![[Jenkins]](/jenkins/static/9bac06d9/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 355 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision d392493f4cba2796226db2dc2ee9d4e1592cafd6 (refs/remotes/origin/master) Commit message: "Merge pull request #305 from ome/dependabot/submodules/omero-scripts-4b4c755" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f d392493f4cba2796226db2dc2ee9d4e1592cafd6 # timeout=10 > git rev-list --no-walk d392493f4cba2796226db2dc2ee9d4e1592cafd6 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 314 [Pipeline] sh > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-25.0-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-25.0 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.5.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.10-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.12.14-py3-none-any.whl.metadata (2.3 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.2-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.5.0-py3-none-any.whl (375 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.10-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.18-py2.py3-none-any.whl (10.0 kB) Using cached certifi-2024.12.14-py3-none-any.whl (164 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (146 kB) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_28_x86_64.whl (4.2 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.17.2-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (82 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.18 PyGithub-2.5.0 PyYAML-6.0.2 certifi-2024.12.14 cffi-1.17.1 charset-normalizer-3.4.1 cryptography-44.0.0 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.10 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.17.2 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-01-29 00:38:38,063 [ scc.config] DEBUG Found github.token 2025-01-29 00:38:38,065 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-01-29 00:38:38,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:38:38,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:38:39,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-01-29 00:38:39,014 [ scc.gh] DEBUG 4501 remaining from 5000 (Reset at 00:01 2025-01-29 00:38:39,015 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-29 00:38:39,019 [ scc.git] DEBUG Check current status 2025-01-29 00:38:39,019 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-29 00:38:39,022 [ scc.git] DEBUG d392493 Merge pull request #305 from ome/dependabot/submodules/omero-scripts-4b4c755 2025-01-29 00:38:39,022 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-29 00:38:39,147 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-01-29 00:38:39,263 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-01-29 00:38:39,267 [ scc.git] DEBUG 05d52412ff7d6c4e3a515717d2807b1a21bf4291 omero-py (v5.19.6-1-g05d52412) 2025-01-29 00:38:39,272 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 omero-scripts (v5.9.0-1-g4b4c755) 2025-01-29 00:38:39,383 [ scc.git] DEBUG 96d113830f31142cb272c5a486b048cd185c51bd omero-web (v5.28.0-5-g96d113830) 2025-01-29 00:38:39,390 [ scc.config] DEBUG Found remote.origin.url 2025-01-29 00:38:39,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-01-29 00:38:40,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-29 00:38:40,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-29 00:38:40,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-29 00:38:41,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-29 00:38:41,277 [ scc.git] DEBUG Resetting... 2025-01-29 00:38:41,277 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-01-29 00:38:41,283 [ scc.git] DEBUG HEAD is now at d392493 Merge pull request #305 from ome/dependabot/submodules/omero-scripts-4b4c755 2025-01-29 00:38:41,283 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-01-29 00:38:41,336 [ scc.git] DEBUG Check current status 2025-01-29 00:38:41,336 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-29 00:38:41,340 [ scc.git] DEBUG d392493 Merge pull request #305 from ome/dependabot/submodules/omero-scripts-4b4c755 2025-01-29 00:38:41,340 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-29 00:38:41,381 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-01-29 00:38:41,384 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-01-29 00:38:41,388 [ scc.git] DEBUG 05d52412ff7d6c4e3a515717d2807b1a21bf4291 omero-py (v5.19.6-1-g05d52412) 2025-01-29 00:38:41,392 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 omero-scripts (v5.9.0-1-g4b4c755) 2025-01-29 00:38:41,395 [ scc.git] DEBUG 96d113830f31142cb272c5a486b048cd185c51bd omero-web (v5.28.0-5-g96d113830) 2025-01-29 00:38:41,396 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-01-29 00:38:41,396 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-01-29 00:38:41,396 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-01-29 00:38:41,397 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-01-29 00:38:41,397 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-01-29 00:38:41,397 [ scc.repo] DEBUG ## PRs found: 2025-01-29 00:38:41,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-01-29 00:38:41,696 [ scc.repo] DEBUG ## Branches found: 2025-01-29 00:38:41,696 [ scc.git] DEBUG Get sha1 of %s 2025-01-29 00:38:41,696 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:38:41,700 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-29 00:38:41,704 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-29 00:38:41,704 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-29 00:38:41,708 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-29 00:38:41,712 [ scc.git] DEBUG Already up to date. 2025-01-29 00:38:41,712 [ scc.git] DEBUG ## Unique users: [] 2025-01-29 00:38:41,713 [ scc.git] DEBUG Get sha1 of %s 2025-01-29 00:38:41,713 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:38:41,716 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-29 00:38:41,758 [ scc.git] DEBUG Get sha1 of %s 2025-01-29 00:38:41,758 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:38:41,762 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-29 00:38:42,135 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7859dfa370> has no local changes 2025-01-29 00:38:42,135 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#305 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/305/)' 2025-01-29 00:38:42,165 [ scc.git] DEBUG [detached HEAD 395b6b4] merge master -Dorg -Snone 2025-01-29 00:38:42,166 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-01-29 00:38:42,166 [ scc.merge] INFO Already up to date. 2025-01-29 00:38:42,166 [ scc.merge] INFO 2025-01-29 00:38:42,166 [ scc.merge] INFO 2025-01-29 00:38:42,166 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-01-29 00:38:42,166 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-01-29 00:38:44,565 [ scc.config] DEBUG Found github.token 2025-01-29 00:38:44,568 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-01-29 00:38:44,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:38:45,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:38:45,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-01-29 00:38:45,513 [ scc.gh] DEBUG 4493 remaining from 5000 (Reset at 00:01 2025-01-29 00:38:45,513 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-29 00:38:45,517 [ scc.git] DEBUG Check current status 2025-01-29 00:38:45,518 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-29 00:38:45,522 [ scc.git] DEBUG 395b6b4 merge master -Dorg -Snone 2025-01-29 00:38:45,522 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-29 00:38:45,565 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-01-29 00:38:45,568 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-01-29 00:38:45,572 [ scc.git] DEBUG 05d52412ff7d6c4e3a515717d2807b1a21bf4291 omero-py (v5.19.6-1-g05d52412) 2025-01-29 00:38:45,576 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 omero-scripts (v5.9.0-1-g4b4c755) 2025-01-29 00:38:45,580 [ scc.git] DEBUG 96d113830f31142cb272c5a486b048cd185c51bd omero-web (v5.28.0-5-g96d113830) 2025-01-29 00:38:45,584 [ scc.config] DEBUG Found remote.origin.url 2025-01-29 00:38:45,585 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-01-29 00:38:45,586 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-01-29 00:38:46,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-01-29 00:38:46,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-29 00:38:46,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-29 00:38:47,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-29 00:38:47,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-29 00:38:47,643 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-29 00:38:47,691 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-01-29 00:38:47,691 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-29 00:38:47,695 [ scc.git] DEBUG Check current status 2025-01-29 00:38:47,695 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-29 00:38:47,698 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-01-29 00:38:47,699 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-29 00:38:47,740 [ scc.config] DEBUG Found remote.origin.url 2025-01-29 00:38:48,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-01-29 00:38:48,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-29 00:38:49,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-29 00:38:49,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-29 00:38:49,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-29 00:38:49,832 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-29 00:38:49,871 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-29 00:38:49,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-01-29 00:38:49,872 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-29 00:38:49,875 [ scc.git] DEBUG Check current status 2025-01-29 00:38:49,876 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-29 00:38:49,879 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build 2025-01-29 00:38:49,879 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-29 00:38:49,920 [ scc.config] DEBUG Found remote.origin.url 2025-01-29 00:38:50,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-01-29 00:38:50,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-29 00:38:51,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-29 00:38:51,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-29 00:38:52,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-29 00:38:52,006 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-29 00:38:52,046 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-29 00:38:52,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-01-29 00:38:52,047 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-29 00:38:52,051 [ scc.git] DEBUG Check current status 2025-01-29 00:38:52,051 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-29 00:38:52,055 [ scc.git] DEBUG 05d52412 Bump version: 5.19.6 → 5.19.7.dev0 2025-01-29 00:38:52,056 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-29 00:38:52,099 [ scc.config] DEBUG Found remote.origin.url 2025-01-29 00:38:52,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-01-29 00:38:52,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-29 00:38:53,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-29 00:38:53,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-29 00:38:54,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-29 00:38:54,116 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-29 00:38:54,156 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-29 00:38:54,157 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-01-29 00:38:54,157 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-29 00:38:54,161 [ scc.git] DEBUG Check current status 2025-01-29 00:38:54,161 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-29 00:38:54,165 [ scc.git] DEBUG 4b4c755 Bump version: 5.9.0 → 5.9.1.dev0 2025-01-29 00:38:54,165 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-29 00:38:54,208 [ scc.config] DEBUG Found remote.origin.url 2025-01-29 00:38:54,209 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-01-29 00:38:54,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-01-29 00:38:55,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-29 00:38:55,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-29 00:38:55,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-29 00:38:56,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-29 00:38:56,287 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-29 00:38:56,325 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-29 00:38:56,326 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-01-29 00:38:56,326 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-29 00:38:56,330 [ scc.git] DEBUG Check current status 2025-01-29 00:38:56,330 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-29 00:38:56,334 [ scc.git] DEBUG 96d113830 Merge pull request #601 from jburel/cleanup 2025-01-29 00:38:56,335 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-29 00:38:56,377 [ scc.config] DEBUG Found remote.origin.url 2025-01-29 00:38:56,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-01-29 00:38:57,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-29 00:38:57,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-29 00:38:58,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-29 00:38:58,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-29 00:38:58,394 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-29 00:38:58,434 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-29 00:38:58,434 [ scc.git] DEBUG Resetting... 2025-01-29 00:38:58,434 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-01-29 00:38:58,439 [ scc.git] DEBUG HEAD is now at 395b6b4 merge master -Dorg -Snone 2025-01-29 00:38:58,440 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-01-29 00:38:58,492 [ scc.git] DEBUG Check current status 2025-01-29 00:38:58,493 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-29 00:38:58,503 [ scc.git] DEBUG 395b6b4 merge master -Dorg -Snone 2025-01-29 00:38:58,504 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-29 00:38:58,543 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-01-29 00:38:58,546 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-01-29 00:38:58,549 [ scc.git] DEBUG 05d52412ff7d6c4e3a515717d2807b1a21bf4291 omero-py (v5.19.6-1-g05d52412) 2025-01-29 00:38:58,553 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 omero-scripts (v5.9.0-1-g4b4c755) 2025-01-29 00:38:58,557 [ scc.git] DEBUG 96d113830f31142cb272c5a486b048cd185c51bd omero-web (v5.28.0-5-g96d113830) 2025-01-29 00:38:58,557 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-01-29 00:38:58,558 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-01-29 00:38:58,558 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-01-29 00:38:58,558 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-01-29 00:38:58,558 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-01-29 00:38:58,558 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-01-29 00:38:58,558 [ scc.repo] DEBUG ## PRs found: 2025-01-29 00:38:58,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-01-29 00:38:58,810 [ scc.repo] DEBUG ## Branches found: 2025-01-29 00:38:58,810 [ scc.git] DEBUG Get sha1 of %s 2025-01-29 00:38:58,810 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:38:58,814 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-29 00:38:58,818 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-29 00:38:58,819 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-29 00:38:58,823 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-29 00:38:58,828 [ scc.git] DEBUG Already up to date. 2025-01-29 00:38:58,828 [ scc.git] DEBUG ## Unique users: [] 2025-01-29 00:38:58,828 [ scc.git] DEBUG Get sha1 of %s 2025-01-29 00:38:58,828 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:38:58,835 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-29 00:38:58,877 [ scc.git] DEBUG Get sha1 of %s 2025-01-29 00:38:58,877 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:38:58,881 [ scc.repo] DEBUG ## PRs found: 2025-01-29 00:38:59,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-01-29 00:38:59,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-01-29 00:39:00,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-01-29 00:39:00,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-01-29 00:39:01,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:39:01,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-01-29 00:39:02,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-01-29 00:39:02,067 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-01-29 00:39:02,068 [ scc.repo] DEBUG ## Branches found: 2025-01-29 00:39:02,068 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-01-29 00:39:02,068 [ scc.git] DEBUG Get sha1 of %s 2025-01-29 00:39:02,068 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:39:02,073 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-29 00:39:02,077 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-29 00:39:02,077 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-29 00:39:02,082 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-29 00:39:02,087 [ scc.git] DEBUG Already up to date. 2025-01-29 00:39:02,087 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-01-29 00:39:02,409 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-01-29 00:39:02,409 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-01-29 00:39:02,413 [ scc.git] DEBUG ## Unique users: [] 2025-01-29 00:39:02,413 [ scc.git] DEBUG Get sha1 of %s 2025-01-29 00:39:02,413 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:39:02,417 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-01-29 00:39:02,422 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:39:02,425 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-01-29 00:39:02,528 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-01-29 00:39:02,528 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-01-29 00:39:02,528 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-01-29 00:39:02,528 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-01-29 00:39:02,529 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-01-29 00:39:02,529 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-01-29 00:39:02,529 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-01-29 00:39:02,529 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-01-29 00:39:02,529 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-01-29 00:39:02,529 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-29 00:39:02,533 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-01-29 00:39:02,533 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-01-29 00:39:02,533 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-01-29 00:39:02,535 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-01-29 00:39:02,536 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-01-29 00:39:02,536 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-01-29 00:39:02,536 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-01-29 00:39:02,536 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-01-29 00:39:02,536 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-01-29 00:39:02,536 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-01-29 00:39:02,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:39:02,662 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-29 00:39:02,701 [ scc.git] DEBUG Get sha1 of %s 2025-01-29 00:39:02,702 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:39:02,705 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-29 00:39:02,741 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-29 00:39:02,747 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5f7d1c72e0> has no local changes 2025-01-29 00:39:02,747 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#305 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/305/)' 2025-01-29 00:39:02,756 [ scc.git] DEBUG [detached HEAD b795024] merge master -Dorg -Ssuccess-only 2025-01-29 00:39:02,757 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-29 00:39:02,757 [ scc.repo] DEBUG ## PRs found: 2025-01-29 00:39:03,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-01-29 00:39:03,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-01-29 00:39:04,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-01-29 00:39:04,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-01-29 00:39:05,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-01-29 00:39:05,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:39:06,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-01-29 00:39:06,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-01-29 00:39:06,602 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-01-29 00:39:07,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-01-29 00:39:07,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-01-29 00:39:07,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-01-29 00:39:08,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-01-29 00:39:08,432 [ scc.repo] DEBUG ## Branches found: 2025-01-29 00:39:08,432 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-01-29 00:39:08,433 [ scc.git] DEBUG Get sha1 of %s 2025-01-29 00:39:08,433 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:39:08,437 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-29 00:39:08,440 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-29 00:39:08,441 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-29 00:39:08,445 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-29 00:39:08,449 [ scc.git] DEBUG Already up to date. 2025-01-29 00:39:08,449 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-01-29 00:39:08,831 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-01-29 00:39:08,832 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-01-29 00:39:08,836 [ scc.git] DEBUG ## Unique users: [] 2025-01-29 00:39:08,836 [ scc.git] DEBUG Get sha1 of %s 2025-01-29 00:39:08,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:39:08,841 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-01-29 00:39:08,846 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:39:08,850 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-01-29 00:39:08,860 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-01-29 00:39:08,861 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-29 00:39:08,864 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-01-29 00:39:08,864 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-01-29 00:39:08,864 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-01-29 00:39:08,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:39:08,992 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-29 00:39:09,033 [ scc.git] DEBUG Get sha1 of %s 2025-01-29 00:39:09,033 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:39:09,037 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-29 00:39:09,077 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-29 00:39:09,082 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5f7d1c7490> has no local changes 2025-01-29 00:39:09,083 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#305 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/305/)' 2025-01-29 00:39:09,091 [ scc.git] DEBUG [detached HEAD 14dc13b] merge master -Dorg -Ssuccess-only 2025-01-29 00:39:09,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-29 00:39:09,091 [ scc.repo] DEBUG ## PRs found: 2025-01-29 00:39:09,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-01-29 00:39:10,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None 2025-01-29 00:39:10,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None 2025-01-29 00:39:10,659 [ scc.repo] DEBUG # ... Include label: include 2025-01-29 00:39:11,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None 2025-01-29 00:39:11,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:39:12,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-29 00:39:13,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None 2025-01-29 00:39:13,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1?per_page=1 HTTP/1.1" 200 None 2025-01-29 00:39:13,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None 2025-01-29 00:39:14,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/status HTTP/1.1" 200 None 2025-01-29 00:39:14,252 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation' 2025-01-29 00:39:14,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-01-29 00:39:15,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-01-29 00:39:15,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-01-29 00:39:16,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:39:16,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-29 00:39:17,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-01-29 00:39:17,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2025-01-29 00:39:18,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-01-29 00:39:18,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2025-01-29 00:39:18,426 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-01-29 00:39:18,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-01-29 00:39:19,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-01-29 00:39:19,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-01-29 00:39:20,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:39:20,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-29 00:39:21,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-01-29 00:39:21,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-01-29 00:39:22,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:39:22,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-29 00:39:23,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-01-29 00:39:23,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None 2025-01-29 00:39:24,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-01-29 00:39:24,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None 2025-01-29 00:39:24,560 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-01-29 00:39:24,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None 2025-01-29 00:39:25,000 [ scc.repo] DEBUG # ... Exclude label: exclude 2025-01-29 00:39:25,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None 2025-01-29 00:39:25,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None 2025-01-29 00:39:26,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2025-01-29 00:39:26,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:39:27,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2025-01-29 00:39:27,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2 2025-01-29 00:39:27,721 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2025-01-29 00:39:28,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-01-29 00:39:28,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-01-29 00:39:29,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-01-29 00:39:29,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:39:30,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-29 00:39:30,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-01-29 00:39:30,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None 2025-01-29 00:39:31,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-01-29 00:39:31,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None 2025-01-29 00:39:31,885 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-01-29 00:39:32,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None 2025-01-29 00:39:32,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None 2025-01-29 00:39:33,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-01-29 00:39:33,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-01-29 00:39:34,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2025-01-29 00:39:34,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:39:35,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2025-01-29 00:39:35,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2 2025-01-29 00:39:35,645 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj' 2025-01-29 00:39:36,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None 2025-01-29 00:39:36,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2025-01-29 00:39:37,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:39:37,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2025-01-29 00:39:37,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2 2025-01-29 00:39:37,898 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2025-01-29 00:39:38,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None 2025-01-29 00:39:38,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None 2025-01-29 00:39:39,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2025-01-29 00:39:39,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:39:40,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2025-01-29 00:39:40,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2 2025-01-29 00:39:40,807 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error' 2025-01-29 00:39:41,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-01-29 00:39:41,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-01-29 00:39:42,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-01-29 00:39:42,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:39:43,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-01-29 00:39:43,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-01-29 00:39:43,507 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-01-29 00:39:43,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None 2025-01-29 00:39:44,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None 2025-01-29 00:39:44,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None 2025-01-29 00:39:45,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None 2025-01-29 00:39:45,343 [ scc.repo] DEBUG ## Branches found: 2025-01-29 00:39:45,343 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-01-29 00:39:45,344 [ scc.git] DEBUG Get sha1 of %s 2025-01-29 00:39:45,344 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:39:45,349 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-29 00:39:45,353 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-29 00:39:45,353 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-29 00:39:45,358 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-29 00:39:45,362 [ scc.git] DEBUG Already up to date. 2025-01-29 00:39:45,363 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-01-29 00:39:47,456 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-01-29 00:39:47,456 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-01-29 00:39:47,461 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head' 2025-01-29 00:39:47,779 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-01-29 00:39:47,779 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD 2025-01-29 00:39:47,783 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head' 2025-01-29 00:39:48,081 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-01-29 00:39:48,081 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD 2025-01-29 00:39:48,085 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head' 2025-01-29 00:39:48,373 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-01-29 00:39:48,373 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD 2025-01-29 00:39:48,378 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-01-29 00:39:48,834 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-01-29 00:39:48,834 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-01-29 00:39:48,839 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2025-01-29 00:39:49,134 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-01-29 00:39:49,135 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2025-01-29 00:39:49,139 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-01-29 00:39:49,447 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-01-29 00:39:49,447 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-01-29 00:39:49,453 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-01-29 00:39:49,943 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-01-29 00:39:49,944 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-01-29 00:39:49,948 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head' 2025-01-29 00:39:50,725 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-01-29 00:39:50,725 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD 2025-01-29 00:39:50,730 [ scc.git] DEBUG ## Unique users: [] 2025-01-29 00:39:50,730 [ scc.git] DEBUG Get sha1 of %s 2025-01-29 00:39:50,730 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:39:50,734 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-01-29 00:39:50,746 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:39:50,751 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-01-29 00:39:50,866 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-01-29 00:39:50,866 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-01-29 00:39:50,868 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-29 00:39:50,872 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-01-29 00:39:50,872 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-01-29 00:39:50,872 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-01-29 00:39:51,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:39:51,014 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2025-01-29 00:39:51,027 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:39:51,031 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2025-01-29 00:39:51,150 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-01-29 00:39:51,151 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py 2025-01-29 00:39:51,151 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-29 00:39:51,158 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------ 2025-01-29 00:39:51,158 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++ 2025-01-29 00:39:51,159 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-) 2025-01-29 00:39:51,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:39:51,404 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f' 2025-01-29 00:39:51,416 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:39:51,422 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f' 2025-01-29 00:39:51,614 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py 2025-01-29 00:39:51,615 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-29 00:39:51,619 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++---- 2025-01-29 00:39:51,620 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-) 2025-01-29 00:39:51,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:39:51,784 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a' 2025-01-29 00:39:51,796 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:39:51,800 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a' 2025-01-29 00:39:52,623 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py 2025-01-29 00:39:52,623 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py 2025-01-29 00:39:52,625 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-29 00:39:52,628 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++- 2025-01-29 00:39:52,628 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +- 2025-01-29 00:39:52,628 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-) 2025-01-29 00:39:52,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:39:52,762 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-01-29 00:39:52,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:39:52,777 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-01-29 00:39:52,795 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-29 00:39:52,798 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-01-29 00:39:52,798 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-01-29 00:39:52,798 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-01-29 00:39:52,798 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-01-29 00:39:52,798 [ scc.git] DEBUG create mode 100644 connect.py 2025-01-29 00:39:53,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:39:53,136 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5' 2025-01-29 00:39:53,148 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:39:53,153 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5' 2025-01-29 00:39:53,274 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py 2025-01-29 00:39:53,275 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-29 00:39:53,278 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++ 2025-01-29 00:39:53,278 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2025-01-29 00:39:53,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:39:53,520 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-01-29 00:39:53,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:39:53,536 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-01-29 00:39:53,657 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-01-29 00:39:53,658 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-29 00:39:53,662 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-01-29 00:39:53,662 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-01-29 00:39:53,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:39:53,909 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-01-29 00:39:53,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:39:53,928 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-01-29 00:39:53,983 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-01-29 00:39:53,984 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-29 00:39:53,991 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-01-29 00:39:53,991 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-01-29 00:39:54,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:39:54,294 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1' 2025-01-29 00:39:54,307 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:39:54,312 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1' 2025-01-29 00:39:54,335 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-29 00:39:54,337 [ scc.git] DEBUG .gitignore | 1 + 2025-01-29 00:39:54,337 [ scc.git] DEBUG src/omero/plugins/download.py | 17 ++++++++++++----- 2025-01-29 00:39:54,337 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 5 deletions(-) 2025-01-29 00:39:54,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:39:54,674 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-29 00:39:54,711 [ scc.git] DEBUG Get sha1 of %s 2025-01-29 00:39:54,711 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:39:54,715 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-29 00:39:54,751 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-29 00:39:54,757 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5f7c0ecc70> has no local changes 2025-01-29 00:39:54,757 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 427 Rdornier 'Add fileset folder creation' Generated by OMERO-python-superbuild-push#305 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/305/)' 2025-01-29 00:39:54,765 [ scc.git] DEBUG [detached HEAD f5a42b47] merge master -Dorg -Ssuccess-only 2025-01-29 00:39:54,766 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-29 00:39:54,766 [ scc.git] INFO Overriding base-branch from master to develop 2025-01-29 00:39:54,766 [ scc.repo] DEBUG ## PRs found: 2025-01-29 00:39:55,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-01-29 00:39:55,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-01-29 00:39:56,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-01-29 00:39:56,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-01-29 00:39:57,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:39:57,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-29 00:39:57,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-01-29 00:39:58,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-01-29 00:39:58,389 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-01-29 00:39:58,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-01-29 00:39:59,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-01-29 00:39:59,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-01-29 00:40:00,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:40:00,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-01-29 00:40:01,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-01-29 00:40:01,175 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-01-29 00:40:01,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-01-29 00:40:02,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-01-29 00:40:02,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-01-29 00:40:03,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-01-29 00:40:03,102 [ scc.repo] DEBUG ## Branches found: 2025-01-29 00:40:03,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-01-29 00:40:03,103 [ scc.git] DEBUG Get sha1 of %s 2025-01-29 00:40:03,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:40:03,108 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-01-29 00:40:03,112 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-29 00:40:03,112 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-01-29 00:40:03,116 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-01-29 00:40:03,121 [ scc.git] DEBUG Already up to date. 2025-01-29 00:40:03,121 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-01-29 00:40:04,011 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-01-29 00:40:04,011 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-01-29 00:40:04,019 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-01-29 00:40:04,743 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-01-29 00:40:04,743 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-01-29 00:40:04,748 [ scc.git] DEBUG ## Unique users: [] 2025-01-29 00:40:04,748 [ scc.git] DEBUG Get sha1 of %s 2025-01-29 00:40:04,748 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:40:04,753 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-01-29 00:40:04,760 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:40:04,765 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-01-29 00:40:05,164 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-01-29 00:40:05,164 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-29 00:40:05,164 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-29 00:40:05,172 [ scc.git] DEBUG Calling 'git reset --hard 4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-01-29 00:40:05,179 [ scc.git] DEBUG HEAD is now at 4b4c755 Bump version: 5.9.0 → 5.9.1.dev0 2025-01-29 00:40:05,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:40:05,350 [ scc.git] DEBUG Calling 'git merge-base 4b4c755af4ccf8a5e709548d1f8415fab48a4867 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-01-29 00:40:05,359 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-01-29 00:40:05,366 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#305](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/305/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/305/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-01-29 00:40:05,374 [ scc.config] DEBUG Found github.token 2025-01-29 00:40:05,374 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-01-29 00:40:05,374 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-01-29 00:40:05,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:40:05,388 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-01-29 00:40:05,399 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-29 00:40:05,402 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-01-29 00:40:05,402 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-01-29 00:40:05,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:40:05,730 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-29 00:40:05,786 [ scc.git] DEBUG Get sha1 of %s 2025-01-29 00:40:05,786 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:40:05,794 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-29 00:40:05,834 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-29 00:40:05,840 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5f7c0dce20> has no local changes 2025-01-29 00:40:05,840 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#305 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/305/)' 2025-01-29 00:40:05,850 [ scc.git] DEBUG [detached HEAD 40220e6] merge master -Dorg -Ssuccess-only 2025-01-29 00:40:05,851 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-29 00:40:05,851 [ scc.repo] DEBUG ## PRs found: 2025-01-29 00:40:06,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-01-29 00:40:06,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/605 HTTP/1.1" 200 None 2025-01-29 00:40:07,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4fc2c03f0e2f692b4fca3d2aacb0f94e13079b4a HTTP/1.1" 200 None 2025-01-29 00:40:07,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4fc2c03f0e2f692b4fca3d2aacb0f94e13079b4a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:40:08,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4fc2c03f0e2f692b4fca3d2aacb0f94e13079b4a/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-29 00:40:08,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4fc2c03f0e2f692b4fca3d2aacb0f94e13079b4a HTTP/1.1" 200 None 2025-01-29 00:40:09,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/4fc2c03f0e2f692b4fca3d2aacb0f94e13079b4a?per_page=1 HTTP/1.1" 200 None 2025-01-29 00:40:09,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4fc2c03f0e2f692b4fca3d2aacb0f94e13079b4a HTTP/1.1" 200 None 2025-01-29 00:40:10,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4fc2c03f0e2f692b4fca3d2aacb0f94e13079b4a/status HTTP/1.1" 200 None 2025-01-29 00:40:10,147 [ scc.repo] DEBUG - PR 605 sbesson 'Do not strip leading or trailing whitespaces in password fields' 2025-01-29 00:40:10,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-01-29 00:40:11,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-01-29 00:40:11,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:40:11,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-29 00:40:12,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-01-29 00:40:12,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-01-29 00:40:13,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-01-29 00:40:13,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-01-29 00:40:13,809 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-01-29 00:40:14,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/603 HTTP/1.1" 200 None 2025-01-29 00:40:14,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/603/comments HTTP/1.1" 200 None 2025-01-29 00:40:15,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/7a4f8094640205a103f4348b908b846772148b59 HTTP/1.1" 200 None 2025-01-29 00:40:15,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/7a4f8094640205a103f4348b908b846772148b59/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:40:16,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/7a4f8094640205a103f4348b908b846772148b59/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-29 00:40:16,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/7a4f8094640205a103f4348b908b846772148b59 HTTP/1.1" 200 None 2025-01-29 00:40:17,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/7a4f8094640205a103f4348b908b846772148b59?per_page=1 HTTP/1.1" 200 None 2025-01-29 00:40:17,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/7a4f8094640205a103f4348b908b846772148b59 HTTP/1.1" 200 None 2025-01-29 00:40:17,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/7a4f8094640205a103f4348b908b846772148b59/status HTTP/1.1" 200 None 2025-01-29 00:40:17,988 [ scc.repo] DEBUG - PR 603 will-moore 'Don't use group -1 for luts_png' 2025-01-29 00:40:18,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-01-29 00:40:18,434 [ scc.repo] DEBUG # ... Include label: include 2025-01-29 00:40:18,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-01-29 00:40:19,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:40:19,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-29 00:40:20,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-01-29 00:40:20,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-01-29 00:40:21,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-01-29 00:40:21,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-01-29 00:40:21,777 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all ann' 2025-01-29 00:40:22,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/600 HTTP/1.1" 200 None 2025-01-29 00:40:22,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f8a449a16e16db1d32aa2e3f703b35e26852c6e4 HTTP/1.1" 200 None 2025-01-29 00:40:23,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f8a449a16e16db1d32aa2e3f703b35e26852c6e4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:40:23,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f8a449a16e16db1d32aa2e3f703b35e26852c6e4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-29 00:40:24,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f8a449a16e16db1d32aa2e3f703b35e26852c6e4 HTTP/1.1" 200 None 2025-01-29 00:40:24,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/f8a449a16e16db1d32aa2e3f703b35e26852c6e4?per_page=1 HTTP/1.1" 200 None 2025-01-29 00:40:24,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f8a449a16e16db1d32aa2e3f703b35e26852c6e4 HTTP/1.1" 200 None 2025-01-29 00:40:25,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f8a449a16e16db1d32aa2e3f703b35e26852c6e4/status HTTP/1.1" 200 None 2025-01-29 00:40:25,409 [ scc.repo] DEBUG - PR 600 sbesson 'Remove Python 3.8 from the testing matrix' 2025-01-29 00:40:25,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/598 HTTP/1.1" 200 None 2025-01-29 00:40:26,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/598/comments HTTP/1.1" 200 None 2025-01-29 00:40:26,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6f07268f880d6159be0bb56eacb20557305152b6 HTTP/1.1" 200 None 2025-01-29 00:40:27,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6f07268f880d6159be0bb56eacb20557305152b6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:40:27,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6f07268f880d6159be0bb56eacb20557305152b6/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-29 00:40:28,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6f07268f880d6159be0bb56eacb20557305152b6 HTTP/1.1" 200 None 2025-01-29 00:40:28,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6f07268f880d6159be0bb56eacb20557305152b6?per_page=1 HTTP/1.1" 200 None 2025-01-29 00:40:29,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6f07268f880d6159be0bb56eacb20557305152b6 HTTP/1.1" 200 None 2025-01-29 00:40:29,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6f07268f880d6159be0bb56eacb20557305152b6/status HTTP/1.1" 200 None 2025-01-29 00:40:29,530 [ scc.repo] DEBUG - PR 598 will-moore 'Fix display of ContrastMethod' 2025-01-29 00:40:29,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-01-29 00:40:30,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-01-29 00:40:30,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-01-29 00:40:31,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:40:31,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-29 00:40:32,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-01-29 00:40:32,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-01-29 00:40:33,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-01-29 00:40:33,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-01-29 00:40:33,670 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-01-29 00:40:34,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-01-29 00:40:34,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-01-29 00:40:35,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-01-29 00:40:35,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:40:36,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-29 00:40:36,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-01-29 00:40:36,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-01-29 00:40:37,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-01-29 00:40:37,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-01-29 00:40:37,855 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-01-29 00:40:38,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/585 HTTP/1.1" 200 None 2025-01-29 00:40:38,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-01-29 00:40:39,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-01-29 00:40:39,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-01-29 00:40:40,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-01-29 00:40:40,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-01-29 00:40:41,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:40:41,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-29 00:40:42,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-01-29 00:40:42,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None 2025-01-29 00:40:42,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-01-29 00:40:43,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None 2025-01-29 00:40:43,366 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-01-29 00:40:43,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-01-29 00:40:44,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-01-29 00:40:44,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-01-29 00:40:45,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:40:45,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-29 00:40:46,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-01-29 00:40:46,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None 2025-01-29 00:40:47,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-01-29 00:40:47,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None 2025-01-29 00:40:47,642 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-01-29 00:40:48,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-01-29 00:40:48,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-01-29 00:40:49,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-01-29 00:40:49,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-29 00:40:50,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-29 00:40:50,002 [ scc.repo] DEBUG ## Branches found: 2025-01-29 00:40:50,002 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-01-29 00:40:50,002 [ scc.git] DEBUG Get sha1 of %s 2025-01-29 00:40:50,002 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:40:50,007 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-29 00:40:50,012 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-29 00:40:50,012 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-29 00:40:50,017 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-29 00:40:50,023 [ scc.git] DEBUG Already up to date. 2025-01-29 00:40:50,023 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-01-29 00:40:51,912 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-01-29 00:40:51,912 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-01-29 00:40:51,917 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-01-29 00:40:52,266 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-01-29 00:40:52,266 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-01-29 00:40:52,272 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-01-29 00:40:53,131 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-01-29 00:40:53,131 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-01-29 00:40:53,136 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-01-29 00:40:53,753 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-01-29 00:40:53,753 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-01-29 00:40:53,758 [ scc.git] DEBUG Calling 'git fetch origin pull/598/head' 2025-01-29 00:40:54,241 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-01-29 00:40:54,241 [ scc.git] DEBUG * branch refs/pull/598/head -> FETCH_HEAD 2025-01-29 00:40:54,255 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head' 2025-01-29 00:40:54,699 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-01-29 00:40:54,700 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD 2025-01-29 00:40:54,706 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-01-29 00:40:55,019 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-01-29 00:40:55,019 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-01-29 00:40:55,024 [ scc.git] DEBUG Calling 'git fetch origin pull/603/head' 2025-01-29 00:40:56,669 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-01-29 00:40:56,669 [ scc.git] DEBUG * branch refs/pull/603/head -> FETCH_HEAD 2025-01-29 00:40:56,672 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-01-29 00:40:57,319 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-01-29 00:40:57,319 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-01-29 00:40:57,324 [ scc.git] DEBUG Calling 'git fetch origin pull/605/head' 2025-01-29 00:40:57,743 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-01-29 00:40:57,743 [ scc.git] DEBUG * branch refs/pull/605/head -> FETCH_HEAD 2025-01-29 00:40:57,748 [ scc.git] DEBUG ## Unique users: [] 2025-01-29 00:40:57,748 [ scc.git] DEBUG Get sha1 of %s 2025-01-29 00:40:57,748 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:40:57,753 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-01-29 00:40:57,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:40:57,766 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-01-29 00:40:57,838 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-01-29 00:40:57,838 [ scc.git] DEBUG Auto-merging setup.py 2025-01-29 00:40:57,840 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-29 00:40:57,843 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-01-29 00:40:57,843 [ scc.git] DEBUG setup.py | 1 + 2025-01-29 00:40:57,843 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-01-29 00:40:58,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:40:58,001 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-01-29 00:40:58,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:40:58,015 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-01-29 00:40:58,149 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-01-29 00:40:58,149 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-01-29 00:40:58,150 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-29 00:40:58,154 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-01-29 00:40:58,154 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-01-29 00:40:58,154 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-01-29 00:40:58,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:40:58,385 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-01-29 00:40:58,394 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:40:58,399 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-01-29 00:40:58,445 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-29 00:40:58,448 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-01-29 00:40:58,448 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-01-29 00:40:58,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:40:58,768 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-01-29 00:40:58,777 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:40:58,781 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-01-29 00:40:58,832 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-29 00:40:58,836 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-01-29 00:40:58,837 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-01-29 00:40:59,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:40:59,159 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6f07268f880d6159be0bb56eacb20557305152b6' 2025-01-29 00:40:59,172 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:40:59,176 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 598 (Fix display of ContrastMethod) 6f07268f880d6159be0bb56eacb20557305152b6' 2025-01-29 00:40:59,477 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-29 00:40:59,482 [ scc.git] DEBUG omeroweb/webclient/forms.py | 2 +- 2025-01-29 00:40:59,482 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-01-29 00:40:59,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:40:59,619 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f8a449a16e16db1d32aa2e3f703b35e26852c6e4' 2025-01-29 00:40:59,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:40:59,632 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Remove Python 3.8 from the testing matrix) f8a449a16e16db1d32aa2e3f703b35e26852c6e4' 2025-01-29 00:40:59,743 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-29 00:40:59,747 [ scc.git] DEBUG .github/workflows/tox.yml | 1 - 2025-01-29 00:40:59,747 [ scc.git] DEBUG tox.ini | 3 +-- 2025-01-29 00:40:59,747 [ scc.git] DEBUG 2 files changed, 1 insertion(+), 3 deletions(-) 2025-01-29 00:40:59,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:40:59,999 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-01-29 00:41:00,008 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:41:00,013 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all ann) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-01-29 00:41:00,274 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-29 00:41:00,281 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-01-29 00:41:00,281 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-01-29 00:41:00,281 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-01-29 00:41:00,281 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-01-29 00:41:00,281 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-01-29 00:41:00,283 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-01-29 00:41:00,283 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-01-29 00:41:00,284 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-01-29 00:41:00,284 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-01-29 00:41:00,284 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-01-29 00:41:00,284 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-01-29 00:41:00,284 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-01-29 00:41:00,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:41:00,421 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7a4f8094640205a103f4348b908b846772148b59' 2025-01-29 00:41:00,431 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:41:00,436 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 603 (Don't use group -1 for luts_png) 7a4f8094640205a103f4348b908b846772148b59' 2025-01-29 00:41:00,460 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-29 00:41:00,466 [ scc.git] DEBUG README.rst | 12 +++ 2025-01-29 00:41:00,466 [ scc.git] DEBUG .../webgateway/static/webgateway/json/luts.json | 1 + 2025-01-29 00:41:00,466 [ scc.git] DEBUG omeroweb/webgateway/util.py | 39 ++++++++ 2025-01-29 00:41:00,466 [ scc.git] DEBUG omeroweb/webgateway/views.py | 105 ++++++++++----------- 2025-01-29 00:41:00,466 [ scc.git] DEBUG 4 files changed, 101 insertions(+), 56 deletions(-) 2025-01-29 00:41:00,466 [ scc.git] DEBUG create mode 100644 omeroweb/webgateway/static/webgateway/json/luts.json 2025-01-29 00:41:00,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:41:00,813 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-01-29 00:41:00,823 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:41:00,828 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-01-29 00:41:00,855 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-29 00:41:00,861 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-01-29 00:41:00,861 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-01-29 00:41:00,861 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-01-29 00:41:00,861 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-01-29 00:41:01,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:41:01,193 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4fc2c03f0e2f692b4fca3d2aacb0f94e13079b4a' 2025-01-29 00:41:01,210 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:41:01,218 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 605 (Do not strip leading or trailing whitespaces in password fields) 4fc2c03f0e2f692b4fca3d2aacb0f94e13079b4a' 2025-01-29 00:41:01,246 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-29 00:41:01,250 [ scc.git] DEBUG omeroweb/webadmin/forms.py | 4 ++++ 2025-01-29 00:41:01,250 [ scc.git] DEBUG 1 file changed, 4 insertions(+) 2025-01-29 00:41:01,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:41:01,579 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-29 00:41:01,626 [ scc.git] DEBUG Get sha1 of %s 2025-01-29 00:41:01,627 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-29 00:41:01,631 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-29 00:41:01,677 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-29 00:41:01,687 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5f7c0d6670> has no local changes 2025-01-29 00:41:01,687 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 598 will-moore 'Fix display of ContrastMethod' - PR 600 sbesson 'Remove Python 3.8 from the testing matrix' - PR 602 Tom-TBT 'Inherit all ann' - PR 603 will-moore 'Don't use group -1 for luts_png' - PR 604 will-moore 'Right panel perf' - PR 605 sbesson 'Do not strip leading or trailing whitespaces in password fields' Generated by OMERO-python-superbuild-push#305 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/305/)' 2025-01-29 00:41:01,699 [ scc.git] DEBUG [detached HEAD b53091991] merge master -Dorg -Ssuccess-only 2025-01-29 00:41:01,700 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-29 00:41:01,700 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-29 00:41:01,755 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-01-29 00:41:01,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:41:01,980 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-01-29 00:41:02,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:41:02,367 [ scc.config] DEBUG Found submodule.omero-py.url 2025-01-29 00:41:02,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:41:02,752 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-01-29 00:41:03,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:41:03,163 [ scc.config] DEBUG Found submodule.omero-web.url 2025-01-29 00:41:03,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-29 00:41:03,547 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-29 00:41:03,577 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5f7d1ba370> has local changes 2025-01-29 00:41:03,578 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 427 Rdornier 'Add fileset folder creation' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 598 will-moore 'Fix display of ContrastMethod' - PR 600 sbesson 'Remove Python 3.8 from the testing matrix' - PR 602 Tom-TBT 'Inherit all ann' - PR 603 will-moore 'Don't use group -1 for luts_png' - PR 604 will-moore 'Right panel perf' - PR 605 sbesson 'Do not strip leading or trailing whitespaces in password fields' Generated by OMERO-python-superbuild-push#305 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/305/)' 2025-01-29 00:41:03,587 [ scc.git] DEBUG [detached HEAD d556875] merge master -Dorg -Ssuccess-only 2025-01-29 00:41:03,587 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-01-29 00:41:03,587 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-01-29 00:41:03,588 [ scc.merge] INFO Already up to date. 2025-01-29 00:41:03,588 [ scc.merge] INFO 2025-01-29 00:41:03,588 [ scc.merge] INFO 2025-01-29 00:41:03,588 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-01-29 00:41:03,588 [ scc.merge] INFO Already up to date. 2025-01-29 00:41:03,588 [ scc.merge] INFO 2025-01-29 00:41:03,588 [ scc.merge] INFO Merged PRs: 2025-01-29 00:41:03,588 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-01-29 00:41:03,588 [ scc.merge] INFO 2025-01-29 00:41:03,588 [ scc.merge] INFO Repository: ome/omero-marshal 2025-01-29 00:41:03,588 [ scc.merge] INFO Excluded PRs: 2025-01-29 00:41:03,588 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-01-29 00:41:03,588 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-01-29 00:41:03,588 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-01-29 00:41:03,588 [ scc.merge] INFO Already up to date. 2025-01-29 00:41:03,588 [ scc.merge] INFO 2025-01-29 00:41:03,588 [ scc.merge] INFO Merged PRs: 2025-01-29 00:41:03,588 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-01-29 00:41:03,588 [ scc.merge] INFO 2025-01-29 00:41:03,588 [ scc.merge] INFO Repository: ome/omero-py 2025-01-29 00:41:03,588 [ scc.merge] INFO Excluded PRs: 2025-01-29 00:41:03,588 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-01-29 00:41:03,588 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude) 2025-01-29 00:41:03,588 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) 2025-01-29 00:41:03,588 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) 2025-01-29 00:41:03,588 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) 2025-01-29 00:41:03,588 [ scc.merge] INFO Already up to date. 2025-01-29 00:41:03,588 [ scc.merge] INFO 2025-01-29 00:41:03,588 [ scc.merge] INFO Merged PRs: 2025-01-29 00:41:03,588 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-01-29 00:41:03,589 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error' 2025-01-29 00:41:03,589 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2025-01-29 00:41:03,589 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' 2025-01-29 00:41:03,589 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-01-29 00:41:03,589 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2025-01-29 00:41:03,589 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-01-29 00:41:03,589 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-01-29 00:41:03,589 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation' 2025-01-29 00:41:03,589 [ scc.merge] INFO 2025-01-29 00:41:03,589 [ scc.merge] INFO Repository: ome/omero-scripts 2025-01-29 00:41:03,589 [ scc.merge] INFO Excluded PRs: 2025-01-29 00:41:03,589 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-01-29 00:41:03,589 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-01-29 00:41:03,589 [ scc.merge] INFO Already up to date. 2025-01-29 00:41:03,589 [ scc.merge] INFO 2025-01-29 00:41:03,589 [ scc.merge] INFO Merged PRs: 2025-01-29 00:41:03,589 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-01-29 00:41:03,589 [ scc.merge] INFO 2025-01-29 00:41:03,589 [ scc.merge] INFO Conflicting PRs (not included): 2025-01-29 00:41:03,589 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-01-29 00:41:03,589 [ scc.merge] INFO 2025-01-29 00:41:03,589 [ scc.merge] INFO Repository: ome/omero-web 2025-01-29 00:41:03,589 [ scc.merge] INFO Excluded PRs: 2025-01-29 00:41:03,589 [ scc.merge] INFO - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-01-29 00:41:03,589 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-01-29 00:41:03,589 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2025-01-29 00:41:03,589 [ scc.merge] INFO Already up to date. 2025-01-29 00:41:03,589 [ scc.merge] INFO 2025-01-29 00:41:03,589 [ scc.merge] INFO Merged PRs: 2025-01-29 00:41:03,589 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-01-29 00:41:03,589 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-01-29 00:41:03,589 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-01-29 00:41:03,589 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-01-29 00:41:03,589 [ scc.merge] INFO - PR 598 will-moore 'Fix display of ContrastMethod' 2025-01-29 00:41:03,589 [ scc.merge] INFO - PR 600 sbesson 'Remove Python 3.8 from the testing matrix' 2025-01-29 00:41:03,589 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all ann' 2025-01-29 00:41:03,590 [ scc.merge] INFO - PR 603 will-moore 'Don't use group -1 for luts_png' 2025-01-29 00:41:03,590 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-01-29 00:41:03,590 [ scc.merge] INFO - PR 605 sbesson 'Do not strip leading or trailing whitespaces in password fields' 2025-01-29 00:41:03,590 [ scc.merge] INFO 2025-01-29 00:41:03,590 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-01-29 00:41:03,590 [ scc.git] DEBUG Calling 'git remote' 2025-01-29 00:41:03,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-01-29 00:41:03,595 [ scc.git] DEBUG Calling 'git remote' 2025-01-29 00:41:03,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-29 00:41:03,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-01-29 00:41:03,599 [ scc.git] DEBUG Calling 'git remote' 2025-01-29 00:41:03,604 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-29 00:41:03,604 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-01-29 00:41:03,604 [ scc.git] DEBUG Calling 'git remote' 2025-01-29 00:41:03,608 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-29 00:41:03,609 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-01-29 00:41:03,609 [ scc.git] DEBUG Calling 'git remote' 2025-01-29 00:41:03,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-01-29 00:41:03,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-01-29 00:41:03,613 [ scc.git] DEBUG Calling 'git remote' 2025-01-29 00:41:03,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 504: Gateway Time-out Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 504: Gateway Time-out grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 6d44f66 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 05d52412 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 96d113830 nothing to commit, working tree clean HEAD detached from d392493 nothing to commit, working tree clean 2025-01-29 00:43:32,242 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS