![[Jenkins]](/jenkins/static/9bac06d9/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 352 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision d392493f4cba2796226db2dc2ee9d4e1592cafd6 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f d392493f4cba2796226db2dc2ee9d4e1592cafd6 # timeout=10 Commit message: "Merge pull request #305 from ome/dependabot/submodules/omero-scripts-4b4c755" > git rev-list --no-walk d392493f4cba2796226db2dc2ee9d4e1592cafd6 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 311 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.3.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.3.1 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.5.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.10-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.17-py2.py3-none-any.whl.metadata (5.7 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.12.14-py3-none-any.whl.metadata (2.3 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.2-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.5.0-py3-none-any.whl (375 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.10-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.17-py2.py3-none-any.whl (9.1 kB) Using cached certifi-2024.12.14-py3-none-any.whl (164 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (146 kB) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_28_x86_64.whl (4.2 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.17.2-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (82 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.17 PyGithub-2.5.0 PyYAML-6.0.2 certifi-2024.12.14 cffi-1.17.1 charset-normalizer-3.4.1 cryptography-44.0.0 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.10 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.17.2 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-01-26 01:00:23,035 [ scc.config] DEBUG Found github.token 2025-01-26 01:00:23,038 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-01-26 01:00:23,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:00:23,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:00:23,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-01-26 01:00:23,961 [ scc.gh] DEBUG 4998 remaining from 5000 (Reset at 02:01 2025-01-26 01:00:23,962 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-26 01:00:23,967 [ scc.git] DEBUG Check current status 2025-01-26 01:00:23,967 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-26 01:00:23,971 [ scc.git] DEBUG d392493 Merge pull request #305 from ome/dependabot/submodules/omero-scripts-4b4c755 2025-01-26 01:00:23,971 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-26 01:00:24,020 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-01-26 01:00:24,134 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-01-26 01:00:24,138 [ scc.git] DEBUG 05d52412ff7d6c4e3a515717d2807b1a21bf4291 omero-py (v5.19.6-1-g05d52412) 2025-01-26 01:00:24,142 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 omero-scripts (v5.9.0-1-g4b4c755) 2025-01-26 01:00:24,230 [ scc.git] DEBUG 96d113830f31142cb272c5a486b048cd185c51bd omero-web (v5.28.0-5-g96d113830) 2025-01-26 01:00:24,235 [ scc.config] DEBUG Found remote.origin.url 2025-01-26 01:00:24,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-01-26 01:00:24,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-26 01:00:25,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-26 01:00:25,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-26 01:00:26,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-26 01:00:26,141 [ scc.git] DEBUG Resetting... 2025-01-26 01:00:26,141 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-01-26 01:00:26,147 [ scc.git] DEBUG HEAD is now at d392493 Merge pull request #305 from ome/dependabot/submodules/omero-scripts-4b4c755 2025-01-26 01:00:26,148 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-01-26 01:00:26,203 [ scc.git] DEBUG Check current status 2025-01-26 01:00:26,203 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-26 01:00:26,207 [ scc.git] DEBUG d392493 Merge pull request #305 from ome/dependabot/submodules/omero-scripts-4b4c755 2025-01-26 01:00:26,208 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-26 01:00:26,249 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-01-26 01:00:26,252 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-01-26 01:00:26,255 [ scc.git] DEBUG 05d52412ff7d6c4e3a515717d2807b1a21bf4291 omero-py (v5.19.6-1-g05d52412) 2025-01-26 01:00:26,259 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 omero-scripts (v5.9.0-1-g4b4c755) 2025-01-26 01:00:26,263 [ scc.git] DEBUG 96d113830f31142cb272c5a486b048cd185c51bd omero-web (v5.28.0-5-g96d113830) 2025-01-26 01:00:26,264 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-01-26 01:00:26,264 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-01-26 01:00:26,264 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-01-26 01:00:26,264 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-01-26 01:00:26,264 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-01-26 01:00:26,264 [ scc.repo] DEBUG ## PRs found: 2025-01-26 01:00:26,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-01-26 01:00:26,561 [ scc.repo] DEBUG ## Branches found: 2025-01-26 01:00:26,561 [ scc.git] DEBUG Get sha1 of %s 2025-01-26 01:00:26,561 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:00:26,567 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-26 01:00:26,573 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-26 01:00:26,573 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-26 01:00:26,578 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-26 01:00:26,582 [ scc.git] DEBUG Already up to date. 2025-01-26 01:00:26,583 [ scc.git] DEBUG ## Unique users: [] 2025-01-26 01:00:26,583 [ scc.git] DEBUG Get sha1 of %s 2025-01-26 01:00:26,583 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:00:26,587 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-26 01:00:26,631 [ scc.git] DEBUG Get sha1 of %s 2025-01-26 01:00:26,631 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:00:26,635 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-26 01:00:27,164 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9fb95ba340> has no local changes 2025-01-26 01:00:27,165 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#302 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/302/)' 2025-01-26 01:00:27,194 [ scc.git] DEBUG [detached HEAD 823c272] merge master -Dorg -Snone 2025-01-26 01:00:27,194 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-01-26 01:00:27,194 [ scc.merge] INFO Already up to date. 2025-01-26 01:00:27,194 [ scc.merge] INFO 2025-01-26 01:00:27,194 [ scc.merge] INFO 2025-01-26 01:00:27,194 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-01-26 01:00:27,195 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-01-26 01:00:29,677 [ scc.config] DEBUG Found github.token 2025-01-26 01:00:29,680 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-01-26 01:00:29,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:00:30,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:00:30,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-01-26 01:00:30,598 [ scc.gh] DEBUG 4990 remaining from 5000 (Reset at 02:01 2025-01-26 01:00:30,599 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-26 01:00:30,604 [ scc.git] DEBUG Check current status 2025-01-26 01:00:30,604 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-26 01:00:30,609 [ scc.git] DEBUG 823c272 merge master -Dorg -Snone 2025-01-26 01:00:30,609 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-26 01:00:30,654 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-01-26 01:00:30,657 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-01-26 01:00:30,661 [ scc.git] DEBUG 05d52412ff7d6c4e3a515717d2807b1a21bf4291 omero-py (v5.19.6-1-g05d52412) 2025-01-26 01:00:30,666 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 omero-scripts (v5.9.0-1-g4b4c755) 2025-01-26 01:00:30,670 [ scc.git] DEBUG 96d113830f31142cb272c5a486b048cd185c51bd omero-web (v5.28.0-5-g96d113830) 2025-01-26 01:00:30,675 [ scc.config] DEBUG Found remote.origin.url 2025-01-26 01:00:30,675 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-01-26 01:00:30,677 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-01-26 01:00:31,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-01-26 01:00:31,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-26 01:00:31,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-26 01:00:32,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-26 01:00:32,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-26 01:00:32,763 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-26 01:00:32,812 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-01-26 01:00:32,812 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-26 01:00:32,816 [ scc.git] DEBUG Check current status 2025-01-26 01:00:32,816 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-26 01:00:32,820 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-01-26 01:00:32,820 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-26 01:00:32,865 [ scc.config] DEBUG Found remote.origin.url 2025-01-26 01:00:33,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-01-26 01:00:33,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-26 01:00:34,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-26 01:00:34,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-26 01:00:34,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-26 01:00:34,875 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-26 01:00:34,917 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-26 01:00:34,918 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-01-26 01:00:34,918 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-26 01:00:34,922 [ scc.git] DEBUG Check current status 2025-01-26 01:00:34,923 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-26 01:00:34,927 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build 2025-01-26 01:00:34,927 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-26 01:00:34,973 [ scc.config] DEBUG Found remote.origin.url 2025-01-26 01:00:35,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-01-26 01:00:35,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-26 01:00:36,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-26 01:00:36,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-26 01:00:37,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-26 01:00:37,003 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-26 01:00:37,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-26 01:00:37,044 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-01-26 01:00:37,044 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-26 01:00:37,048 [ scc.git] DEBUG Check current status 2025-01-26 01:00:37,048 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-26 01:00:37,061 [ scc.git] DEBUG 05d52412 Bump version: 5.19.6 → 5.19.7.dev0 2025-01-26 01:00:37,061 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-26 01:00:37,106 [ scc.config] DEBUG Found remote.origin.url 2025-01-26 01:00:37,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-01-26 01:00:37,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-26 01:00:38,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-26 01:00:38,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-26 01:00:39,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-26 01:00:39,128 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-26 01:00:39,170 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-26 01:00:39,171 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-01-26 01:00:39,172 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-26 01:00:39,176 [ scc.git] DEBUG Check current status 2025-01-26 01:00:39,176 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-26 01:00:39,336 [ scc.git] DEBUG 4b4c755 Bump version: 5.9.0 → 5.9.1.dev0 2025-01-26 01:00:39,337 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-26 01:00:39,383 [ scc.config] DEBUG Found remote.origin.url 2025-01-26 01:00:39,383 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-01-26 01:00:39,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-01-26 01:00:40,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-26 01:00:40,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-26 01:00:40,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-26 01:00:41,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-26 01:00:41,217 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-26 01:00:41,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-26 01:00:41,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-01-26 01:00:41,263 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-26 01:00:41,270 [ scc.git] DEBUG Check current status 2025-01-26 01:00:41,271 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-26 01:00:41,286 [ scc.git] DEBUG 96d113830 Merge pull request #601 from jburel/cleanup 2025-01-26 01:00:41,287 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-26 01:00:41,332 [ scc.config] DEBUG Found remote.origin.url 2025-01-26 01:00:41,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-01-26 01:00:42,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-26 01:00:42,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-26 01:00:42,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-26 01:00:43,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-26 01:00:43,384 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-26 01:00:43,425 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-26 01:00:43,425 [ scc.git] DEBUG Resetting... 2025-01-26 01:00:43,425 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-01-26 01:00:43,433 [ scc.git] DEBUG HEAD is now at 823c272 merge master -Dorg -Snone 2025-01-26 01:00:43,433 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-01-26 01:00:43,572 [ scc.git] DEBUG Check current status 2025-01-26 01:00:43,572 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-26 01:00:43,577 [ scc.git] DEBUG 823c272 merge master -Dorg -Snone 2025-01-26 01:00:43,577 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-26 01:00:43,622 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-01-26 01:00:43,625 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-01-26 01:00:43,629 [ scc.git] DEBUG 05d52412ff7d6c4e3a515717d2807b1a21bf4291 omero-py (v5.19.6-1-g05d52412) 2025-01-26 01:00:43,633 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 omero-scripts (v5.9.0-1-g4b4c755) 2025-01-26 01:00:43,636 [ scc.git] DEBUG 96d113830f31142cb272c5a486b048cd185c51bd omero-web (v5.28.0-5-g96d113830) 2025-01-26 01:00:43,637 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-01-26 01:00:43,638 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-01-26 01:00:43,638 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-01-26 01:00:43,638 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-01-26 01:00:43,638 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-01-26 01:00:43,638 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-01-26 01:00:43,638 [ scc.repo] DEBUG ## PRs found: 2025-01-26 01:00:43,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-01-26 01:00:43,802 [ scc.repo] DEBUG ## Branches found: 2025-01-26 01:00:43,802 [ scc.git] DEBUG Get sha1 of %s 2025-01-26 01:00:43,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:00:43,808 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-26 01:00:43,814 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-26 01:00:43,814 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-26 01:00:43,820 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-26 01:00:43,826 [ scc.git] DEBUG Already up to date. 2025-01-26 01:00:43,826 [ scc.git] DEBUG ## Unique users: [] 2025-01-26 01:00:43,826 [ scc.git] DEBUG Get sha1 of %s 2025-01-26 01:00:43,826 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:00:43,831 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-26 01:00:43,878 [ scc.git] DEBUG Get sha1 of %s 2025-01-26 01:00:43,879 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:00:43,885 [ scc.repo] DEBUG ## PRs found: 2025-01-26 01:00:44,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-01-26 01:00:44,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-01-26 01:00:45,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-01-26 01:00:45,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-01-26 01:00:46,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:00:46,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-01-26 01:00:46,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-01-26 01:00:46,919 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-01-26 01:00:46,919 [ scc.repo] DEBUG ## Branches found: 2025-01-26 01:00:46,919 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-01-26 01:00:46,919 [ scc.git] DEBUG Get sha1 of %s 2025-01-26 01:00:46,919 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:00:46,924 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-26 01:00:46,930 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-26 01:00:46,930 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-26 01:00:46,935 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-26 01:00:46,940 [ scc.git] DEBUG Already up to date. 2025-01-26 01:00:46,941 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-01-26 01:00:47,547 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-01-26 01:00:47,547 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-01-26 01:00:47,552 [ scc.git] DEBUG ## Unique users: [] 2025-01-26 01:00:47,552 [ scc.git] DEBUG Get sha1 of %s 2025-01-26 01:00:47,552 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:00:47,557 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-01-26 01:00:47,563 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:00:47,566 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-01-26 01:00:48,113 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-01-26 01:00:48,113 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-01-26 01:00:48,113 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-01-26 01:00:48,113 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-01-26 01:00:48,113 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-01-26 01:00:48,113 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-01-26 01:00:48,114 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-01-26 01:00:48,114 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-01-26 01:00:48,114 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-01-26 01:00:48,128 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-26 01:00:48,132 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-01-26 01:00:48,132 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-01-26 01:00:48,132 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-01-26 01:00:48,132 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-01-26 01:00:48,132 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-01-26 01:00:48,132 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-01-26 01:00:48,132 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-01-26 01:00:48,132 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-01-26 01:00:48,132 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-01-26 01:00:48,132 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-01-26 01:00:48,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:00:48,265 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-26 01:00:48,316 [ scc.git] DEBUG Get sha1 of %s 2025-01-26 01:00:48,316 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:00:48,321 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-26 01:00:48,362 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-26 01:00:48,368 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fce54a08370> has no local changes 2025-01-26 01:00:48,368 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#302 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/302/)' 2025-01-26 01:00:48,375 [ scc.git] DEBUG [detached HEAD 2562518] merge master -Dorg -Ssuccess-only 2025-01-26 01:00:48,376 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-26 01:00:48,376 [ scc.repo] DEBUG ## PRs found: 2025-01-26 01:00:48,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-01-26 01:00:49,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-01-26 01:00:49,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-01-26 01:00:50,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-01-26 01:00:50,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-01-26 01:00:51,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:00:51,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-01-26 01:00:51,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-01-26 01:00:51,966 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-01-26 01:00:52,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-01-26 01:00:52,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-01-26 01:00:53,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-01-26 01:00:53,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-01-26 01:00:53,795 [ scc.repo] DEBUG ## Branches found: 2025-01-26 01:00:53,796 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-01-26 01:00:53,796 [ scc.git] DEBUG Get sha1 of %s 2025-01-26 01:00:53,796 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:00:53,802 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-26 01:00:53,806 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-26 01:00:53,806 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-26 01:00:53,812 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-26 01:00:53,817 [ scc.git] DEBUG Already up to date. 2025-01-26 01:00:53,817 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-01-26 01:00:54,256 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-01-26 01:00:54,256 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-01-26 01:00:54,261 [ scc.git] DEBUG ## Unique users: [] 2025-01-26 01:00:54,261 [ scc.git] DEBUG Get sha1 of %s 2025-01-26 01:00:54,262 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:00:54,267 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-01-26 01:00:54,274 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:00:54,278 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-01-26 01:00:54,293 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-01-26 01:00:54,293 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-26 01:00:54,296 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-01-26 01:00:54,296 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-01-26 01:00:54,296 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-01-26 01:00:54,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:00:54,427 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-26 01:00:54,468 [ scc.git] DEBUG Get sha1 of %s 2025-01-26 01:00:54,468 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:00:54,472 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-26 01:00:54,515 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-26 01:00:54,522 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fce54a08550> has no local changes 2025-01-26 01:00:54,522 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#302 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/302/)' 2025-01-26 01:00:54,529 [ scc.git] DEBUG [detached HEAD 72d288d] merge master -Dorg -Ssuccess-only 2025-01-26 01:00:54,530 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-26 01:00:54,530 [ scc.repo] DEBUG ## PRs found: 2025-01-26 01:00:55,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-01-26 01:00:55,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None 2025-01-26 01:00:56,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None 2025-01-26 01:00:56,007 [ scc.repo] DEBUG # ... Include label: include 2025-01-26 01:00:56,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None 2025-01-26 01:00:56,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:00:57,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-26 01:00:58,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None 2025-01-26 01:00:58,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1?per_page=1 HTTP/1.1" 200 None 2025-01-26 01:00:58,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None 2025-01-26 01:00:59,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/status HTTP/1.1" 200 None 2025-01-26 01:00:59,285 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation' 2025-01-26 01:00:59,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-01-26 01:01:00,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-01-26 01:01:00,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-01-26 01:01:01,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:01:01,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-26 01:01:02,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-01-26 01:01:02,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2025-01-26 01:01:03,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-01-26 01:01:03,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2025-01-26 01:01:03,483 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-01-26 01:01:03,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-01-26 01:01:04,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-01-26 01:01:04,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-01-26 01:01:05,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:01:05,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-26 01:01:06,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-01-26 01:01:06,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-01-26 01:01:07,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:01:07,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-26 01:01:08,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-01-26 01:01:08,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None 2025-01-26 01:01:08,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-01-26 01:01:09,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None 2025-01-26 01:01:09,399 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-01-26 01:01:09,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None 2025-01-26 01:01:09,866 [ scc.repo] DEBUG # ... Exclude label: exclude 2025-01-26 01:01:10,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None 2025-01-26 01:01:10,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None 2025-01-26 01:01:11,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2025-01-26 01:01:11,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:01:12,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2025-01-26 01:01:12,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2 2025-01-26 01:01:12,469 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2025-01-26 01:01:12,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-01-26 01:01:13,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-01-26 01:01:13,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-01-26 01:01:14,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:01:14,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-26 01:01:15,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-01-26 01:01:15,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None 2025-01-26 01:01:16,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-01-26 01:01:16,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None 2025-01-26 01:01:16,544 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-01-26 01:01:17,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None 2025-01-26 01:01:17,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None 2025-01-26 01:01:17,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-01-26 01:01:18,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-01-26 01:01:18,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2025-01-26 01:01:19,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:01:19,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2025-01-26 01:01:20,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2 2025-01-26 01:01:20,283 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj' 2025-01-26 01:01:20,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None 2025-01-26 01:01:21,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2025-01-26 01:01:21,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:01:22,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2025-01-26 01:01:22,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2 2025-01-26 01:01:22,449 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2025-01-26 01:01:22,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None 2025-01-26 01:01:23,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None 2025-01-26 01:01:23,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2025-01-26 01:01:24,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:01:24,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2025-01-26 01:01:25,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2 2025-01-26 01:01:25,140 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error' 2025-01-26 01:01:25,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-01-26 01:01:26,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-01-26 01:01:26,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-01-26 01:01:26,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:01:27,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-01-26 01:01:27,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-01-26 01:01:27,826 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-01-26 01:01:28,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None 2025-01-26 01:01:28,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None 2025-01-26 01:01:29,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None 2025-01-26 01:01:29,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None 2025-01-26 01:01:29,672 [ scc.repo] DEBUG ## Branches found: 2025-01-26 01:01:29,672 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-01-26 01:01:29,672 [ scc.git] DEBUG Get sha1 of %s 2025-01-26 01:01:29,672 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:01:29,678 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-26 01:01:29,682 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-26 01:01:29,683 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-26 01:01:29,687 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-26 01:01:29,693 [ scc.git] DEBUG Already up to date. 2025-01-26 01:01:29,693 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-01-26 01:01:31,980 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-01-26 01:01:31,981 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-01-26 01:01:31,987 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head' 2025-01-26 01:01:32,307 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-01-26 01:01:32,307 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD 2025-01-26 01:01:32,313 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head' 2025-01-26 01:01:33,415 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-01-26 01:01:33,415 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD 2025-01-26 01:01:33,421 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head' 2025-01-26 01:01:33,713 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-01-26 01:01:33,713 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD 2025-01-26 01:01:33,719 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-01-26 01:01:34,027 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-01-26 01:01:34,027 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-01-26 01:01:34,033 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2025-01-26 01:01:34,330 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-01-26 01:01:34,330 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2025-01-26 01:01:34,335 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-01-26 01:01:34,650 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-01-26 01:01:34,651 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-01-26 01:01:34,656 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-01-26 01:01:35,357 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-01-26 01:01:35,357 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-01-26 01:01:35,364 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head' 2025-01-26 01:01:36,804 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-01-26 01:01:36,804 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD 2025-01-26 01:01:36,810 [ scc.git] DEBUG ## Unique users: [] 2025-01-26 01:01:36,811 [ scc.git] DEBUG Get sha1 of %s 2025-01-26 01:01:36,811 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:01:36,816 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-01-26 01:01:36,829 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:01:36,833 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-01-26 01:01:37,085 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-01-26 01:01:37,086 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-01-26 01:01:37,087 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-26 01:01:37,092 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-01-26 01:01:37,092 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-01-26 01:01:37,092 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-01-26 01:01:37,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:01:37,222 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2025-01-26 01:01:37,235 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:01:37,240 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2025-01-26 01:01:37,492 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-01-26 01:01:37,493 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py 2025-01-26 01:01:37,493 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-26 01:01:37,501 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------ 2025-01-26 01:01:37,502 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++ 2025-01-26 01:01:37,502 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-) 2025-01-26 01:01:37,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:01:37,632 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f' 2025-01-26 01:01:37,646 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:01:37,651 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f' 2025-01-26 01:01:37,854 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py 2025-01-26 01:01:37,855 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-26 01:01:37,858 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++---- 2025-01-26 01:01:37,858 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-) 2025-01-26 01:01:38,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:01:38,006 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a' 2025-01-26 01:01:38,019 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:01:38,024 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a' 2025-01-26 01:01:38,528 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py 2025-01-26 01:01:38,528 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py 2025-01-26 01:01:38,529 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-26 01:01:38,533 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++- 2025-01-26 01:01:38,533 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +- 2025-01-26 01:01:38,533 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-) 2025-01-26 01:01:38,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:01:38,661 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-01-26 01:01:38,674 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:01:38,679 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-01-26 01:01:38,718 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-26 01:01:38,721 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-01-26 01:01:38,721 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-01-26 01:01:38,721 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-01-26 01:01:38,721 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-01-26 01:01:38,721 [ scc.git] DEBUG create mode 100644 connect.py 2025-01-26 01:01:39,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:01:39,042 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5' 2025-01-26 01:01:39,054 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:01:39,060 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5' 2025-01-26 01:01:39,449 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py 2025-01-26 01:01:39,451 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-26 01:01:39,454 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++ 2025-01-26 01:01:39,454 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2025-01-26 01:01:39,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:01:39,600 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-01-26 01:01:39,614 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:01:39,620 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-01-26 01:01:39,877 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-01-26 01:01:39,879 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-26 01:01:39,883 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-01-26 01:01:39,883 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-01-26 01:01:40,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:01:40,018 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-01-26 01:01:40,031 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:01:40,036 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-01-26 01:01:40,210 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-01-26 01:01:40,211 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-26 01:01:40,218 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-01-26 01:01:40,219 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-01-26 01:01:40,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:01:40,403 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1' 2025-01-26 01:01:40,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:01:40,426 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1' 2025-01-26 01:01:40,454 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-26 01:01:40,457 [ scc.git] DEBUG .gitignore | 1 + 2025-01-26 01:01:40,457 [ scc.git] DEBUG src/omero/plugins/download.py | 17 ++++++++++++----- 2025-01-26 01:01:40,457 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 5 deletions(-) 2025-01-26 01:01:40,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:01:40,788 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-26 01:01:40,830 [ scc.git] DEBUG Get sha1 of %s 2025-01-26 01:01:40,830 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:01:40,835 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-26 01:01:40,875 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-26 01:01:40,885 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fce54148c40> has no local changes 2025-01-26 01:01:40,885 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 427 Rdornier 'Add fileset folder creation' Generated by OMERO-python-superbuild-push#302 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/302/)' 2025-01-26 01:01:40,904 [ scc.git] DEBUG [detached HEAD 0cc4b2a0] merge master -Dorg -Ssuccess-only 2025-01-26 01:01:40,905 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-26 01:01:40,905 [ scc.git] INFO Overriding base-branch from master to develop 2025-01-26 01:01:40,905 [ scc.repo] DEBUG ## PRs found: 2025-01-26 01:01:41,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-01-26 01:01:41,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-01-26 01:01:42,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-01-26 01:01:42,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-01-26 01:01:43,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:01:43,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-26 01:01:44,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-01-26 01:01:44,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-01-26 01:01:44,532 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-01-26 01:01:44,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-01-26 01:01:45,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-01-26 01:01:45,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-01-26 01:01:46,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:01:46,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-01-26 01:01:47,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-01-26 01:01:47,254 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-01-26 01:01:47,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-01-26 01:01:48,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-01-26 01:01:48,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-01-26 01:01:49,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-01-26 01:01:49,153 [ scc.repo] DEBUG ## Branches found: 2025-01-26 01:01:49,153 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-01-26 01:01:49,153 [ scc.git] DEBUG Get sha1 of %s 2025-01-26 01:01:49,153 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:01:49,158 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-01-26 01:01:49,162 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-26 01:01:49,163 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-01-26 01:01:49,168 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-01-26 01:01:49,172 [ scc.git] DEBUG Already up to date. 2025-01-26 01:01:49,173 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-01-26 01:01:49,706 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-01-26 01:01:49,706 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-01-26 01:01:49,711 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-01-26 01:01:50,623 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-01-26 01:01:50,623 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-01-26 01:01:50,628 [ scc.git] DEBUG ## Unique users: [] 2025-01-26 01:01:50,628 [ scc.git] DEBUG Get sha1 of %s 2025-01-26 01:01:50,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:01:50,634 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-01-26 01:01:50,641 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:01:50,646 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-01-26 01:01:50,853 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-01-26 01:01:50,854 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-26 01:01:50,854 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-26 01:01:50,860 [ scc.git] DEBUG Calling 'git reset --hard 4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-01-26 01:01:50,865 [ scc.git] DEBUG HEAD is now at 4b4c755 Bump version: 5.9.0 → 5.9.1.dev0 2025-01-26 01:01:50,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:01:51,002 [ scc.git] DEBUG Calling 'git merge-base 4b4c755af4ccf8a5e709548d1f8415fab48a4867 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-01-26 01:01:51,010 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-01-26 01:01:51,017 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#302](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/302/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/302/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-01-26 01:01:51,022 [ scc.config] DEBUG Found github.token 2025-01-26 01:01:51,022 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-01-26 01:01:51,022 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-01-26 01:01:51,029 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:01:51,034 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-01-26 01:01:51,099 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-26 01:01:51,102 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-01-26 01:01:51,102 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-01-26 01:01:51,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:01:51,384 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-26 01:01:51,428 [ scc.git] DEBUG Get sha1 of %s 2025-01-26 01:01:51,429 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:01:51,434 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-26 01:01:51,474 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-26 01:01:51,482 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fce541269d0> has no local changes 2025-01-26 01:01:51,482 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#302 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/302/)' 2025-01-26 01:01:51,489 [ scc.git] DEBUG [detached HEAD 13ce164] merge master -Dorg -Ssuccess-only 2025-01-26 01:01:51,490 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-26 01:01:51,490 [ scc.repo] DEBUG ## PRs found: 2025-01-26 01:01:51,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-01-26 01:01:52,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/605 HTTP/1.1" 200 None 2025-01-26 01:01:52,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4fc2c03f0e2f692b4fca3d2aacb0f94e13079b4a HTTP/1.1" 200 None 2025-01-26 01:01:53,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4fc2c03f0e2f692b4fca3d2aacb0f94e13079b4a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:01:53,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4fc2c03f0e2f692b4fca3d2aacb0f94e13079b4a/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-26 01:01:54,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4fc2c03f0e2f692b4fca3d2aacb0f94e13079b4a HTTP/1.1" 200 None 2025-01-26 01:01:54,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/4fc2c03f0e2f692b4fca3d2aacb0f94e13079b4a?per_page=1 HTTP/1.1" 200 None 2025-01-26 01:01:55,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4fc2c03f0e2f692b4fca3d2aacb0f94e13079b4a HTTP/1.1" 200 None 2025-01-26 01:01:55,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4fc2c03f0e2f692b4fca3d2aacb0f94e13079b4a/status HTTP/1.1" 200 None 2025-01-26 01:01:55,533 [ scc.repo] DEBUG - PR 605 sbesson 'Do not strip leading or trailing whitespaces in password fields' 2025-01-26 01:01:55,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-01-26 01:01:56,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-01-26 01:01:56,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:01:57,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-26 01:01:57,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-01-26 01:01:58,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-01-26 01:01:58,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-01-26 01:01:59,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-01-26 01:01:59,173 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-01-26 01:01:59,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/603 HTTP/1.1" 200 None 2025-01-26 01:02:00,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/603/comments HTTP/1.1" 200 None 2025-01-26 01:02:00,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e30c293a9ca4894225e46e23bc496ce11524038e HTTP/1.1" 200 None 2025-01-26 01:02:01,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e30c293a9ca4894225e46e23bc496ce11524038e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:02:01,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e30c293a9ca4894225e46e23bc496ce11524038e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-26 01:02:02,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e30c293a9ca4894225e46e23bc496ce11524038e HTTP/1.1" 200 None 2025-01-26 01:02:02,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/e30c293a9ca4894225e46e23bc496ce11524038e?per_page=1 HTTP/1.1" 200 None 2025-01-26 01:02:02,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e30c293a9ca4894225e46e23bc496ce11524038e HTTP/1.1" 200 None 2025-01-26 01:02:03,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e30c293a9ca4894225e46e23bc496ce11524038e/status HTTP/1.1" 200 None 2025-01-26 01:02:03,352 [ scc.repo] DEBUG - PR 603 will-moore 'Don't use group -1 for luts_png' 2025-01-26 01:02:03,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-01-26 01:02:03,802 [ scc.repo] DEBUG # ... Include label: include 2025-01-26 01:02:04,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-01-26 01:02:04,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:02:05,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-26 01:02:05,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-01-26 01:02:06,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-01-26 01:02:06,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-01-26 01:02:06,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-01-26 01:02:06,993 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all ann' 2025-01-26 01:02:07,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/600 HTTP/1.1" 200 None 2025-01-26 01:02:07,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f8a449a16e16db1d32aa2e3f703b35e26852c6e4 HTTP/1.1" 200 None 2025-01-26 01:02:08,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f8a449a16e16db1d32aa2e3f703b35e26852c6e4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:02:08,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f8a449a16e16db1d32aa2e3f703b35e26852c6e4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-26 01:02:09,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f8a449a16e16db1d32aa2e3f703b35e26852c6e4 HTTP/1.1" 200 None 2025-01-26 01:02:09,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/f8a449a16e16db1d32aa2e3f703b35e26852c6e4?per_page=1 HTTP/1.1" 200 None 2025-01-26 01:02:10,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f8a449a16e16db1d32aa2e3f703b35e26852c6e4 HTTP/1.1" 200 None 2025-01-26 01:02:10,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f8a449a16e16db1d32aa2e3f703b35e26852c6e4/status HTTP/1.1" 200 None 2025-01-26 01:02:10,639 [ scc.repo] DEBUG - PR 600 sbesson 'Remove Python 3.8 from the testing matrix' 2025-01-26 01:02:11,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/598 HTTP/1.1" 200 None 2025-01-26 01:02:11,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/598/comments HTTP/1.1" 200 None 2025-01-26 01:02:12,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6f07268f880d6159be0bb56eacb20557305152b6 HTTP/1.1" 200 None 2025-01-26 01:02:12,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6f07268f880d6159be0bb56eacb20557305152b6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:02:12,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6f07268f880d6159be0bb56eacb20557305152b6/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-26 01:02:13,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6f07268f880d6159be0bb56eacb20557305152b6 HTTP/1.1" 200 None 2025-01-26 01:02:13,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6f07268f880d6159be0bb56eacb20557305152b6?per_page=1 HTTP/1.1" 200 None 2025-01-26 01:02:14,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6f07268f880d6159be0bb56eacb20557305152b6 HTTP/1.1" 200 None 2025-01-26 01:02:14,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6f07268f880d6159be0bb56eacb20557305152b6/status HTTP/1.1" 200 None 2025-01-26 01:02:14,771 [ scc.repo] DEBUG - PR 598 will-moore 'Fix display of ContrastMethod' 2025-01-26 01:02:15,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-01-26 01:02:15,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-01-26 01:02:16,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-01-26 01:02:16,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:02:17,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-26 01:02:17,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-01-26 01:02:18,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-01-26 01:02:18,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-01-26 01:02:18,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-01-26 01:02:18,892 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-01-26 01:02:19,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-01-26 01:02:19,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-01-26 01:02:20,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-01-26 01:02:20,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:02:21,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-26 01:02:21,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-01-26 01:02:22,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-01-26 01:02:22,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-01-26 01:02:23,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-01-26 01:02:23,058 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-01-26 01:02:23,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/585 HTTP/1.1" 200 None 2025-01-26 01:02:23,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-01-26 01:02:24,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-01-26 01:02:24,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-01-26 01:02:25,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-01-26 01:02:25,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-01-26 01:02:26,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:02:26,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-26 01:02:27,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-01-26 01:02:27,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None 2025-01-26 01:02:28,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-01-26 01:02:28,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None 2025-01-26 01:02:28,553 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-01-26 01:02:29,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-01-26 01:02:29,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-01-26 01:02:29,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-01-26 01:02:30,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:02:30,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-26 01:02:31,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-01-26 01:02:31,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None 2025-01-26 01:02:32,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-01-26 01:02:32,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None 2025-01-26 01:02:32,590 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-01-26 01:02:33,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-01-26 01:02:33,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-01-26 01:02:33,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-01-26 01:02:34,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-26 01:02:34,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-26 01:02:34,901 [ scc.repo] DEBUG ## Branches found: 2025-01-26 01:02:34,901 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-01-26 01:02:34,901 [ scc.git] DEBUG Get sha1 of %s 2025-01-26 01:02:34,901 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:02:34,907 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-26 01:02:34,911 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-26 01:02:34,911 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-26 01:02:34,916 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-26 01:02:34,922 [ scc.git] DEBUG Already up to date. 2025-01-26 01:02:34,922 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-01-26 01:02:37,977 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-01-26 01:02:37,977 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-01-26 01:02:37,983 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-01-26 01:02:38,658 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-01-26 01:02:38,658 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-01-26 01:02:38,664 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-01-26 01:02:39,613 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-01-26 01:02:39,613 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-01-26 01:02:39,620 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-01-26 01:02:40,221 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-01-26 01:02:40,222 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-01-26 01:02:40,228 [ scc.git] DEBUG Calling 'git fetch origin pull/598/head' 2025-01-26 01:02:40,840 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-01-26 01:02:40,840 [ scc.git] DEBUG * branch refs/pull/598/head -> FETCH_HEAD 2025-01-26 01:02:40,849 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head' 2025-01-26 01:02:41,200 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-01-26 01:02:41,200 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD 2025-01-26 01:02:41,205 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-01-26 01:02:41,513 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-01-26 01:02:41,513 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-01-26 01:02:41,519 [ scc.git] DEBUG Calling 'git fetch origin pull/603/head' 2025-01-26 01:02:43,115 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-01-26 01:02:43,115 [ scc.git] DEBUG * branch refs/pull/603/head -> FETCH_HEAD 2025-01-26 01:02:43,122 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-01-26 01:02:43,983 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-01-26 01:02:43,984 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-01-26 01:02:43,991 [ scc.git] DEBUG Calling 'git fetch origin pull/605/head' 2025-01-26 01:02:44,382 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-01-26 01:02:44,383 [ scc.git] DEBUG * branch refs/pull/605/head -> FETCH_HEAD 2025-01-26 01:02:44,388 [ scc.git] DEBUG ## Unique users: [] 2025-01-26 01:02:44,388 [ scc.git] DEBUG Get sha1 of %s 2025-01-26 01:02:44,388 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:02:44,394 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-01-26 01:02:44,404 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:02:44,409 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-01-26 01:02:44,477 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-01-26 01:02:44,477 [ scc.git] DEBUG Auto-merging setup.py 2025-01-26 01:02:44,482 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-26 01:02:44,487 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-01-26 01:02:44,487 [ scc.git] DEBUG setup.py | 1 + 2025-01-26 01:02:44,487 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-01-26 01:02:44,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:02:44,615 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-01-26 01:02:44,625 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:02:44,630 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-01-26 01:02:44,755 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-01-26 01:02:44,755 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-01-26 01:02:44,756 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-26 01:02:44,761 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-01-26 01:02:44,761 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-01-26 01:02:44,762 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-01-26 01:02:44,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:02:44,997 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-01-26 01:02:45,007 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:02:45,013 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-01-26 01:02:45,131 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-26 01:02:45,136 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-01-26 01:02:45,136 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-01-26 01:02:45,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:02:45,375 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-01-26 01:02:45,386 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:02:45,391 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-01-26 01:02:45,483 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-26 01:02:45,487 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-01-26 01:02:45,487 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-01-26 01:02:45,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:02:45,757 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6f07268f880d6159be0bb56eacb20557305152b6' 2025-01-26 01:02:45,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:02:45,772 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 598 (Fix display of ContrastMethod) 6f07268f880d6159be0bb56eacb20557305152b6' 2025-01-26 01:02:45,924 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-26 01:02:45,929 [ scc.git] DEBUG omeroweb/webclient/forms.py | 2 +- 2025-01-26 01:02:45,929 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-01-26 01:02:46,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:02:46,138 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f8a449a16e16db1d32aa2e3f703b35e26852c6e4' 2025-01-26 01:02:46,148 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:02:46,152 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Remove Python 3.8 from the testing matrix) f8a449a16e16db1d32aa2e3f703b35e26852c6e4' 2025-01-26 01:02:46,192 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-26 01:02:46,196 [ scc.git] DEBUG .github/workflows/tox.yml | 1 - 2025-01-26 01:02:46,196 [ scc.git] DEBUG tox.ini | 3 +-- 2025-01-26 01:02:46,196 [ scc.git] DEBUG 2 files changed, 1 insertion(+), 3 deletions(-) 2025-01-26 01:02:46,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:02:46,519 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-01-26 01:02:46,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:02:46,538 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all ann) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-01-26 01:02:46,703 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-26 01:02:46,709 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-01-26 01:02:46,709 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-01-26 01:02:46,709 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-01-26 01:02:46,709 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-01-26 01:02:46,709 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-01-26 01:02:46,709 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-01-26 01:02:46,709 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-01-26 01:02:46,709 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-01-26 01:02:46,709 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-01-26 01:02:46,709 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-01-26 01:02:46,709 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-01-26 01:02:46,709 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-01-26 01:02:46,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:02:46,913 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e30c293a9ca4894225e46e23bc496ce11524038e' 2025-01-26 01:02:46,926 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:02:46,932 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 603 (Don't use group -1 for luts_png) e30c293a9ca4894225e46e23bc496ce11524038e' 2025-01-26 01:02:47,198 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-26 01:02:47,204 [ scc.git] DEBUG omeroweb/webgateway/views.py | 98 ++++++++++++++++++++++++++------------------ 2025-01-26 01:02:47,204 [ scc.git] DEBUG 1 file changed, 57 insertions(+), 41 deletions(-) 2025-01-26 01:02:47,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:02:47,335 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-01-26 01:02:47,350 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:02:47,361 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-01-26 01:02:47,517 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-26 01:02:47,526 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-01-26 01:02:47,526 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-01-26 01:02:47,526 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-01-26 01:02:47,526 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-01-26 01:02:47,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:02:47,724 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4fc2c03f0e2f692b4fca3d2aacb0f94e13079b4a' 2025-01-26 01:02:47,745 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:02:47,758 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 605 (Do not strip leading or trailing whitespaces in password fields) 4fc2c03f0e2f692b4fca3d2aacb0f94e13079b4a' 2025-01-26 01:02:47,843 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-26 01:02:47,847 [ scc.git] DEBUG omeroweb/webadmin/forms.py | 4 ++++ 2025-01-26 01:02:47,847 [ scc.git] DEBUG 1 file changed, 4 insertions(+) 2025-01-26 01:02:48,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:02:48,103 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-26 01:02:48,150 [ scc.git] DEBUG Get sha1 of %s 2025-01-26 01:02:48,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-26 01:02:48,157 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-26 01:02:48,199 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-26 01:02:48,211 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fce54136640> has no local changes 2025-01-26 01:02:48,212 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 598 will-moore 'Fix display of ContrastMethod' - PR 600 sbesson 'Remove Python 3.8 from the testing matrix' - PR 602 Tom-TBT 'Inherit all ann' - PR 603 will-moore 'Don't use group -1 for luts_png' - PR 604 will-moore 'Right panel perf' - PR 605 sbesson 'Do not strip leading or trailing whitespaces in password fields' Generated by OMERO-python-superbuild-push#302 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/302/)' 2025-01-26 01:02:48,224 [ scc.git] DEBUG [detached HEAD 8ddfd5d4a] merge master -Dorg -Ssuccess-only 2025-01-26 01:02:48,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-26 01:02:48,225 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-26 01:02:48,289 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-01-26 01:02:48,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:02:48,502 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-01-26 01:02:48,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:02:48,893 [ scc.config] DEBUG Found submodule.omero-py.url 2025-01-26 01:02:49,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:02:49,273 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-01-26 01:02:49,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:02:49,663 [ scc.config] DEBUG Found submodule.omero-web.url 2025-01-26 01:02:50,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-26 01:02:50,035 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-26 01:02:50,071 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fce549fb340> has local changes 2025-01-26 01:02:50,071 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 427 Rdornier 'Add fileset folder creation' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 598 will-moore 'Fix display of ContrastMethod' - PR 600 sbesson 'Remove Python 3.8 from the testing matrix' - PR 602 Tom-TBT 'Inherit all ann' - PR 603 will-moore 'Don't use group -1 for luts_png' - PR 604 will-moore 'Right panel perf' - PR 605 sbesson 'Do not strip leading or trailing whitespaces in password fields' Generated by OMERO-python-superbuild-push#302 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/302/)' 2025-01-26 01:02:50,082 [ scc.git] DEBUG [detached HEAD 9f338a1] merge master -Dorg -Ssuccess-only 2025-01-26 01:02:50,082 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-01-26 01:02:50,082 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-01-26 01:02:50,082 [ scc.merge] INFO Already up to date. 2025-01-26 01:02:50,082 [ scc.merge] INFO 2025-01-26 01:02:50,082 [ scc.merge] INFO 2025-01-26 01:02:50,082 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-01-26 01:02:50,082 [ scc.merge] INFO Already up to date. 2025-01-26 01:02:50,082 [ scc.merge] INFO 2025-01-26 01:02:50,082 [ scc.merge] INFO Merged PRs: 2025-01-26 01:02:50,082 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-01-26 01:02:50,082 [ scc.merge] INFO 2025-01-26 01:02:50,082 [ scc.merge] INFO Repository: ome/omero-marshal 2025-01-26 01:02:50,082 [ scc.merge] INFO Excluded PRs: 2025-01-26 01:02:50,083 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-01-26 01:02:50,083 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-01-26 01:02:50,083 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-01-26 01:02:50,083 [ scc.merge] INFO Already up to date. 2025-01-26 01:02:50,083 [ scc.merge] INFO 2025-01-26 01:02:50,083 [ scc.merge] INFO Merged PRs: 2025-01-26 01:02:50,083 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-01-26 01:02:50,083 [ scc.merge] INFO 2025-01-26 01:02:50,083 [ scc.merge] INFO Repository: ome/omero-py 2025-01-26 01:02:50,083 [ scc.merge] INFO Excluded PRs: 2025-01-26 01:02:50,083 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-01-26 01:02:50,083 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude) 2025-01-26 01:02:50,083 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) 2025-01-26 01:02:50,083 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) 2025-01-26 01:02:50,083 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) 2025-01-26 01:02:50,083 [ scc.merge] INFO Already up to date. 2025-01-26 01:02:50,083 [ scc.merge] INFO 2025-01-26 01:02:50,083 [ scc.merge] INFO Merged PRs: 2025-01-26 01:02:50,083 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-01-26 01:02:50,083 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error' 2025-01-26 01:02:50,083 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2025-01-26 01:02:50,083 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' 2025-01-26 01:02:50,083 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-01-26 01:02:50,083 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2025-01-26 01:02:50,083 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-01-26 01:02:50,083 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-01-26 01:02:50,083 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation' 2025-01-26 01:02:50,083 [ scc.merge] INFO 2025-01-26 01:02:50,083 [ scc.merge] INFO Repository: ome/omero-scripts 2025-01-26 01:02:50,083 [ scc.merge] INFO Excluded PRs: 2025-01-26 01:02:50,083 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-01-26 01:02:50,083 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-01-26 01:02:50,083 [ scc.merge] INFO Already up to date. 2025-01-26 01:02:50,083 [ scc.merge] INFO 2025-01-26 01:02:50,083 [ scc.merge] INFO Merged PRs: 2025-01-26 01:02:50,084 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-01-26 01:02:50,084 [ scc.merge] INFO 2025-01-26 01:02:50,084 [ scc.merge] INFO Conflicting PRs (not included): 2025-01-26 01:02:50,084 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-01-26 01:02:50,084 [ scc.merge] INFO 2025-01-26 01:02:50,084 [ scc.merge] INFO Repository: ome/omero-web 2025-01-26 01:02:50,084 [ scc.merge] INFO Excluded PRs: 2025-01-26 01:02:50,084 [ scc.merge] INFO - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-01-26 01:02:50,084 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-01-26 01:02:50,084 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2025-01-26 01:02:50,084 [ scc.merge] INFO Already up to date. 2025-01-26 01:02:50,084 [ scc.merge] INFO 2025-01-26 01:02:50,084 [ scc.merge] INFO Merged PRs: 2025-01-26 01:02:50,084 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-01-26 01:02:50,084 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-01-26 01:02:50,084 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-01-26 01:02:50,084 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-01-26 01:02:50,084 [ scc.merge] INFO - PR 598 will-moore 'Fix display of ContrastMethod' 2025-01-26 01:02:50,084 [ scc.merge] INFO - PR 600 sbesson 'Remove Python 3.8 from the testing matrix' 2025-01-26 01:02:50,084 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all ann' 2025-01-26 01:02:50,084 [ scc.merge] INFO - PR 603 will-moore 'Don't use group -1 for luts_png' 2025-01-26 01:02:50,084 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-01-26 01:02:50,084 [ scc.merge] INFO - PR 605 sbesson 'Do not strip leading or trailing whitespaces in password fields' 2025-01-26 01:02:50,084 [ scc.merge] INFO 2025-01-26 01:02:50,084 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-01-26 01:02:50,084 [ scc.git] DEBUG Calling 'git remote' 2025-01-26 01:02:50,089 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-01-26 01:02:50,089 [ scc.git] DEBUG Calling 'git remote' 2025-01-26 01:02:50,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-26 01:02:50,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-01-26 01:02:50,094 [ scc.git] DEBUG Calling 'git remote' 2025-01-26 01:02:50,099 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-26 01:02:50,099 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-01-26 01:02:50,099 [ scc.git] DEBUG Calling 'git remote' 2025-01-26 01:02:50,103 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-26 01:02:50,104 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-01-26 01:02:50,104 [ scc.git] DEBUG Calling 'git remote' 2025-01-26 01:02:50,108 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-26 01:02:50,108 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-01-26 01:02:50,108 [ scc.git] DEBUG Calling 'git remote' 2025-01-26 01:02:50,112 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/usr/lib64/python3.9/urllib/request.py", line 1346, in do_open h.request(req.get_method(), req.selector, req.data, headers, File "/usr/lib64/python3.9/http/client.py", line 1285, in request self._send_request(method, url, body, headers, encode_chunked) File "/usr/lib64/python3.9/http/client.py", line 1331, in _send_request self.endheaders(body, encode_chunked=encode_chunked) File "/usr/lib64/python3.9/http/client.py", line 1280, in endheaders self._send_output(message_body, encode_chunked=encode_chunked) File "/usr/lib64/python3.9/http/client.py", line 1040, in _send_output self.send(msg) File "/usr/lib64/python3.9/http/client.py", line 980, in send self.connect() File "/usr/lib64/python3.9/http/client.py", line 1447, in connect super().connect() File "/usr/lib64/python3.9/http/client.py", line 946, in connect self.sock = self._create_connection( File "/usr/lib64/python3.9/socket.py", line 844, in create_connection raise err File "/usr/lib64/python3.9/socket.py", line 832, in create_connection sock.connect(sa) TimeoutError: [Errno 110] Connection timed out During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 517, in open response = self._open(req, data) File "/usr/lib64/python3.9/urllib/request.py", line 534, in _open result = self._call_chain(self.handle_open, protocol, protocol + File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 1389, in https_open return self.do_open(http.client.HTTPSConnection, req, File "/usr/lib64/python3.9/urllib/request.py", line 1349, in do_open raise URLError(err) urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/usr/lib64/python3.9/urllib/request.py", line 1346, in do_open h.request(req.get_method(), req.selector, req.data, headers, File "/usr/lib64/python3.9/http/client.py", line 1285, in request self._send_request(method, url, body, headers, encode_chunked) File "/usr/lib64/python3.9/http/client.py", line 1331, in _send_request self.endheaders(body, encode_chunked=encode_chunked) File "/usr/lib64/python3.9/http/client.py", line 1280, in endheaders self._send_output(message_body, encode_chunked=encode_chunked) File "/usr/lib64/python3.9/http/client.py", line 1040, in _send_output self.send(msg) File "/usr/lib64/python3.9/http/client.py", line 980, in send self.connect() File "/usr/lib64/python3.9/http/client.py", line 1447, in connect super().connect() File "/usr/lib64/python3.9/http/client.py", line 946, in connect self.sock = self._create_connection( File "/usr/lib64/python3.9/socket.py", line 844, in create_connection raise err File "/usr/lib64/python3.9/socket.py", line 832, in create_connection sock.connect(sa) TimeoutError: [Errno 110] Connection timed out During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 517, in open response = self._open(req, data) File "/usr/lib64/python3.9/urllib/request.py", line 534, in _open result = self._call_chain(self.handle_open, protocol, protocol + File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 1389, in https_open return self.do_open(http.client.HTTPSConnection, req, File "/usr/lib64/python3.9/urllib/request.py", line 1349, in do_open raise URLError(err) urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 6d44f66 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 05d52412 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 96d113830 nothing to commit, working tree clean HEAD detached from d392493 nothing to commit, working tree clean 2025-01-26 01:07:37,793 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS