12-18 00:38:21,772 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 5 deletions(-) 2024-12-18 00:38:22,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:38:22,129 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-18 00:38:22,168 [ scc.git] DEBUG Get sha1 of %s 2024-12-18 00:38:22,168 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:38:22,172 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-18 00:38:22,211 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-18 00:38:22,221 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8669051880> has no local changes 2024-12-18 00:38:22,221 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 427 Rdornier 'Add fileset folder creation' Generated by OMERO-python-superbuild-push#267 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/267/)' 2024-12-18 00:38:22,229 [ scc.git] DEBUG [detached HEAD 512c400a] merge master -Dorg -Ssuccess-only 2024-12-18 00:38:22,230 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-12-18 00:38:22,230 [ scc.git] INFO Overriding base-branch from master to develop 2024-12-18 00:38:22,230 [ scc.repo] DEBUG ## PRs found: 2024-12-18 00:38:22,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-12-18 00:38:23,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-12-18 00:38:23,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2024-12-18 00:38:24,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-12-18 00:38:24,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-18 00:38:25,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-18 00:38:25,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-12-18 00:38:25,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-12-18 00:38:25,967 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-12-18 00:38:26,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-12-18 00:38:26,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-12-18 00:38:27,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-12-18 00:38:27,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-18 00:38:28,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-12-18 00:38:28,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-12-18 00:38:28,696 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-12-18 00:38:29,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-12-18 00:38:29,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-12-18 00:38:30,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-12-18 00:38:30,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-12-18 00:38:30,687 [ scc.repo] DEBUG ## Branches found: 2024-12-18 00:38:30,687 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-12-18 00:38:30,687 [ scc.git] DEBUG Get sha1 of %s 2024-12-18 00:38:30,687 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:38:30,693 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-12-18 00:38:30,696 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-18 00:38:30,697 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-12-18 00:38:30,701 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-12-18 00:38:30,714 [ scc.git] DEBUG Updating 312afbe..4b4c755 2024-12-18 00:38:31,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/216 HTTP/1.1" 200 None 2024-12-18 00:38:31,400 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-12-18 00:38:31,844 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2024-12-18 00:38:31,844 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-12-18 00:38:31,849 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-12-18 00:38:32,447 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2024-12-18 00:38:32,447 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-12-18 00:38:32,452 [ scc.git] DEBUG ## Unique users: [] 2024-12-18 00:38:32,452 [ scc.git] DEBUG Get sha1 of %s 2024-12-18 00:38:32,452 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:38:32,458 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-18 00:38:32,464 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:38:32,468 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-18 00:38:32,480 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2024-12-18 00:38:32,480 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-18 00:38:32,480 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-18 00:38:32,484 [ scc.git] DEBUG Calling 'git reset --hard 4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2024-12-18 00:38:32,489 [ scc.git] DEBUG HEAD is now at 4b4c755 Bump version: 5.9.0 → 5.9.1.dev0 2024-12-18 00:38:32,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:38:32,634 [ scc.git] DEBUG Calling 'git merge-base 4b4c755af4ccf8a5e709548d1f8415fab48a4867 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-18 00:38:32,640 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2024-12-18 00:38:32,645 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#267](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/267/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/267/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-12-18 00:38:32,649 [ scc.config] DEBUG Found github.token 2024-12-18 00:38:32,649 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-12-18 00:38:32,649 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-12-18 00:38:32,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:38:32,659 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-12-18 00:38:32,669 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-18 00:38:32,672 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-12-18 00:38:32,672 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-12-18 00:38:33,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:38:33,037 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-18 00:38:33,073 [ scc.git] DEBUG Get sha1 of %s 2024-12-18 00:38:33,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:38:33,077 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-18 00:38:33,112 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-18 00:38:33,117 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f86690516a0> has no local changes 2024-12-18 00:38:33,118 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 312afbe..4b4c755 Previously merged: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#267 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/267/)' 2024-12-18 00:38:33,125 [ scc.git] DEBUG [detached HEAD 43bdeab] merge master -Dorg -Ssuccess-only 2024-12-18 00:38:33,126 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-12-18 00:38:33,126 [ scc.repo] DEBUG ## PRs found: 2024-12-18 00:38:33,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2024-12-18 00:38:34,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2024-12-18 00:38:34,143 [ scc.repo] DEBUG # ... Include label: include 2024-12-18 00:38:34,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2024-12-18 00:38:35,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-18 00:38:35,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-18 00:38:36,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2024-12-18 00:38:36,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2024-12-18 00:38:36,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2024-12-18 00:38:37,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2024-12-18 00:38:37,403 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all ann' 2024-12-18 00:38:37,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/600 HTTP/1.1" 200 None 2024-12-18 00:38:38,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f8a449a16e16db1d32aa2e3f703b35e26852c6e4 HTTP/1.1" 200 None 2024-12-18 00:38:38,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f8a449a16e16db1d32aa2e3f703b35e26852c6e4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-18 00:38:39,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f8a449a16e16db1d32aa2e3f703b35e26852c6e4/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-18 00:38:39,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f8a449a16e16db1d32aa2e3f703b35e26852c6e4 HTTP/1.1" 200 None 2024-12-18 00:38:40,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/f8a449a16e16db1d32aa2e3f703b35e26852c6e4?per_page=1 HTTP/1.1" 200 None 2024-12-18 00:38:40,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f8a449a16e16db1d32aa2e3f703b35e26852c6e4 HTTP/1.1" 200 None 2024-12-18 00:38:41,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f8a449a16e16db1d32aa2e3f703b35e26852c6e4/status HTTP/1.1" 200 None 2024-12-18 00:38:41,090 [ scc.repo] DEBUG - PR 600 sbesson 'Remove Python 3.8 from the testing matrix' 2024-12-18 00:38:41,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/598 HTTP/1.1" 200 None 2024-12-18 00:38:42,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/598/comments HTTP/1.1" 200 None 2024-12-18 00:38:42,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6f07268f880d6159be0bb56eacb20557305152b6 HTTP/1.1" 200 None 2024-12-18 00:38:43,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6f07268f880d6159be0bb56eacb20557305152b6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-18 00:38:43,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6f07268f880d6159be0bb56eacb20557305152b6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-18 00:38:44,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6f07268f880d6159be0bb56eacb20557305152b6 HTTP/1.1" 200 None 2024-12-18 00:38:44,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6f07268f880d6159be0bb56eacb20557305152b6?per_page=1 HTTP/1.1" 200 None 2024-12-18 00:38:44,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6f07268f880d6159be0bb56eacb20557305152b6 HTTP/1.1" 200 None 2024-12-18 00:38:45,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6f07268f880d6159be0bb56eacb20557305152b6/status HTTP/1.1" 200 None 2024-12-18 00:38:45,482 [ scc.repo] DEBUG - PR 598 will-moore 'Fix display of ContrastMethod' 2024-12-18 00:38:45,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2024-12-18 00:38:46,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2024-12-18 00:38:47,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2024-12-18 00:38:47,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-18 00:38:47,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-18 00:38:48,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2024-12-18 00:38:48,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2024-12-18 00:38:49,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2024-12-18 00:38:49,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2024-12-18 00:38:49,839 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2024-12-18 00:38:50,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2024-12-18 00:38:50,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2024-12-18 00:38:51,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2024-12-18 00:38:51,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-18 00:38:52,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-18 00:38:52,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2024-12-18 00:38:53,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2024-12-18 00:38:53,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2024-12-18 00:38:54,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2024-12-18 00:38:54,061 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2024-12-18 00:38:54,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/585 HTTP/1.1" 200 None 2024-12-18 00:38:54,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2024-12-18 00:38:55,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2024-12-18 00:38:55,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2024-12-18 00:38:56,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2024-12-18 00:38:56,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-12-18 00:38:57,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-18 00:38:57,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-18 00:38:58,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-12-18 00:38:58,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None 2024-12-18 00:38:59,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-12-18 00:38:59,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None 2024-12-18 00:38:59,692 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-12-18 00:39:00,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2024-12-18 00:39:00,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2024-12-18 00:39:01,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-12-18 00:39:01,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-18 00:39:02,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-18 00:39:02,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-12-18 00:39:03,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None 2024-12-18 00:39:03,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-12-18 00:39:03,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None 2024-12-18 00:39:03,984 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2024-12-18 00:39:04,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2024-12-18 00:39:04,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2024-12-18 00:39:05,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2024-12-18 00:39:05,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-18 00:39:06,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-18 00:39:06,489 [ scc.repo] DEBUG ## Branches found: 2024-12-18 00:39:06,489 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-12-18 00:39:06,489 [ scc.git] DEBUG Get sha1 of %s 2024-12-18 00:39:06,489 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:39:06,494 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-18 00:39:06,498 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-18 00:39:06,498 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-18 00:39:06,502 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-18 00:39:06,507 [ scc.git] DEBUG Already up to date. 2024-12-18 00:39:06,507 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2024-12-18 00:39:08,299 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-12-18 00:39:08,299 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2024-12-18 00:39:08,304 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2024-12-18 00:39:08,670 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-12-18 00:39:08,670 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2024-12-18 00:39:08,675 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2024-12-18 00:39:09,568 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-12-18 00:39:09,568 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2024-12-18 00:39:09,572 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2024-12-18 00:39:09,985 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-12-18 00:39:09,986 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2024-12-18 00:39:09,990 [ scc.git] DEBUG Calling 'git fetch origin pull/598/head' 2024-12-18 00:39:10,501 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-12-18 00:39:10,501 [ scc.git] DEBUG * branch refs/pull/598/head -> FETCH_HEAD 2024-12-18 00:39:10,506 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head' 2024-12-18 00:39:10,924 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-12-18 00:39:10,924 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD 2024-12-18 00:39:10,929 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2024-12-18 00:39:11,232 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-12-18 00:39:11,232 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2024-12-18 00:39:11,236 [ scc.git] DEBUG ## Unique users: [] 2024-12-18 00:39:11,236 [ scc.git] DEBUG Get sha1 of %s 2024-12-18 00:39:11,236 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:39:11,241 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-12-18 00:39:11,248 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:39:11,252 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-12-18 00:39:11,333 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2024-12-18 00:39:11,334 [ scc.git] DEBUG Auto-merging setup.py 2024-12-18 00:39:11,335 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-18 00:39:11,339 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2024-12-18 00:39:11,339 [ scc.git] DEBUG setup.py | 1 + 2024-12-18 00:39:11,339 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2024-12-18 00:39:11,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:39:11,478 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-12-18 00:39:11,487 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:39:11,490 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-12-18 00:39:11,592 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2024-12-18 00:39:11,592 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-12-18 00:39:11,593 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-18 00:39:11,596 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2024-12-18 00:39:11,596 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2024-12-18 00:39:11,596 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2024-12-18 00:39:11,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:39:11,867 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2024-12-18 00:39:11,876 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:39:11,879 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2024-12-18 00:39:12,242 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-18 00:39:12,245 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2024-12-18 00:39:12,245 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-12-18 00:39:12,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:39:12,395 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2024-12-18 00:39:12,404 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:39:12,408 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2024-12-18 00:39:12,535 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-18 00:39:12,538 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2024-12-18 00:39:12,538 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2024-12-18 00:39:12,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:39:12,785 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6f07268f880d6159be0bb56eacb20557305152b6' 2024-12-18 00:39:12,794 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:39:12,797 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 598 (Fix display of ContrastMethod) 6f07268f880d6159be0bb56eacb20557305152b6' 2024-12-18 00:39:12,909 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-18 00:39:12,914 [ scc.git] DEBUG omeroweb/webclient/forms.py | 2 +- 2024-12-18 00:39:12,914 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-12-18 00:39:13,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:39:13,172 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f8a449a16e16db1d32aa2e3f703b35e26852c6e4' 2024-12-18 00:39:13,181 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:39:13,184 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Remove Python 3.8 from the testing matrix) f8a449a16e16db1d32aa2e3f703b35e26852c6e4' 2024-12-18 00:39:13,218 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-18 00:39:13,222 [ scc.git] DEBUG .github/workflows/tox.yml | 1 - 2024-12-18 00:39:13,222 [ scc.git] DEBUG tox.ini | 3 +-- 2024-12-18 00:39:13,222 [ scc.git] DEBUG 2 files changed, 1 insertion(+), 3 deletions(-) 2024-12-18 00:39:13,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:39:13,575 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2024-12-18 00:39:13,584 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:39:13,588 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all ann) 9119372e9fef8cab0e212f02685c8715a3307539' 2024-12-18 00:39:13,607 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-18 00:39:13,611 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2024-12-18 00:39:13,611 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2024-12-18 00:39:13,611 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2024-12-18 00:39:13,611 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2024-12-18 00:39:13,611 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2024-12-18 00:39:13,611 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2024-12-18 00:39:13,611 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2024-12-18 00:39:13,611 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2024-12-18 00:39:13,611 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2024-12-18 00:39:13,612 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2024-12-18 00:39:13,612 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2024-12-18 00:39:13,612 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2024-12-18 00:39:13,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:39:13,965 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-18 00:39:14,003 [ scc.git] DEBUG Get sha1 of %s 2024-12-18 00:39:14,003 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-18 00:39:14,007 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-18 00:39:14,043 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-18 00:39:14,053 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8669086f40> has no local changes 2024-12-18 00:39:14,054 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 598 will-moore 'Fix display of ContrastMethod' - PR 600 sbesson 'Remove Python 3.8 from the testing matrix' - PR 602 Tom-TBT 'Inherit all ann' Generated by OMERO-python-superbuild-push#267 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/267/)' 2024-12-18 00:39:14,063 [ scc.git] DEBUG [detached HEAD e23aba998] merge master -Dorg -Ssuccess-only 2024-12-18 00:39:14,064 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-12-18 00:39:14,064 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-18 00:39:14,111 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2024-12-18 00:39:14,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:39:14,448 [ scc.config] DEBUG Found submodule.omero-marshal.url 2024-12-18 00:39:14,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:39:14,843 [ scc.config] DEBUG Found submodule.omero-py.url 2024-12-18 00:39:15,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:39:15,228 [ scc.config] DEBUG Found submodule.omero-scripts.url 2024-12-18 00:39:15,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:39:15,618 [ scc.config] DEBUG Found submodule.omero-web.url 2024-12-18 00:39:16,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-18 00:39:16,010 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-18 00:39:16,035 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f866c4d3e20> has local changes 2024-12-18 00:39:16,035 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 427 Rdornier 'Add fileset folder creation' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 312afbe..4b4c755 Previously merged: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 598 will-moore 'Fix display of ContrastMethod' - PR 600 sbesson 'Remove Python 3.8 from the testing matrix' - PR 602 Tom-TBT 'Inherit all ann' Generated by OMERO-python-superbuild-push#267 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/267/)' 2024-12-18 00:39:16,044 [ scc.git] DEBUG [detached HEAD d17ac27] merge master -Dorg -Ssuccess-only 2024-12-18 00:39:16,044 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-12-18 00:39:16,044 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2024-12-18 00:39:16,044 [ scc.merge] INFO Already up to date. 2024-12-18 00:39:16,044 [ scc.merge] INFO 2024-12-18 00:39:16,044 [ scc.merge] INFO 2024-12-18 00:39:16,044 [ scc.merge] INFO Repository: ome/omero-dropbox 2024-12-18 00:39:16,044 [ scc.merge] INFO Already up to date. 2024-12-18 00:39:16,044 [ scc.merge] INFO 2024-12-18 00:39:16,044 [ scc.merge] INFO Merged PRs: 2024-12-18 00:39:16,044 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-12-18 00:39:16,044 [ scc.merge] INFO 2024-12-18 00:39:16,044 [ scc.merge] INFO Repository: ome/omero-marshal 2024-12-18 00:39:16,045 [ scc.merge] INFO Excluded PRs: 2024-12-18 00:39:16,045 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2024-12-18 00:39:16,045 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2024-12-18 00:39:16,045 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2024-12-18 00:39:16,045 [ scc.merge] INFO Already up to date. 2024-12-18 00:39:16,045 [ scc.merge] INFO 2024-12-18 00:39:16,045 [ scc.merge] INFO Merged PRs: 2024-12-18 00:39:16,045 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2024-12-18 00:39:16,045 [ scc.merge] INFO 2024-12-18 00:39:16,045 [ scc.merge] INFO Repository: ome/omero-py 2024-12-18 00:39:16,045 [ scc.merge] INFO Excluded PRs: 2024-12-18 00:39:16,045 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller) 2024-12-18 00:39:16,045 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2024-12-18 00:39:16,045 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude) 2024-12-18 00:39:16,045 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) 2024-12-18 00:39:16,045 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) 2024-12-18 00:39:16,045 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) 2024-12-18 00:39:16,045 [ scc.merge] INFO Already up to date. 2024-12-18 00:39:16,045 [ scc.merge] INFO 2024-12-18 00:39:16,045 [ scc.merge] INFO Merged PRs: 2024-12-18 00:39:16,045 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2024-12-18 00:39:16,045 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error' 2024-12-18 00:39:16,045 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-12-18 00:39:16,045 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' 2024-12-18 00:39:16,045 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2024-12-18 00:39:16,045 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-12-18 00:39:16,045 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2024-12-18 00:39:16,045 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2024-12-18 00:39:16,045 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation' 2024-12-18 00:39:16,045 [ scc.merge] INFO 2024-12-18 00:39:16,045 [ scc.merge] INFO Repository: ome/omero-scripts 2024-12-18 00:39:16,045 [ scc.merge] INFO Excluded PRs: 2024-12-18 00:39:16,045 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-12-18 00:39:16,045 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-12-18 00:39:16,045 [ scc.merge] INFO Updating 312afbe..4b4c755 2024-12-18 00:39:16,045 [ scc.merge] INFO Previously merged: 2024-12-18 00:39:16,045 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' 2024-12-18 00:39:16,045 [ scc.merge] INFO 2024-12-18 00:39:16,045 [ scc.merge] INFO Merged PRs: 2024-12-18 00:39:16,045 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-12-18 00:39:16,046 [ scc.merge] INFO 2024-12-18 00:39:16,046 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-18 00:39:16,046 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-12-18 00:39:16,046 [ scc.merge] INFO 2024-12-18 00:39:16,046 [ scc.merge] INFO Repository: ome/omero-web 2024-12-18 00:39:16,046 [ scc.merge] INFO Excluded PRs: 2024-12-18 00:39:16,046 [ scc.merge] INFO - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-12-18 00:39:16,046 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2024-12-18 00:39:16,046 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2024-12-18 00:39:16,046 [ scc.merge] INFO Already up to date. 2024-12-18 00:39:16,046 [ scc.merge] INFO 2024-12-18 00:39:16,046 [ scc.merge] INFO Merged PRs: 2024-12-18 00:39:16,046 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2024-12-18 00:39:16,046 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-12-18 00:39:16,046 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2024-12-18 00:39:16,046 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2024-12-18 00:39:16,046 [ scc.merge] INFO - PR 598 will-moore 'Fix display of ContrastMethod' 2024-12-18 00:39:16,046 [ scc.merge] INFO - PR 600 sbesson 'Remove Python 3.8 from the testing matrix' 2024-12-18 00:39:16,046 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all ann' 2024-12-18 00:39:16,046 [ scc.merge] INFO 2024-12-18 00:39:16,046 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-12-18 00:39:16,046 [ scc.git] DEBUG Calling 'git remote' 2024-12-18 00:39:16,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-12-18 00:39:16,050 [ scc.git] DEBUG Calling 'git remote' 2024-12-18 00:39:16,053 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-12-18 00:39:16,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-12-18 00:39:16,054 [ scc.git] DEBUG Calling 'git remote' 2024-12-18 00:39:16,057 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-12-18 00:39:16,057 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-12-18 00:39:16,057 [ scc.git] DEBUG Calling 'git remote' 2024-12-18 00:39:16,061 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-12-18 00:39:16,061 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-12-18 00:39:16,061 [ scc.git] DEBUG Calling 'git remote' 2024-12-18 00:39:16,065 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-12-18 00:39:16,065 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-12-18 00:39:16,065 [ scc.git] DEBUG Calling 'git remote' 2024-12-18 00:39:16,068 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 6d44f66 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 7da917a7 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 312afbe nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 96d113830 nothing to commit, working tree clean HEAD detached from 7d1c1d8 nothing to commit, working tree clean 2024-12-18 00:39:44,415 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS