![[Jenkins]](/jenkins/static/9bac06d9/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 450 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 155f8de84051621b91200b6b3617c057b622fad4 (refs/remotes/origin/master) Commit message: "Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 155f8de84051621b91200b6b3617c057b622fad4 # timeout=10 > git rev-list --no-walk 1ac5a0cfa9f16361af1cce69d268027821a07127 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 406 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.0.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.0.1 WARNING: There was an error checking the latest version of pip. + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.6.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.10-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.13.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.2-cp39-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.1.31-py3-none-any.whl.metadata (2.5 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.6.1-py3-none-any.whl (410 kB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.10-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached typing_extensions-4.13.2-py3-none-any.whl (45 kB) Using cached Deprecated-1.2.18-py2.py3-none-any.whl (10.0 kB) Using cached certifi-2025.1.31-py3-none-any.whl (166 kB) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB) Using cached charset_normalizer-3.4.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (143 kB) Using cached cryptography-44.0.2-cp39-abi3-manylinux_2_34_x86_64.whl (4.2 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (83 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.18 PyGithub-2.6.1 PyYAML-6.0.2 certifi-2025.1.31 cffi-1.17.1 charset-normalizer-3.4.1 cryptography-44.0.2 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.10 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.13.2 urllib3-1.26.20 wrapt-1.17.2 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-04-24 00:52:49,526 [ scc.config] DEBUG Found github.token 2025-04-24 00:52:49,527 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:52:49,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:52:49,995 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:52:50,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:52:50,410 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:52:50,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-04-24 00:52:50,560 [ scc.gh] DEBUG 4374 remaining from 5000 (Reset at 00:04 2025-04-24 00:52:50,561 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-24 00:52:50,563 [ scc.git] DEBUG Check current status 2025-04-24 00:52:50,563 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-24 00:52:50,565 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-04-24 00:52:50,566 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-24 00:52:50,606 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-04-24 00:52:50,609 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-04-24 00:52:50,618 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-04-24 00:52:50,623 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-04-24 00:52:50,627 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-04-24 00:52:50,630 [ scc.config] DEBUG Found remote.origin.url 2025-04-24 00:52:50,811 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:52:51,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-04-24 00:52:51,352 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:52:51,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-24 00:52:51,848 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:52:52,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-24 00:52:52,267 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:52:52,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-24 00:52:52,700 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:52:52,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-24 00:52:52,877 [ scc.git] DEBUG Resetting... 2025-04-24 00:52:52,877 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-04-24 00:52:52,882 [ scc.git] DEBUG HEAD is now at 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-04-24 00:52:52,882 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-04-24 00:52:52,937 [ scc.git] DEBUG Check current status 2025-04-24 00:52:52,937 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-24 00:52:52,939 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-04-24 00:52:52,940 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-24 00:52:52,978 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-04-24 00:52:52,982 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-04-24 00:52:52,990 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-04-24 00:52:52,995 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-04-24 00:52:52,999 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-04-24 00:52:53,000 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-04-24 00:52:53,000 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-04-24 00:52:53,000 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-04-24 00:52:53,000 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-04-24 00:52:53,000 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-04-24 00:52:53,000 [ scc.repo] DEBUG ## PRs found: 2025-04-24 00:52:53,128 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:52:53,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-04-24 00:52:53,340 [ scc.repo] DEBUG ## Branches found: 2025-04-24 00:52:53,340 [ scc.git] DEBUG Get sha1 of %s 2025-04-24 00:52:53,340 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:52:53,342 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-24 00:52:53,344 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-24 00:52:53,344 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-24 00:52:53,348 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-24 00:52:53,350 [ scc.git] DEBUG Already up to date. 2025-04-24 00:52:53,350 [ scc.git] DEBUG ## Unique users: [] 2025-04-24 00:52:53,350 [ scc.git] DEBUG Get sha1 of %s 2025-04-24 00:52:53,350 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:52:53,352 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-24 00:52:53,393 [ scc.git] DEBUG Get sha1 of %s 2025-04-24 00:52:53,393 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:52:53,395 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-24 00:52:53,429 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa4aa02fb90> has no local changes 2025-04-24 00:52:53,430 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#386 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/386/)' 2025-04-24 00:52:53,454 [ scc.git] DEBUG [detached HEAD 315a13c] merge master -Dorg -Snone 2025-04-24 00:52:53,454 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-04-24 00:52:53,454 [ scc.merge] INFO Already up to date. 2025-04-24 00:52:53,455 [ scc.merge] INFO 2025-04-24 00:52:53,455 [ scc.merge] INFO 2025-04-24 00:52:53,455 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-04-24 00:52:53,455 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-04-24 00:52:55,368 [ scc.config] DEBUG Found github.token 2025-04-24 00:52:55,369 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:52:55,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:52:55,788 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:52:55,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:52:56,210 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:52:56,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-04-24 00:52:56,377 [ scc.gh] DEBUG 4366 remaining from 5000 (Reset at 00:04 2025-04-24 00:52:56,377 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-24 00:52:56,380 [ scc.git] DEBUG Check current status 2025-04-24 00:52:56,380 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-24 00:52:56,382 [ scc.git] DEBUG 315a13c merge master -Dorg -Snone 2025-04-24 00:52:56,383 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-24 00:52:56,424 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-04-24 00:52:56,427 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-04-24 00:52:56,436 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-04-24 00:52:56,441 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-04-24 00:52:56,445 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-04-24 00:52:56,448 [ scc.config] DEBUG Found remote.origin.url 2025-04-24 00:52:56,448 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-04-24 00:52:56,449 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-04-24 00:52:56,628 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:52:56,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-04-24 00:52:57,152 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:52:57,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-24 00:52:57,633 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:52:57,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-24 00:52:58,061 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:52:58,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-24 00:52:58,488 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:52:58,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-24 00:52:58,668 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-24 00:52:58,714 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-04-24 00:52:58,714 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-24 00:52:58,716 [ scc.git] DEBUG Check current status 2025-04-24 00:52:58,716 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-24 00:52:58,719 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-04-24 00:52:58,719 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-24 00:52:58,759 [ scc.config] DEBUG Found remote.origin.url 2025-04-24 00:52:58,918 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:52:59,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-04-24 00:52:59,453 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:52:59,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-24 00:52:59,933 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:00,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-24 00:53:00,360 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:00,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-24 00:53:00,806 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:00,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-24 00:53:00,977 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-24 00:53:01,016 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-24 00:53:01,017 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-04-24 00:53:01,017 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-24 00:53:01,019 [ scc.git] DEBUG Check current status 2025-04-24 00:53:01,019 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-24 00:53:01,021 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build 2025-04-24 00:53:01,022 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-24 00:53:01,061 [ scc.config] DEBUG Found remote.origin.url 2025-04-24 00:53:01,227 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:01,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-04-24 00:53:01,721 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:02,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-24 00:53:02,325 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:02,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-24 00:53:02,790 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:02,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-24 00:53:03,230 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:03,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-24 00:53:03,432 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-24 00:53:03,470 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-24 00:53:03,471 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-04-24 00:53:03,471 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-24 00:53:03,473 [ scc.git] DEBUG Check current status 2025-04-24 00:53:03,473 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-24 00:53:03,476 [ scc.git] DEBUG e485be49 Merge pull request #427 from Rdornier/mirror-java-download 2025-04-24 00:53:03,476 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-24 00:53:03,516 [ scc.config] DEBUG Found remote.origin.url 2025-04-24 00:53:03,683 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:03,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-04-24 00:53:04,224 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:04,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-24 00:53:04,702 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:04,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-24 00:53:05,149 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:05,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-24 00:53:05,592 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:05,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-24 00:53:05,817 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-24 00:53:05,856 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-24 00:53:05,857 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-04-24 00:53:05,857 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-24 00:53:05,859 [ scc.git] DEBUG Check current status 2025-04-24 00:53:05,859 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-24 00:53:05,862 [ scc.git] DEBUG 950b28b Merge pull request #225 from will-moore/test_fixes 2025-04-24 00:53:05,862 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-24 00:53:05,901 [ scc.config] DEBUG Found remote.origin.url 2025-04-24 00:53:05,901 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-04-24 00:53:06,068 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:06,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-04-24 00:53:06,590 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:06,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-24 00:53:07,067 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:07,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-24 00:53:07,505 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:07,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-24 00:53:07,942 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:08,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-24 00:53:08,131 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-24 00:53:08,170 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-24 00:53:08,171 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-04-24 00:53:08,171 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-24 00:53:08,173 [ scc.git] DEBUG Check current status 2025-04-24 00:53:08,173 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-24 00:53:08,176 [ scc.git] DEBUG 4b979f847 Bump version: 5.29.0 → 5.29.1.dev0 2025-04-24 00:53:08,176 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-24 00:53:08,215 [ scc.config] DEBUG Found remote.origin.url 2025-04-24 00:53:08,381 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:08,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-04-24 00:53:08,882 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:09,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-24 00:53:09,358 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:09,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-24 00:53:09,826 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:10,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-24 00:53:10,385 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:10,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-24 00:53:10,567 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-24 00:53:10,607 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-24 00:53:10,607 [ scc.git] DEBUG Resetting... 2025-04-24 00:53:10,607 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-04-24 00:53:10,611 [ scc.git] DEBUG HEAD is now at 315a13c merge master -Dorg -Snone 2025-04-24 00:53:10,611 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-04-24 00:53:10,663 [ scc.git] DEBUG Check current status 2025-04-24 00:53:10,664 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-24 00:53:10,666 [ scc.git] DEBUG 315a13c merge master -Dorg -Snone 2025-04-24 00:53:10,666 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-24 00:53:10,705 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-04-24 00:53:10,708 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-04-24 00:53:10,717 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-04-24 00:53:10,721 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-04-24 00:53:10,726 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-04-24 00:53:10,727 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-04-24 00:53:10,727 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-04-24 00:53:10,727 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-04-24 00:53:10,727 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-04-24 00:53:10,727 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-04-24 00:53:10,727 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-04-24 00:53:10,727 [ scc.repo] DEBUG ## PRs found: 2025-04-24 00:53:10,818 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:11,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-04-24 00:53:11,001 [ scc.repo] DEBUG ## Branches found: 2025-04-24 00:53:11,001 [ scc.git] DEBUG Get sha1 of %s 2025-04-24 00:53:11,001 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:53:11,003 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-24 00:53:11,005 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-24 00:53:11,005 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-24 00:53:11,007 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-24 00:53:11,010 [ scc.git] DEBUG Already up to date. 2025-04-24 00:53:11,010 [ scc.git] DEBUG ## Unique users: [] 2025-04-24 00:53:11,010 [ scc.git] DEBUG Get sha1 of %s 2025-04-24 00:53:11,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:53:11,012 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-24 00:53:11,052 [ scc.git] DEBUG Get sha1 of %s 2025-04-24 00:53:11,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:53:11,055 [ scc.repo] DEBUG ## PRs found: 2025-04-24 00:53:11,252 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:11,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-04-24 00:53:11,792 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:12,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-04-24 00:53:12,417 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:12,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-04-24 00:53:12,932 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:13,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-04-24 00:53:13,494 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:13,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-24 00:53:13,967 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:14,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-04-24 00:53:14,427 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:14,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-04-24 00:53:14,608 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-04-24 00:53:14,608 [ scc.repo] DEBUG ## Branches found: 2025-04-24 00:53:14,609 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-04-24 00:53:14,609 [ scc.git] DEBUG Get sha1 of %s 2025-04-24 00:53:14,609 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:53:14,611 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-24 00:53:14,613 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-24 00:53:14,613 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-24 00:53:14,616 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-24 00:53:14,620 [ scc.git] DEBUG Already up to date. 2025-04-24 00:53:14,620 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-04-24 00:53:14,905 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-04-24 00:53:14,905 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-04-24 00:53:14,909 [ scc.git] DEBUG ## Unique users: [] 2025-04-24 00:53:14,909 [ scc.git] DEBUG Get sha1 of %s 2025-04-24 00:53:14,909 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:53:14,911 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-04-24 00:53:14,914 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:53:14,916 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-04-24 00:53:14,930 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-04-24 00:53:14,930 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-04-24 00:53:14,930 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-04-24 00:53:14,930 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-04-24 00:53:14,930 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-04-24 00:53:14,930 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-04-24 00:53:14,930 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-04-24 00:53:14,930 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-04-24 00:53:14,930 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-04-24 00:53:14,931 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-24 00:53:14,935 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-04-24 00:53:14,935 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-04-24 00:53:14,935 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-04-24 00:53:14,935 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-04-24 00:53:14,935 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-04-24 00:53:14,935 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-04-24 00:53:14,935 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-04-24 00:53:14,935 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-04-24 00:53:14,935 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-04-24 00:53:14,935 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-04-24 00:53:14,936 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:15,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:53:15,100 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-24 00:53:15,139 [ scc.git] DEBUG Get sha1 of %s 2025-04-24 00:53:15,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:53:15,141 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-24 00:53:15,177 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-24 00:53:15,181 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f650ba045d0> has no local changes 2025-04-24 00:53:15,181 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#386 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/386/)' 2025-04-24 00:53:15,188 [ scc.git] DEBUG [detached HEAD 13b5163] merge master -Dorg -Ssuccess-only 2025-04-24 00:53:15,188 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-24 00:53:15,188 [ scc.repo] DEBUG ## PRs found: 2025-04-24 00:53:15,351 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:15,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-04-24 00:53:15,947 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:16,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-04-24 00:53:16,414 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:16,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2025-04-24 00:53:16,920 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:17,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-04-24 00:53:17,404 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:17,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-04-24 00:53:17,875 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:18,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-04-24 00:53:18,401 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:18,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-24 00:53:18,878 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:19,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-04-24 00:53:19,319 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:19,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-04-24 00:53:19,498 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-04-24 00:53:19,749 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:19,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-04-24 00:53:20,249 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:20,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-04-24 00:53:20,746 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:21,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-04-24 00:53:21,251 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:21,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-04-24 00:53:21,452 [ scc.repo] DEBUG ## Branches found: 2025-04-24 00:53:21,452 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-04-24 00:53:21,452 [ scc.git] DEBUG Get sha1 of %s 2025-04-24 00:53:21,452 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:53:21,454 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-24 00:53:21,457 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-24 00:53:21,457 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-24 00:53:21,460 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-24 00:53:21,463 [ scc.git] DEBUG Already up to date. 2025-04-24 00:53:21,463 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-04-24 00:53:21,762 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-04-24 00:53:21,762 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-04-24 00:53:21,766 [ scc.git] DEBUG ## Unique users: [] 2025-04-24 00:53:21,766 [ scc.git] DEBUG Get sha1 of %s 2025-04-24 00:53:21,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:53:21,768 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-04-24 00:53:21,772 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:53:21,774 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-04-24 00:53:21,784 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-04-24 00:53:21,785 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-24 00:53:21,788 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-04-24 00:53:21,788 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-04-24 00:53:21,788 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-04-24 00:53:21,789 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:21,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:53:21,962 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-24 00:53:22,001 [ scc.git] DEBUG Get sha1 of %s 2025-04-24 00:53:22,001 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:53:22,003 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-24 00:53:22,040 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-24 00:53:22,044 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f650b777610> has no local changes 2025-04-24 00:53:22,044 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#386 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/386/)' 2025-04-24 00:53:22,051 [ scc.git] DEBUG [detached HEAD 083a3d4] merge master -Dorg -Ssuccess-only 2025-04-24 00:53:22,051 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-24 00:53:22,051 [ scc.repo] DEBUG ## PRs found: 2025-04-24 00:53:22,213 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:22,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-04-24 00:53:22,824 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:23,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/453 HTTP/1.1" 200 None 2025-04-24 00:53:23,317 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:23,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/453/comments HTTP/1.1" 200 None 2025-04-24 00:53:23,852 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:24,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-04-24 00:53:24,438 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:24,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-24 00:53:24,931 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:25,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-24 00:53:25,645 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:25,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-04-24 00:53:26,200 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:26,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ff9ad445b6af7725ab17a39185630b8919e42bab?per_page=1 HTTP/1.1" 200 None 2025-04-24 00:53:26,644 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:26,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-04-24 00:53:27,093 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:27,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/status HTTP/1.1" 200 None 2025-04-24 00:53:27,285 [ scc.repo] DEBUG - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' 2025-04-24 00:53:27,536 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:27,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None 2025-04-24 00:53:28,047 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:28,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None 2025-04-24 00:53:28,567 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:28,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None 2025-04-24 00:53:28,861 [ scc.repo] DEBUG # ... Exclude label: exclude 2025-04-24 00:53:29,112 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:29,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-04-24 00:53:29,605 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:29,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-04-24 00:53:30,083 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:30,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-04-24 00:53:30,623 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:30,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-24 00:53:31,136 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:31,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-24 00:53:31,626 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:31,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-04-24 00:53:32,183 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:32,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2025-04-24 00:53:32,620 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:32,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-04-24 00:53:33,161 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:33,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2025-04-24 00:53:33,356 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-04-24 00:53:33,607 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:33,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-04-24 00:53:34,093 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:34,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET 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api.github.com:443 2025-04-24 00:53:36,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-04-24 00:53:36,642 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:36,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2025-04-24 00:53:37,117 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:37,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-04-24 00:53:37,660 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:37,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-24 00:53:38,134 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:38,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-04-24 00:53:38,678 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:38,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2025-04-24 00:53:38,862 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-04-24 00:53:39,113 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:39,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-04-24 00:53:39,602 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:39,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-04-24 00:53:40,128 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:40,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-04-24 00:53:40,646 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:40,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-24 00:53:41,099 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:41,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-04-24 00:53:41,649 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:41,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2 2025-04-24 00:53:41,835 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-04-24 00:53:42,086 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:42,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-04-24 00:53:42,564 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:42,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-04-24 00:53:43,081 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:43,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-04-24 00:53:43,551 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:43,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-04-24 00:53:44,078 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:44,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-04-24 00:53:44,601 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:44,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-24 00:53:45,123 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:45,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-04-24 00:53:45,654 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:45,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-04-24 00:53:45,832 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-04-24 00:53:45,833 [ scc.repo] DEBUG ## Branches found: 2025-04-24 00:53:45,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-04-24 00:53:45,833 [ scc.git] DEBUG Get sha1 of %s 2025-04-24 00:53:45,833 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:53:45,836 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-24 00:53:45,838 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-24 00:53:45,838 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-24 00:53:45,842 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-24 00:53:45,845 [ scc.git] DEBUG Already up to date. 2025-04-24 00:53:45,845 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-04-24 00:53:46,133 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-24 00:53:46,133 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-04-24 00:53:46,138 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-04-24 00:53:46,422 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-24 00:53:46,422 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-04-24 00:53:46,426 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-04-24 00:53:46,708 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-24 00:53:46,708 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-04-24 00:53:46,713 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-04-24 00:53:47,004 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-24 00:53:47,004 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-04-24 00:53:47,008 [ scc.git] DEBUG Calling 'git fetch origin pull/453/head' 2025-04-24 00:53:47,266 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-24 00:53:47,266 [ scc.git] DEBUG * branch refs/pull/453/head -> FETCH_HEAD 2025-04-24 00:53:47,271 [ scc.git] DEBUG ## Unique users: [] 2025-04-24 00:53:47,271 [ scc.git] DEBUG Get sha1 of %s 2025-04-24 00:53:47,271 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:53:47,273 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-04-24 00:53:47,286 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:53:47,288 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-04-24 00:53:47,310 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-04-24 00:53:47,310 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-04-24 00:53:47,311 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-24 00:53:47,315 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-04-24 00:53:47,315 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-04-24 00:53:47,315 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-04-24 00:53:47,317 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:47,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:53:47,477 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-04-24 00:53:47,490 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:53:47,492 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-04-24 00:53:47,512 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-24 00:53:47,514 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-04-24 00:53:47,515 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-04-24 00:53:47,515 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-04-24 00:53:47,515 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-04-24 00:53:47,515 [ scc.git] DEBUG create mode 100644 connect.py 2025-04-24 00:53:47,728 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:47,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:53:47,889 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-04-24 00:53:47,901 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:53:47,903 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-04-24 00:53:47,925 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-04-24 00:53:47,926 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-24 00:53:47,930 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-04-24 00:53:47,930 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-04-24 00:53:48,140 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:48,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:53:48,306 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-04-24 00:53:48,318 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:53:48,320 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-04-24 00:53:48,354 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-04-24 00:53:48,355 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-24 00:53:48,362 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-04-24 00:53:48,362 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-04-24 00:53:48,556 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:48,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:53:48,726 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ff9ad445b6af7725ab17a39185630b8919e42bab' 2025-04-24 00:53:48,738 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:53:48,740 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 453 (getObject() and getExternalInfo() load externalInfo) ff9ad445b6af7725ab17a39185630b8919e42bab' 2025-04-24 00:53:48,775 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-04-24 00:53:48,776 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-24 00:53:48,784 [ scc.git] DEBUG src/omero/gateway/__init__.py | 21 ++++++++++++++++++ 2025-04-24 00:53:48,784 [ scc.git] DEBUG src/omero/plugins/obj.py | 50 ++++++++++++++++++++++++++++++++++++++++++- 2025-04-24 00:53:48,784 [ scc.git] DEBUG 2 files changed, 70 insertions(+), 1 deletion(-) 2025-04-24 00:53:48,977 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:49,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:53:49,165 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-24 00:53:49,204 [ scc.git] DEBUG Get sha1 of %s 2025-04-24 00:53:49,204 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:53:49,206 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-24 00:53:49,244 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-24 00:53:49,251 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f650b772650> has no local changes 2025-04-24 00:53:49,251 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' Generated by OMERO-python-superbuild-push#386 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/386/)' 2025-04-24 00:53:49,259 [ scc.git] DEBUG [detached HEAD c31d7372] merge master -Dorg -Ssuccess-only 2025-04-24 00:53:49,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-24 00:53:49,259 [ scc.git] INFO Overriding base-branch from master to develop 2025-04-24 00:53:49,259 [ scc.repo] DEBUG ## PRs found: 2025-04-24 00:53:49,416 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:49,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-04-24 00:53:49,977 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:50,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-04-24 00:53:50,452 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:50,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-04-24 00:53:50,913 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:51,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-04-24 00:53:51,456 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:51,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-24 00:53:51,964 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:52,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-24 00:53:52,459 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:52,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-04-24 00:53:53,009 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:53,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-04-24 00:53:53,196 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-04-24 00:53:53,448 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:53,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-04-24 00:53:53,937 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:54,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-04-24 00:53:54,413 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:54,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-04-24 00:53:54,926 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:55,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-24 00:53:55,408 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:55,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-04-24 00:53:55,954 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:56,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-04-24 00:53:56,148 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-04-24 00:53:56,399 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:56,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-04-24 00:53:56,890 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:57,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-04-24 00:53:57,433 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:57,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-04-24 00:53:57,918 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:58,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-04-24 00:53:58,242 [ scc.repo] DEBUG ## Branches found: 2025-04-24 00:53:58,242 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-04-24 00:53:58,242 [ scc.git] DEBUG Get sha1 of %s 2025-04-24 00:53:58,242 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:53:58,245 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-04-24 00:53:58,247 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-24 00:53:58,247 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-04-24 00:53:58,250 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-04-24 00:53:58,254 [ scc.git] DEBUG Already up to date. 2025-04-24 00:53:58,254 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-04-24 00:53:58,557 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-04-24 00:53:58,557 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-04-24 00:53:58,561 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-04-24 00:53:58,833 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-04-24 00:53:58,833 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-04-24 00:53:58,837 [ scc.git] DEBUG ## Unique users: [] 2025-04-24 00:53:58,837 [ scc.git] DEBUG Get sha1 of %s 2025-04-24 00:53:58,837 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:53:58,839 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-04-24 00:53:58,845 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:53:58,847 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-04-24 00:53:58,856 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-04-24 00:53:58,857 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-04-24 00:53:58,857 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-04-24 00:53:58,860 [ scc.git] DEBUG Calling 'git reset --hard 950b28b31e228ae7b317cbd159235faf4023e4dc' 2025-04-24 00:53:58,864 [ scc.git] DEBUG HEAD is now at 950b28b Merge pull request #225 from will-moore/test_fixes 2025-04-24 00:53:58,866 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:59,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:53:59,023 [ scc.git] DEBUG Calling 'git merge-base 950b28b31e228ae7b317cbd159235faf4023e4dc 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-04-24 00:53:59,028 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..950b28b31e228ae7b317cbd159235faf4023e4dc' 2025-04-24 00:53:59,032 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#386](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/386/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/386/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-04-24 00:53:59,034 [ scc.config] DEBUG Found github.token 2025-04-24 00:53:59,034 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-04-24 00:53:59,034 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-04-24 00:53:59,039 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:53:59,041 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-04-24 00:53:59,050 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-24 00:53:59,053 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-04-24 00:53:59,053 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-04-24 00:53:59,274 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:53:59,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:53:59,447 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-24 00:53:59,486 [ scc.git] DEBUG Get sha1 of %s 2025-04-24 00:53:59,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:53:59,488 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-24 00:53:59,525 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-24 00:53:59,529 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f650b7e19d0> has no local changes 2025-04-24 00:53:59,529 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#386 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/386/)' 2025-04-24 00:53:59,535 [ scc.git] DEBUG [detached HEAD 22dff8c] merge master -Dorg -Ssuccess-only 2025-04-24 00:53:59,536 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-24 00:53:59,536 [ scc.repo] DEBUG ## PRs found: 2025-04-24 00:53:59,698 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:00,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-04-24 00:54:00,406 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:00,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/617 HTTP/1.1" 200 None 2025-04-24 00:54:00,921 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:01,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/616 HTTP/1.1" 200 None 2025-04-24 00:54:01,429 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:01,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-04-24 00:54:01,933 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:02,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-24 00:54:02,484 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:02,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-24 00:54:03,019 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:03,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-04-24 00:54:03,475 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:03,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/c6401a8d78f907d300ef6a6bb673efa86374ecc4?per_page=1 HTTP/1.1" 200 None 2025-04-24 00:54:03,914 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:04,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-04-24 00:54:04,423 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:04,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/status HTTP/1.1" 200 None 2025-04-24 00:54:04,611 [ scc.repo] DEBUG - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-04-24 00:54:04,861 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:05,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614 HTTP/1.1" 200 None 2025-04-24 00:54:05,359 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:05,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614/comments HTTP/1.1" 200 None 2025-04-24 00:54:05,815 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:06,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-04-24 00:54:06,340 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:06,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-24 00:54:06,822 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:07,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-24 00:54:07,330 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:07,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-04-24 00:54:07,872 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:08,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/da14d11b161eb8aa90a6e4729758ea504d5914e3?per_page=1 HTTP/1.1" 200 None 2025-04-24 00:54:08,316 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:08,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-04-24 00:54:08,838 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:09,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/status HTTP/1.1" 200 None 2025-04-24 00:54:09,041 [ scc.repo] DEBUG - PR 614 sbesson 'CodeQL workflow updates' 2025-04-24 00:54:09,292 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:09,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None 2025-04-24 00:54:09,761 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:10,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None 2025-04-24 00:54:10,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:10,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-04-24 00:54:10,802 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:11,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-24 00:54:11,319 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:11,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-24 00:54:11,805 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:12,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-04-24 00:54:12,373 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:12,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/a8c190ba1c823672143ab90d77020d652e2c084d?per_page=1 HTTP/1.1" 200 None 2025-04-24 00:54:12,828 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:13,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-04-24 00:54:13,354 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:13,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/status HTTP/1.1" 200 None 2025-04-24 00:54:13,560 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display' 2025-04-24 00:54:13,810 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:14,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None 2025-04-24 00:54:14,328 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:14,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None 2025-04-24 00:54:14,806 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:15,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-04-24 00:54:15,354 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:15,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-24 00:54:15,872 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:16,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-24 00:54:16,358 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:16,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-04-24 00:54:16,879 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:17,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None 2025-04-24 00:54:17,317 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:17,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-04-24 00:54:17,787 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:17,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None 2025-04-24 00:54:17,985 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-04-24 00:54:18,236 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:18,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/606 HTTP/1.1" 200 None 2025-04-24 00:54:18,725 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:18,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None 2025-04-24 00:54:19,246 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:19,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-24 00:54:19,747 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:20,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-24 00:54:20,281 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:20,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None 2025-04-24 00:54:20,729 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:20,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b360c3125f9471bf4001447f35c732507c2f2022?per_page=1 HTTP/1.1" 200 None 2025-04-24 00:54:21,178 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:21,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None 2025-04-24 00:54:21,708 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:21,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/status HTTP/1.1" 200 None 2025-04-24 00:54:21,904 [ scc.repo] DEBUG - PR 606 knabar 'Fix issues related to images with very high channel count' 2025-04-24 00:54:22,155 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:22,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-04-24 00:54:22,651 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:22,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2025-04-24 00:54:23,140 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:23,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-04-24 00:54:23,664 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:23,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-24 00:54:24,164 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:24,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-24 00:54:24,694 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:24,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-04-24 00:54:25,241 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:25,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-04-24 00:54:25,695 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:25,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-04-24 00:54:26,142 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:26,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-04-24 00:54:26,380 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-04-24 00:54:26,631 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:26,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-04-24 00:54:27,137 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:27,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-04-24 00:54:27,659 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:27,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-24 00:54:28,157 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:28,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-24 00:54:28,646 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:28,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-04-24 00:54:29,110 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:29,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-04-24 00:54:29,572 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:29,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-04-24 00:54:30,037 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:30,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-04-24 00:54:30,243 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2025-04-24 00:54:30,494 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:30,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-04-24 00:54:31,024 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:31,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-04-24 00:54:31,502 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:31,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-04-24 00:54:32,010 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:32,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-24 00:54:32,533 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:32,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-24 00:54:33,074 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:33,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-04-24 00:54:33,608 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:33,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-04-24 00:54:34,057 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:34,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-04-24 00:54:34,530 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:34,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-04-24 00:54:34,731 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-04-24 00:54:34,981 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:35,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-04-24 00:54:35,512 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:35,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-04-24 00:54:35,986 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:36,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-04-24 00:54:36,522 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:36,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-24 00:54:36,990 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:37,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-24 00:54:37,529 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:37,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-04-24 00:54:37,979 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:38,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-04-24 00:54:38,431 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:38,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-04-24 00:54:38,887 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:39,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-04-24 00:54:39,076 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-04-24 00:54:39,327 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:39,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-04-24 00:54:39,810 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:40,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-04-24 00:54:40,292 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:40,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-04-24 00:54:40,790 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:41,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-04-24 00:54:41,276 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:41,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-04-24 00:54:41,781 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:41,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-24 00:54:42,244 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:42,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-04-24 00:54:42,754 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:42,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2 2025-04-24 00:54:42,960 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-04-24 00:54:43,211 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:43,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-04-24 00:54:43,727 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:44,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-04-24 00:54:44,294 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:44,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-04-24 00:54:44,819 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:45,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-24 00:54:45,310 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:45,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-04-24 00:54:45,816 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:46,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2 2025-04-24 00:54:46,004 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-04-24 00:54:46,255 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:46,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-04-24 00:54:46,721 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:46,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-04-24 00:54:47,220 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:47,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-04-24 00:54:47,735 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:47,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-24 00:54:48,239 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:48,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-24 00:54:48,490 [ scc.repo] DEBUG ## Branches found: 2025-04-24 00:54:48,490 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-04-24 00:54:48,491 [ scc.git] DEBUG Get sha1 of %s 2025-04-24 00:54:48,491 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:54:48,494 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-24 00:54:48,496 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-24 00:54:48,497 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-24 00:54:48,500 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-24 00:54:48,503 [ scc.git] DEBUG Already up to date. 2025-04-24 00:54:48,503 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-04-24 00:54:48,810 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-24 00:54:48,810 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-04-24 00:54:48,815 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-04-24 00:54:49,102 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-24 00:54:49,102 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-04-24 00:54:49,106 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-04-24 00:54:49,390 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-24 00:54:49,390 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-04-24 00:54:49,394 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-04-24 00:54:49,655 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-24 00:54:49,655 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-04-24 00:54:49,660 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-04-24 00:54:49,923 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-24 00:54:49,923 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-04-24 00:54:49,928 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-04-24 00:54:50,216 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-24 00:54:50,216 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-04-24 00:54:50,220 [ scc.git] DEBUG Calling 'git fetch origin pull/606/head' 2025-04-24 00:54:50,479 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-24 00:54:50,479 [ scc.git] DEBUG * branch refs/pull/606/head -> FETCH_HEAD 2025-04-24 00:54:50,484 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-04-24 00:54:50,745 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-24 00:54:50,745 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-04-24 00:54:50,749 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head' 2025-04-24 00:54:51,007 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-24 00:54:51,008 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD 2025-04-24 00:54:51,012 [ scc.git] DEBUG Calling 'git fetch origin pull/614/head' 2025-04-24 00:54:51,275 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-24 00:54:51,275 [ scc.git] DEBUG * branch refs/pull/614/head -> FETCH_HEAD 2025-04-24 00:54:51,279 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head' 2025-04-24 00:54:51,538 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-24 00:54:51,538 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD 2025-04-24 00:54:51,543 [ scc.git] DEBUG ## Unique users: [] 2025-04-24 00:54:51,543 [ scc.git] DEBUG Get sha1 of %s 2025-04-24 00:54:51,543 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:54:51,545 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-04-24 00:54:51,553 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:54:51,555 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-04-24 00:54:51,574 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-04-24 00:54:51,574 [ scc.git] DEBUG Auto-merging setup.py 2025-04-24 00:54:51,576 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-24 00:54:51,579 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-04-24 00:54:51,579 [ scc.git] DEBUG setup.py | 1 + 2025-04-24 00:54:51,579 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-04-24 00:54:51,581 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:51,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:54:51,741 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-04-24 00:54:51,749 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:54:51,751 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-04-24 00:54:51,772 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-04-24 00:54:51,772 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-04-24 00:54:51,774 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-24 00:54:51,778 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-04-24 00:54:51,778 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-04-24 00:54:51,778 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-04-24 00:54:51,992 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:52,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:54:52,160 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-04-24 00:54:52,169 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:54:52,171 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-04-24 00:54:52,191 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-24 00:54:52,196 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-04-24 00:54:52,196 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-04-24 00:54:52,411 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:52,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:54:52,572 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-04-24 00:54:52,580 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:54:52,582 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-04-24 00:54:52,602 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-24 00:54:52,606 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-04-24 00:54:52,606 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-04-24 00:54:52,823 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:52,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:54:52,990 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-04-24 00:54:52,998 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:54:53,000 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-04-24 00:54:53,021 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-24 00:54:53,026 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-04-24 00:54:53,026 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-04-24 00:54:53,026 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-04-24 00:54:53,026 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-04-24 00:54:53,026 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-04-24 00:54:53,026 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-04-24 00:54:53,026 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-04-24 00:54:53,027 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-04-24 00:54:53,027 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-04-24 00:54:53,027 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-04-24 00:54:53,027 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-04-24 00:54:53,027 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-04-24 00:54:53,241 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:53,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:54:53,416 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-04-24 00:54:53,425 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:54:53,427 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-04-24 00:54:53,454 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-04-24 00:54:53,456 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-24 00:54:53,462 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-04-24 00:54:53,462 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-04-24 00:54:53,462 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-04-24 00:54:53,462 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-04-24 00:54:53,667 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:53,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:54:53,836 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b360c3125f9471bf4001447f35c732507c2f2022' 2025-04-24 00:54:53,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:54:53,846 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 606 (Fix issues related to images with very high channel count) b360c3125f9471bf4001447f35c732507c2f2022' 2025-04-24 00:54:53,869 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-24 00:54:53,873 [ scc.git] DEBUG .../webgateway/static/webgateway/js/ome.viewport.js | 17 +++++++++++++++-- 2025-04-24 00:54:53,873 [ scc.git] DEBUG 1 file changed, 15 insertions(+), 2 deletions(-) 2025-04-24 00:54:54,087 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:54,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:54:54,285 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-04-24 00:54:54,294 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:54:54,296 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-04-24 00:54:54,318 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-24 00:54:54,322 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++ 2025-04-24 00:54:54,322 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++---------- 2025-04-24 00:54:54,323 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-) 2025-04-24 00:54:54,536 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:54,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:54:54,726 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a8c190ba1c823672143ab90d77020d652e2c084d' 2025-04-24 00:54:54,735 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:54:54,737 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) a8c190ba1c823672143ab90d77020d652e2c084d' 2025-04-24 00:54:54,757 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-24 00:54:54,762 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 42 ++++++++++++++++------ 2025-04-24 00:54:54,762 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 38 ++++++++++++++------ 2025-04-24 00:54:54,762 [ scc.git] DEBUG 2 files changed, 60 insertions(+), 20 deletions(-) 2025-04-24 00:54:54,977 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:55,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:54:55,128 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-04-24 00:54:55,136 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:54:55,138 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 614 (CodeQL workflow updates) da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-04-24 00:54:55,157 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-24 00:54:55,160 [ scc.git] DEBUG .github/workflows/codeql-analysis.yml | 55 +++++++---------------------------- 2025-04-24 00:54:55,160 [ scc.git] DEBUG 1 file changed, 11 insertions(+), 44 deletions(-) 2025-04-24 00:54:55,379 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:55,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:54:55,567 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c6401a8d78f907d300ef6a6bb673efa86374ecc4' 2025-04-24 00:54:55,576 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:54:55,578 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Use the release/v1 branch for the PyPA action publishing to PyPI) c6401a8d78f907d300ef6a6bb673efa86374ecc4' 2025-04-24 00:54:55,597 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-24 00:54:55,600 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-04-24 00:54:55,601 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-04-24 00:54:55,818 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:55,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:54:55,992 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-24 00:54:56,031 [ scc.git] DEBUG Get sha1 of %s 2025-04-24 00:54:56,031 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-24 00:54:56,033 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-24 00:54:56,070 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-24 00:54:56,079 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f650dc6d710> has no local changes 2025-04-24 00:54:56,079 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 606 knabar 'Fix issues related to images with very high channel count' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 614 sbesson 'CodeQL workflow updates' - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-python-superbuild-push#386 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/386/)' 2025-04-24 00:54:56,088 [ scc.git] DEBUG [detached HEAD 29a464fc9] merge master -Dorg -Ssuccess-only 2025-04-24 00:54:56,088 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-24 00:54:56,088 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-24 00:54:56,135 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-04-24 00:54:56,243 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:56,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:54:56,408 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-04-24 00:54:56,653 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:56,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:54:56,815 [ scc.config] DEBUG Found submodule.omero-py.url 2025-04-24 00:54:57,060 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:57,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:54:57,227 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-04-24 00:54:57,472 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:57,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:54:57,641 [ scc.config] DEBUG Found submodule.omero-web.url 2025-04-24 00:54:57,886 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-24 00:54:58,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-24 00:54:58,053 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-24 00:54:58,082 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f650b93fcd0> has local changes 2025-04-24 00:54:58,082 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 606 knabar 'Fix issues related to images with very high channel count' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 614 sbesson 'CodeQL workflow updates' - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-python-superbuild-push#386 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/386/)' 2025-04-24 00:54:58,090 [ scc.git] DEBUG [detached HEAD 5422706] merge master -Dorg -Ssuccess-only 2025-04-24 00:54:58,090 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-04-24 00:54:58,090 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-04-24 00:54:58,090 [ scc.merge] INFO Already up to date. 2025-04-24 00:54:58,090 [ scc.merge] INFO 2025-04-24 00:54:58,090 [ scc.merge] INFO 2025-04-24 00:54:58,090 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-04-24 00:54:58,090 [ scc.merge] INFO Already up to date. 2025-04-24 00:54:58,090 [ scc.merge] INFO 2025-04-24 00:54:58,090 [ scc.merge] INFO Merged PRs: 2025-04-24 00:54:58,090 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-04-24 00:54:58,090 [ scc.merge] INFO 2025-04-24 00:54:58,090 [ scc.merge] INFO Repository: ome/omero-marshal 2025-04-24 00:54:58,090 [ scc.merge] INFO Excluded PRs: 2025-04-24 00:54:58,090 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-04-24 00:54:58,090 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-04-24 00:54:58,090 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-04-24 00:54:58,090 [ scc.merge] INFO Already up to date. 2025-04-24 00:54:58,090 [ scc.merge] INFO 2025-04-24 00:54:58,090 [ scc.merge] INFO Merged PRs: 2025-04-24 00:54:58,090 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-04-24 00:54:58,090 [ scc.merge] INFO 2025-04-24 00:54:58,090 [ scc.merge] INFO Repository: ome/omero-py 2025-04-24 00:54:58,090 [ scc.merge] INFO Excluded PRs: 2025-04-24 00:54:58,090 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric) 2025-04-24 00:54:58,091 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) 2025-04-24 00:54:58,091 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-04-24 00:54:58,091 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) 2025-04-24 00:54:58,091 [ scc.merge] INFO Already up to date. 2025-04-24 00:54:58,091 [ scc.merge] INFO 2025-04-24 00:54:58,091 [ scc.merge] INFO Merged PRs: 2025-04-24 00:54:58,091 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-04-24 00:54:58,091 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-04-24 00:54:58,091 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-04-24 00:54:58,091 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-04-24 00:54:58,091 [ scc.merge] INFO - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' 2025-04-24 00:54:58,091 [ scc.merge] INFO 2025-04-24 00:54:58,091 [ scc.merge] INFO Repository: ome/omero-scripts 2025-04-24 00:54:58,091 [ scc.merge] INFO Excluded PRs: 2025-04-24 00:54:58,091 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-04-24 00:54:58,091 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-04-24 00:54:58,091 [ scc.merge] INFO Already up to date. 2025-04-24 00:54:58,091 [ scc.merge] INFO 2025-04-24 00:54:58,091 [ scc.merge] INFO Merged PRs: 2025-04-24 00:54:58,091 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-04-24 00:54:58,091 [ scc.merge] INFO 2025-04-24 00:54:58,091 [ scc.merge] INFO Conflicting PRs (not included): 2025-04-24 00:54:58,091 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-04-24 00:54:58,091 [ scc.merge] INFO 2025-04-24 00:54:58,091 [ scc.merge] INFO Repository: ome/omero-web 2025-04-24 00:54:58,091 [ scc.merge] INFO Excluded PRs: 2025-04-24 00:54:58,091 [ scc.merge] INFO - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-04-24 00:54:58,091 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-04-24 00:54:58,091 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2025-04-24 00:54:58,091 [ scc.merge] INFO Already up to date. 2025-04-24 00:54:58,091 [ scc.merge] INFO 2025-04-24 00:54:58,091 [ scc.merge] INFO Merged PRs: 2025-04-24 00:54:58,091 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-04-24 00:54:58,091 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-04-24 00:54:58,091 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-04-24 00:54:58,091 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-04-24 00:54:58,091 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2025-04-24 00:54:58,091 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-04-24 00:54:58,091 [ scc.merge] INFO - PR 606 knabar 'Fix issues related to images with very high channel count' 2025-04-24 00:54:58,091 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-04-24 00:54:58,091 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2025-04-24 00:54:58,092 [ scc.merge] INFO - PR 614 sbesson 'CodeQL workflow updates' 2025-04-24 00:54:58,092 [ scc.merge] INFO - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-04-24 00:54:58,092 [ scc.merge] INFO 2025-04-24 00:54:58,092 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-04-24 00:54:58,092 [ scc.git] DEBUG Calling 'git remote' 2025-04-24 00:54:58,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-04-24 00:54:58,094 [ scc.git] DEBUG Calling 'git remote' 2025-04-24 00:54:58,096 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-24 00:54:58,096 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-04-24 00:54:58,096 [ scc.git] DEBUG Calling 'git remote' 2025-04-24 00:54:58,098 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-24 00:54:58,098 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-04-24 00:54:58,098 [ scc.git] DEBUG Calling 'git remote' 2025-04-24 00:54:58,100 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-24 00:54:58,101 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-04-24 00:54:58,101 [ scc.git] DEBUG Calling 'git remote' 2025-04-24 00:54:58,103 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-24 00:54:58,103 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-04-24 00:54:58,103 [ scc.git] DEBUG Calling 'git remote' 2025-04-24 00:54:58,105 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 6d44f66 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from e485be49 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 950b28b nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 4b979f847 nothing to commit, working tree clean HEAD detached from 155f8de nothing to commit, working tree clean 2025-04-24 00:55:27,192 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS