![[Jenkins]](/jenkins/static/03ee4b55/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 470 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 155f8de84051621b91200b6b3617c057b622fad4 (refs/remotes/origin/master) Commit message: "Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 155f8de84051621b91200b6b3617c057b622fad4 # timeout=10 > git rev-list --no-walk 155f8de84051621b91200b6b3617c057b622fad4 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 420 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.1.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.1.1 WARNING: There was an error checking the latest version of pip. + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.6.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.10-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.13.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.3-cp39-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.12 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting pycparser (from cffi>=1.12->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.4.26-py3-none-any.whl.metadata (2.5 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached PyGithub-2.6.1-py3-none-any.whl (410 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-44.0.3-cp39-abi3-manylinux_2_34_x86_64.whl (4.2 MB) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (147 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.4.26-py3-none-any.whl (159 kB) Using cached typing_extensions-4.13.2-py3-none-any.whl (45 kB) Using cached Deprecated-1.2.18-py2.py3-none-any.whl (10.0 kB) Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (83 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Using cached ruamel.yaml-0.18.10-py3-none-any.whl (117 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.18 PyGithub-2.6.1 PyYAML-6.0.2 certifi-2025.4.26 cffi-1.17.1 charset-normalizer-3.4.2 cryptography-44.0.3 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.10 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.13.2 urllib3-1.26.20 wrapt-1.17.2 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-05-09 00:34:07,859 [ scc.config] DEBUG Found github.token 2025-05-09 00:34:07,861 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:08,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:34:08,297 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:08,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:34:08,732 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:08,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-05-09 00:34:08,891 [ scc.gh] DEBUG 3813 remaining from 5000 (Reset at 00:05 2025-05-09 00:34:08,892 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-09 00:34:08,894 [ scc.git] DEBUG Check current status 2025-05-09 00:34:08,894 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-09 00:34:08,897 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-05-09 00:34:08,897 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-09 00:34:08,937 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-05-09 00:34:08,941 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-05-09 00:34:08,949 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-05-09 00:34:08,954 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-05-09 00:34:08,958 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-05-09 00:34:08,961 [ scc.config] DEBUG Found remote.origin.url 2025-05-09 00:34:09,142 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:09,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-05-09 00:34:09,683 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:09,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-09 00:34:10,174 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:10,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-09 00:34:10,620 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:10,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-09 00:34:11,072 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:11,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-09 00:34:11,248 [ scc.git] DEBUG Resetting... 2025-05-09 00:34:11,248 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-05-09 00:34:11,253 [ scc.git] DEBUG HEAD is now at 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-05-09 00:34:11,253 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-05-09 00:34:11,307 [ scc.git] DEBUG Check current status 2025-05-09 00:34:11,307 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-09 00:34:11,309 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-05-09 00:34:11,309 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-09 00:34:11,349 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-05-09 00:34:11,353 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-05-09 00:34:11,361 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-05-09 00:34:11,366 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-05-09 00:34:11,370 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-05-09 00:34:11,371 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-05-09 00:34:11,371 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-05-09 00:34:11,371 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-05-09 00:34:11,371 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-05-09 00:34:11,371 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-05-09 00:34:11,371 [ scc.repo] DEBUG ## PRs found: 2025-05-09 00:34:11,499 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:11,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-05-09 00:34:11,671 [ scc.repo] DEBUG ## Branches found: 2025-05-09 00:34:11,671 [ scc.git] DEBUG Get sha1 of %s 2025-05-09 00:34:11,671 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:34:11,673 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-09 00:34:11,675 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-09 00:34:11,675 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-09 00:34:11,678 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-09 00:34:11,681 [ scc.git] DEBUG Already up to date. 2025-05-09 00:34:11,681 [ scc.git] DEBUG ## Unique users: [] 2025-05-09 00:34:11,681 [ scc.git] DEBUG Get sha1 of %s 2025-05-09 00:34:11,681 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:34:11,683 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-09 00:34:11,723 [ scc.git] DEBUG Get sha1 of %s 2025-05-09 00:34:11,723 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:34:11,725 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-09 00:34:11,761 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38b3fa4950> has no local changes 2025-05-09 00:34:11,761 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#400 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/400/)' 2025-05-09 00:34:11,786 [ scc.git] DEBUG [detached HEAD fd3bc17] merge master -Dorg -Snone 2025-05-09 00:34:11,786 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-05-09 00:34:11,786 [ scc.merge] INFO Already up to date. 2025-05-09 00:34:11,786 [ scc.merge] INFO 2025-05-09 00:34:11,786 [ scc.merge] INFO 2025-05-09 00:34:11,786 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-05-09 00:34:11,786 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-05-09 00:34:13,759 [ scc.config] DEBUG Found github.token 2025-05-09 00:34:13,760 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:13,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:34:14,191 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:14,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:34:14,602 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:14,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-05-09 00:34:14,754 [ scc.gh] DEBUG 3805 remaining from 5000 (Reset at 00:05 2025-05-09 00:34:14,755 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-09 00:34:14,757 [ scc.git] DEBUG Check current status 2025-05-09 00:34:14,757 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-09 00:34:14,760 [ scc.git] DEBUG fd3bc17 merge master -Dorg -Snone 2025-05-09 00:34:14,760 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-09 00:34:14,800 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-05-09 00:34:14,804 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-05-09 00:34:14,813 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-05-09 00:34:14,817 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-05-09 00:34:14,821 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-05-09 00:34:14,824 [ scc.config] DEBUG Found remote.origin.url 2025-05-09 00:34:14,824 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-05-09 00:34:14,825 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-05-09 00:34:15,005 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:15,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-05-09 00:34:15,525 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:15,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-09 00:34:16,000 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:16,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-09 00:34:16,422 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:16,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-09 00:34:16,856 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:17,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-09 00:34:17,041 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-09 00:34:17,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-05-09 00:34:17,087 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-09 00:34:17,089 [ scc.git] DEBUG Check current status 2025-05-09 00:34:17,089 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-09 00:34:17,092 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-05-09 00:34:17,092 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-09 00:34:17,131 [ scc.config] DEBUG Found remote.origin.url 2025-05-09 00:34:17,291 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:17,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-05-09 00:34:17,845 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:18,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-09 00:34:18,342 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:18,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-09 00:34:18,780 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:18,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-09 00:34:19,210 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:19,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-09 00:34:19,400 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-09 00:34:19,438 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-09 00:34:19,439 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-05-09 00:34:19,439 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-09 00:34:19,441 [ scc.git] DEBUG Check current status 2025-05-09 00:34:19,441 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-09 00:34:19,443 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build 2025-05-09 00:34:19,444 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-09 00:34:19,482 [ scc.config] DEBUG Found remote.origin.url 2025-05-09 00:34:19,651 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:19,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-05-09 00:34:20,184 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:20,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-09 00:34:20,693 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:20,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-09 00:34:21,127 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:21,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-09 00:34:21,553 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:21,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-09 00:34:21,740 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-09 00:34:21,779 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-09 00:34:21,779 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-05-09 00:34:21,779 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-09 00:34:21,782 [ scc.git] DEBUG Check current status 2025-05-09 00:34:21,782 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-09 00:34:21,784 [ scc.git] DEBUG e485be49 Merge pull request #427 from Rdornier/mirror-java-download 2025-05-09 00:34:21,785 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-09 00:34:21,824 [ scc.config] DEBUG Found remote.origin.url 2025-05-09 00:34:21,990 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:22,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-05-09 00:34:22,564 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:22,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-09 00:34:23,023 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:23,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-09 00:34:23,455 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:23,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-09 00:34:23,884 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:24,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-09 00:34:24,058 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-09 00:34:24,097 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-09 00:34:24,098 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-05-09 00:34:24,098 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-09 00:34:24,100 [ scc.git] DEBUG Check current status 2025-05-09 00:34:24,100 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-09 00:34:24,103 [ scc.git] DEBUG 950b28b Merge pull request #225 from will-moore/test_fixes 2025-05-09 00:34:24,103 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-09 00:34:24,143 [ scc.config] DEBUG Found remote.origin.url 2025-05-09 00:34:24,143 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-05-09 00:34:24,308 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:24,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-05-09 00:34:24,795 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:25,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-09 00:34:25,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:25,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-09 00:34:25,694 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:25,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-09 00:34:26,139 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:26,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-09 00:34:26,306 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-09 00:34:26,345 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-09 00:34:26,345 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-05-09 00:34:26,345 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-09 00:34:26,347 [ scc.git] DEBUG Check current status 2025-05-09 00:34:26,347 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-09 00:34:26,350 [ scc.git] DEBUG 4b979f847 Bump version: 5.29.0 → 5.29.1.dev0 2025-05-09 00:34:26,350 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-09 00:34:26,390 [ scc.config] DEBUG Found remote.origin.url 2025-05-09 00:34:26,557 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:26,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-05-09 00:34:27,051 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:27,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-09 00:34:27,523 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:27,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-09 00:34:27,957 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:28,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-09 00:34:28,389 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:28,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-09 00:34:28,560 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-09 00:34:28,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-09 00:34:28,600 [ scc.git] DEBUG Resetting... 2025-05-09 00:34:28,600 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-05-09 00:34:28,605 [ scc.git] DEBUG HEAD is now at fd3bc17 merge master -Dorg -Snone 2025-05-09 00:34:28,605 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-05-09 00:34:28,659 [ scc.git] DEBUG Check current status 2025-05-09 00:34:28,659 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-09 00:34:28,662 [ scc.git] DEBUG fd3bc17 merge master -Dorg -Snone 2025-05-09 00:34:28,662 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-09 00:34:28,702 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-05-09 00:34:28,706 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-05-09 00:34:28,715 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-05-09 00:34:28,719 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-05-09 00:34:28,723 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-05-09 00:34:28,724 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-05-09 00:34:28,724 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-05-09 00:34:28,725 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-05-09 00:34:28,725 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-05-09 00:34:28,725 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-05-09 00:34:28,725 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-05-09 00:34:28,725 [ scc.repo] DEBUG ## PRs found: 2025-05-09 00:34:28,810 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:28,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-05-09 00:34:28,994 [ scc.repo] DEBUG ## Branches found: 2025-05-09 00:34:28,994 [ scc.git] DEBUG Get sha1 of %s 2025-05-09 00:34:28,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:34:28,996 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-09 00:34:28,999 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-09 00:34:28,999 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-09 00:34:29,001 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-09 00:34:29,004 [ scc.git] DEBUG Already up to date. 2025-05-09 00:34:29,004 [ scc.git] DEBUG ## Unique users: [] 2025-05-09 00:34:29,004 [ scc.git] DEBUG Get sha1 of %s 2025-05-09 00:34:29,004 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:34:29,006 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-09 00:34:29,047 [ scc.git] DEBUG Get sha1 of %s 2025-05-09 00:34:29,047 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:34:29,049 [ scc.repo] DEBUG ## PRs found: 2025-05-09 00:34:29,245 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:29,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-05-09 00:34:29,767 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:29,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-05-09 00:34:30,241 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:30,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-05-09 00:34:30,748 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:31,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-05-09 00:34:31,275 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:31,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-09 00:34:31,764 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:31,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-05-09 00:34:32,228 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:32,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-05-09 00:34:32,406 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-05-09 00:34:32,407 [ scc.repo] DEBUG ## Branches found: 2025-05-09 00:34:32,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-05-09 00:34:32,407 [ scc.git] DEBUG Get sha1 of %s 2025-05-09 00:34:32,407 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:34:32,409 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-09 00:34:32,412 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-09 00:34:32,412 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-09 00:34:32,415 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-09 00:34:32,418 [ scc.git] DEBUG Already up to date. 2025-05-09 00:34:32,418 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-05-09 00:34:32,729 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-05-09 00:34:32,729 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-05-09 00:34:32,734 [ scc.git] DEBUG ## Unique users: [] 2025-05-09 00:34:32,734 [ scc.git] DEBUG Get sha1 of %s 2025-05-09 00:34:32,734 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:34:32,736 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-05-09 00:34:32,739 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:34:32,742 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-05-09 00:34:32,755 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-05-09 00:34:32,755 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-05-09 00:34:32,755 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-05-09 00:34:32,755 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-05-09 00:34:32,755 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-05-09 00:34:32,755 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-05-09 00:34:32,755 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-05-09 00:34:32,755 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-05-09 00:34:32,755 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-05-09 00:34:32,756 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-09 00:34:32,759 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-05-09 00:34:32,759 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-05-09 00:34:32,760 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-05-09 00:34:32,760 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-05-09 00:34:32,760 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-05-09 00:34:32,760 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-05-09 00:34:32,760 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-05-09 00:34:32,760 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-05-09 00:34:32,760 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-05-09 00:34:32,760 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-05-09 00:34:32,761 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:32,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:34:32,935 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-09 00:34:32,973 [ scc.git] DEBUG Get sha1 of %s 2025-05-09 00:34:32,973 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:34:32,976 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-09 00:34:33,013 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-09 00:34:33,017 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6fc66b4790> has no local changes 2025-05-09 00:34:33,017 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#400 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/400/)' 2025-05-09 00:34:33,024 [ scc.git] DEBUG [detached HEAD c559060] merge master -Dorg -Ssuccess-only 2025-05-09 00:34:33,024 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-09 00:34:33,024 [ scc.repo] DEBUG ## PRs found: 2025-05-09 00:34:33,186 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:33,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-05-09 00:34:33,717 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:33,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-05-09 00:34:34,189 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:34,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2025-05-09 00:34:34,692 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:34,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-05-09 00:34:35,164 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:35,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-05-09 00:34:35,623 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:35,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-05-09 00:34:36,199 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:36,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-09 00:34:36,669 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:36,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-05-09 00:34:37,231 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:37,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-05-09 00:34:37,418 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-05-09 00:34:37,669 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:37,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-05-09 00:34:38,167 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:38,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-05-09 00:34:38,640 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:38,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-05-09 00:34:39,125 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:39,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-05-09 00:34:39,363 [ scc.repo] DEBUG ## Branches found: 2025-05-09 00:34:39,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-05-09 00:34:39,363 [ scc.git] DEBUG Get sha1 of %s 2025-05-09 00:34:39,364 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:34:39,366 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-09 00:34:39,369 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-09 00:34:39,369 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-09 00:34:39,372 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-09 00:34:39,375 [ scc.git] DEBUG Already up to date. 2025-05-09 00:34:39,375 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-05-09 00:34:39,705 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-05-09 00:34:39,705 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-05-09 00:34:39,709 [ scc.git] DEBUG ## Unique users: [] 2025-05-09 00:34:39,709 [ scc.git] DEBUG Get sha1 of %s 2025-05-09 00:34:39,709 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:34:39,712 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-05-09 00:34:39,716 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:34:39,718 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-05-09 00:34:39,728 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-05-09 00:34:39,729 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-09 00:34:39,732 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-05-09 00:34:39,732 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-05-09 00:34:39,732 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-05-09 00:34:39,733 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:39,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:34:39,892 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-09 00:34:39,931 [ scc.git] DEBUG Get sha1 of %s 2025-05-09 00:34:39,931 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:34:39,934 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-09 00:34:39,971 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-09 00:34:39,975 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6fc5802f50> has no local changes 2025-05-09 00:34:39,975 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#400 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/400/)' 2025-05-09 00:34:39,982 [ scc.git] DEBUG [detached HEAD 182d60a] merge master -Dorg -Ssuccess-only 2025-05-09 00:34:39,982 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-09 00:34:39,982 [ scc.repo] DEBUG ## PRs found: 2025-05-09 00:34:40,143 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:40,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-05-09 00:34:40,785 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:41,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None 2025-05-09 00:34:41,260 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:41,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/453 HTTP/1.1" 200 None 2025-05-09 00:34:41,725 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:41,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/453/comments HTTP/1.1" 200 None 2025-05-09 00:34:42,207 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:42,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-05-09 00:34:42,712 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:42,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-09 00:34:43,209 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:43,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-09 00:34:43,705 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:43,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-05-09 00:34:44,155 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:44,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ff9ad445b6af7725ab17a39185630b8919e42bab?per_page=1 HTTP/1.1" 200 None 2025-05-09 00:34:44,596 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:44,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-05-09 00:34:45,039 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:45,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/status HTTP/1.1" 200 None 2025-05-09 00:34:45,311 [ scc.repo] DEBUG - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' 2025-05-09 00:34:45,562 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:45,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None 2025-05-09 00:34:46,027 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:46,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450/comments HTTP/1.1" 200 None 2025-05-09 00:34:46,512 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:46,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None 2025-05-09 00:34:47,004 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:47,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None 2025-05-09 00:34:47,305 [ scc.repo] DEBUG # ... Exclude label: exclude 2025-05-09 00:34:47,555 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:47,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-05-09 00:34:48,015 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:48,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-05-09 00:34:48,495 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:48,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-05-09 00:34:49,022 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:49,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-09 00:34:49,497 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:49,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-09 00:34:49,982 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:50,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-05-09 00:34:50,509 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:50,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2025-05-09 00:34:50,966 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:51,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-05-09 00:34:51,453 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:51,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2025-05-09 00:34:51,653 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-05-09 00:34:51,904 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:52,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-05-09 00:34:52,390 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:52,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-05-09 00:34:52,847 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:53,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-05-09 00:34:53,379 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:53,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-09 00:34:53,883 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:54,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-09 00:34:54,401 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:54,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-05-09 00:34:54,868 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:55,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2025-05-09 00:34:55,332 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:55,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-05-09 00:34:55,849 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:56,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-09 00:34:56,314 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:56,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-05-09 00:34:56,772 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:56,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2025-05-09 00:34:56,960 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-05-09 00:34:57,211 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:57,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-05-09 00:34:57,685 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:57,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-05-09 00:34:58,175 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:58,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-05-09 00:34:58,685 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:58,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-09 00:34:59,133 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:59,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-05-09 00:34:59,624 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:34:59,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2 2025-05-09 00:34:59,792 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-05-09 00:35:00,043 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:00,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-05-09 00:35:00,529 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:00,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-05-09 00:35:01,085 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:01,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-05-09 00:35:01,580 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:01,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-05-09 00:35:02,165 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:02,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-05-09 00:35:02,681 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:02,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-09 00:35:03,197 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:03,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-05-09 00:35:03,639 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:03,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-05-09 00:35:03,840 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-05-09 00:35:03,840 [ scc.repo] DEBUG ## Branches found: 2025-05-09 00:35:03,840 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-05-09 00:35:03,840 [ scc.git] DEBUG Get sha1 of %s 2025-05-09 00:35:03,840 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:35:03,843 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-09 00:35:03,846 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-09 00:35:03,846 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-09 00:35:03,849 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-09 00:35:03,852 [ scc.git] DEBUG Already up to date. 2025-05-09 00:35:03,852 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-05-09 00:35:04,172 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-09 00:35:04,172 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-05-09 00:35:04,176 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-05-09 00:35:04,456 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-09 00:35:04,456 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-05-09 00:35:04,460 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-05-09 00:35:04,739 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-09 00:35:04,739 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-05-09 00:35:04,743 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-05-09 00:35:05,065 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-09 00:35:05,065 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-05-09 00:35:05,070 [ scc.git] DEBUG Calling 'git fetch origin pull/453/head' 2025-05-09 00:35:05,350 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-09 00:35:05,350 [ scc.git] DEBUG * branch refs/pull/453/head -> FETCH_HEAD 2025-05-09 00:35:05,354 [ scc.git] DEBUG ## Unique users: [] 2025-05-09 00:35:05,354 [ scc.git] DEBUG Get sha1 of %s 2025-05-09 00:35:05,354 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:35:05,356 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-05-09 00:35:05,368 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:35:05,370 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-05-09 00:35:05,393 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-05-09 00:35:05,393 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-05-09 00:35:05,395 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-09 00:35:05,399 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-05-09 00:35:05,399 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-05-09 00:35:05,399 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-05-09 00:35:05,400 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:05,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:35:05,573 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-05-09 00:35:05,585 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:35:05,587 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-05-09 00:35:05,608 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-09 00:35:05,611 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-05-09 00:35:05,611 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-05-09 00:35:05,611 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-05-09 00:35:05,611 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-05-09 00:35:05,611 [ scc.git] DEBUG create mode 100644 connect.py 2025-05-09 00:35:05,824 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:06,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:35:06,018 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-05-09 00:35:06,031 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:35:06,033 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-05-09 00:35:06,055 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-05-09 00:35:06,056 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-09 00:35:06,060 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-05-09 00:35:06,060 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-05-09 00:35:06,269 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:06,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:35:06,434 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-05-09 00:35:06,446 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:35:06,448 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-05-09 00:35:06,482 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-05-09 00:35:06,483 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-09 00:35:06,490 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-05-09 00:35:06,490 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-05-09 00:35:06,685 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:06,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:35:06,844 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ff9ad445b6af7725ab17a39185630b8919e42bab' 2025-05-09 00:35:06,856 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:35:06,858 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 453 (getObject() and getExternalInfo() load externalInfo) ff9ad445b6af7725ab17a39185630b8919e42bab' 2025-05-09 00:35:06,895 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-05-09 00:35:06,897 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-09 00:35:06,904 [ scc.git] DEBUG src/omero/gateway/__init__.py | 21 ++++++++++++++++++ 2025-05-09 00:35:06,904 [ scc.git] DEBUG src/omero/plugins/obj.py | 50 ++++++++++++++++++++++++++++++++++++++++++- 2025-05-09 00:35:06,904 [ scc.git] DEBUG 2 files changed, 70 insertions(+), 1 deletion(-) 2025-05-09 00:35:07,095 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:07,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:35:07,263 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-09 00:35:07,302 [ scc.git] DEBUG Get sha1 of %s 2025-05-09 00:35:07,302 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:35:07,305 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-09 00:35:07,342 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-09 00:35:07,350 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6fc566dd10> has no local changes 2025-05-09 00:35:07,350 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' Generated by OMERO-python-superbuild-push#400 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/400/)' 2025-05-09 00:35:07,357 [ scc.git] DEBUG [detached HEAD bca5ea4c] merge master -Dorg -Ssuccess-only 2025-05-09 00:35:07,357 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-09 00:35:07,357 [ scc.git] INFO Overriding base-branch from master to develop 2025-05-09 00:35:07,357 [ scc.repo] DEBUG ## PRs found: 2025-05-09 00:35:07,514 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:07,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-05-09 00:35:08,117 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:08,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-05-09 00:35:08,640 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:08,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-05-09 00:35:09,112 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:09,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-05-09 00:35:09,647 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:09,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-09 00:35:10,139 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:10,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-09 00:35:10,650 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:10,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-05-09 00:35:11,186 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:11,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-05-09 00:35:11,398 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-05-09 00:35:11,649 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:11,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-05-09 00:35:12,147 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:12,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-05-09 00:35:12,629 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:12,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-05-09 00:35:13,167 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:13,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-09 00:35:13,714 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:13,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-05-09 00:35:14,213 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:14,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-05-09 00:35:14,405 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-05-09 00:35:14,656 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:14,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-05-09 00:35:15,193 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:15,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-05-09 00:35:15,768 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:15,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-05-09 00:35:16,238 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:16,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-05-09 00:35:16,511 [ scc.repo] DEBUG ## Branches found: 2025-05-09 00:35:16,511 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-05-09 00:35:16,511 [ scc.git] DEBUG Get sha1 of %s 2025-05-09 00:35:16,511 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:35:16,514 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-05-09 00:35:16,516 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-09 00:35:16,516 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-05-09 00:35:16,520 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-05-09 00:35:16,523 [ scc.git] DEBUG Already up to date. 2025-05-09 00:35:16,523 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-05-09 00:35:16,822 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-05-09 00:35:16,822 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-05-09 00:35:16,827 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-05-09 00:35:17,102 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-05-09 00:35:17,102 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-05-09 00:35:17,106 [ scc.git] DEBUG ## Unique users: [] 2025-05-09 00:35:17,106 [ scc.git] DEBUG Get sha1 of %s 2025-05-09 00:35:17,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:35:17,108 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-05-09 00:35:17,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:35:17,116 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-05-09 00:35:17,126 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-05-09 00:35:17,127 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-05-09 00:35:17,127 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-05-09 00:35:17,129 [ scc.git] DEBUG Calling 'git reset --hard 950b28b31e228ae7b317cbd159235faf4023e4dc' 2025-05-09 00:35:17,133 [ scc.git] DEBUG HEAD is now at 950b28b Merge pull request #225 from will-moore/test_fixes 2025-05-09 00:35:17,134 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:17,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:35:17,324 [ scc.git] DEBUG Calling 'git merge-base 950b28b31e228ae7b317cbd159235faf4023e4dc 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-05-09 00:35:17,330 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..950b28b31e228ae7b317cbd159235faf4023e4dc' 2025-05-09 00:35:17,334 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#400](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/400/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/400/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-05-09 00:35:17,336 [ scc.config] DEBUG Found github.token 2025-05-09 00:35:17,336 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-05-09 00:35:17,336 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-05-09 00:35:17,341 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:35:17,343 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-05-09 00:35:17,353 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-09 00:35:17,356 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-05-09 00:35:17,356 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-05-09 00:35:17,575 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:17,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:35:17,746 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-09 00:35:17,785 [ scc.git] DEBUG Get sha1 of %s 2025-05-09 00:35:17,785 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:35:17,787 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-09 00:35:17,825 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-09 00:35:17,829 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6fc595fb10> has no local changes 2025-05-09 00:35:17,829 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#400 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/400/)' 2025-05-09 00:35:17,835 [ scc.git] DEBUG [detached HEAD 0feefc4] merge master -Dorg -Ssuccess-only 2025-05-09 00:35:17,836 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-09 00:35:17,836 [ scc.repo] DEBUG ## PRs found: 2025-05-09 00:35:17,998 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:18,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-05-09 00:35:18,712 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:18,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/617 HTTP/1.1" 200 None 2025-05-09 00:35:19,221 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:19,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/616 HTTP/1.1" 200 None 2025-05-09 00:35:19,752 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:20,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-05-09 00:35:20,259 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:20,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-09 00:35:20,768 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:20,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-09 00:35:21,250 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:21,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-05-09 00:35:21,752 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:21,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/c6401a8d78f907d300ef6a6bb673efa86374ecc4?per_page=1 HTTP/1.1" 200 None 2025-05-09 00:35:22,209 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:22,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-05-09 00:35:22,693 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:22,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/status HTTP/1.1" 200 None 2025-05-09 00:35:22,936 [ scc.repo] DEBUG - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-05-09 00:35:23,186 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:23,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614 HTTP/1.1" 200 None 2025-05-09 00:35:23,661 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:23,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614/comments HTTP/1.1" 200 None 2025-05-09 00:35:24,119 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:24,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-05-09 00:35:24,630 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:24,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-09 00:35:25,117 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:25,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-09 00:35:25,660 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:25,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-05-09 00:35:26,205 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:26,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/da14d11b161eb8aa90a6e4729758ea504d5914e3?per_page=1 HTTP/1.1" 200 None 2025-05-09 00:35:26,637 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:26,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-05-09 00:35:27,088 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:27,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/status HTTP/1.1" 200 None 2025-05-09 00:35:27,286 [ scc.repo] DEBUG - PR 614 sbesson 'CodeQL workflow updates' 2025-05-09 00:35:27,537 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:28,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None 2025-05-09 00:35:28,324 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:28,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None 2025-05-09 00:35:28,825 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:29,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-05-09 00:35:29,331 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:29,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-09 00:35:29,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:30,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-09 00:35:30,367 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:30,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-05-09 00:35:30,891 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:31,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/a8c190ba1c823672143ab90d77020d652e2c084d?per_page=1 HTTP/1.1" 200 None 2025-05-09 00:35:31,362 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:31,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-05-09 00:35:31,823 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:32,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/status HTTP/1.1" 200 None 2025-05-09 00:35:32,061 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display' 2025-05-09 00:35:32,311 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:32,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None 2025-05-09 00:35:32,807 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:33,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None 2025-05-09 00:35:33,284 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:33,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-05-09 00:35:33,789 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:34,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-09 00:35:34,287 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:34,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-09 00:35:34,772 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:35,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-05-09 00:35:35,313 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:35,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None 2025-05-09 00:35:35,796 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:36,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-05-09 00:35:36,343 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:36,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None 2025-05-09 00:35:36,527 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-05-09 00:35:36,778 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:37,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/606 HTTP/1.1" 200 None 2025-05-09 00:35:37,256 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:37,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/606/comments HTTP/1.1" 200 None 2025-05-09 00:35:37,737 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:38,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14 HTTP/1.1" 200 None 2025-05-09 00:35:38,253 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:38,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-09 00:35:38,781 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:39,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-09 00:35:39,258 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:39,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14 HTTP/1.1" 200 None 2025-05-09 00:35:39,756 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:40,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14?per_page=1 HTTP/1.1" 200 None 2025-05-09 00:35:40,267 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:40,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14 HTTP/1.1" 200 None 2025-05-09 00:35:40,792 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:41,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14/status HTTP/1.1" 200 None 2025-05-09 00:35:41,019 [ scc.repo] DEBUG - PR 606 knabar 'Fix issues related to images with very high channel count' 2025-05-09 00:35:41,270 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:41,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-05-09 00:35:41,754 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:42,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2025-05-09 00:35:42,282 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:42,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-05-09 00:35:42,825 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:43,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-09 00:35:43,319 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:43,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-09 00:35:43,837 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:44,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-05-09 00:35:44,329 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:44,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-05-09 00:35:44,785 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:45,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-05-09 00:35:45,275 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:45,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-05-09 00:35:45,475 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-05-09 00:35:45,726 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:45,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-05-09 00:35:46,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:46,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-05-09 00:35:46,750 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:47,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-09 00:35:47,320 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:47,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-09 00:35:47,810 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:48,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-05-09 00:35:48,310 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:48,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-05-09 00:35:48,754 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:48,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-05-09 00:35:49,212 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:49,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-05-09 00:35:49,414 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2025-05-09 00:35:49,665 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:49,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-05-09 00:35:50,149 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:50,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-05-09 00:35:50,620 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:50,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-05-09 00:35:51,175 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:51,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-09 00:35:51,647 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:51,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-09 00:35:52,155 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:52,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-05-09 00:35:52,719 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:52,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-05-09 00:35:53,187 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:53,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-05-09 00:35:53,688 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:53,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-05-09 00:35:53,898 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-05-09 00:35:54,149 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:54,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-05-09 00:35:54,621 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:54,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-05-09 00:35:55,082 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:55,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-05-09 00:35:55,599 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:55,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-09 00:35:56,089 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:56,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-09 00:35:56,598 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:56,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-05-09 00:35:57,062 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:57,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-05-09 00:35:57,510 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:57,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-05-09 00:35:57,967 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:58,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-05-09 00:35:58,158 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-05-09 00:35:58,409 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:58,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-05-09 00:35:58,889 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:59,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-05-09 00:35:59,389 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:35:59,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-05-09 00:35:59,885 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:00,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-05-09 00:36:00,370 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:00,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-05-09 00:36:00,934 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:01,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-09 00:36:01,394 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:01,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-05-09 00:36:01,898 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:02,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2 2025-05-09 00:36:02,068 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-05-09 00:36:02,319 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:02,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-05-09 00:36:02,822 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:03,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-05-09 00:36:03,310 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:03,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-05-09 00:36:03,816 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:04,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-09 00:36:04,283 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:04,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-05-09 00:36:04,796 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:05,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2 2025-05-09 00:36:05,008 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-05-09 00:36:05,259 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:05,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-05-09 00:36:05,750 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:05,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-05-09 00:36:06,237 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:06,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-05-09 00:36:06,758 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:06,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-09 00:36:07,245 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:07,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-09 00:36:07,533 [ scc.repo] DEBUG ## Branches found: 2025-05-09 00:36:07,533 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-05-09 00:36:07,534 [ scc.git] DEBUG Get sha1 of %s 2025-05-09 00:36:07,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:36:07,536 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-09 00:36:07,539 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-09 00:36:07,539 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-09 00:36:07,543 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-09 00:36:07,546 [ scc.git] DEBUG Already up to date. 2025-05-09 00:36:07,546 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-05-09 00:36:07,879 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-09 00:36:07,879 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-05-09 00:36:07,884 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-05-09 00:36:08,166 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-09 00:36:08,166 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-05-09 00:36:08,170 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-05-09 00:36:08,464 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-09 00:36:08,464 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-05-09 00:36:08,468 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-05-09 00:36:08,734 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-09 00:36:08,735 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-05-09 00:36:08,739 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-05-09 00:36:09,043 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-09 00:36:09,043 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-05-09 00:36:09,047 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-05-09 00:36:09,324 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-09 00:36:09,324 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-05-09 00:36:09,328 [ scc.git] DEBUG Calling 'git fetch origin pull/606/head' 2025-05-09 00:36:09,587 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-09 00:36:09,588 [ scc.git] DEBUG * branch refs/pull/606/head -> FETCH_HEAD 2025-05-09 00:36:09,592 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-05-09 00:36:09,886 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-09 00:36:09,886 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-05-09 00:36:09,890 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head' 2025-05-09 00:36:10,181 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-09 00:36:10,181 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD 2025-05-09 00:36:10,186 [ scc.git] DEBUG Calling 'git fetch origin pull/614/head' 2025-05-09 00:36:10,445 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-09 00:36:10,445 [ scc.git] DEBUG * branch refs/pull/614/head -> FETCH_HEAD 2025-05-09 00:36:10,450 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head' 2025-05-09 00:36:10,724 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-09 00:36:10,724 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD 2025-05-09 00:36:10,729 [ scc.git] DEBUG ## Unique users: [] 2025-05-09 00:36:10,729 [ scc.git] DEBUG Get sha1 of %s 2025-05-09 00:36:10,729 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:36:10,731 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-05-09 00:36:10,739 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:36:10,741 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-05-09 00:36:10,759 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-05-09 00:36:10,759 [ scc.git] DEBUG Auto-merging setup.py 2025-05-09 00:36:10,761 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-09 00:36:10,765 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-05-09 00:36:10,765 [ scc.git] DEBUG setup.py | 1 + 2025-05-09 00:36:10,765 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-05-09 00:36:10,766 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:10,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:36:10,944 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-05-09 00:36:10,952 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:36:10,954 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-05-09 00:36:10,976 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-05-09 00:36:10,977 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-05-09 00:36:10,978 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-09 00:36:10,982 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-05-09 00:36:10,982 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-05-09 00:36:10,982 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-05-09 00:36:11,195 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:11,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:36:11,362 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-05-09 00:36:11,370 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:36:11,372 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-05-09 00:36:11,392 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-09 00:36:11,396 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-05-09 00:36:11,396 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-05-09 00:36:11,613 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:11,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:36:11,788 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-05-09 00:36:11,796 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:36:11,798 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-05-09 00:36:11,817 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-09 00:36:11,821 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-05-09 00:36:11,821 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-05-09 00:36:12,039 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:12,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:36:12,234 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-05-09 00:36:12,241 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:36:12,244 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-05-09 00:36:12,265 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-09 00:36:12,270 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-05-09 00:36:12,270 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-05-09 00:36:12,270 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-05-09 00:36:12,270 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-05-09 00:36:12,270 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-05-09 00:36:12,270 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-05-09 00:36:12,270 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-05-09 00:36:12,270 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-05-09 00:36:12,270 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-05-09 00:36:12,270 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-05-09 00:36:12,270 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-05-09 00:36:12,270 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-05-09 00:36:12,484 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:12,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:36:12,653 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-05-09 00:36:12,661 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:36:12,663 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-05-09 00:36:12,689 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-05-09 00:36:12,691 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-09 00:36:12,697 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-05-09 00:36:12,697 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-05-09 00:36:12,697 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-05-09 00:36:12,697 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-05-09 00:36:12,904 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:13,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:36:13,055 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14' 2025-05-09 00:36:13,063 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:36:13,065 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 606 (Fix issues related to images with very high channel count) 4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14' 2025-05-09 00:36:13,086 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-09 00:36:13,092 [ scc.git] DEBUG .../static/webgateway/js/ome.viewport.js | 17 ++++++++++-- 2025-05-09 00:36:13,092 [ scc.git] DEBUG omeroweb/webgateway/views.py | 32 ++++++++++++---------- 2025-05-09 00:36:13,092 [ scc.git] DEBUG 2 files changed, 32 insertions(+), 17 deletions(-) 2025-05-09 00:36:13,305 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:13,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:36:13,476 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-05-09 00:36:13,485 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:36:13,488 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-05-09 00:36:13,509 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-09 00:36:13,513 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++ 2025-05-09 00:36:13,513 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++---------- 2025-05-09 00:36:13,513 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-) 2025-05-09 00:36:13,727 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:13,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:36:13,916 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a8c190ba1c823672143ab90d77020d652e2c084d' 2025-05-09 00:36:13,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:36:13,927 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) a8c190ba1c823672143ab90d77020d652e2c084d' 2025-05-09 00:36:13,949 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-09 00:36:13,953 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 42 ++++++++++++++++------ 2025-05-09 00:36:13,953 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 38 ++++++++++++++------ 2025-05-09 00:36:13,953 [ scc.git] DEBUG 2 files changed, 60 insertions(+), 20 deletions(-) 2025-05-09 00:36:14,167 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:14,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:36:14,331 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-05-09 00:36:14,340 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:36:14,342 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 614 (CodeQL workflow updates) da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-05-09 00:36:14,363 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-09 00:36:14,366 [ scc.git] DEBUG .github/workflows/codeql-analysis.yml | 55 +++++++---------------------------- 2025-05-09 00:36:14,366 [ scc.git] DEBUG 1 file changed, 11 insertions(+), 44 deletions(-) 2025-05-09 00:36:14,582 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:14,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:36:14,751 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c6401a8d78f907d300ef6a6bb673efa86374ecc4' 2025-05-09 00:36:14,761 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:36:14,763 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Use the release/v1 branch for the PyPA action publishing to PyPI) c6401a8d78f907d300ef6a6bb673efa86374ecc4' 2025-05-09 00:36:14,782 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-09 00:36:14,785 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-05-09 00:36:14,785 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-05-09 00:36:15,002 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:15,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:36:15,169 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-09 00:36:15,209 [ scc.git] DEBUG Get sha1 of %s 2025-05-09 00:36:15,209 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-09 00:36:15,211 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-09 00:36:15,248 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-09 00:36:15,256 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6fc5698790> has no local changes 2025-05-09 00:36:15,256 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 606 knabar 'Fix issues related to images with very high channel count' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 614 sbesson 'CodeQL workflow updates' - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-python-superbuild-push#400 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/400/)' 2025-05-09 00:36:15,265 [ scc.git] DEBUG [detached HEAD 2599887d0] merge master -Dorg -Ssuccess-only 2025-05-09 00:36:15,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-09 00:36:15,265 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-09 00:36:15,312 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-05-09 00:36:15,420 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:15,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:36:15,590 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-05-09 00:36:15,834 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:16,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:36:16,018 [ scc.config] DEBUG Found submodule.omero-py.url 2025-05-09 00:36:16,262 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:16,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:36:16,439 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-05-09 00:36:16,684 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:16,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:36:16,846 [ scc.config] DEBUG Found submodule.omero-web.url 2025-05-09 00:36:17,091 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-09 00:36:17,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-09 00:36:17,264 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-09 00:36:17,291 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6fc66b7190> has local changes 2025-05-09 00:36:17,291 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 606 knabar 'Fix issues related to images with very high channel count' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 614 sbesson 'CodeQL workflow updates' - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-python-superbuild-push#400 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/400/)' 2025-05-09 00:36:17,299 [ scc.git] DEBUG [detached HEAD 98c51e6] merge master -Dorg -Ssuccess-only 2025-05-09 00:36:17,299 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-05-09 00:36:17,299 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-05-09 00:36:17,299 [ scc.merge] INFO Already up to date. 2025-05-09 00:36:17,299 [ scc.merge] INFO 2025-05-09 00:36:17,299 [ scc.merge] INFO 2025-05-09 00:36:17,299 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-05-09 00:36:17,299 [ scc.merge] INFO Already up to date. 2025-05-09 00:36:17,299 [ scc.merge] INFO 2025-05-09 00:36:17,300 [ scc.merge] INFO Merged PRs: 2025-05-09 00:36:17,300 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-05-09 00:36:17,300 [ scc.merge] INFO 2025-05-09 00:36:17,300 [ scc.merge] INFO Repository: ome/omero-marshal 2025-05-09 00:36:17,300 [ scc.merge] INFO Excluded PRs: 2025-05-09 00:36:17,300 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-05-09 00:36:17,300 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-05-09 00:36:17,300 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-05-09 00:36:17,300 [ scc.merge] INFO Already up to date. 2025-05-09 00:36:17,300 [ scc.merge] INFO 2025-05-09 00:36:17,300 [ scc.merge] INFO Merged PRs: 2025-05-09 00:36:17,300 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-05-09 00:36:17,300 [ scc.merge] INFO 2025-05-09 00:36:17,300 [ scc.merge] INFO Repository: ome/omero-py 2025-05-09 00:36:17,300 [ scc.merge] INFO Excluded PRs: 2025-05-09 00:36:17,300 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) 2025-05-09 00:36:17,300 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric) 2025-05-09 00:36:17,300 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) 2025-05-09 00:36:17,300 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-05-09 00:36:17,300 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) 2025-05-09 00:36:17,300 [ scc.merge] INFO Already up to date. 2025-05-09 00:36:17,300 [ scc.merge] INFO 2025-05-09 00:36:17,300 [ scc.merge] INFO Merged PRs: 2025-05-09 00:36:17,300 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-05-09 00:36:17,300 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-05-09 00:36:17,300 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-05-09 00:36:17,300 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-05-09 00:36:17,300 [ scc.merge] INFO - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' 2025-05-09 00:36:17,300 [ scc.merge] INFO 2025-05-09 00:36:17,300 [ scc.merge] INFO Repository: ome/omero-scripts 2025-05-09 00:36:17,300 [ scc.merge] INFO Excluded PRs: 2025-05-09 00:36:17,300 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-05-09 00:36:17,300 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-05-09 00:36:17,300 [ scc.merge] INFO Already up to date. 2025-05-09 00:36:17,300 [ scc.merge] INFO 2025-05-09 00:36:17,300 [ scc.merge] INFO Merged PRs: 2025-05-09 00:36:17,300 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-05-09 00:36:17,300 [ scc.merge] INFO 2025-05-09 00:36:17,301 [ scc.merge] INFO Conflicting PRs (not included): 2025-05-09 00:36:17,301 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-05-09 00:36:17,301 [ scc.merge] INFO 2025-05-09 00:36:17,301 [ scc.merge] INFO Repository: ome/omero-web 2025-05-09 00:36:17,301 [ scc.merge] INFO Excluded PRs: 2025-05-09 00:36:17,301 [ scc.merge] INFO - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-05-09 00:36:17,301 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-05-09 00:36:17,301 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2025-05-09 00:36:17,301 [ scc.merge] INFO Already up to date. 2025-05-09 00:36:17,301 [ scc.merge] INFO 2025-05-09 00:36:17,301 [ scc.merge] INFO Merged PRs: 2025-05-09 00:36:17,301 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-05-09 00:36:17,301 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-05-09 00:36:17,301 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-05-09 00:36:17,301 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-05-09 00:36:17,301 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2025-05-09 00:36:17,301 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-05-09 00:36:17,301 [ scc.merge] INFO - PR 606 knabar 'Fix issues related to images with very high channel count' 2025-05-09 00:36:17,301 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-05-09 00:36:17,301 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2025-05-09 00:36:17,301 [ scc.merge] INFO - PR 614 sbesson 'CodeQL workflow updates' 2025-05-09 00:36:17,301 [ scc.merge] INFO - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-05-09 00:36:17,301 [ scc.merge] INFO 2025-05-09 00:36:17,301 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-05-09 00:36:17,301 [ scc.git] DEBUG Calling 'git remote' 2025-05-09 00:36:17,303 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-05-09 00:36:17,303 [ scc.git] DEBUG Calling 'git remote' 2025-05-09 00:36:17,305 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-09 00:36:17,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-05-09 00:36:17,306 [ scc.git] DEBUG Calling 'git remote' 2025-05-09 00:36:17,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-09 00:36:17,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-05-09 00:36:17,308 [ scc.git] DEBUG Calling 'git remote' 2025-05-09 00:36:17,310 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-09 00:36:17,310 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-05-09 00:36:17,310 [ scc.git] DEBUG Calling 'git remote' 2025-05-09 00:36:17,312 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-09 00:36:17,312 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-05-09 00:36:17,312 [ scc.git] DEBUG Calling 'git remote' 2025-05-09 00:36:17,314 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 6d44f66 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from e485be49 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 950b28b nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 4b979f847 nothing to commit, working tree clean HEAD detached from 155f8de nothing to commit, working tree clean 2025-05-09 00:36:46,144 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS