![[Jenkins]](/jenkins/static/eb00aee0/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 480 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 155f8de84051621b91200b6b3617c057b622fad4 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 155f8de84051621b91200b6b3617c057b622fad4 # timeout=10 Commit message: "Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4" > git rev-list --no-walk 155f8de84051621b91200b6b3617c057b622fad4 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 430 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.1.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.1.1 WARNING: There was an error checking the latest version of pip. + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.6.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.10-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.13.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.3-cp39-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.12 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting pycparser (from cffi>=1.12->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.4.26-py3-none-any.whl.metadata (2.5 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached PyGithub-2.6.1-py3-none-any.whl (410 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-44.0.3-cp39-abi3-manylinux_2_34_x86_64.whl (4.2 MB) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (147 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.4.26-py3-none-any.whl (159 kB) Using cached typing_extensions-4.13.2-py3-none-any.whl (45 kB) Using cached Deprecated-1.2.18-py2.py3-none-any.whl (10.0 kB) Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (83 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Using cached ruamel.yaml-0.18.10-py3-none-any.whl (117 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.18 PyGithub-2.6.1 PyYAML-6.0.2 certifi-2025.4.26 cffi-1.17.1 charset-normalizer-3.4.2 cryptography-44.0.3 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.10 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.13.2 urllib3-1.26.20 wrapt-1.17.2 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-05-16 01:01:59,897 [ scc.config] DEBUG Found github.token 2025-05-16 01:01:59,899 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:00,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:02:00,321 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:00,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:02:00,741 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:00,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-05-16 01:02:00,911 [ scc.gh] DEBUG 4171 remaining from 5000 (Reset at 01:05 2025-05-16 01:02:00,912 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-16 01:02:00,915 [ scc.git] DEBUG Check current status 2025-05-16 01:02:00,915 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-16 01:02:00,917 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-05-16 01:02:00,918 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-16 01:02:01,005 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-05-16 01:02:01,345 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-05-16 01:02:04,346 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-05-16 01:02:04,352 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-05-16 01:02:04,357 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-05-16 01:02:04,360 [ scc.config] DEBUG Found remote.origin.url 2025-05-16 01:02:04,361 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:04,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-05-16 01:02:04,889 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:05,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-16 01:02:05,397 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:05,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-16 01:02:05,842 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:06,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-16 01:02:06,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:06,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-16 01:02:06,449 [ scc.git] DEBUG Resetting... 2025-05-16 01:02:06,449 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-05-16 01:02:06,454 [ scc.git] DEBUG HEAD is now at 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-05-16 01:02:06,455 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-05-16 01:02:06,513 [ scc.git] DEBUG Check current status 2025-05-16 01:02:06,513 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-16 01:02:06,515 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-05-16 01:02:06,516 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-16 01:02:06,562 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-05-16 01:02:06,566 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-05-16 01:02:06,575 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-05-16 01:02:06,581 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-05-16 01:02:06,585 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-05-16 01:02:06,586 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-05-16 01:02:06,586 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-05-16 01:02:06,586 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-05-16 01:02:06,586 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-05-16 01:02:06,586 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-05-16 01:02:06,586 [ scc.repo] DEBUG ## PRs found: 2025-05-16 01:02:06,700 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:06,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-05-16 01:02:06,904 [ scc.repo] DEBUG ## Branches found: 2025-05-16 01:02:06,904 [ scc.git] DEBUG Get sha1 of %s 2025-05-16 01:02:06,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:02:06,907 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-16 01:02:06,910 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-16 01:02:06,910 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-16 01:02:06,913 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-16 01:02:06,916 [ scc.git] DEBUG Already up to date. 2025-05-16 01:02:06,916 [ scc.git] DEBUG ## Unique users: [] 2025-05-16 01:02:06,916 [ scc.git] DEBUG Get sha1 of %s 2025-05-16 01:02:06,916 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:02:06,918 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-16 01:02:06,963 [ scc.git] DEBUG Get sha1 of %s 2025-05-16 01:02:06,963 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:02:06,965 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-16 01:02:07,575 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9829e3a4d0> has no local changes 2025-05-16 01:02:07,575 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#409 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/409/)' 2025-05-16 01:02:07,604 [ scc.git] DEBUG [detached HEAD cd1aa7e] merge master -Dorg -Snone 2025-05-16 01:02:07,605 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-05-16 01:02:07,605 [ scc.merge] INFO Already up to date. 2025-05-16 01:02:07,605 [ scc.merge] INFO 2025-05-16 01:02:07,605 [ scc.merge] INFO 2025-05-16 01:02:07,605 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-05-16 01:02:07,605 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-05-16 01:02:09,791 [ scc.config] DEBUG Found github.token 2025-05-16 01:02:09,793 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:09,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:02:10,205 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:10,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:02:10,630 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:10,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-05-16 01:02:10,800 [ scc.gh] DEBUG 4163 remaining from 5000 (Reset at 01:05 2025-05-16 01:02:10,801 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-16 01:02:10,804 [ scc.git] DEBUG Check current status 2025-05-16 01:02:10,804 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-16 01:02:10,807 [ scc.git] DEBUG cd1aa7e merge master -Dorg -Snone 2025-05-16 01:02:10,807 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-16 01:02:10,853 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-05-16 01:02:10,856 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-05-16 01:02:10,866 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-05-16 01:02:10,870 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-05-16 01:02:10,876 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-05-16 01:02:10,879 [ scc.config] DEBUG Found remote.origin.url 2025-05-16 01:02:10,879 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-05-16 01:02:10,880 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-05-16 01:02:11,053 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:11,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-05-16 01:02:11,597 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:11,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-16 01:02:12,099 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:12,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-16 01:02:12,534 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:12,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-16 01:02:12,975 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:13,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-16 01:02:13,205 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-16 01:02:13,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-05-16 01:02:13,254 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-16 01:02:13,256 [ scc.git] DEBUG Check current status 2025-05-16 01:02:13,256 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-16 01:02:13,259 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-05-16 01:02:13,259 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-16 01:02:13,302 [ scc.config] DEBUG Found remote.origin.url 2025-05-16 01:02:13,455 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:13,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-05-16 01:02:13,962 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:14,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-16 01:02:14,470 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:14,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-16 01:02:14,922 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:15,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-16 01:02:15,362 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:15,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-16 01:02:15,530 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-16 01:02:15,574 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-16 01:02:15,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-05-16 01:02:15,575 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-16 01:02:15,577 [ scc.git] DEBUG Check current status 2025-05-16 01:02:15,577 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-16 01:02:15,580 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build 2025-05-16 01:02:15,580 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-16 01:02:15,624 [ scc.config] DEBUG Found remote.origin.url 2025-05-16 01:02:15,781 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:16,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-05-16 01:02:16,318 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:16,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-16 01:02:16,807 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:16,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-16 01:02:17,233 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:17,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-16 01:02:17,709 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:17,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-16 01:02:17,877 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-16 01:02:17,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-16 01:02:17,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-05-16 01:02:17,921 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-16 01:02:17,923 [ scc.git] DEBUG Check current status 2025-05-16 01:02:17,923 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-16 01:02:17,929 [ scc.git] DEBUG e485be49 Merge pull request #427 from Rdornier/mirror-java-download 2025-05-16 01:02:17,930 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-16 01:02:17,976 [ scc.config] DEBUG Found remote.origin.url 2025-05-16 01:02:18,127 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:18,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-05-16 01:02:18,648 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:18,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-16 01:02:19,132 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:19,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-16 01:02:19,559 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:19,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-16 01:02:19,994 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:20,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-16 01:02:20,173 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-16 01:02:20,214 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-16 01:02:20,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-05-16 01:02:20,215 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-16 01:02:20,217 [ scc.git] DEBUG Check current status 2025-05-16 01:02:20,217 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-16 01:02:20,220 [ scc.git] DEBUG 950b28b Merge pull request #225 from will-moore/test_fixes 2025-05-16 01:02:20,220 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-16 01:02:20,263 [ scc.config] DEBUG Found remote.origin.url 2025-05-16 01:02:20,264 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-05-16 01:02:20,424 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:20,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-05-16 01:02:20,942 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:21,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-16 01:02:21,448 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:21,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-16 01:02:21,893 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:22,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-16 01:02:22,330 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:22,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-16 01:02:22,512 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-16 01:02:22,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-16 01:02:22,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-05-16 01:02:22,556 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-16 01:02:22,558 [ scc.git] DEBUG Check current status 2025-05-16 01:02:22,558 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-16 01:02:22,613 [ scc.git] DEBUG 4b979f847 Bump version: 5.29.0 → 5.29.1.dev0 2025-05-16 01:02:22,614 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-16 01:02:22,659 [ scc.config] DEBUG Found remote.origin.url 2025-05-16 01:02:22,763 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:23,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-05-16 01:02:23,301 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:23,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-16 01:02:23,810 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:23,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-16 01:02:24,245 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:24,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-16 01:02:24,711 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:24,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-16 01:02:24,890 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-16 01:02:24,932 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-16 01:02:24,933 [ scc.git] DEBUG Resetting... 2025-05-16 01:02:24,933 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-05-16 01:02:24,938 [ scc.git] DEBUG HEAD is now at cd1aa7e merge master -Dorg -Snone 2025-05-16 01:02:24,938 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-05-16 01:02:24,995 [ scc.git] DEBUG Check current status 2025-05-16 01:02:24,995 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-16 01:02:24,997 [ scc.git] DEBUG cd1aa7e merge master -Dorg -Snone 2025-05-16 01:02:24,998 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-16 01:02:25,045 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-05-16 01:02:25,049 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-05-16 01:02:25,058 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-05-16 01:02:25,063 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-05-16 01:02:25,068 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-05-16 01:02:25,069 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-05-16 01:02:25,070 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-05-16 01:02:25,070 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-05-16 01:02:25,070 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-05-16 01:02:25,070 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-05-16 01:02:25,070 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-05-16 01:02:25,070 [ scc.repo] DEBUG ## PRs found: 2025-05-16 01:02:25,141 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:25,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-05-16 01:02:25,384 [ scc.repo] DEBUG ## Branches found: 2025-05-16 01:02:25,384 [ scc.git] DEBUG Get sha1 of %s 2025-05-16 01:02:25,384 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:02:25,387 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-16 01:02:25,389 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-16 01:02:25,389 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-16 01:02:25,392 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-16 01:02:25,395 [ scc.git] DEBUG Already up to date. 2025-05-16 01:02:25,395 [ scc.git] DEBUG ## Unique users: [] 2025-05-16 01:02:25,395 [ scc.git] DEBUG Get sha1 of %s 2025-05-16 01:02:25,395 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:02:25,397 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-16 01:02:25,444 [ scc.git] DEBUG Get sha1 of %s 2025-05-16 01:02:25,444 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:02:25,447 [ scc.repo] DEBUG ## PRs found: 2025-05-16 01:02:25,635 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:25,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-05-16 01:02:26,187 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:26,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-05-16 01:02:26,680 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:26,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-05-16 01:02:27,187 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:27,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-05-16 01:02:27,739 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:27,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-16 01:02:28,227 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:28,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-05-16 01:02:28,692 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:28,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-05-16 01:02:28,882 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-05-16 01:02:28,883 [ scc.repo] DEBUG ## Branches found: 2025-05-16 01:02:28,883 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-05-16 01:02:28,883 [ scc.git] DEBUG Get sha1 of %s 2025-05-16 01:02:28,883 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:02:28,886 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-16 01:02:28,889 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-16 01:02:28,889 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-16 01:02:28,892 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-16 01:02:28,895 [ scc.git] DEBUG Already up to date. 2025-05-16 01:02:28,895 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-05-16 01:02:29,264 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-05-16 01:02:29,264 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-05-16 01:02:29,269 [ scc.git] DEBUG ## Unique users: [] 2025-05-16 01:02:29,270 [ scc.git] DEBUG Get sha1 of %s 2025-05-16 01:02:29,270 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:02:29,272 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-05-16 01:02:29,276 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:02:29,279 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-05-16 01:02:29,598 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-05-16 01:02:29,598 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-05-16 01:02:29,598 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-05-16 01:02:29,598 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-05-16 01:02:29,598 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-05-16 01:02:29,598 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-05-16 01:02:29,598 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-05-16 01:02:29,598 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-05-16 01:02:29,598 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-05-16 01:02:29,600 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-16 01:02:29,604 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-05-16 01:02:29,605 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-05-16 01:02:29,605 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-05-16 01:02:29,605 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-05-16 01:02:29,605 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-05-16 01:02:29,605 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-05-16 01:02:29,605 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-05-16 01:02:29,605 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-05-16 01:02:29,605 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-05-16 01:02:29,605 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-05-16 01:02:29,606 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:29,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:02:29,778 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-16 01:02:29,822 [ scc.git] DEBUG Get sha1 of %s 2025-05-16 01:02:29,822 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:02:29,825 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-16 01:02:29,867 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-16 01:02:29,871 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1d34809c90> has no local changes 2025-05-16 01:02:29,872 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#409 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/409/)' 2025-05-16 01:02:29,879 [ scc.git] DEBUG [detached HEAD 8b0c0a8] merge master -Dorg -Ssuccess-only 2025-05-16 01:02:29,880 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-16 01:02:29,881 [ scc.repo] DEBUG ## PRs found: 2025-05-16 01:02:30,029 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:30,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-05-16 01:02:30,612 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:30,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-05-16 01:02:31,082 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:31,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2025-05-16 01:02:31,565 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:31,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-05-16 01:02:32,068 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:32,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-05-16 01:02:32,539 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:32,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-05-16 01:02:33,065 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:33,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-16 01:02:33,517 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:33,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-05-16 01:02:34,109 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:34,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-05-16 01:02:34,287 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-05-16 01:02:34,539 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:34,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-05-16 01:02:35,014 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:35,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-05-16 01:02:35,516 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:35,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-05-16 01:02:36,014 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:36,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-05-16 01:02:36,254 [ scc.repo] DEBUG ## Branches found: 2025-05-16 01:02:36,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-05-16 01:02:36,254 [ scc.git] DEBUG Get sha1 of %s 2025-05-16 01:02:36,254 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:02:36,257 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-16 01:02:36,259 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-16 01:02:36,260 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-16 01:02:36,263 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-16 01:02:36,266 [ scc.git] DEBUG Already up to date. 2025-05-16 01:02:36,266 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-05-16 01:02:36,696 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-05-16 01:02:36,696 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-05-16 01:02:36,701 [ scc.git] DEBUG ## Unique users: [] 2025-05-16 01:02:36,701 [ scc.git] DEBUG Get sha1 of %s 2025-05-16 01:02:36,701 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:02:36,704 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-05-16 01:02:36,708 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:02:36,710 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-05-16 01:02:36,724 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-05-16 01:02:36,726 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-16 01:02:36,729 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-05-16 01:02:36,729 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-05-16 01:02:36,729 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-05-16 01:02:36,730 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:36,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:02:36,900 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-16 01:02:36,944 [ scc.git] DEBUG Get sha1 of %s 2025-05-16 01:02:36,944 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:02:36,946 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-16 01:02:36,986 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-16 01:02:36,990 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1d34861b90> has no local changes 2025-05-16 01:02:36,990 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#409 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/409/)' 2025-05-16 01:02:36,997 [ scc.git] DEBUG [detached HEAD 2d9ccea] merge master -Dorg -Ssuccess-only 2025-05-16 01:02:36,997 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-16 01:02:36,997 [ scc.repo] DEBUG ## PRs found: 2025-05-16 01:02:37,151 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:37,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-05-16 01:02:37,843 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:38,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None 2025-05-16 01:02:38,376 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:38,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/453 HTTP/1.1" 200 None 2025-05-16 01:02:38,888 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:39,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/453/comments HTTP/1.1" 200 None 2025-05-16 01:02:39,407 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:39,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-05-16 01:02:39,957 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:40,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-16 01:02:40,443 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:40,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-16 01:02:40,936 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:41,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-05-16 01:02:41,449 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:41,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ff9ad445b6af7725ab17a39185630b8919e42bab?per_page=1 HTTP/1.1" 200 None 2025-05-16 01:02:41,907 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:42,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-05-16 01:02:42,460 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:42,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/status HTTP/1.1" 200 None 2025-05-16 01:02:42,657 [ scc.repo] DEBUG - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' 2025-05-16 01:02:42,908 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:43,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None 2025-05-16 01:02:43,409 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:43,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450/comments HTTP/1.1" 200 None 2025-05-16 01:02:43,893 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:44,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None 2025-05-16 01:02:44,397 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:44,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None 2025-05-16 01:02:44,728 [ scc.repo] DEBUG # ... Exclude label: exclude 2025-05-16 01:02:44,979 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:45,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-05-16 01:02:45,514 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:45,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-05-16 01:02:45,998 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:46,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-05-16 01:02:46,555 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:46,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-16 01:02:47,100 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:47,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-16 01:02:47,612 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:47,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-05-16 01:02:48,088 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:48,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2025-05-16 01:02:48,515 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:48,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-05-16 01:02:49,027 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:49,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2025-05-16 01:02:49,206 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-05-16 01:02:49,457 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:49,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-05-16 01:02:49,941 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:50,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-05-16 01:02:50,428 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:50,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-05-16 01:02:50,978 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:51,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-16 01:02:51,481 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:51,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-16 01:02:51,965 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:52,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-05-16 01:02:52,446 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:52,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2025-05-16 01:02:52,948 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:53,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-05-16 01:02:53,464 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:53,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-16 01:02:53,953 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:54,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-05-16 01:02:54,519 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:54,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2025-05-16 01:02:54,706 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-05-16 01:02:54,958 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:55,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-05-16 01:02:55,432 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:55,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-05-16 01:02:55,932 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:56,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-05-16 01:02:56,438 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:56,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-16 01:02:56,966 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:57,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-05-16 01:02:57,494 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:57,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2 2025-05-16 01:02:57,693 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-05-16 01:02:57,944 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:58,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-05-16 01:02:58,418 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:58,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-05-16 01:02:58,930 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:59,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-05-16 01:02:59,441 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:02:59,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-05-16 01:02:59,974 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:00,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-05-16 01:03:00,508 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:00,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-16 01:03:00,970 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:01,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-05-16 01:03:01,425 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:01,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-05-16 01:03:01,617 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-05-16 01:03:01,619 [ scc.repo] DEBUG ## Branches found: 2025-05-16 01:03:01,619 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-05-16 01:03:01,619 [ scc.git] DEBUG Get sha1 of %s 2025-05-16 01:03:01,619 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:03:01,622 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-16 01:03:01,625 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-16 01:03:01,625 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-16 01:03:01,629 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-16 01:03:01,632 [ scc.git] DEBUG Already up to date. 2025-05-16 01:03:01,632 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-05-16 01:03:02,044 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-16 01:03:02,044 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-05-16 01:03:02,050 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-05-16 01:03:02,387 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-16 01:03:02,387 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-05-16 01:03:02,392 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-05-16 01:03:02,676 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-16 01:03:02,676 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-05-16 01:03:02,681 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-05-16 01:03:03,392 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-16 01:03:03,392 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-05-16 01:03:03,398 [ scc.git] DEBUG Calling 'git fetch origin pull/453/head' 2025-05-16 01:03:04,418 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-16 01:03:04,418 [ scc.git] DEBUG * branch refs/pull/453/head -> FETCH_HEAD 2025-05-16 01:03:04,423 [ scc.git] DEBUG ## Unique users: [] 2025-05-16 01:03:04,424 [ scc.git] DEBUG Get sha1 of %s 2025-05-16 01:03:04,424 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:03:04,426 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-05-16 01:03:04,439 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:03:04,442 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-05-16 01:03:04,651 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-05-16 01:03:04,651 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-05-16 01:03:04,653 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-16 01:03:04,658 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-05-16 01:03:04,658 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-05-16 01:03:04,658 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-05-16 01:03:04,660 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:04,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:03:04,827 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-05-16 01:03:04,840 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:03:04,843 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-05-16 01:03:04,918 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-16 01:03:04,922 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-05-16 01:03:04,922 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-05-16 01:03:04,922 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-05-16 01:03:04,922 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-05-16 01:03:04,922 [ scc.git] DEBUG create mode 100644 connect.py 2025-05-16 01:03:05,078 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:05,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:03:05,252 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-05-16 01:03:05,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:03:05,268 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-05-16 01:03:05,647 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-05-16 01:03:05,649 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-16 01:03:05,654 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-05-16 01:03:05,654 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-05-16 01:03:05,655 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:05,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:03:05,831 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-05-16 01:03:05,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:03:05,847 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-05-16 01:03:06,104 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-05-16 01:03:06,105 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-16 01:03:06,113 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-05-16 01:03:06,113 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-05-16 01:03:06,115 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:06,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:03:06,289 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ff9ad445b6af7725ab17a39185630b8919e42bab' 2025-05-16 01:03:06,303 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:03:06,305 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 453 (getObject() and getExternalInfo() load externalInfo) ff9ad445b6af7725ab17a39185630b8919e42bab' 2025-05-16 01:03:06,568 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-05-16 01:03:06,569 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-16 01:03:06,578 [ scc.git] DEBUG src/omero/gateway/__init__.py | 21 ++++++++++++++++++ 2025-05-16 01:03:06,579 [ scc.git] DEBUG src/omero/plugins/obj.py | 50 ++++++++++++++++++++++++++++++++++++++++++- 2025-05-16 01:03:06,579 [ scc.git] DEBUG 2 files changed, 70 insertions(+), 1 deletion(-) 2025-05-16 01:03:06,581 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:06,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:03:06,753 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-16 01:03:06,798 [ scc.git] DEBUG Get sha1 of %s 2025-05-16 01:03:06,799 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:03:06,801 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-16 01:03:06,845 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-16 01:03:06,853 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1d36fd1ad0> has no local changes 2025-05-16 01:03:06,853 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' Generated by OMERO-python-superbuild-push#409 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/409/)' 2025-05-16 01:03:06,866 [ scc.git] DEBUG [detached HEAD e19b659b] merge master -Dorg -Ssuccess-only 2025-05-16 01:03:06,867 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-16 01:03:06,867 [ scc.git] INFO Overriding base-branch from master to develop 2025-05-16 01:03:06,867 [ scc.repo] DEBUG ## PRs found: 2025-05-16 01:03:07,004 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:07,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-05-16 01:03:07,613 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:07,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-05-16 01:03:08,139 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:08,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-05-16 01:03:08,629 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:08,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-05-16 01:03:09,157 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:09,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-16 01:03:09,684 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:09,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-16 01:03:10,179 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:10,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-05-16 01:03:10,713 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:10,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-05-16 01:03:10,902 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-05-16 01:03:11,153 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:11,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-05-16 01:03:11,650 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:11,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-05-16 01:03:12,123 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:12,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-05-16 01:03:12,660 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:12,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-16 01:03:13,160 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:13,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-05-16 01:03:13,622 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:13,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-05-16 01:03:13,832 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-05-16 01:03:14,083 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:14,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-05-16 01:03:14,561 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:14,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-05-16 01:03:15,106 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:15,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-05-16 01:03:15,613 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:15,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-05-16 01:03:15,990 [ scc.repo] DEBUG ## Branches found: 2025-05-16 01:03:15,990 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-05-16 01:03:15,990 [ scc.git] DEBUG Get sha1 of %s 2025-05-16 01:03:15,990 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:03:15,993 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-05-16 01:03:15,996 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-16 01:03:15,996 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-05-16 01:03:15,999 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-05-16 01:03:16,003 [ scc.git] DEBUG Already up to date. 2025-05-16 01:03:16,003 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-05-16 01:03:16,829 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-05-16 01:03:16,829 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-05-16 01:03:16,834 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-05-16 01:03:17,451 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-05-16 01:03:17,451 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-05-16 01:03:17,456 [ scc.git] DEBUG ## Unique users: [] 2025-05-16 01:03:17,456 [ scc.git] DEBUG Get sha1 of %s 2025-05-16 01:03:17,456 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:03:17,459 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-05-16 01:03:17,465 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:03:17,467 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-05-16 01:03:17,639 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-05-16 01:03:17,640 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-05-16 01:03:17,640 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-05-16 01:03:17,643 [ scc.git] DEBUG Calling 'git reset --hard 950b28b31e228ae7b317cbd159235faf4023e4dc' 2025-05-16 01:03:17,647 [ scc.git] DEBUG HEAD is now at 950b28b Merge pull request #225 from will-moore/test_fixes 2025-05-16 01:03:17,648 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:17,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:03:17,808 [ scc.git] DEBUG Calling 'git merge-base 950b28b31e228ae7b317cbd159235faf4023e4dc 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-05-16 01:03:17,814 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..950b28b31e228ae7b317cbd159235faf4023e4dc' 2025-05-16 01:03:17,820 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#409](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/409/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/409/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-05-16 01:03:17,822 [ scc.config] DEBUG Found github.token 2025-05-16 01:03:17,822 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-05-16 01:03:17,822 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-05-16 01:03:17,827 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:03:17,830 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-05-16 01:03:17,848 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-16 01:03:17,852 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-05-16 01:03:17,852 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-05-16 01:03:18,059 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:18,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:03:18,335 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-16 01:03:18,377 [ scc.git] DEBUG Get sha1 of %s 2025-05-16 01:03:18,377 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:03:18,380 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-16 01:03:18,421 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-16 01:03:18,425 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1d34b3bd90> has no local changes 2025-05-16 01:03:18,425 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#409 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/409/)' 2025-05-16 01:03:18,431 [ scc.git] DEBUG [detached HEAD befc422] merge master -Dorg -Ssuccess-only 2025-05-16 01:03:18,432 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-16 01:03:18,432 [ scc.repo] DEBUG ## PRs found: 2025-05-16 01:03:18,587 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:19,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-05-16 01:03:19,313 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:19,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/617 HTTP/1.1" 200 None 2025-05-16 01:03:19,821 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:20,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/616 HTTP/1.1" 200 None 2025-05-16 01:03:20,319 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:20,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-05-16 01:03:20,870 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:21,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-16 01:03:21,356 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:21,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-16 01:03:21,856 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:22,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-05-16 01:03:22,370 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:22,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/c6401a8d78f907d300ef6a6bb673efa86374ecc4?per_page=1 HTTP/1.1" 200 None 2025-05-16 01:03:22,815 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:23,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-05-16 01:03:23,257 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:23,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/status HTTP/1.1" 200 None 2025-05-16 01:03:23,522 [ scc.repo] DEBUG - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-05-16 01:03:23,773 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:24,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614 HTTP/1.1" 200 None 2025-05-16 01:03:24,256 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:24,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614/comments HTTP/1.1" 200 None 2025-05-16 01:03:24,758 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:25,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-05-16 01:03:25,297 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:25,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-16 01:03:25,812 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:26,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-16 01:03:26,318 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:26,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-05-16 01:03:26,827 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:27,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/da14d11b161eb8aa90a6e4729758ea504d5914e3?per_page=1 HTTP/1.1" 200 None 2025-05-16 01:03:27,264 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:27,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-05-16 01:03:27,763 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:27,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/status HTTP/1.1" 200 None 2025-05-16 01:03:27,972 [ scc.repo] DEBUG - PR 614 sbesson 'CodeQL workflow updates' 2025-05-16 01:03:28,223 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:28,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None 2025-05-16 01:03:28,743 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:29,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None 2025-05-16 01:03:29,302 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:29,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-05-16 01:03:29,810 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:30,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-16 01:03:30,297 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:30,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-16 01:03:30,788 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:30,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-05-16 01:03:31,234 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:31,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/a8c190ba1c823672143ab90d77020d652e2c084d?per_page=1 HTTP/1.1" 200 None 2025-05-16 01:03:31,681 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:31,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-05-16 01:03:32,221 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:32,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/status HTTP/1.1" 200 None 2025-05-16 01:03:32,414 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display' 2025-05-16 01:03:32,665 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:32,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None 2025-05-16 01:03:33,169 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:33,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None 2025-05-16 01:03:33,648 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:33,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-05-16 01:03:34,169 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:34,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-16 01:03:34,679 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:34,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-16 01:03:35,204 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:35,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-05-16 01:03:35,674 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:35,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None 2025-05-16 01:03:36,129 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:36,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-05-16 01:03:36,625 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:36,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None 2025-05-16 01:03:36,810 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-05-16 01:03:37,061 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:37,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/606 HTTP/1.1" 200 None 2025-05-16 01:03:37,544 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:37,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/606/comments HTTP/1.1" 200 None 2025-05-16 01:03:38,026 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:38,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14 HTTP/1.1" 200 None 2025-05-16 01:03:38,544 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:38,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-16 01:03:39,058 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:39,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-16 01:03:39,561 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:39,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14 HTTP/1.1" 200 None 2025-05-16 01:03:40,024 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:40,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14?per_page=1 HTTP/1.1" 200 None 2025-05-16 01:03:40,462 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:40,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14 HTTP/1.1" 200 None 2025-05-16 01:03:40,974 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:41,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14/status HTTP/1.1" 200 None 2025-05-16 01:03:41,186 [ scc.repo] DEBUG - PR 606 knabar 'Fix issues related to images with very high channel count' 2025-05-16 01:03:41,437 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:41,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-05-16 01:03:41,927 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:42,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2025-05-16 01:03:42,432 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:42,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-05-16 01:03:42,967 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:43,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-16 01:03:43,446 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:43,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-16 01:03:43,944 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:44,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-05-16 01:03:44,504 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:44,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-05-16 01:03:44,986 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:45,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-05-16 01:03:45,519 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:45,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-05-16 01:03:45,713 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-05-16 01:03:45,963 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:46,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-05-16 01:03:46,457 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:46,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-05-16 01:03:46,965 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:47,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-16 01:03:47,477 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:47,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-16 01:03:47,985 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:48,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-05-16 01:03:48,442 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:48,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-05-16 01:03:48,893 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:49,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-05-16 01:03:49,349 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:49,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-05-16 01:03:49,568 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2025-05-16 01:03:49,819 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:50,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-05-16 01:03:50,310 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:50,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-05-16 01:03:50,795 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:51,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-05-16 01:03:51,336 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:51,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-16 01:03:51,856 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:52,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-16 01:03:52,400 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:52,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-05-16 01:03:52,903 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:53,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-05-16 01:03:53,360 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:53,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-05-16 01:03:53,828 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:54,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-05-16 01:03:54,057 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-05-16 01:03:54,308 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:54,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-05-16 01:03:54,791 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:55,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-05-16 01:03:55,278 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:55,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-05-16 01:03:55,778 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:56,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-16 01:03:56,288 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:56,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-16 01:03:56,933 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:57,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-05-16 01:03:57,457 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:57,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-05-16 01:03:57,897 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:58,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-05-16 01:03:58,357 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:58,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-05-16 01:03:58,576 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-05-16 01:03:58,827 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:59,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-05-16 01:03:59,357 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:03:59,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-05-16 01:03:59,865 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:00,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-05-16 01:04:00,385 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:00,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-05-16 01:04:00,871 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:01,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-05-16 01:04:01,411 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:01,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-16 01:04:01,887 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:02,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-05-16 01:04:02,410 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:02,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2 2025-05-16 01:04:02,582 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-05-16 01:04:02,833 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:03,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-05-16 01:04:03,360 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:03,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-05-16 01:04:03,886 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:04,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-05-16 01:04:04,401 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:04,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-16 01:04:04,873 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:05,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-05-16 01:04:05,379 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:05,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2 2025-05-16 01:04:05,574 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-05-16 01:04:05,825 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:06,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-05-16 01:04:06,323 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:06,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-05-16 01:04:06,820 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:07,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-05-16 01:04:07,366 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:07,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-16 01:04:07,959 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:08,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-16 01:04:08,243 [ scc.repo] DEBUG ## Branches found: 2025-05-16 01:04:08,243 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-05-16 01:04:08,244 [ scc.git] DEBUG Get sha1 of %s 2025-05-16 01:04:08,244 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:04:08,247 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-16 01:04:08,250 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-16 01:04:08,250 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-16 01:04:08,306 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-16 01:04:08,310 [ scc.git] DEBUG Already up to date. 2025-05-16 01:04:08,310 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-05-16 01:04:10,584 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-16 01:04:10,584 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-05-16 01:04:10,590 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-05-16 01:04:10,906 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-16 01:04:10,906 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-05-16 01:04:10,911 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-05-16 01:04:12,156 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-16 01:04:12,156 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-05-16 01:04:12,161 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-05-16 01:04:12,665 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-16 01:04:12,666 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-05-16 01:04:12,672 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-05-16 01:04:13,061 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-16 01:04:13,061 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-05-16 01:04:13,066 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-05-16 01:04:13,765 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-16 01:04:13,765 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-05-16 01:04:13,770 [ scc.git] DEBUG Calling 'git fetch origin pull/606/head' 2025-05-16 01:04:14,251 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-16 01:04:14,251 [ scc.git] DEBUG * branch refs/pull/606/head -> FETCH_HEAD 2025-05-16 01:04:14,256 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-05-16 01:04:14,592 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-16 01:04:14,592 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-05-16 01:04:14,597 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head' 2025-05-16 01:04:15,185 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-16 01:04:15,186 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD 2025-05-16 01:04:15,191 [ scc.git] DEBUG Calling 'git fetch origin pull/614/head' 2025-05-16 01:04:15,883 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-16 01:04:15,883 [ scc.git] DEBUG * branch refs/pull/614/head -> FETCH_HEAD 2025-05-16 01:04:15,889 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head' 2025-05-16 01:04:16,283 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-16 01:04:16,283 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD 2025-05-16 01:04:16,289 [ scc.git] DEBUG ## Unique users: [] 2025-05-16 01:04:16,289 [ scc.git] DEBUG Get sha1 of %s 2025-05-16 01:04:16,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:04:16,292 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-05-16 01:04:16,300 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:04:16,303 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-05-16 01:04:16,546 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-05-16 01:04:16,546 [ scc.git] DEBUG Auto-merging setup.py 2025-05-16 01:04:16,549 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-16 01:04:16,554 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-05-16 01:04:16,554 [ scc.git] DEBUG setup.py | 1 + 2025-05-16 01:04:16,554 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-05-16 01:04:16,556 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:16,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:04:16,714 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-05-16 01:04:16,723 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:04:16,726 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-05-16 01:04:16,959 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-05-16 01:04:16,959 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-05-16 01:04:16,961 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-16 01:04:16,966 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-05-16 01:04:16,966 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-05-16 01:04:16,966 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-05-16 01:04:16,968 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:17,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:04:17,142 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-05-16 01:04:17,152 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:04:17,156 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-05-16 01:04:17,254 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-16 01:04:17,259 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-05-16 01:04:17,259 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-05-16 01:04:17,393 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:17,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:04:17,556 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-05-16 01:04:17,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:04:17,568 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-05-16 01:04:17,780 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-16 01:04:17,784 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-05-16 01:04:17,784 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-05-16 01:04:17,807 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:17,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:04:17,971 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-05-16 01:04:17,980 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:04:17,982 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-05-16 01:04:18,064 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-16 01:04:18,070 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-05-16 01:04:18,070 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-05-16 01:04:18,071 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-05-16 01:04:18,071 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-05-16 01:04:18,071 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-05-16 01:04:18,071 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-05-16 01:04:18,071 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-05-16 01:04:18,071 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-05-16 01:04:18,071 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-05-16 01:04:18,071 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-05-16 01:04:18,071 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-05-16 01:04:18,071 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-05-16 01:04:18,222 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:18,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:04:18,394 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-05-16 01:04:18,404 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:04:18,406 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-05-16 01:04:18,583 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-05-16 01:04:18,584 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-16 01:04:18,595 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-05-16 01:04:18,595 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-05-16 01:04:18,596 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-05-16 01:04:18,596 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-05-16 01:04:18,645 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:18,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:04:18,819 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14' 2025-05-16 01:04:18,829 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:04:18,831 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 606 (Fix issues related to images with very high channel count) 4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14' 2025-05-16 01:04:19,184 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-16 01:04:19,191 [ scc.git] DEBUG .../static/webgateway/js/ome.viewport.js | 17 ++++++++++-- 2025-05-16 01:04:19,191 [ scc.git] DEBUG omeroweb/webgateway/views.py | 32 ++++++++++++---------- 2025-05-16 01:04:19,191 [ scc.git] DEBUG 2 files changed, 32 insertions(+), 17 deletions(-) 2025-05-16 01:04:19,192 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:19,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:04:19,380 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-05-16 01:04:19,390 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:04:19,392 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-05-16 01:04:19,483 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-16 01:04:19,488 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++ 2025-05-16 01:04:19,488 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++---------- 2025-05-16 01:04:19,488 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-) 2025-05-16 01:04:19,631 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:19,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:04:19,867 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a8c190ba1c823672143ab90d77020d652e2c084d' 2025-05-16 01:04:19,877 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:04:19,879 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) a8c190ba1c823672143ab90d77020d652e2c084d' 2025-05-16 01:04:20,042 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-16 01:04:20,047 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 42 ++++++++++++++++------ 2025-05-16 01:04:20,047 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 38 ++++++++++++++------ 2025-05-16 01:04:20,047 [ scc.git] DEBUG 2 files changed, 60 insertions(+), 20 deletions(-) 2025-05-16 01:04:20,118 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:20,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:04:20,286 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-05-16 01:04:20,296 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:04:20,298 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 614 (CodeQL workflow updates) da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-05-16 01:04:20,340 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-16 01:04:20,344 [ scc.git] DEBUG .github/workflows/codeql-analysis.yml | 55 +++++++---------------------------- 2025-05-16 01:04:20,344 [ scc.git] DEBUG 1 file changed, 11 insertions(+), 44 deletions(-) 2025-05-16 01:04:20,537 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:20,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:04:20,706 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c6401a8d78f907d300ef6a6bb673efa86374ecc4' 2025-05-16 01:04:20,718 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:04:20,720 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Use the release/v1 branch for the PyPA action publishing to PyPI) c6401a8d78f907d300ef6a6bb673efa86374ecc4' 2025-05-16 01:04:20,750 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-16 01:04:20,754 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-05-16 01:04:20,754 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-05-16 01:04:20,957 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:21,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:04:21,114 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-16 01:04:21,156 [ scc.git] DEBUG Get sha1 of %s 2025-05-16 01:04:21,156 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-16 01:04:21,158 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-16 01:04:21,198 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-16 01:04:21,206 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1d3702a690> has no local changes 2025-05-16 01:04:21,207 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 606 knabar 'Fix issues related to images with very high channel count' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 614 sbesson 'CodeQL workflow updates' - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-python-superbuild-push#409 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/409/)' 2025-05-16 01:04:21,217 [ scc.git] DEBUG [detached HEAD 1748610dc] merge master -Dorg -Ssuccess-only 2025-05-16 01:04:21,218 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-16 01:04:21,218 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-16 01:04:21,267 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-05-16 01:04:21,367 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:21,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:04:21,540 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-05-16 01:04:21,784 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:21,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:04:21,945 [ scc.config] DEBUG Found submodule.omero-py.url 2025-05-16 01:04:22,189 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:22,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:04:22,371 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-05-16 01:04:22,615 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:22,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:04:22,786 [ scc.config] DEBUG Found submodule.omero-web.url 2025-05-16 01:04:23,030 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-16 01:04:23,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-16 01:04:23,212 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-16 01:04:23,246 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1d34aa3550> has local changes 2025-05-16 01:04:23,246 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 606 knabar 'Fix issues related to images with very high channel count' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 614 sbesson 'CodeQL workflow updates' - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-python-superbuild-push#409 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/409/)' 2025-05-16 01:04:23,255 [ scc.git] DEBUG [detached HEAD f377f3a] merge master -Dorg -Ssuccess-only 2025-05-16 01:04:23,255 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-05-16 01:04:23,255 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-05-16 01:04:23,256 [ scc.merge] INFO Already up to date. 2025-05-16 01:04:23,256 [ scc.merge] INFO 2025-05-16 01:04:23,256 [ scc.merge] INFO 2025-05-16 01:04:23,256 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-05-16 01:04:23,256 [ scc.merge] INFO Already up to date. 2025-05-16 01:04:23,256 [ scc.merge] INFO 2025-05-16 01:04:23,256 [ scc.merge] INFO Merged PRs: 2025-05-16 01:04:23,256 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-05-16 01:04:23,256 [ scc.merge] INFO 2025-05-16 01:04:23,256 [ scc.merge] INFO Repository: ome/omero-marshal 2025-05-16 01:04:23,256 [ scc.merge] INFO Excluded PRs: 2025-05-16 01:04:23,256 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-05-16 01:04:23,256 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-05-16 01:04:23,256 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-05-16 01:04:23,256 [ scc.merge] INFO Already up to date. 2025-05-16 01:04:23,256 [ scc.merge] INFO 2025-05-16 01:04:23,256 [ scc.merge] INFO Merged PRs: 2025-05-16 01:04:23,256 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-05-16 01:04:23,256 [ scc.merge] INFO 2025-05-16 01:04:23,256 [ scc.merge] INFO Repository: ome/omero-py 2025-05-16 01:04:23,256 [ scc.merge] INFO Excluded PRs: 2025-05-16 01:04:23,256 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) 2025-05-16 01:04:23,256 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric) 2025-05-16 01:04:23,256 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) 2025-05-16 01:04:23,256 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-05-16 01:04:23,256 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) 2025-05-16 01:04:23,256 [ scc.merge] INFO Already up to date. 2025-05-16 01:04:23,256 [ scc.merge] INFO 2025-05-16 01:04:23,256 [ scc.merge] INFO Merged PRs: 2025-05-16 01:04:23,256 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-05-16 01:04:23,256 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-05-16 01:04:23,256 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-05-16 01:04:23,256 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-05-16 01:04:23,256 [ scc.merge] INFO - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' 2025-05-16 01:04:23,256 [ scc.merge] INFO 2025-05-16 01:04:23,256 [ scc.merge] INFO Repository: ome/omero-scripts 2025-05-16 01:04:23,256 [ scc.merge] INFO Excluded PRs: 2025-05-16 01:04:23,256 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-05-16 01:04:23,257 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-05-16 01:04:23,257 [ scc.merge] INFO Already up to date. 2025-05-16 01:04:23,257 [ scc.merge] INFO 2025-05-16 01:04:23,257 [ scc.merge] INFO Merged PRs: 2025-05-16 01:04:23,257 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-05-16 01:04:23,257 [ scc.merge] INFO 2025-05-16 01:04:23,257 [ scc.merge] INFO Conflicting PRs (not included): 2025-05-16 01:04:23,257 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-05-16 01:04:23,257 [ scc.merge] INFO 2025-05-16 01:04:23,257 [ scc.merge] INFO Repository: ome/omero-web 2025-05-16 01:04:23,257 [ scc.merge] INFO Excluded PRs: 2025-05-16 01:04:23,257 [ scc.merge] INFO - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-05-16 01:04:23,257 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-05-16 01:04:23,257 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2025-05-16 01:04:23,257 [ scc.merge] INFO Already up to date. 2025-05-16 01:04:23,257 [ scc.merge] INFO 2025-05-16 01:04:23,257 [ scc.merge] INFO Merged PRs: 2025-05-16 01:04:23,257 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-05-16 01:04:23,257 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-05-16 01:04:23,257 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-05-16 01:04:23,257 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-05-16 01:04:23,257 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2025-05-16 01:04:23,257 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-05-16 01:04:23,257 [ scc.merge] INFO - PR 606 knabar 'Fix issues related to images with very high channel count' 2025-05-16 01:04:23,257 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-05-16 01:04:23,257 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2025-05-16 01:04:23,257 [ scc.merge] INFO - PR 614 sbesson 'CodeQL workflow updates' 2025-05-16 01:04:23,257 [ scc.merge] INFO - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-05-16 01:04:23,257 [ scc.merge] INFO 2025-05-16 01:04:23,257 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-05-16 01:04:23,257 [ scc.git] DEBUG Calling 'git remote' 2025-05-16 01:04:23,260 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-05-16 01:04:23,260 [ scc.git] DEBUG Calling 'git remote' 2025-05-16 01:04:23,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-16 01:04:23,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-05-16 01:04:23,263 [ scc.git] DEBUG Calling 'git remote' 2025-05-16 01:04:23,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-16 01:04:23,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-05-16 01:04:23,265 [ scc.git] DEBUG Calling 'git remote' 2025-05-16 01:04:23,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-16 01:04:23,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-05-16 01:04:23,268 [ scc.git] DEBUG Calling 'git remote' 2025-05-16 01:04:23,270 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-16 01:04:23,270 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-05-16 01:04:23,270 [ scc.git] DEBUG Calling 'git remote' 2025-05-16 01:04:23,273 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 6d44f66 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from e485be49 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 950b28b nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 4b979f847 nothing to commit, working tree clean HEAD detached from 155f8de nothing to commit, working tree clean 2025-05-16 01:04:53,290 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS