![[Jenkins]](/jenkins/static/9bac06d9/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 585 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 275cf49111cab67b32c61ae880152ce050cecf83 (refs/remotes/origin/master) Commit message: "Merge pull request #325 from ome/dependabot/submodules/omero-py-973b6bd" > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 275cf49111cab67b32c61ae880152ce050cecf83 # timeout=10 > git rev-list --no-walk 275cf49111cab67b32c61ae880152ce050cecf83 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 517 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.2 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.7.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.14-py3-none-any.whl.metadata (24 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.4-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.14.1-py3-none-any.whl.metadata (3.0 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-45.0.6-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.14 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting pycparser (from cffi>=1.14->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.8.3-py3-none-any.whl.metadata (2.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.7.0-py3-none-any.whl (416 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-45.0.6-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached requests-2.32.4-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.8.3-py3-none-any.whl (161 kB) Using cached typing_extensions-4.14.1-py3-none-any.whl (43 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Using cached ruamel.yaml-0.18.14-py3-none-any.whl (118 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.7.0 PyYAML-6.0.2 certifi-2025.8.3 cffi-1.17.1 charset_normalizer-3.4.3 cryptography-45.0.6 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.4 ruamel.yaml-0.18.14 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.14.1 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-08-13 00:46:32,869 [ scc.config] DEBUG Found github.token 2025-08-13 00:46:32,871 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:33,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:46:33,344 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:33,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:46:33,797 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:34,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-08-13 00:46:34,047 [ scc.gh] DEBUG 4618 remaining from 5000 (Reset at 01:08 2025-08-13 00:46:34,047 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-13 00:46:34,050 [ scc.git] DEBUG Check current status 2025-08-13 00:46:34,050 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-13 00:46:34,053 [ scc.git] DEBUG 275cf49 Merge pull request #325 from ome/dependabot/submodules/omero-py-973b6bd 2025-08-13 00:46:34,054 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-13 00:46:34,114 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-08-13 00:46:34,311 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-08-13 00:46:34,408 [ scc.git] DEBUG 973b6bd7b4cb0fc1f06e3462a739b654390a2f60 omero-py (v5.21.0-3-g973b6bd7) 2025-08-13 00:46:34,412 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34) 2025-08-13 00:46:35,269 [ scc.git] DEBUG d5facbbcfa196ac37307a6e4b67cbc606b9b0908 omero-web (v5.29.0-17-gd5facbbcf) 2025-08-13 00:46:35,272 [ scc.config] DEBUG Found remote.origin.url 2025-08-13 00:46:35,273 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:35,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-08-13 00:46:35,830 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:36,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-13 00:46:36,373 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:36,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-13 00:46:36,841 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:37,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-13 00:46:37,302 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:37,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-13 00:46:37,513 [ scc.git] DEBUG Resetting... 2025-08-13 00:46:37,514 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-08-13 00:46:37,518 [ scc.git] DEBUG HEAD is now at 275cf49 Merge pull request #325 from ome/dependabot/submodules/omero-py-973b6bd 2025-08-13 00:46:37,518 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-08-13 00:46:37,575 [ scc.git] DEBUG Check current status 2025-08-13 00:46:37,575 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-13 00:46:37,578 [ scc.git] DEBUG 275cf49 Merge pull request #325 from ome/dependabot/submodules/omero-py-973b6bd 2025-08-13 00:46:37,578 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-13 00:46:37,621 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-08-13 00:46:37,624 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-08-13 00:46:37,629 [ scc.git] DEBUG 973b6bd7b4cb0fc1f06e3462a739b654390a2f60 omero-py (v5.21.0-3-g973b6bd7) 2025-08-13 00:46:37,633 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34) 2025-08-13 00:46:37,639 [ scc.git] DEBUG d5facbbcfa196ac37307a6e4b67cbc606b9b0908 omero-web (v5.29.0-17-gd5facbbcf) 2025-08-13 00:46:37,639 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-08-13 00:46:37,640 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-08-13 00:46:37,640 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-08-13 00:46:37,640 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-08-13 00:46:37,640 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-08-13 00:46:37,640 [ scc.repo] DEBUG ## PRs found: 2025-08-13 00:46:37,764 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:38,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2025-08-13 00:46:38,358 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:38,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/328 HTTP/1.1" 200 None 2025-08-13 00:46:38,651 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-13 00:46:38,651 [ scc.repo] DEBUG - PR 328 dependabot[bot] 'Bump omero-py from `973b6bd` to `70b6235`' 2025-08-13 00:46:38,902 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:39,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/327 HTTP/1.1" 200 None 2025-08-13 00:46:39,160 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-13 00:46:39,160 [ scc.repo] DEBUG - PR 327 dependabot[bot] 'Bump omero-web from `d5facbb` to `c275264`' 2025-08-13 00:46:39,160 [ scc.repo] DEBUG ## Branches found: 2025-08-13 00:46:39,160 [ scc.git] DEBUG Get sha1 of %s 2025-08-13 00:46:39,160 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:46:39,162 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-13 00:46:39,165 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-13 00:46:39,165 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-13 00:46:39,168 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-13 00:46:39,171 [ scc.git] DEBUG Already up to date. 2025-08-13 00:46:39,171 [ scc.git] DEBUG Calling 'git fetch origin pull/327/head' 2025-08-13 00:46:39,466 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2025-08-13 00:46:39,466 [ scc.git] DEBUG * branch refs/pull/327/head -> FETCH_HEAD 2025-08-13 00:46:39,473 [ scc.git] DEBUG Calling 'git fetch origin pull/328/head' 2025-08-13 00:46:39,743 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2025-08-13 00:46:39,744 [ scc.git] DEBUG * branch refs/pull/328/head -> FETCH_HEAD 2025-08-13 00:46:39,750 [ scc.git] DEBUG ## Unique users: [] 2025-08-13 00:46:39,751 [ scc.git] DEBUG Get sha1 of %s 2025-08-13 00:46:39,751 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:46:39,753 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...acd6c212282fc45a288c662b1077df0abf25ea06' 2025-08-13 00:46:39,771 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:46:39,773 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 327 (Bump omero-web from `d5facbb` to `c275264`) acd6c212282fc45a288c662b1077df0abf25ea06' 2025-08-13 00:46:39,782 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-13 00:46:39,785 [ scc.git] DEBUG omero-web | 2 +- 2025-08-13 00:46:39,785 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-13 00:46:39,787 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:39,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:46:39,970 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37fa71afec190c2d3c417ea0701c6bae1dd3fbba' 2025-08-13 00:46:39,984 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:46:39,986 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 328 (Bump omero-py from `973b6bd` to `70b6235`) 37fa71afec190c2d3c417ea0701c6bae1dd3fbba' 2025-08-13 00:46:40,047 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-13 00:46:40,049 [ scc.git] DEBUG omero-py | 2 +- 2025-08-13 00:46:40,049 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-13 00:46:40,221 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:40,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:46:40,414 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-13 00:46:40,616 [ scc.git] DEBUG Submodule path 'omero-py': checked out '70b6235a7283f1729225c4c3c24f01dfe97ae12b' 2025-08-13 00:46:40,727 [ scc.git] DEBUG Submodule path 'omero-web': checked out 'c2752646d865e17976dcd2582cefb18fc5c4c0fc' 2025-08-13 00:46:40,728 [ scc.git] DEBUG Get sha1 of %s 2025-08-13 00:46:40,728 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:46:40,730 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-13 00:46:41,023 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff7ef25a7d0> has no local changes 2025-08-13 00:46:41,023 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 327 dependabot[bot] 'Bump omero-web from `d5facbb` to `c275264`' - PR 328 dependabot[bot] 'Bump omero-py from `973b6bd` to `70b6235`' Generated by OMERO-python-superbuild-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/489/)' 2025-08-13 00:46:41,050 [ scc.git] DEBUG [detached HEAD 81b56af] merge master -Dorg -Snone 2025-08-13 00:46:41,050 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-08-13 00:46:41,050 [ scc.merge] INFO Already up to date. 2025-08-13 00:46:41,050 [ scc.merge] INFO 2025-08-13 00:46:41,050 [ scc.merge] INFO Merged PRs: 2025-08-13 00:46:41,050 [ scc.merge] INFO - PR 327 dependabot[bot] 'Bump omero-web from `d5facbb` to `c275264`' 2025-08-13 00:46:41,051 [ scc.merge] INFO - PR 328 dependabot[bot] 'Bump omero-py from `973b6bd` to `70b6235`' 2025-08-13 00:46:41,051 [ scc.merge] INFO 2025-08-13 00:46:41,051 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-08-13 00:46:41,051 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-08-13 00:46:42,952 [ scc.config] DEBUG Found github.token 2025-08-13 00:46:42,953 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:43,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:46:43,385 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:43,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:46:43,833 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:44,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-08-13 00:46:44,024 [ scc.gh] DEBUG 4606 remaining from 5000 (Reset at 01:08 2025-08-13 00:46:44,025 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-13 00:46:44,027 [ scc.git] DEBUG Check current status 2025-08-13 00:46:44,027 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-13 00:46:44,030 [ scc.git] DEBUG 81b56af merge master -Dorg -Snone 2025-08-13 00:46:44,030 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-13 00:46:44,072 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-08-13 00:46:44,075 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-08-13 00:46:44,080 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-08-13 00:46:44,085 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34) 2025-08-13 00:46:44,089 [ scc.git] DEBUG c2752646d865e17976dcd2582cefb18fc5c4c0fc omero-web (v5.29.1-1-gc2752646d) 2025-08-13 00:46:44,092 [ scc.config] DEBUG Found remote.origin.url 2025-08-13 00:46:44,092 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-08-13 00:46:44,093 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-08-13 00:46:44,275 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:44,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-08-13 00:46:44,836 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:45,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-13 00:46:45,347 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:45,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-13 00:46:45,838 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:46,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-13 00:46:46,325 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:46,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-13 00:46:46,514 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-13 00:46:46,563 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-08-13 00:46:46,563 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-13 00:46:46,566 [ scc.git] DEBUG Check current status 2025-08-13 00:46:46,566 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-13 00:46:46,569 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-08-13 00:46:46,569 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-13 00:46:46,611 [ scc.config] DEBUG Found remote.origin.url 2025-08-13 00:46:46,765 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:47,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-08-13 00:46:47,273 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:47,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-13 00:46:47,824 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:48,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-13 00:46:48,320 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:48,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-13 00:46:48,795 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:49,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-13 00:46:49,045 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-13 00:46:49,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-13 00:46:49,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-08-13 00:46:49,086 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-13 00:46:49,088 [ scc.git] DEBUG Check current status 2025-08-13 00:46:49,088 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-13 00:46:49,090 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build 2025-08-13 00:46:49,091 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-13 00:46:49,132 [ scc.config] DEBUG Found remote.origin.url 2025-08-13 00:46:49,296 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:49,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-08-13 00:46:49,843 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:50,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-13 00:46:50,336 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:50,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-13 00:46:50,772 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:50,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-13 00:46:51,221 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:51,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-13 00:46:51,442 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-13 00:46:51,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-13 00:46:51,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-08-13 00:46:51,483 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-13 00:46:51,485 [ scc.git] DEBUG Check current status 2025-08-13 00:46:51,485 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-13 00:46:51,488 [ scc.git] DEBUG 70b6235a Merge pull request #464 from dominikl/map_anno_wrapper 2025-08-13 00:46:51,488 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-13 00:46:51,530 [ scc.config] DEBUG Found remote.origin.url 2025-08-13 00:46:51,693 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:52,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-08-13 00:46:52,298 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:52,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-13 00:46:52,841 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:53,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-13 00:46:53,286 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:53,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-13 00:46:53,757 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:53,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-13 00:46:53,938 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-13 00:46:53,979 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-13 00:46:53,979 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-08-13 00:46:53,979 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-13 00:46:53,981 [ scc.git] DEBUG Check current status 2025-08-13 00:46:53,981 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-13 00:46:53,984 [ scc.git] DEBUG 573db34 Bump version: 5.9.1 → 5.9.2.dev0 2025-08-13 00:46:53,984 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-13 00:46:54,027 [ scc.config] DEBUG Found remote.origin.url 2025-08-13 00:46:54,028 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-08-13 00:46:54,189 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:54,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-08-13 00:46:54,774 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:55,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-13 00:46:55,283 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:55,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-13 00:46:55,749 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:55,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-13 00:46:56,205 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:56,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-13 00:46:56,420 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-13 00:46:56,462 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-13 00:46:56,463 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-08-13 00:46:56,463 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-13 00:46:56,465 [ scc.git] DEBUG Check current status 2025-08-13 00:46:56,465 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-13 00:46:56,468 [ scc.git] DEBUG c2752646d Bump version: 5.29.1 → 5.29.2.dev0 2025-08-13 00:46:56,468 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-13 00:46:56,510 [ scc.config] DEBUG Found remote.origin.url 2025-08-13 00:46:56,671 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:56,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-08-13 00:46:57,191 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:57,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-13 00:46:57,712 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:57,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-13 00:46:58,161 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:58,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-13 00:46:58,617 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:58,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-13 00:46:58,865 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-13 00:46:58,906 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-13 00:46:58,906 [ scc.git] DEBUG Resetting... 2025-08-13 00:46:58,906 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-08-13 00:46:58,911 [ scc.git] DEBUG HEAD is now at 81b56af merge master -Dorg -Snone 2025-08-13 00:46:58,911 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-08-13 00:46:58,965 [ scc.git] DEBUG Check current status 2025-08-13 00:46:58,965 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-13 00:46:58,967 [ scc.git] DEBUG 81b56af merge master -Dorg -Snone 2025-08-13 00:46:58,967 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-13 00:46:59,009 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-08-13 00:46:59,013 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-08-13 00:46:59,018 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-08-13 00:46:59,023 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34) 2025-08-13 00:46:59,027 [ scc.git] DEBUG c2752646d865e17976dcd2582cefb18fc5c4c0fc omero-web (v5.29.1-1-gc2752646d) 2025-08-13 00:46:59,028 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-08-13 00:46:59,028 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-08-13 00:46:59,028 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-08-13 00:46:59,028 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-08-13 00:46:59,028 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-08-13 00:46:59,028 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-08-13 00:46:59,028 [ scc.repo] DEBUG ## PRs found: 2025-08-13 00:46:59,116 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:59,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2025-08-13 00:46:59,666 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:46:59,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/328 HTTP/1.1" 200 None 2025-08-13 00:46:59,919 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-13 00:47:00,170 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:00,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/37fa71afec190c2d3c417ea0701c6bae1dd3fbba HTTP/1.1" 200 None 2025-08-13 00:47:00,787 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:01,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/37fa71afec190c2d3c417ea0701c6bae1dd3fbba/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-13 00:47:01,284 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:01,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/37fa71afec190c2d3c417ea0701c6bae1dd3fbba HTTP/1.1" 200 None 2025-08-13 00:47:01,911 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:02,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/37fa71afec190c2d3c417ea0701c6bae1dd3fbba?per_page=1 HTTP/1.1" 200 2 2025-08-13 00:47:02,141 [ scc.repo] DEBUG - PR 328 dependabot[bot] 'Bump omero-py from `973b6bd` to `70b6235`' 2025-08-13 00:47:02,392 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:02,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/327 HTTP/1.1" 200 None 2025-08-13 00:47:02,657 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-13 00:47:02,908 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:03,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/acd6c212282fc45a288c662b1077df0abf25ea06 HTTP/1.1" 200 None 2025-08-13 00:47:03,522 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:03,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/acd6c212282fc45a288c662b1077df0abf25ea06/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-13 00:47:04,044 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:04,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/acd6c212282fc45a288c662b1077df0abf25ea06 HTTP/1.1" 200 None 2025-08-13 00:47:04,601 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:04,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/acd6c212282fc45a288c662b1077df0abf25ea06?per_page=1 HTTP/1.1" 200 2 2025-08-13 00:47:04,824 [ scc.repo] DEBUG - PR 327 dependabot[bot] 'Bump omero-web from `d5facbb` to `c275264`' 2025-08-13 00:47:04,824 [ scc.repo] DEBUG ## Branches found: 2025-08-13 00:47:04,824 [ scc.git] DEBUG Get sha1 of %s 2025-08-13 00:47:04,824 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:04,827 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-13 00:47:04,829 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-13 00:47:04,829 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-13 00:47:04,832 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-13 00:47:04,835 [ scc.git] DEBUG Already up to date. 2025-08-13 00:47:04,836 [ scc.git] DEBUG Calling 'git fetch origin pull/327/head' 2025-08-13 00:47:05,139 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2025-08-13 00:47:05,139 [ scc.git] DEBUG * branch refs/pull/327/head -> FETCH_HEAD 2025-08-13 00:47:05,146 [ scc.git] DEBUG Calling 'git fetch origin pull/328/head' 2025-08-13 00:47:05,420 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2025-08-13 00:47:05,420 [ scc.git] DEBUG * branch refs/pull/328/head -> FETCH_HEAD 2025-08-13 00:47:05,427 [ scc.git] DEBUG ## Unique users: [] 2025-08-13 00:47:05,427 [ scc.git] DEBUG Get sha1 of %s 2025-08-13 00:47:05,427 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:05,430 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...acd6c212282fc45a288c662b1077df0abf25ea06' 2025-08-13 00:47:05,433 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:05,435 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 327 (Bump omero-web from `d5facbb` to `c275264`) acd6c212282fc45a288c662b1077df0abf25ea06' 2025-08-13 00:47:05,437 [ scc.git] DEBUG Already up to date. 2025-08-13 00:47:05,439 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:05,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:47:05,626 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37fa71afec190c2d3c417ea0701c6bae1dd3fbba' 2025-08-13 00:47:05,629 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:05,631 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 328 (Bump omero-py from `973b6bd` to `70b6235`) 37fa71afec190c2d3c417ea0701c6bae1dd3fbba' 2025-08-13 00:47:05,634 [ scc.git] DEBUG Already up to date. 2025-08-13 00:47:05,877 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:06,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:47:06,077 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-13 00:47:06,119 [ scc.git] DEBUG Get sha1 of %s 2025-08-13 00:47:06,119 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:06,121 [ scc.repo] DEBUG ## PRs found: 2025-08-13 00:47:06,328 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:06,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-08-13 00:47:06,891 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:07,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-08-13 00:47:07,396 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:07,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-08-13 00:47:07,911 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:08,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-08-13 00:47:08,452 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:08,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-13 00:47:08,942 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:09,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-08-13 00:47:09,458 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:09,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-08-13 00:47:09,673 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-08-13 00:47:09,673 [ scc.repo] DEBUG ## Branches found: 2025-08-13 00:47:09,673 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-08-13 00:47:09,673 [ scc.git] DEBUG Get sha1 of %s 2025-08-13 00:47:09,673 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:09,676 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-13 00:47:09,679 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-13 00:47:09,679 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-13 00:47:09,682 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-13 00:47:09,685 [ scc.git] DEBUG Already up to date. 2025-08-13 00:47:09,685 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-08-13 00:47:10,042 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-08-13 00:47:10,042 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-08-13 00:47:10,047 [ scc.git] DEBUG ## Unique users: [] 2025-08-13 00:47:10,047 [ scc.git] DEBUG Get sha1 of %s 2025-08-13 00:47:10,047 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:10,050 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-08-13 00:47:10,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:10,055 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-08-13 00:47:10,154 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-08-13 00:47:10,155 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-08-13 00:47:10,155 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-08-13 00:47:10,155 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-08-13 00:47:10,155 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-08-13 00:47:10,155 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-08-13 00:47:10,155 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-08-13 00:47:10,155 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-08-13 00:47:10,155 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-08-13 00:47:10,156 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-13 00:47:10,160 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-08-13 00:47:10,160 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-08-13 00:47:10,160 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-08-13 00:47:10,160 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-08-13 00:47:10,160 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-08-13 00:47:10,160 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-08-13 00:47:10,160 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-08-13 00:47:10,160 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-08-13 00:47:10,160 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-08-13 00:47:10,160 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-08-13 00:47:10,161 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:10,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:47:10,340 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-13 00:47:10,382 [ scc.git] DEBUG Get sha1 of %s 2025-08-13 00:47:10,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:10,384 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-13 00:47:10,423 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-13 00:47:10,427 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa7f2753dd0> has no local changes 2025-08-13 00:47:10,427 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/489/)' 2025-08-13 00:47:10,434 [ scc.git] DEBUG [detached HEAD fa76aeb] merge master -Dorg -Ssuccess-only 2025-08-13 00:47:10,434 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-13 00:47:10,434 [ scc.repo] DEBUG ## PRs found: 2025-08-13 00:47:10,592 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:10,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-08-13 00:47:11,183 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:11,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-08-13 00:47:11,708 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:11,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2025-08-13 00:47:12,170 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:12,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-08-13 00:47:12,692 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:12,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-08-13 00:47:13,197 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:13,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-08-13 00:47:13,749 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:13,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-13 00:47:14,234 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:14,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-08-13 00:47:14,777 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:14,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-08-13 00:47:14,999 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-08-13 00:47:15,250 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:15,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-08-13 00:47:15,777 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:16,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-08-13 00:47:16,290 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:16,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-08-13 00:47:16,801 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:17,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-08-13 00:47:17,021 [ scc.repo] DEBUG ## Branches found: 2025-08-13 00:47:17,021 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-08-13 00:47:17,021 [ scc.git] DEBUG Get sha1 of %s 2025-08-13 00:47:17,021 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:17,024 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-13 00:47:17,026 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-13 00:47:17,026 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-13 00:47:17,029 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-13 00:47:17,033 [ scc.git] DEBUG Already up to date. 2025-08-13 00:47:17,033 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-08-13 00:47:17,444 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-08-13 00:47:17,444 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-08-13 00:47:17,449 [ scc.git] DEBUG ## Unique users: [] 2025-08-13 00:47:17,449 [ scc.git] DEBUG Get sha1 of %s 2025-08-13 00:47:17,449 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:17,451 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-08-13 00:47:17,456 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:17,458 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-08-13 00:47:17,475 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-08-13 00:47:17,476 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-13 00:47:17,480 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-08-13 00:47:17,480 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-08-13 00:47:17,480 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-08-13 00:47:17,481 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:17,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:47:17,661 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-13 00:47:17,701 [ scc.git] DEBUG Get sha1 of %s 2025-08-13 00:47:17,701 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:17,703 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-13 00:47:17,741 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-13 00:47:17,746 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa7f0fb97d0> has no local changes 2025-08-13 00:47:17,746 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/489/)' 2025-08-13 00:47:17,753 [ scc.git] DEBUG [detached HEAD f776594] merge master -Dorg -Ssuccess-only 2025-08-13 00:47:17,753 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-13 00:47:17,753 [ scc.repo] DEBUG ## PRs found: 2025-08-13 00:47:17,912 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:18,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-08-13 00:47:18,560 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:18,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None 2025-08-13 00:47:19,064 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:19,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None 2025-08-13 00:47:19,551 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:19,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None 2025-08-13 00:47:20,066 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:20,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None 2025-08-13 00:47:20,565 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:20,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450/comments HTTP/1.1" 200 None 2025-08-13 00:47:21,069 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:21,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None 2025-08-13 00:47:21,558 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:21,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None 2025-08-13 00:47:21,840 [ scc.repo] DEBUG # ... Exclude label: exclude 2025-08-13 00:47:22,090 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:22,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-08-13 00:47:22,577 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:22,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-08-13 00:47:23,050 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:23,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-08-13 00:47:23,577 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:23,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-13 00:47:24,076 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:24,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-08-13 00:47:24,664 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:24,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 2 2025-08-13 00:47:24,858 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-08-13 00:47:25,109 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:25,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-08-13 00:47:25,613 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:25,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-08-13 00:47:26,100 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:26,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-08-13 00:47:26,629 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:26,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-13 00:47:27,143 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:27,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-13 00:47:27,681 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:27,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-08-13 00:47:28,163 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:28,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2025-08-13 00:47:28,674 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:28,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-08-13 00:47:29,230 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:29,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-13 00:47:29,754 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:29,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-08-13 00:47:30,234 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:30,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2025-08-13 00:47:30,443 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-08-13 00:47:30,694 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:30,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-08-13 00:47:31,187 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:31,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-08-13 00:47:31,666 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:31,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-08-13 00:47:32,194 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:32,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-13 00:47:32,735 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:32,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-08-13 00:47:33,241 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:33,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2 2025-08-13 00:47:33,546 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-08-13 00:47:33,797 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:34,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-08-13 00:47:34,300 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:34,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-08-13 00:47:34,798 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:35,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-08-13 00:47:35,290 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:35,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-08-13 00:47:35,794 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:36,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-08-13 00:47:36,368 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:36,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-13 00:47:36,849 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:37,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-08-13 00:47:37,351 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:37,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-08-13 00:47:37,542 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-08-13 00:47:37,543 [ scc.repo] DEBUG ## Branches found: 2025-08-13 00:47:37,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-08-13 00:47:37,543 [ scc.git] DEBUG Get sha1 of %s 2025-08-13 00:47:37,543 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:37,546 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-13 00:47:37,548 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-13 00:47:37,548 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-13 00:47:37,551 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-13 00:47:37,555 [ scc.git] DEBUG Already up to date. 2025-08-13 00:47:37,555 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-08-13 00:47:42,062 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-13 00:47:42,062 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-08-13 00:47:42,067 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-08-13 00:47:42,605 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-13 00:47:42,605 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-08-13 00:47:42,609 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-08-13 00:47:42,897 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-13 00:47:42,897 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-08-13 00:47:42,902 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-08-13 00:47:43,617 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-13 00:47:43,618 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-08-13 00:47:43,622 [ scc.git] DEBUG ## Unique users: [] 2025-08-13 00:47:43,622 [ scc.git] DEBUG Get sha1 of %s 2025-08-13 00:47:43,622 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:43,624 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-08-13 00:47:43,638 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:43,640 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-08-13 00:47:43,747 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-08-13 00:47:43,747 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-08-13 00:47:43,748 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-13 00:47:43,752 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-08-13 00:47:43,752 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-08-13 00:47:43,752 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-08-13 00:47:43,754 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:43,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:47:43,943 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-08-13 00:47:43,956 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:43,959 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-08-13 00:47:44,023 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-13 00:47:44,026 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-08-13 00:47:44,026 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-08-13 00:47:44,026 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-08-13 00:47:44,026 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-08-13 00:47:44,026 [ scc.git] DEBUG create mode 100644 connect.py 2025-08-13 00:47:44,194 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:44,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:47:44,377 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-08-13 00:47:44,390 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:44,393 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-08-13 00:47:44,511 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-08-13 00:47:44,512 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-13 00:47:44,516 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-08-13 00:47:44,516 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-08-13 00:47:44,628 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:44,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:47:44,822 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-08-13 00:47:44,835 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:44,837 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-08-13 00:47:44,922 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-08-13 00:47:44,924 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-13 00:47:44,930 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-08-13 00:47:44,930 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-08-13 00:47:45,073 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:45,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:47:45,267 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-13 00:47:45,307 [ scc.git] DEBUG Get sha1 of %s 2025-08-13 00:47:45,307 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:45,310 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-13 00:47:45,349 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-13 00:47:45,356 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa7f24597d0> has no local changes 2025-08-13 00:47:45,356 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' Generated by OMERO-python-superbuild-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/489/)' 2025-08-13 00:47:45,363 [ scc.git] DEBUG [detached HEAD 3aa5232e] merge master -Dorg -Ssuccess-only 2025-08-13 00:47:45,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-13 00:47:45,363 [ scc.git] INFO Overriding base-branch from master to develop 2025-08-13 00:47:45,364 [ scc.repo] DEBUG ## PRs found: 2025-08-13 00:47:45,518 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:45,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-08-13 00:47:46,085 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:46,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-08-13 00:47:46,591 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:46,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-08-13 00:47:47,102 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:47,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-08-13 00:47:47,620 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:47,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-13 00:47:48,178 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:48,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-13 00:47:48,669 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:48,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-08-13 00:47:49,183 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:49,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-08-13 00:47:49,404 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-08-13 00:47:49,656 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:49,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-08-13 00:47:50,159 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:50,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-08-13 00:47:50,657 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:50,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-08-13 00:47:51,218 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:51,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-13 00:47:51,725 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:51,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-08-13 00:47:52,206 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:52,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-08-13 00:47:52,419 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-08-13 00:47:52,670 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:52,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-08-13 00:47:53,211 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:53,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-08-13 00:47:53,703 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:53,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-08-13 00:47:54,214 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:54,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-08-13 00:47:54,482 [ scc.repo] DEBUG ## Branches found: 2025-08-13 00:47:54,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-08-13 00:47:54,482 [ scc.git] DEBUG Get sha1 of %s 2025-08-13 00:47:54,482 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:54,485 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-08-13 00:47:54,487 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-13 00:47:54,487 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-08-13 00:47:54,491 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-08-13 00:47:54,494 [ scc.git] DEBUG Already up to date. 2025-08-13 00:47:54,494 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-08-13 00:47:55,193 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-08-13 00:47:55,193 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-08-13 00:47:55,198 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-08-13 00:47:55,966 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-08-13 00:47:55,966 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-08-13 00:47:55,972 [ scc.git] DEBUG ## Unique users: [] 2025-08-13 00:47:55,972 [ scc.git] DEBUG Get sha1 of %s 2025-08-13 00:47:55,972 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:55,974 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-13 00:47:55,980 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:55,982 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-13 00:47:56,072 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-08-13 00:47:56,073 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-13 00:47:56,073 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-13 00:47:56,076 [ scc.git] DEBUG Calling 'git reset --hard 573db340d5d1429fa17c7e486206948412a7c150' 2025-08-13 00:47:56,079 [ scc.git] DEBUG HEAD is now at 573db34 Bump version: 5.9.1 → 5.9.2.dev0 2025-08-13 00:47:56,081 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:56,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:47:56,303 [ scc.git] DEBUG Calling 'git merge-base 573db340d5d1429fa17c7e486206948412a7c150 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-13 00:47:56,309 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..573db340d5d1429fa17c7e486206948412a7c150' 2025-08-13 00:47:56,313 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#489](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/489/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/489/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-08-13 00:47:56,315 [ scc.config] DEBUG Found github.token 2025-08-13 00:47:56,315 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-08-13 00:47:56,315 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-08-13 00:47:56,320 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:56,322 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-08-13 00:47:56,332 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-13 00:47:56,335 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-08-13 00:47:56,336 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-08-13 00:47:56,555 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:56,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:47:56,748 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-13 00:47:56,788 [ scc.git] DEBUG Get sha1 of %s 2025-08-13 00:47:56,788 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:47:56,791 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-13 00:47:56,830 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-13 00:47:56,834 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa7efcf15d0> has no local changes 2025-08-13 00:47:56,835 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/489/)' 2025-08-13 00:47:56,842 [ scc.git] DEBUG [detached HEAD 9ec3d7a] merge master -Dorg -Ssuccess-only 2025-08-13 00:47:56,842 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-13 00:47:56,842 [ scc.repo] DEBUG ## PRs found: 2025-08-13 00:47:56,999 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:57,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-08-13 00:47:57,679 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:58,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/629 HTTP/1.1" 200 None 2025-08-13 00:47:58,315 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:58,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/628 HTTP/1.1" 200 None 2025-08-13 00:47:58,796 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:59,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-08-13 00:47:59,329 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:47:59,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-13 00:47:59,837 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:00,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-13 00:48:00,366 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:00,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-08-13 00:48:00,927 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:01,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b8c7989c9900270d7cf27523f2649bbb903c7a60?per_page=1 HTTP/1.1" 200 None 2025-08-13 00:48:01,405 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:01,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-08-13 00:48:01,909 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:02,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/status HTTP/1.1" 200 None 2025-08-13 00:48:02,140 [ scc.repo] DEBUG - PR 628 jburel 'Add protocol required since Django4' 2025-08-13 00:48:02,391 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:02,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/619 HTTP/1.1" 200 None 2025-08-13 00:48:02,928 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:03,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-08-13 00:48:03,499 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:03,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-13 00:48:04,017 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:04,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-13 00:48:04,527 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:04,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-08-13 00:48:05,093 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:05,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6dbfcebfee72e20f36a434fdc8850930d89acdac?per_page=1 HTTP/1.1" 200 None 2025-08-13 00:48:05,555 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:05,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-08-13 00:48:06,048 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:06,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/status HTTP/1.1" 200 None 2025-08-13 00:48:06,304 [ scc.repo] DEBUG - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-08-13 00:48:06,554 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:06,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None 2025-08-13 00:48:07,088 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:07,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None 2025-08-13 00:48:07,577 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:07,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None 2025-08-13 00:48:08,107 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:08,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-13 00:48:08,633 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:08,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-13 00:48:09,177 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:09,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None 2025-08-13 00:48:09,709 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:09,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/cca34cb278cac5fb8088df75cc4fe5f315810342?per_page=1 HTTP/1.1" 200 None 2025-08-13 00:48:10,195 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:10,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None 2025-08-13 00:48:10,654 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:10,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/status HTTP/1.1" 200 None 2025-08-13 00:48:10,902 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display' 2025-08-13 00:48:11,153 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:11,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None 2025-08-13 00:48:11,679 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:11,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None 2025-08-13 00:48:12,184 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:12,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-08-13 00:48:12,717 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:12,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-13 00:48:13,248 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:13,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-13 00:48:13,802 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:14,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-08-13 00:48:14,288 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:14,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None 2025-08-13 00:48:14,757 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:15,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-08-13 00:48:15,297 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:15,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None 2025-08-13 00:48:15,513 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-08-13 00:48:15,764 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:16,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-08-13 00:48:16,272 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:16,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2025-08-13 00:48:16,781 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:17,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-08-13 00:48:17,330 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:17,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-13 00:48:17,822 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:18,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-13 00:48:18,350 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:18,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-08-13 00:48:18,890 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:19,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-08-13 00:48:19,359 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:19,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-08-13 00:48:19,851 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:20,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-08-13 00:48:20,081 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-08-13 00:48:20,332 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:20,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-08-13 00:48:20,877 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:21,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-08-13 00:48:21,450 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:21,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-13 00:48:21,955 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:22,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-13 00:48:22,475 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:22,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-08-13 00:48:22,955 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:23,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-08-13 00:48:23,469 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:23,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-08-13 00:48:24,008 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:24,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-08-13 00:48:24,231 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2025-08-13 00:48:24,482 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:24,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-08-13 00:48:24,998 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:25,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-08-13 00:48:25,512 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:25,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-08-13 00:48:26,036 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:26,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-13 00:48:26,522 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:26,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-13 00:48:27,094 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:27,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-08-13 00:48:27,608 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:27,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-08-13 00:48:28,145 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:28,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-08-13 00:48:28,617 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:28,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-08-13 00:48:28,816 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-08-13 00:48:29,066 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:29,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-08-13 00:48:29,569 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:29,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-08-13 00:48:30,059 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:30,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-08-13 00:48:30,590 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:30,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-13 00:48:31,204 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:31,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-13 00:48:31,755 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:32,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-08-13 00:48:32,292 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:32,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-08-13 00:48:32,740 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:33,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-08-13 00:48:33,262 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:33,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-08-13 00:48:33,483 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-08-13 00:48:33,734 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:33,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-08-13 00:48:34,234 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:34,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-08-13 00:48:34,702 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:34,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-08-13 00:48:35,221 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:35,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-08-13 00:48:35,734 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:36,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-08-13 00:48:36,256 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:36,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-13 00:48:36,733 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:37,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-08-13 00:48:37,273 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:37,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2 2025-08-13 00:48:37,474 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-08-13 00:48:37,725 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:37,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-08-13 00:48:38,208 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:38,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-08-13 00:48:38,685 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:38,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-08-13 00:48:39,231 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:39,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-13 00:48:39,735 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:40,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-08-13 00:48:40,264 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:40,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2 2025-08-13 00:48:40,476 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-08-13 00:48:40,727 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:40,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-08-13 00:48:41,210 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:41,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-08-13 00:48:41,692 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:41,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-08-13 00:48:42,233 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:42,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-13 00:48:42,708 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:42,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-08-13 00:48:43,230 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:43,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06b0073db19eeccb9698860f75639084ad1b1200?per_page=1 HTTP/1.1" 200 2 2025-08-13 00:48:43,411 [ scc.repo] DEBUG - PR 168 stick 'Changes to nginx @maintenance handler' 2025-08-13 00:48:43,412 [ scc.repo] DEBUG ## Branches found: 2025-08-13 00:48:43,412 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-08-13 00:48:43,412 [ scc.git] DEBUG Get sha1 of %s 2025-08-13 00:48:43,412 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:48:43,415 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-13 00:48:43,418 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-13 00:48:43,418 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-13 00:48:43,421 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-13 00:48:43,425 [ scc.git] DEBUG Already up to date. 2025-08-13 00:48:43,425 [ scc.git] DEBUG Calling 'git fetch origin pull/168/head' 2025-08-13 00:48:45,595 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-13 00:48:45,595 [ scc.git] DEBUG * branch refs/pull/168/head -> FETCH_HEAD 2025-08-13 00:48:45,600 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-08-13 00:48:46,014 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-13 00:48:46,014 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-08-13 00:48:46,018 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-08-13 00:48:46,499 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-13 00:48:46,499 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-08-13 00:48:46,504 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-08-13 00:48:47,517 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-13 00:48:47,517 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-08-13 00:48:47,521 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-08-13 00:48:48,053 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-13 00:48:48,053 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-08-13 00:48:48,058 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-08-13 00:48:48,341 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-13 00:48:48,341 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-08-13 00:48:48,346 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-08-13 00:48:49,228 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-13 00:48:49,228 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-08-13 00:48:49,233 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-08-13 00:48:49,689 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-13 00:48:49,689 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-08-13 00:48:49,694 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head' 2025-08-13 00:48:50,763 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-13 00:48:50,763 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD 2025-08-13 00:48:50,768 [ scc.git] DEBUG Calling 'git fetch origin pull/619/head' 2025-08-13 00:48:51,126 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-13 00:48:51,126 [ scc.git] DEBUG * branch refs/pull/619/head -> FETCH_HEAD 2025-08-13 00:48:51,130 [ scc.git] DEBUG Calling 'git fetch origin pull/628/head' 2025-08-13 00:48:51,415 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-13 00:48:51,415 [ scc.git] DEBUG * branch refs/pull/628/head -> FETCH_HEAD 2025-08-13 00:48:51,420 [ scc.git] DEBUG ## Unique users: [] 2025-08-13 00:48:51,420 [ scc.git] DEBUG Get sha1 of %s 2025-08-13 00:48:51,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:48:51,423 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06b0073db19eeccb9698860f75639084ad1b1200' 2025-08-13 00:48:51,431 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:48:51,433 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 168 (Changes to nginx @maintenance handler) 06b0073db19eeccb9698860f75639084ad1b1200' 2025-08-13 00:48:51,468 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-13 00:48:51,472 [ scc.git] DEBUG omeroweb/templates/nginx-development.conf.template | 2 +- 2025-08-13 00:48:51,472 [ scc.git] DEBUG omeroweb/templates/nginx-location.conf.template | 3 ++- 2025-08-13 00:48:51,472 [ scc.git] DEBUG omeroweb/templates/nginx.conf.template | 2 +- 2025-08-13 00:48:51,472 [ scc.git] DEBUG test/unit/reference_templates/nginx-development-withoptions.conf | 2 +- 2025-08-13 00:48:51,472 [ scc.git] DEBUG test/unit/reference_templates/nginx-development.conf | 2 +- 2025-08-13 00:48:51,473 [ scc.git] DEBUG test/unit/reference_templates/nginx-location-withoptions.conf | 3 ++- 2025-08-13 00:48:51,473 [ scc.git] DEBUG test/unit/reference_templates/nginx-location.conf | 3 ++- 2025-08-13 00:48:51,473 [ scc.git] DEBUG test/unit/reference_templates/nginx-withoptions.conf | 2 +- 2025-08-13 00:48:51,473 [ scc.git] DEBUG test/unit/reference_templates/nginx.conf | 2 +- 2025-08-13 00:48:51,473 [ scc.git] DEBUG test/unit/test_web.py | 1 + 2025-08-13 00:48:51,473 [ scc.git] DEBUG 10 files changed, 13 insertions(+), 9 deletions(-) 2025-08-13 00:48:51,474 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:51,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:48:51,662 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-08-13 00:48:51,671 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:48:51,673 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-08-13 00:48:52,013 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-08-13 00:48:52,013 [ scc.git] DEBUG Auto-merging setup.py 2025-08-13 00:48:52,015 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-13 00:48:52,019 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-08-13 00:48:52,019 [ scc.git] DEBUG setup.py | 1 + 2025-08-13 00:48:52,019 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-08-13 00:48:52,020 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:52,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:48:52,203 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-08-13 00:48:52,213 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:48:52,215 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-08-13 00:48:52,351 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-08-13 00:48:52,351 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-08-13 00:48:52,352 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-13 00:48:52,357 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-08-13 00:48:52,357 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-08-13 00:48:52,357 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-08-13 00:48:52,454 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:52,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:48:52,673 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-08-13 00:48:52,682 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:48:52,684 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-08-13 00:48:52,814 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-13 00:48:52,819 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-08-13 00:48:52,819 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-13 00:48:52,924 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:53,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:48:53,115 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-08-13 00:48:53,125 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:48:53,127 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-08-13 00:48:53,258 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-13 00:48:53,262 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-08-13 00:48:53,262 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-08-13 00:48:53,366 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:53,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:48:53,552 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-08-13 00:48:53,561 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:48:53,564 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-08-13 00:48:53,766 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-13 00:48:53,771 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-08-13 00:48:53,771 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-08-13 00:48:53,771 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-08-13 00:48:53,771 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-08-13 00:48:53,771 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-08-13 00:48:53,771 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-08-13 00:48:53,771 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-08-13 00:48:53,771 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-08-13 00:48:53,772 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-08-13 00:48:53,772 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-08-13 00:48:53,772 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-08-13 00:48:53,772 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-08-13 00:48:53,803 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:54,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:48:54,008 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-08-13 00:48:54,017 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:48:54,019 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-08-13 00:48:54,439 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-08-13 00:48:54,441 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-13 00:48:54,448 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-08-13 00:48:54,448 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-08-13 00:48:54,448 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-08-13 00:48:54,448 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-08-13 00:48:54,449 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:54,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:48:54,634 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-08-13 00:48:54,643 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:48:54,645 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-08-13 00:48:54,677 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-13 00:48:54,681 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++ 2025-08-13 00:48:54,681 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++---------- 2025-08-13 00:48:54,681 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-) 2025-08-13 00:48:54,885 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:55,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:48:55,092 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cca34cb278cac5fb8088df75cc4fe5f315810342' 2025-08-13 00:48:55,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:48:55,105 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) cca34cb278cac5fb8088df75cc4fe5f315810342' 2025-08-13 00:48:55,130 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-13 00:48:55,135 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 20 ++++++++++++-- 2025-08-13 00:48:55,135 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 31 +++++++++++++++------- 2025-08-13 00:48:55,135 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 2 ++ 2025-08-13 00:48:55,135 [ scc.git] DEBUG 3 files changed, 42 insertions(+), 11 deletions(-) 2025-08-13 00:48:55,343 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:55,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:48:55,520 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-08-13 00:48:55,530 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:48:55,532 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 619 (Permit subpackages as app plugins) 6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-08-13 00:48:55,764 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-08-13 00:48:55,766 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-13 00:48:55,770 [ scc.git] DEBUG omeroweb/settings.py | 9 ++++----- 2025-08-13 00:48:55,770 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 5 deletions(-) 2025-08-13 00:48:55,771 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:55,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:48:55,950 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8c7989c9900270d7cf27523f2649bbb903c7a60' 2025-08-13 00:48:55,961 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:48:55,963 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 628 (Add protocol required since Django4) b8c7989c9900270d7cf27523f2649bbb903c7a60' 2025-08-13 00:48:55,990 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-08-13 00:48:55,991 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-13 00:48:55,995 [ scc.git] DEBUG omeroweb/settings.py | 4 ++-- 2025-08-13 00:48:55,995 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2025-08-13 00:48:56,201 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:56,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:48:56,394 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-13 00:48:56,437 [ scc.git] DEBUG Get sha1 of %s 2025-08-13 00:48:56,437 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-13 00:48:56,440 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-13 00:48:56,480 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-13 00:48:56,489 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa7f248f490> has no local changes 2025-08-13 00:48:56,489 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) Already up to date. Merged PRs: - PR 168 stick 'Changes to nginx @maintenance handler' - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 628 jburel 'Add protocol required since Django4' Generated by OMERO-python-superbuild-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/489/)' 2025-08-13 00:48:56,499 [ scc.git] DEBUG [detached HEAD 8cce97985] merge master -Dorg -Ssuccess-only 2025-08-13 00:48:56,499 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-13 00:48:56,499 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-13 00:48:56,548 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-08-13 00:48:56,645 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:56,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:48:56,870 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-08-13 00:48:57,114 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:57,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:48:57,301 [ scc.config] DEBUG Found submodule.omero-py.url 2025-08-13 00:48:57,545 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:57,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:48:57,758 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-08-13 00:48:58,002 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:58,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:48:58,215 [ scc.config] DEBUG Found submodule.omero-web.url 2025-08-13 00:48:58,459 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-13 00:48:58,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-13 00:48:58,640 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-13 00:48:58,669 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa7efec4210> has local changes 2025-08-13 00:48:58,669 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 327 dependabot[bot] 'Bump omero-web from `d5facbb` to `c275264`' - PR 328 dependabot[bot] 'Bump omero-py from `973b6bd` to `70b6235`' Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) Already up to date. Merged PRs: - PR 168 stick 'Changes to nginx @maintenance handler' - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 628 jburel 'Add protocol required since Django4' Generated by OMERO-python-superbuild-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/489/)' 2025-08-13 00:48:58,677 [ scc.git] DEBUG [detached HEAD 59f59de] merge master -Dorg -Ssuccess-only 2025-08-13 00:48:58,677 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-08-13 00:48:58,678 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-08-13 00:48:58,678 [ scc.merge] INFO Already up to date. 2025-08-13 00:48:58,678 [ scc.merge] INFO 2025-08-13 00:48:58,678 [ scc.merge] INFO Merged PRs: 2025-08-13 00:48:58,678 [ scc.merge] INFO - PR 327 dependabot[bot] 'Bump omero-web from `d5facbb` to `c275264`' 2025-08-13 00:48:58,678 [ scc.merge] INFO - PR 328 dependabot[bot] 'Bump omero-py from `973b6bd` to `70b6235`' 2025-08-13 00:48:58,678 [ scc.merge] INFO 2025-08-13 00:48:58,678 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-08-13 00:48:58,678 [ scc.merge] INFO Already up to date. 2025-08-13 00:48:58,678 [ scc.merge] INFO 2025-08-13 00:48:58,678 [ scc.merge] INFO Merged PRs: 2025-08-13 00:48:58,678 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-08-13 00:48:58,678 [ scc.merge] INFO 2025-08-13 00:48:58,678 [ scc.merge] INFO Repository: ome/omero-marshal 2025-08-13 00:48:58,678 [ scc.merge] INFO Excluded PRs: 2025-08-13 00:48:58,678 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-08-13 00:48:58,678 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-08-13 00:48:58,678 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-08-13 00:48:58,678 [ scc.merge] INFO Already up to date. 2025-08-13 00:48:58,678 [ scc.merge] INFO 2025-08-13 00:48:58,678 [ scc.merge] INFO Merged PRs: 2025-08-13 00:48:58,678 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-08-13 00:48:58,678 [ scc.merge] INFO 2025-08-13 00:48:58,678 [ scc.merge] INFO Repository: ome/omero-py 2025-08-13 00:48:58,678 [ scc.merge] INFO Excluded PRs: 2025-08-13 00:48:58,678 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric) 2025-08-13 00:48:58,678 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) 2025-08-13 00:48:58,678 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric) 2025-08-13 00:48:58,678 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) 2025-08-13 00:48:58,678 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-08-13 00:48:58,678 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) 2025-08-13 00:48:58,679 [ scc.merge] INFO Already up to date. 2025-08-13 00:48:58,679 [ scc.merge] INFO 2025-08-13 00:48:58,679 [ scc.merge] INFO Merged PRs: 2025-08-13 00:48:58,679 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-08-13 00:48:58,679 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-08-13 00:48:58,679 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-08-13 00:48:58,679 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-08-13 00:48:58,679 [ scc.merge] INFO 2025-08-13 00:48:58,679 [ scc.merge] INFO Repository: ome/omero-scripts 2025-08-13 00:48:58,679 [ scc.merge] INFO Excluded PRs: 2025-08-13 00:48:58,679 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-08-13 00:48:58,679 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-08-13 00:48:58,679 [ scc.merge] INFO Already up to date. 2025-08-13 00:48:58,679 [ scc.merge] INFO 2025-08-13 00:48:58,679 [ scc.merge] INFO Merged PRs: 2025-08-13 00:48:58,679 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-08-13 00:48:58,679 [ scc.merge] INFO 2025-08-13 00:48:58,679 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-13 00:48:58,679 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-08-13 00:48:58,679 [ scc.merge] INFO 2025-08-13 00:48:58,679 [ scc.merge] INFO Repository: ome/omero-web 2025-08-13 00:48:58,679 [ scc.merge] INFO Excluded PRs: 2025-08-13 00:48:58,679 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-08-13 00:48:58,679 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-08-13 00:48:58,679 [ scc.merge] INFO Already up to date. 2025-08-13 00:48:58,679 [ scc.merge] INFO 2025-08-13 00:48:58,679 [ scc.merge] INFO Merged PRs: 2025-08-13 00:48:58,679 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' 2025-08-13 00:48:58,679 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-08-13 00:48:58,679 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-08-13 00:48:58,679 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-08-13 00:48:58,679 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-08-13 00:48:58,679 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2025-08-13 00:48:58,679 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-08-13 00:48:58,679 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-08-13 00:48:58,679 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2025-08-13 00:48:58,679 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-08-13 00:48:58,680 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4' 2025-08-13 00:48:58,680 [ scc.merge] INFO 2025-08-13 00:48:58,680 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-08-13 00:48:58,680 [ scc.git] DEBUG Calling 'git remote' 2025-08-13 00:48:58,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-08-13 00:48:58,682 [ scc.git] DEBUG Calling 'git remote' 2025-08-13 00:48:58,684 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-13 00:48:58,684 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-08-13 00:48:58,684 [ scc.git] DEBUG Calling 'git remote' 2025-08-13 00:48:58,687 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-13 00:48:58,687 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-08-13 00:48:58,687 [ scc.git] DEBUG Calling 'git remote' 2025-08-13 00:48:58,689 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-13 00:48:58,689 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-08-13 00:48:58,689 [ scc.git] DEBUG Calling 'git remote' 2025-08-13 00:48:58,691 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-13 00:48:58,692 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-08-13 00:48:58,692 [ scc.git] DEBUG Calling 'git remote' 2025-08-13 00:48:58,694 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 6d44f66 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 70b6235a nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 573db34 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from c2752646d nothing to commit, working tree clean HEAD detached from 275cf49 nothing to commit, working tree clean 2025-08-13 00:49:29,074 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS