Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2026-08-22 01:19:10,962 [ scc.config] DEBUG Found github.token
2026-08-22 01:19:10,963 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-08-22 01:19:11,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:19:11,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:19:12,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-08-22 01:19:12,140 [ scc.gh] DEBUG 4999 remaining from 5000 (Reset at 02:08
2026-08-22 01:19:12,141 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-22 01:19:12,152 [ scc.git] DEBUG Check current status
2026-08-22 01:19:12,152 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-22 01:19:12,178 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-08-22 01:19:12,179 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-22 01:19:12,317 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2026-08-22 01:19:12,370 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2026-08-22 01:19:12,457 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5)
2026-08-22 01:19:12,505 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-08-22 01:19:12,538 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2026-08-22 01:19:12,550 [ scc.config] DEBUG Found remote.origin.url
2026-08-22 01:19:12,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2026-08-22 01:19:13,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-22 01:19:13,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-22 01:19:14,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-22 01:19:14,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-22 01:19:14,825 [ scc.git] DEBUG Resetting...
2026-08-22 01:19:14,825 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-08-22 01:19:14,990 [ scc.git] DEBUG HEAD is now at b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-08-22 01:19:14,991 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-08-22 01:19:15,321 [ scc.git] DEBUG Check current status
2026-08-22 01:19:15,321 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-22 01:19:15,338 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-08-22 01:19:15,339 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-22 01:19:15,466 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2026-08-22 01:19:15,498 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2026-08-22 01:19:15,549 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5)
2026-08-22 01:19:15,580 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-08-22 01:19:15,608 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2026-08-22 01:19:15,608 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-08-22 01:19:15,608 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-08-22 01:19:15,608 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-08-22 01:19:15,608 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-08-22 01:19:15,608 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-08-22 01:19:15,608 [ scc.repo] DEBUG ## PRs found:
2026-08-22 01:19:15,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2026-08-22 01:19:16,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None
2026-08-22 01:19:16,436 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-22 01:19:16,436 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-08-22 01:19:16,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None
2026-08-22 01:19:16,940 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-22 01:19:16,940 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-08-22 01:19:17,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None
2026-08-22 01:19:17,473 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-22 01:19:17,473 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-08-22 01:19:17,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None
2026-08-22 01:19:17,982 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-22 01:19:17,982 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-08-22 01:19:17,982 [ scc.repo] DEBUG ## Branches found:
2026-08-22 01:19:17,982 [ scc.git] DEBUG Get sha1 of %s
2026-08-22 01:19:17,982 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:19:17,994 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-22 01:19:18,012 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-22 01:19:18,012 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-22 01:19:18,029 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-22 01:19:18,086 [ scc.git] DEBUG Already up to date.
2026-08-22 01:19:18,086 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head'
2026-08-22 01:19:18,558 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-22 01:19:18,558 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD
2026-08-22 01:19:18,590 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2026-08-22 01:19:19,063 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-22 01:19:19,063 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2026-08-22 01:19:19,089 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head'
2026-08-22 01:19:19,513 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-22 01:19:19,513 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD
2026-08-22 01:19:19,540 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head'
2026-08-22 01:19:19,991 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-22 01:19:19,991 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD
2026-08-22 01:19:20,016 [ scc.git] DEBUG ## Unique users: []
2026-08-22 01:19:20,016 [ scc.git] DEBUG Get sha1 of %s
2026-08-22 01:19:20,016 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:19:20,027 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c'
2026-08-22 01:19:20,044 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:19:20,052 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c'
2026-08-22 01:19:20,326 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-22 01:19:20,411 [ scc.git] DEBUG omero-marshal | 2 +-
2026-08-22 01:19:20,411 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-08-22 01:19:20,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:19:20,614 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa'
2026-08-22 01:19:20,636 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:19:20,645 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa'
2026-08-22 01:19:20,928 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-22 01:19:20,991 [ scc.git] DEBUG omero-web | 2 +-
2026-08-22 01:19:20,991 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-08-22 01:19:21,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:19:21,175 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf'
2026-08-22 01:19:21,197 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:19:21,206 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf'
2026-08-22 01:19:21,497 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-22 01:19:21,559 [ scc.git] DEBUG omero-dropbox | 2 +-
2026-08-22 01:19:21,559 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-08-22 01:19:21,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:19:21,757 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-08-22 01:19:21,784 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:19:21,793 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-08-22 01:19:22,086 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-22 01:19:22,146 [ scc.git] DEBUG omero-py | 2 +-
2026-08-22 01:19:22,146 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-08-22 01:19:22,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:19:22,363 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-22 01:19:22,715 [ scc.git] DEBUG Submodule path 'omero-dropbox': checked out 'ac93ed4b4a139dd73b414ead55223071fc465de5'
2026-08-22 01:19:22,982 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c'
2026-08-22 01:19:23,534 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1'
2026-08-22 01:19:24,243 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b'
2026-08-22 01:19:24,244 [ scc.git] DEBUG Get sha1 of %s
2026-08-22 01:19:24,244 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:19:24,253 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-22 01:19:24,903 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6fa57b31d0> has no local changes
2026-08-22 01:19:24,903 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
- PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
- PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
- PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
Generated by OMERO-python-superbuild-push#49 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/49/)'
2026-08-22 01:19:25,407 [ scc.git] DEBUG [detached HEAD 107f280] merge master -Dorg -Snone
2026-08-22 01:19:25,409 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2026-08-22 01:19:25,409 [ scc.merge] INFO Already up to date.
2026-08-22 01:19:25,409 [ scc.merge] INFO
2026-08-22 01:19:25,409 [ scc.merge] INFO Merged PRs:
2026-08-22 01:19:25,409 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-08-22 01:19:25,409 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-08-22 01:19:25,409 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-08-22 01:19:25,409 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-08-22 01:19:25,410 [ scc.merge] INFO
2026-08-22 01:19:25,410 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-08-22 01:19:25,410 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Submodule path 'omero-marshal': checked out 'f8ff1c2e439f0599d96423b7f64898864548ba9f'
Submodule path 'omero-py': checked out '5d0974d097e25d98892b9b419528edf9256274b0'
Submodule path 'omero-scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0'
Submodule path 'omero-web': checked out '116a77766563756a351f2ec3f6cf98550c7f2cc8'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2026-08-22 01:19:32,164 [ scc.config] DEBUG Found github.token
2026-08-22 01:19:32,167 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-08-22 01:19:32,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:19:32,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:19:33,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-08-22 01:19:33,264 [ scc.gh] DEBUG 4999 remaining from 5000 (Reset at 02:08
2026-08-22 01:19:33,264 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-22 01:19:33,277 [ scc.git] DEBUG Check current status
2026-08-22 01:19:33,277 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-22 01:19:33,299 [ scc.git] DEBUG 107f280 merge master -Dorg -Snone
2026-08-22 01:19:33,300 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-22 01:19:33,463 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4)
2026-08-22 01:19:33,504 [ scc.git] DEBUG +f8ff1c2e439f0599d96423b7f64898864548ba9f omero-marshal (v0.9.1-3-gf8ff1c2)
2026-08-22 01:19:33,570 [ scc.git] DEBUG +5d0974d097e25d98892b9b419528edf9256274b0 omero-py (v5.23.0-6-g5d0974d0)
2026-08-22 01:19:33,613 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 omero-scripts (v5.10.0-1-g5b4d768)
2026-08-22 01:19:33,673 [ scc.git] DEBUG +116a77766563756a351f2ec3f6cf98550c7f2cc8 omero-web (v5.32.0-12-g116a77766)
2026-08-22 01:19:33,684 [ scc.config] DEBUG Found remote.origin.url
2026-08-22 01:19:33,684 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2026-08-22 01:19:33,687 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2026-08-22 01:19:33,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2026-08-22 01:19:34,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-22 01:19:34,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-22 01:19:35,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-22 01:19:35,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-22 01:19:35,873 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-22 01:19:35,992 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-08-22 01:19:35,992 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-22 01:19:36,006 [ scc.git] DEBUG Check current status
2026-08-22 01:19:36,006 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-22 01:19:36,025 [ scc.git] DEBUG ac93ed4 Merge pull request #26 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0
2026-08-22 01:19:36,026 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-22 01:19:36,142 [ scc.config] DEBUG Found remote.origin.url
2026-08-22 01:19:36,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2026-08-22 01:19:36,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-22 01:19:37,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-22 01:19:37,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-22 01:19:38,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-22 01:19:38,315 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-22 01:19:38,434 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-22 01:19:38,435 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-08-22 01:19:38,435 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-22 01:19:38,448 [ scc.git] DEBUG Check current status
2026-08-22 01:19:38,448 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-22 01:19:38,471 [ scc.git] DEBUG f8ff1c2 Merge pull request #90 from sbesson/python_3.9_removal
2026-08-22 01:19:38,472 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-22 01:19:38,593 [ scc.config] DEBUG Found remote.origin.url
2026-08-22 01:19:38,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2026-08-22 01:19:39,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-22 01:19:39,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-22 01:19:40,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-22 01:19:40,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-22 01:19:40,737 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-22 01:19:40,836 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-22 01:19:40,836 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-08-22 01:19:40,836 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-22 01:19:40,848 [ scc.git] DEBUG Check current status
2026-08-22 01:19:40,849 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-22 01:19:40,875 [ scc.git] DEBUG 5d0974d0 Merge pull request #498 from sbesson/actions_upgrade
2026-08-22 01:19:40,877 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-22 01:19:40,985 [ scc.config] DEBUG Found remote.origin.url
2026-08-22 01:19:41,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2026-08-22 01:19:41,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-22 01:19:42,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-22 01:19:42,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-22 01:19:43,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-22 01:19:43,160 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-22 01:19:43,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-22 01:19:43,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-08-22 01:19:43,254 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-22 01:19:43,264 [ scc.git] DEBUG Check current status
2026-08-22 01:19:43,264 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-22 01:19:43,282 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0
2026-08-22 01:19:43,283 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-22 01:19:43,384 [ scc.config] DEBUG Found remote.origin.url
2026-08-22 01:19:43,384 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2026-08-22 01:19:43,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2026-08-22 01:19:44,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-22 01:19:44,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-22 01:19:45,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-22 01:19:45,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-22 01:19:45,571 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-22 01:19:45,669 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-22 01:19:45,670 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-08-22 01:19:45,670 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-22 01:19:45,683 [ scc.git] DEBUG Check current status
2026-08-22 01:19:45,683 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-22 01:19:45,708 [ scc.git] DEBUG 116a77766 Merge pull request #683 from will-moore/post_data_saveImgRDef
2026-08-22 01:19:45,709 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-22 01:19:45,817 [ scc.config] DEBUG Found remote.origin.url
2026-08-22 01:19:46,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2026-08-22 01:19:46,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-22 01:19:47,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-22 01:19:47,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-22 01:19:47,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-22 01:19:47,998 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-22 01:19:48,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-22 01:19:48,102 [ scc.git] DEBUG Resetting...
2026-08-22 01:19:48,102 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-08-22 01:19:48,290 [ scc.git] DEBUG HEAD is now at 107f280 merge master -Dorg -Snone
2026-08-22 01:19:48,291 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-08-22 01:19:48,705 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c'
2026-08-22 01:19:49,213 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1'
2026-08-22 01:19:49,715 [ scc.git] DEBUG Submodule path 'omero-scripts': checked out '03b9116196e1a799dd18a666559613d912be01a5'
2026-08-22 01:19:50,667 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b'
2026-08-22 01:19:50,689 [ scc.git] DEBUG Check current status
2026-08-22 01:19:50,689 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-22 01:19:50,708 [ scc.git] DEBUG 107f280 merge master -Dorg -Snone
2026-08-22 01:19:50,708 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-22 01:19:50,826 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4)
2026-08-22 01:19:50,860 [ scc.git] DEBUG a3dd99b825ad44c9beadc38a8ae8ba94a155f62c omero-marshal (v0.9.0-18-ga3dd99b)
2026-08-22 01:19:50,913 [ scc.git] DEBUG b44120b5235b24db6dde315369ea1519bbeb30c1 omero-py (v5.21.2-3-gb44120b5)
2026-08-22 01:19:50,951 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-08-22 01:19:50,981 [ scc.git] DEBUG 675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b omero-web (v5.29.3-1-g675d57fd7)
2026-08-22 01:19:50,981 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-08-22 01:19:50,982 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-08-22 01:19:50,982 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-08-22 01:19:50,982 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-08-22 01:19:50,982 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-08-22 01:19:50,982 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2026-08-22 01:19:50,982 [ scc.repo] DEBUG ## PRs found:
2026-08-22 01:19:51,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2026-08-22 01:19:51,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None
2026-08-22 01:19:51,993 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-22 01:19:52,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None
2026-08-22 01:19:53,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-22 01:19:53,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None
2026-08-22 01:19:54,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?per_page=1 HTTP/1.1" 200 2
2026-08-22 01:19:54,205 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-08-22 01:19:54,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None
2026-08-22 01:19:54,704 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-22 01:19:55,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None
2026-08-22 01:19:55,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-22 01:19:56,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None
2026-08-22 01:19:56,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/09050892c054f3697fd3604d05ce68b65af6dedf?per_page=1 HTTP/1.1" 200 2
2026-08-22 01:19:56,871 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-08-22 01:19:57,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None
2026-08-22 01:19:57,408 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-22 01:19:58,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None
2026-08-22 01:19:58,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-22 01:19:59,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None
2026-08-22 01:19:59,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/7632acc02b92ba91ed954701ac52de2732a56daa?per_page=1 HTTP/1.1" 200 2
2026-08-22 01:19:59,558 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-08-22 01:20:00,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None
2026-08-22 01:20:00,056 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-22 01:20:00,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None
2026-08-22 01:20:01,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-22 01:20:01,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None
2026-08-22 01:20:02,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/e5077065e3781e634471b4828f120f18c16dad1c?per_page=1 HTTP/1.1" 200 2
2026-08-22 01:20:02,286 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-08-22 01:20:02,286 [ scc.repo] DEBUG ## Branches found:
2026-08-22 01:20:02,286 [ scc.git] DEBUG Get sha1 of %s
2026-08-22 01:20:02,286 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:20:02,298 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-22 01:20:02,312 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-22 01:20:02,312 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-22 01:20:02,332 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-22 01:20:02,393 [ scc.git] DEBUG Already up to date.
2026-08-22 01:20:02,393 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head'
2026-08-22 01:20:03,327 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-22 01:20:03,327 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD
2026-08-22 01:20:03,355 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2026-08-22 01:20:03,823 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-22 01:20:03,823 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2026-08-22 01:20:03,852 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head'
2026-08-22 01:20:04,304 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-22 01:20:04,304 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD
2026-08-22 01:20:04,329 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head'
2026-08-22 01:20:04,790 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-22 01:20:04,790 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD
2026-08-22 01:20:04,814 [ scc.git] DEBUG ## Unique users: []
2026-08-22 01:20:04,814 [ scc.git] DEBUG Get sha1 of %s
2026-08-22 01:20:04,814 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:20:04,824 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c'
2026-08-22 01:20:04,846 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:20:04,856 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c'
2026-08-22 01:20:04,899 [ scc.git] DEBUG Already up to date.
2026-08-22 01:20:05,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:20:05,088 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa'
2026-08-22 01:20:05,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:20:05,123 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa'
2026-08-22 01:20:05,172 [ scc.git] DEBUG Already up to date.
2026-08-22 01:20:05,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:20:05,551 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf'
2026-08-22 01:20:05,579 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:20:05,588 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf'
2026-08-22 01:20:05,635 [ scc.git] DEBUG Already up to date.
2026-08-22 01:20:05,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:20:05,987 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-08-22 01:20:06,013 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:20:06,022 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-08-22 01:20:06,070 [ scc.git] DEBUG Already up to date.
2026-08-22 01:20:06,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:20:06,423 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-22 01:20:06,664 [ scc.git] DEBUG Get sha1 of %s
2026-08-22 01:20:06,664 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:20:06,674 [ scc.repo] DEBUG ## PRs found:
2026-08-22 01:20:06,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 2
2026-08-22 01:20:06,905 [ scc.repo] DEBUG ## Branches found:
2026-08-22 01:20:06,905 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-08-22 01:20:06,905 [ scc.git] DEBUG Get sha1 of %s
2026-08-22 01:20:06,905 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:20:06,921 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-22 01:20:06,942 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-22 01:20:06,942 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-22 01:20:06,962 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-22 01:20:07,022 [ scc.git] DEBUG Already up to date.
2026-08-22 01:20:07,022 [ scc.git] DEBUG ## Unique users: []
2026-08-22 01:20:07,022 [ scc.git] DEBUG Get sha1 of %s
2026-08-22 01:20:07,022 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:20:07,040 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-22 01:20:07,146 [ scc.git] DEBUG Get sha1 of %s
2026-08-22 01:20:07,147 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:20:07,160 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-22 01:20:07,261 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-22 01:20:07,305 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5575eb0250> has no local changes
2026-08-22 01:20:07,305 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Generated by OMERO-python-superbuild-push#49 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/49/)'
2026-08-22 01:20:07,444 [ scc.git] DEBUG [detached HEAD f4614c0] merge master -Dorg -Ssuccess-only
2026-08-22 01:20:07,446 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-22 01:20:07,446 [ scc.repo] DEBUG ## PRs found:
2026-08-22 01:20:07,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2026-08-22 01:20:08,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None
2026-08-22 01:20:08,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None
2026-08-22 01:20:09,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2026-08-22 01:20:09,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2026-08-22 01:20:10,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2026-08-22 01:20:10,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2026-08-22 01:20:10,803 [ scc.repo] DEBUG ## Branches found:
2026-08-22 01:20:10,803 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-08-22 01:20:10,803 [ scc.git] DEBUG Get sha1 of %s
2026-08-22 01:20:10,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:20:10,821 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-22 01:20:10,837 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-22 01:20:10,837 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-22 01:20:10,859 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-22 01:20:11,146 [ scc.git] DEBUG Updating a3dd99b..f8ff1c2
2026-08-22 01:20:11,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/90 HTTP/1.1" 200 None
2026-08-22 01:20:12,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/89 HTTP/1.1" 200 None
2026-08-22 01:20:13,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/69 HTTP/1.1" 200 None
2026-08-22 01:20:14,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/88 HTTP/1.1" 200 None
2026-08-22 01:20:14,229 [ scc.git] DEBUG ## Unique users: []
2026-08-22 01:20:14,229 [ scc.git] DEBUG Get sha1 of %s
2026-08-22 01:20:14,229 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:20:14,251 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-22 01:20:14,367 [ scc.git] DEBUG Get sha1 of %s
2026-08-22 01:20:14,367 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:20:14,380 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-22 01:20:14,482 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-22 01:20:14,589 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5576358850> has no local changes
2026-08-22 01:20:14,589 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Updating a3dd99b..f8ff1c2
Previously merged:
- PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
- PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
- PR 69 will-moore 'Roi encoder allows Shape None'
- PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
Generated by OMERO-python-superbuild-push#49 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/49/)'
2026-08-22 01:20:14,759 [ scc.git] DEBUG [detached HEAD 3e3a36d] merge master -Dorg -Ssuccess-only
2026-08-22 01:20:14,761 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-22 01:20:14,761 [ scc.repo] DEBUG ## PRs found:
2026-08-22 01:20:15,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2026-08-22 01:20:15,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/489 HTTP/1.1" 200 None
2026-08-22 01:20:16,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/489/comments HTTP/1.1" 200 None
2026-08-22 01:20:16,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/80cdacd6835aa00f8fa81f9f18212b072f6e1884?page=1 HTTP/1.1" 200 None
2026-08-22 01:20:17,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/80cdacd6835aa00f8fa81f9f18212b072f6e1884/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-22 01:20:17,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/80cdacd6835aa00f8fa81f9f18212b072f6e1884/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-22 01:20:18,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/80cdacd6835aa00f8fa81f9f18212b072f6e1884?page=1 HTTP/1.1" 200 None
2026-08-22 01:20:18,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/80cdacd6835aa00f8fa81f9f18212b072f6e1884?per_page=1 HTTP/1.1" 200 None
2026-08-22 01:20:19,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/80cdacd6835aa00f8fa81f9f18212b072f6e1884?page=1 HTTP/1.1" 200 None
2026-08-22 01:20:19,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/80cdacd6835aa00f8fa81f9f18212b072f6e1884/status HTTP/1.1" 200 None
2026-08-22 01:20:19,885 [ scc.repo] DEBUG - PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
2026-08-22 01:20:20,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None
2026-08-22 01:20:20,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None
2026-08-22 01:20:21,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None
2026-08-22 01:20:21,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459/comments HTTP/1.1" 200 None
2026-08-22 01:20:22,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2026-08-22 01:20:22,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None
2026-08-22 01:20:23,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None
2026-08-22 01:20:24,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-22 01:20:24,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None
2026-08-22 01:20:25,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2
2026-08-22 01:20:25,024 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2026-08-22 01:20:25,024 [ scc.repo] DEBUG ## Branches found:
2026-08-22 01:20:25,024 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-08-22 01:20:25,026 [ scc.git] DEBUG Get sha1 of %s
2026-08-22 01:20:25,026 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:20:25,041 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-22 01:20:25,061 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-22 01:20:25,061 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-22 01:20:25,133 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-22 01:20:25,947 [ scc.git] DEBUG Updating b44120b5..5d0974d0
2026-08-22 01:20:26,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/498 HTTP/1.1" 200 None
2026-08-22 01:20:27,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/495 HTTP/1.1" 200 None
2026-08-22 01:20:28,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/496 HTTP/1.1" 200 None
2026-08-22 01:20:28,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/199 HTTP/1.1" 200 None
2026-08-22 01:20:29,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/492 HTTP/1.1" 200 None
2026-08-22 01:20:30,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/493 HTTP/1.1" 200 None
2026-08-22 01:20:31,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/491 HTTP/1.1" 200 None
2026-08-22 01:20:32,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/490 HTTP/1.1" 200 None
2026-08-22 01:20:33,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/483 HTTP/1.1" 200 None
2026-08-22 01:20:33,168 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2026-08-22 01:20:33,835 [ scc.git] DEBUG From https://github.com/ome/omero-py
2026-08-22 01:20:33,835 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2026-08-22 01:20:33,866 [ scc.git] DEBUG Calling 'git fetch origin pull/489/head'
2026-08-22 01:20:34,334 [ scc.git] DEBUG From https://github.com/ome/omero-py
2026-08-22 01:20:34,334 [ scc.git] DEBUG * branch refs/pull/489/head -> FETCH_HEAD
2026-08-22 01:20:34,357 [ scc.git] DEBUG ## Unique users: []
2026-08-22 01:20:34,357 [ scc.git] DEBUG Get sha1 of %s
2026-08-22 01:20:34,357 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:20:34,370 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2026-08-22 01:20:34,423 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:20:34,436 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2026-08-22 01:20:34,750 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2026-08-22 01:20:34,815 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-22 01:20:34,904 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2026-08-22 01:20:34,905 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2026-08-22 01:20:35,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:20:35,103 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...80cdacd6835aa00f8fa81f9f18212b072f6e1884'
2026-08-22 01:20:35,157 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:20:35,170 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 489 (Add more opts support for getObjects('Annotation')) 80cdacd6835aa00f8fa81f9f18212b072f6e1884'
2026-08-22 01:20:35,659 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2026-08-22 01:20:35,721 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-22 01:20:35,806 [ scc.git] DEBUG src/omero/gateway/__init__.py | 290 ++++++++++++++++--------------------------
2026-08-22 01:20:35,806 [ scc.git] DEBUG 1 file changed, 109 insertions(+), 181 deletions(-)
2026-08-22 01:20:35,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:20:35,998 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-22 01:20:36,119 [ scc.git] DEBUG Get sha1 of %s
2026-08-22 01:20:36,119 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:20:36,133 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-22 01:20:36,242 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-22 01:20:36,412 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5575eeba90> has no local changes
2026-08-22 01:20:36,412 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
- PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
Updating b44120b5..5d0974d0
Previously merged:
- PR 498 sbesson 'Upgrade GitHub actions'
- PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
- PR 496 will-moore 'Fix ice-3.6 download link in README'
- PR 199 joshmoore 'user: allow setting default group'
- PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
- PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
- PR 491 kkoz 'First pass at better cleanse dry-run output'
- PR 490 sbesson 'Remove support from Python 3.9'
- PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
Merged PRs:
- PR 391 joshmoore 'Add jstack command'
- PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
Generated by OMERO-python-superbuild-push#49 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/49/)'
2026-08-22 01:20:36,705 [ scc.git] DEBUG [detached HEAD b7df7354] merge master -Dorg -Ssuccess-only
2026-08-22 01:20:36,707 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-22 01:20:36,708 [ scc.git] INFO Overriding base-branch from master to develop
2026-08-22 01:20:36,708 [ scc.repo] DEBUG ## PRs found:
2026-08-22 01:20:37,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2026-08-22 01:20:37,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/232 HTTP/1.1" 200 None
2026-08-22 01:20:38,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None
2026-08-22 01:20:38,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-22 01:20:39,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-22 01:20:39,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None
2026-08-22 01:20:40,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/e190baa635f40826befc84321719243092ee849f?per_page=1 HTTP/1.1" 200 2
2026-08-22 01:20:40,145 [ scc.repo] DEBUG - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
2026-08-22 01:20:40,145 [ scc.repo] DEBUG ## Branches found:
2026-08-22 01:20:40,145 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-08-22 01:20:40,146 [ scc.git] DEBUG Get sha1 of %s
2026-08-22 01:20:40,146 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:20:40,166 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2026-08-22 01:20:40,186 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-22 01:20:40,186 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2026-08-22 01:20:40,214 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2026-08-22 01:20:40,471 [ scc.git] DEBUG Updating 03b9116..5b4d768
2026-08-22 01:20:41,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None
2026-08-22 01:20:41,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None
2026-08-22 01:20:42,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None
2026-08-22 01:20:43,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None
2026-08-22 01:20:43,517 [ scc.git] DEBUG Calling 'git fetch origin pull/232/head'
2026-08-22 01:20:44,146 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2026-08-22 01:20:44,146 [ scc.git] DEBUG * branch refs/pull/232/head -> FETCH_HEAD
2026-08-22 01:20:44,166 [ scc.git] DEBUG ## Unique users: []
2026-08-22 01:20:44,166 [ scc.git] DEBUG Get sha1 of %s
2026-08-22 01:20:44,166 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:20:44,179 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e190baa635f40826befc84321719243092ee849f'
2026-08-22 01:20:44,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:20:44,222 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 232 (Add Auto header detection to `Populate_Metadata.py`) e190baa635f40826befc84321719243092ee849f'
2026-08-22 01:20:44,437 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-22 01:20:44,500 [ scc.git] DEBUG omero/import_scripts/Populate_Metadata.py | 26 ++++++++++++++++++++++++--
2026-08-22 01:20:44,500 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-)
2026-08-22 01:20:44,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:20:44,707 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-22 01:20:44,825 [ scc.git] DEBUG Get sha1 of %s
2026-08-22 01:20:44,825 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:20:44,836 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-22 01:20:44,958 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-22 01:20:45,018 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5576178dd0> has no local changes
2026-08-22 01:20:45,018 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Updating 03b9116..5b4d768
Previously merged:
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
Merged PRs:
- PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
Generated by OMERO-python-superbuild-push#49 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/49/)'
2026-08-22 01:20:45,215 [ scc.git] DEBUG [detached HEAD ff70fd1] merge master -Dorg -Ssuccess-only
2026-08-22 01:20:45,217 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-22 01:20:45,217 [ scc.repo] DEBUG ## PRs found:
2026-08-22 01:20:45,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2026-08-22 01:20:46,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/685 HTTP/1.1" 200 None
2026-08-22 01:20:46,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630?page=1 HTTP/1.1" 200 None
2026-08-22 01:20:47,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-22 01:20:47,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-22 01:20:48,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630?page=1 HTTP/1.1" 200 None
2026-08-22 01:20:48,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/72461e7c571d3d45c668c1827baaa562eb007630?per_page=1 HTTP/1.1" 200 None
2026-08-22 01:20:49,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630?page=1 HTTP/1.1" 200 None
2026-08-22 01:20:49,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630/status HTTP/1.1" 200 None
2026-08-22 01:20:49,689 [ scc.repo] DEBUG - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
2026-08-22 01:20:50,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684 HTTP/1.1" 200 None
2026-08-22 01:20:52,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684/comments HTTP/1.1" 200 None
2026-08-22 01:20:52,114 [ scc.repo] DEBUG # ... Include label: include
2026-08-22 01:20:52,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-08-22 01:20:53,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-22 01:20:53,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-22 01:20:54,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-08-22 01:20:54,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?per_page=1 HTTP/1.1" 200 None
2026-08-22 01:20:55,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-08-22 01:20:55,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/status HTTP/1.1" 200 None
2026-08-22 01:20:55,616 [ scc.repo] DEBUG - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
2026-08-22 01:20:56,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682 HTTP/1.1" 200 None
2026-08-22 01:20:56,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682/comments HTTP/1.1" 200 None
2026-08-22 01:20:57,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/54286f44fb13954e8e6d0f0dc3c069d4776756bf?page=1 HTTP/1.1" 200 None
2026-08-22 01:20:57,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/54286f44fb13954e8e6d0f0dc3c069d4776756bf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-22 01:20:58,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/54286f44fb13954e8e6d0f0dc3c069d4776756bf/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-22 01:20:58,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/54286f44fb13954e8e6d0f0dc3c069d4776756bf?page=1 HTTP/1.1" 200 None
2026-08-22 01:20:59,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/54286f44fb13954e8e6d0f0dc3c069d4776756bf?per_page=1 HTTP/1.1" 200 None
2026-08-22 01:20:59,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/54286f44fb13954e8e6d0f0dc3c069d4776756bf?page=1 HTTP/1.1" 200 None
2026-08-22 01:21:00,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/54286f44fb13954e8e6d0f0dc3c069d4776756bf/status HTTP/1.1" 200 None
2026-08-22 01:21:00,199 [ scc.repo] DEBUG - PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
2026-08-22 01:21:00,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/677 HTTP/1.1" 200 None
2026-08-22 01:21:01,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/677/comments HTTP/1.1" 200 None
2026-08-22 01:21:01,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-08-22 01:21:02,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-22 01:21:02,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-22 01:21:03,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-08-22 01:21:03,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?per_page=1 HTTP/1.1" 200 None
2026-08-22 01:21:04,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-08-22 01:21:04,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/status HTTP/1.1" 200 None
2026-08-22 01:21:04,952 [ scc.repo] DEBUG - PR 677 will-moore 'Add table_histogram endpoint'
2026-08-22 01:21:05,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/644 HTTP/1.1" 200 None
2026-08-22 01:21:05,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/644/comments HTTP/1.1" 200 None
2026-08-22 01:21:06,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-08-22 01:21:07,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-22 01:21:07,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-22 01:21:08,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-08-22 01:21:08,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?per_page=1 HTTP/1.1" 200 None
2026-08-22 01:21:09,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-08-22 01:21:09,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/status HTTP/1.1" 200 None
2026-08-22 01:21:09,512 [ scc.repo] DEBUG - PR 644 jo-mueller 'Add some install instructions for windows'
2026-08-22 01:21:10,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643 HTTP/1.1" 200 None
2026-08-22 01:21:10,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643/comments HTTP/1.1" 200 None
2026-08-22 01:21:11,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-08-22 01:21:11,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-22 01:21:12,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-22 01:21:12,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-08-22 01:21:12,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1122646161dfcf0118e5940417b3c04a9568f93e?per_page=1 HTTP/1.1" 200 None
2026-08-22 01:21:13,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-08-22 01:21:13,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/status HTTP/1.1" 200 None
2026-08-22 01:21:13,986 [ scc.repo] DEBUG - PR 643 will-moore 'Don't disable the histogram for big images'
2026-08-22 01:21:14,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638 HTTP/1.1" 200 None
2026-08-22 01:21:15,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638/comments HTTP/1.1" 200 None
2026-08-22 01:21:15,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None
2026-08-22 01:21:16,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None
2026-08-22 01:21:16,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-08-22 01:21:17,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-22 01:21:17,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-22 01:21:18,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-08-22 01:21:18,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None
2026-08-22 01:21:19,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-08-22 01:21:19,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None
2026-08-22 01:21:19,606 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf'
2026-08-22 01:21:20,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None
2026-08-22 01:21:20,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602/comments HTTP/1.1" 200 None
2026-08-22 01:21:21,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539?page=1 HTTP/1.1" 200 None
2026-08-22 01:21:21,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-22 01:21:22,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539?page=1 HTTP/1.1" 200 None
2026-08-22 01:21:22,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 2
2026-08-22 01:21:22,530 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations'
2026-08-22 01:21:22,530 [ scc.repo] DEBUG ## Branches found:
2026-08-22 01:21:22,530 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-08-22 01:21:22,532 [ scc.git] DEBUG Get sha1 of %s
2026-08-22 01:21:22,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:21:22,560 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-22 01:21:22,578 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-22 01:21:22,578 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-22 01:21:22,629 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-22 01:21:23,697 [ scc.git] DEBUG Updating 675d57fd7..116a77766
2026-08-22 01:21:24,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/683 HTTP/1.1" 200 None
2026-08-22 01:21:25,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/681 HTTP/1.1" 200 None
2026-08-22 01:21:25,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/679 HTTP/1.1" 200 None
2026-08-22 01:21:26,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/676 HTTP/1.1" 200 None
2026-08-22 01:21:27,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/675 HTTP/1.1" 200 None
2026-08-22 01:21:28,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/613 HTTP/1.1" 200 None
2026-08-22 01:21:28,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/670 HTTP/1.1" 200 None
2026-08-22 01:21:29,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/667 HTTP/1.1" 200 None
2026-08-22 01:21:30,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/666 HTTP/1.1" 200 None
2026-08-22 01:21:31,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/655 HTTP/1.1" 200 None
2026-08-22 01:21:32,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/665 HTTP/1.1" 200 None
2026-08-22 01:21:32,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/664 HTTP/1.1" 200 None
2026-08-22 01:21:33,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/658 HTTP/1.1" 200 None
2026-08-22 01:21:34,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/656 HTTP/1.1" 200 None
2026-08-22 01:21:35,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/653 HTTP/1.1" 200 None
2026-08-22 01:21:35,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/646 HTTP/1.1" 200 None
2026-08-22 01:21:36,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/639 HTTP/1.1" 200 None
2026-08-22 01:21:37,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/662 HTTP/1.1" 200 None
2026-08-22 01:21:38,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/651 HTTP/1.1" 200 None
2026-08-22 01:21:39,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/650 HTTP/1.1" 200 None
2026-08-22 01:21:39,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/649 HTTP/1.1" 200 None
2026-08-22 01:21:40,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/648 HTTP/1.1" 200 None
2026-08-22 01:21:41,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/647 HTTP/1.1" 200 None
2026-08-22 01:21:42,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/645 HTTP/1.1" 200 None
2026-08-22 01:21:42,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/637 HTTP/1.1" 200 None
2026-08-22 01:21:43,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/629 HTTP/1.1" 200 None
2026-08-22 01:21:44,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/628 HTTP/1.1" 200 None
2026-08-22 01:21:45,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/619 HTTP/1.1" 200 None
2026-08-22 01:21:46,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/612 HTTP/1.1" 200 None
2026-08-22 01:21:46,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/534 HTTP/1.1" 200 None
2026-08-22 01:21:46,890 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head'
2026-08-22 01:21:47,422 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-22 01:21:47,422 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD
2026-08-22 01:21:47,456 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head'
2026-08-22 01:21:48,181 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-22 01:21:48,181 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD
2026-08-22 01:21:48,212 [ scc.git] DEBUG Calling 'git fetch origin pull/643/head'
2026-08-22 01:21:48,890 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-22 01:21:48,890 [ scc.git] DEBUG * branch refs/pull/643/head -> FETCH_HEAD
2026-08-22 01:21:48,920 [ scc.git] DEBUG Calling 'git fetch origin pull/644/head'
2026-08-22 01:21:49,520 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-22 01:21:49,520 [ scc.git] DEBUG * branch refs/pull/644/head -> FETCH_HEAD
2026-08-22 01:21:49,555 [ scc.git] DEBUG Calling 'git fetch origin pull/677/head'
2026-08-22 01:21:50,173 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-22 01:21:50,173 [ scc.git] DEBUG * branch refs/pull/677/head -> FETCH_HEAD
2026-08-22 01:21:50,200 [ scc.git] DEBUG Calling 'git fetch origin pull/682/head'
2026-08-22 01:21:50,944 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-22 01:21:50,944 [ scc.git] DEBUG * branch refs/pull/682/head -> FETCH_HEAD
2026-08-22 01:21:50,974 [ scc.git] DEBUG Calling 'git fetch origin pull/684/head'
2026-08-22 01:21:51,694 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-22 01:21:51,694 [ scc.git] DEBUG * branch refs/pull/684/head -> FETCH_HEAD
2026-08-22 01:21:51,723 [ scc.git] DEBUG Calling 'git fetch origin pull/685/head'
2026-08-22 01:21:52,266 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-22 01:21:52,266 [ scc.git] DEBUG * branch refs/pull/685/head -> FETCH_HEAD
2026-08-22 01:21:52,295 [ scc.git] DEBUG ## Unique users: []
2026-08-22 01:21:52,296 [ scc.git] DEBUG Get sha1 of %s
2026-08-22 01:21:52,296 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:21:52,312 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539'
2026-08-22 01:21:52,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:21:52,377 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539'
2026-08-22 01:21:53,031 [ scc.git] DEBUG Auto-merging omeroweb/webclient/static/webclient/css/dusty.css
2026-08-22 01:21:53,120 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-22 01:21:53,212 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 -
2026-08-22 01:21:53,212 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++--
2026-08-22 01:21:53,212 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++-
2026-08-22 01:21:53,212 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +-
2026-08-22 01:21:53,212 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++-
2026-08-22 01:21:53,212 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++--
2026-08-22 01:21:53,212 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++--
2026-08-22 01:21:53,212 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++-----
2026-08-22 01:21:53,212 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 +
2026-08-22 01:21:53,212 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +-
2026-08-22 01:21:53,212 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++--
2026-08-22 01:21:53,212 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-)
2026-08-22 01:21:53,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:21:53,413 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2026-08-22 01:21:53,487 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:21:53,503 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2026-08-22 01:21:53,871 [ scc.git] DEBUG Auto-merging omeroweb/webclient/controller/container.py
2026-08-22 01:21:53,871 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2026-08-22 01:21:53,950 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-22 01:21:54,046 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------
2026-08-22 01:21:54,046 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +---
2026-08-22 01:21:54,046 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 -----------------
2026-08-22 01:21:54,046 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-)
2026-08-22 01:21:54,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:21:54,229 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122646161dfcf0118e5940417b3c04a9568f93e'
2026-08-22 01:21:54,320 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:21:54,338 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 643 (Don't disable the histogram for big images) 1122646161dfcf0118e5940417b3c04a9568f93e'
2026-08-22 01:21:54,679 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2026-08-22 01:21:54,756 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-22 01:21:54,870 [ scc.git] DEBUG .../templates/webclient/annotations/metadata_preview.html | 8 ++++----
2026-08-22 01:21:54,870 [ scc.git] DEBUG omeroweb/webgateway/static/webgateway/js/ome.histogram.js | 4 ++++
2026-08-22 01:21:54,870 [ scc.git] DEBUG omeroweb/webgateway/views.py | 4 +---
2026-08-22 01:21:54,870 [ scc.git] DEBUG 3 files changed, 9 insertions(+), 7 deletions(-)
2026-08-22 01:21:55,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:21:55,051 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1beaa97e6086aaf1e1f8e6147f93dcef722be4f3'
2026-08-22 01:21:55,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:21:55,143 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 644 (Add some install instructions for windows) 1beaa97e6086aaf1e1f8e6147f93dcef722be4f3'
2026-08-22 01:21:55,444 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-22 01:21:55,518 [ scc.git] DEBUG README.rst | 50 ++++++++++++++++++++++++++++++++++++++++++++------
2026-08-22 01:21:55,518 [ scc.git] DEBUG 1 file changed, 44 insertions(+), 6 deletions(-)
2026-08-22 01:21:55,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:21:55,703 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7'
2026-08-22 01:21:56,202 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:21:56,214 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 677 (Add table_histogram endpoint) 1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7'
2026-08-22 01:21:56,464 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2026-08-22 01:21:56,545 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-22 01:21:56,627 [ scc.git] DEBUG omeroweb/webgateway/urls.py | 11 +++++
2026-08-22 01:21:56,627 [ scc.git] DEBUG omeroweb/webgateway/views.py | 108 +++++++++++++++++++++++++++++++++++++++----
2026-08-22 01:21:56,628 [ scc.git] DEBUG 2 files changed, 109 insertions(+), 10 deletions(-)
2026-08-22 01:21:56,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:21:56,844 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...54286f44fb13954e8e6d0f0dc3c069d4776756bf'
2026-08-22 01:21:56,939 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:21:56,955 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 682 (Initial support for JSON api /annotations endpoint) 54286f44fb13954e8e6d0f0dc3c069d4776756bf'
2026-08-22 01:21:57,280 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-22 01:21:57,350 [ scc.git] DEBUG omeroweb/api/urls.py | 22 +++++++++++
2026-08-22 01:21:57,350 [ scc.git] DEBUG omeroweb/api/views.py | 100 +++++++++++++++++++++++++++++++++++++++++++++++++-
2026-08-22 01:21:57,350 [ scc.git] DEBUG 2 files changed, 121 insertions(+), 1 deletion(-)
2026-08-22 01:21:57,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:21:57,545 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8dbf1c22784a7faaa1db2ff9d5150edbc823e575'
2026-08-22 01:21:57,639 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:21:57,651 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 684 (add config "omero.web.annotation_order") 8dbf1c22784a7faaa1db2ff9d5150edbc823e575'
2026-08-22 01:21:57,982 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-22 01:21:58,054 [ scc.git] DEBUG omeroweb/settings.py | 21 +++++++++++++++++++++
2026-08-22 01:21:58,054 [ scc.git] DEBUG omeroweb/webclient/tree.py | 27 ++++++++++++++++++++++++++-
2026-08-22 01:21:58,054 [ scc.git] DEBUG 2 files changed, 47 insertions(+), 1 deletion(-)
2026-08-22 01:21:58,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:21:58,236 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...72461e7c571d3d45c668c1827baaa562eb007630'
2026-08-22 01:21:58,333 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:21:58,349 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 685 (Prepare chgrp 'update' response before chgrp submission) 72461e7c571d3d45c668c1827baaa562eb007630'
2026-08-22 01:21:58,743 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2026-08-22 01:21:58,822 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-22 01:21:58,890 [ scc.git] DEBUG omeroweb/webclient/views.py | 80 +++++++++++++++++++++++----------------------
2026-08-22 01:21:58,890 [ scc.git] DEBUG 1 file changed, 41 insertions(+), 39 deletions(-)
2026-08-22 01:21:59,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:21:59,081 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-22 01:21:59,192 [ scc.git] DEBUG Get sha1 of %s
2026-08-22 01:21:59,192 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-22 01:21:59,205 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-22 01:21:59,303 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-22 01:21:59,443 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f557616b790> has no local changes
2026-08-22 01:21:59,443 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
Updating 675d57fd7..116a77766
Previously merged:
- PR 683 will-moore 'Post data save imgRdef'
- PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
- PR 679 knabar 'Allow POST requests from public user for specific URLs'
- PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
- PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 613 will-moore 'externalInfo display'
- PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
- PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
- PR 655 will-moore 'Handle invalid group id in switch_active_group'
- PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
- PR 664 knabar 'Pin django-pipeline to a recent version'
- PR 658 will-moore 'Description scrollable if taller than 350px'
- PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
- PR 646 knabar 'Force Django 5.2 in next release'
- PR 639 Rdornier 'Split view user label'
- PR 662 jburel 'Add gunicorn doc links'
- PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
- PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
- PR 648 will-moore 'hide scrollbar for top-links'
- PR 647 jburel 'Replace manual changelog by automated GH release step'
- PR 645 knabar 'Update changelog for 5.30.0 release'
- PR 637 knabar 'Upgrade to Django 5.2 '
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 628 jburel 'Add protocol required since Django4'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Merged PRs:
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 643 will-moore 'Don't disable the histogram for big images'
- PR 644 jo-mueller 'Add some install instructions for windows'
- PR 677 will-moore 'Add table_histogram endpoint'
- PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
- PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
- PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
Generated by OMERO-python-superbuild-push#49 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/49/)'
2026-08-22 01:21:59,628 [ scc.git] DEBUG [detached HEAD 7549cdaa1] merge master -Dorg -Ssuccess-only
2026-08-22 01:21:59,630 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-22 01:21:59,630 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-22 01:21:59,794 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2026-08-22 01:21:59,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:22:00,016 [ scc.config] DEBUG Found submodule.omero-marshal.url
2026-08-22 01:22:00,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:22:00,477 [ scc.config] DEBUG Found submodule.omero-py.url
2026-08-22 01:22:00,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:22:00,915 [ scc.config] DEBUG Found submodule.omero-scripts.url
2026-08-22 01:22:01,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:22:01,553 [ scc.config] DEBUG Found submodule.omero-web.url
2026-08-22 01:22:02,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-22 01:22:02,041 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-22 01:22:02,723 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5577f4f2d0> has local changes
2026-08-22 01:22:02,723 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
- PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
- PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
- PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
Repository: ome/omero-dropbox
Already up to date.
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Updating a3dd99b..f8ff1c2
Previously merged:
- PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
- PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
- PR 69 will-moore 'Roi encoder allows Shape None'
- PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
- PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
Updating b44120b5..5d0974d0
Previously merged:
- PR 498 sbesson 'Upgrade GitHub actions'
- PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
- PR 496 will-moore 'Fix ice-3.6 download link in README'
- PR 199 joshmoore 'user: allow setting default group'
- PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
- PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
- PR 491 kkoz 'First pass at better cleanse dry-run output'
- PR 490 sbesson 'Remove support from Python 3.9'
- PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
Merged PRs:
- PR 391 joshmoore 'Add jstack command'
- PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
Repository: ome/omero-scripts
Updating 03b9116..5b4d768
Previously merged:
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
Merged PRs:
- PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
Repository: ome/omero-web
Excluded PRs:
- PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
Updating 675d57fd7..116a77766
Previously merged:
- PR 683 will-moore 'Post data save imgRdef'
- PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
- PR 679 knabar 'Allow POST requests from public user for specific URLs'
- PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
- PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 613 will-moore 'externalInfo display'
- PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
- PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
- PR 655 will-moore 'Handle invalid group id in switch_active_group'
- PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
- PR 664 knabar 'Pin django-pipeline to a recent version'
- PR 658 will-moore 'Description scrollable if taller than 350px'
- PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
- PR 646 knabar 'Force Django 5.2 in next release'
- PR 639 Rdornier 'Split view user label'
- PR 662 jburel 'Add gunicorn doc links'
- PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
- PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
- PR 648 will-moore 'hide scrollbar for top-links'
- PR 647 jburel 'Replace manual changelog by automated GH release step'
- PR 645 knabar 'Update changelog for 5.30.0 release'
- PR 637 knabar 'Upgrade to Django 5.2 '
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 628 jburel 'Add protocol required since Django4'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Merged PRs:
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 643 will-moore 'Don't disable the histogram for big images'
- PR 644 jo-mueller 'Add some install instructions for windows'
- PR 677 will-moore 'Add table_histogram endpoint'
- PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
- PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
- PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
Generated by OMERO-python-superbuild-push#49 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/49/)'
2026-08-22 01:22:03,002 [ scc.git] DEBUG [detached HEAD 3aee081] merge master -Dorg -Ssuccess-only
2026-08-22 01:22:03,002 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2026-08-22 01:22:03,003 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2026-08-22 01:22:03,003 [ scc.merge] INFO Already up to date.
2026-08-22 01:22:03,003 [ scc.merge] INFO
2026-08-22 01:22:03,003 [ scc.merge] INFO Merged PRs:
2026-08-22 01:22:03,003 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-08-22 01:22:03,003 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-08-22 01:22:03,003 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-08-22 01:22:03,003 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-08-22 01:22:03,004 [ scc.merge] INFO
2026-08-22 01:22:03,004 [ scc.merge] INFO Repository: ome/omero-dropbox
2026-08-22 01:22:03,004 [ scc.merge] INFO Already up to date.
2026-08-22 01:22:03,004 [ scc.merge] INFO
2026-08-22 01:22:03,004 [ scc.merge] INFO
2026-08-22 01:22:03,004 [ scc.merge] INFO Repository: ome/omero-marshal
2026-08-22 01:22:03,004 [ scc.merge] INFO Excluded PRs:
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2026-08-22 01:22:03,004 [ scc.merge] INFO Updating a3dd99b..f8ff1c2
2026-08-22 01:22:03,004 [ scc.merge] INFO Previously merged:
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
2026-08-22 01:22:03,004 [ scc.merge] INFO
2026-08-22 01:22:03,004 [ scc.merge] INFO
2026-08-22 01:22:03,004 [ scc.merge] INFO Repository: ome/omero-py
2026-08-22 01:22:03,004 [ scc.merge] INFO Excluded PRs:
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric)
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
2026-08-22 01:22:03,004 [ scc.merge] INFO Updating b44120b5..5d0974d0
2026-08-22 01:22:03,004 [ scc.merge] INFO Previously merged:
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 498 sbesson 'Upgrade GitHub actions'
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 496 will-moore 'Fix ice-3.6 download link in README'
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 491 kkoz 'First pass at better cleanse dry-run output'
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 490 sbesson 'Remove support from Python 3.9'
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
2026-08-22 01:22:03,004 [ scc.merge] INFO
2026-08-22 01:22:03,004 [ scc.merge] INFO Merged PRs:
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
2026-08-22 01:22:03,004 [ scc.merge] INFO
2026-08-22 01:22:03,004 [ scc.merge] INFO Repository: ome/omero-scripts
2026-08-22 01:22:03,004 [ scc.merge] INFO Updating 03b9116..5b4d768
2026-08-22 01:22:03,004 [ scc.merge] INFO Previously merged:
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 231 jburel 'Create Release '
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label'
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix'
2026-08-22 01:22:03,004 [ scc.merge] INFO
2026-08-22 01:22:03,004 [ scc.merge] INFO Merged PRs:
2026-08-22 01:22:03,004 [ scc.merge] INFO - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
2026-08-22 01:22:03,004 [ scc.merge] INFO
2026-08-22 01:22:03,005 [ scc.merge] INFO Repository: ome/omero-web
2026-08-22 01:22:03,005 [ scc.merge] INFO Excluded PRs:
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
2026-08-22 01:22:03,005 [ scc.merge] INFO Updating 675d57fd7..116a77766
2026-08-22 01:22:03,005 [ scc.merge] INFO Previously merged:
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 683 will-moore 'Post data save imgRdef'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 679 knabar 'Allow POST requests from public user for specific URLs'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 655 will-moore 'Handle invalid group id in switch_active_group'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 664 knabar 'Pin django-pipeline to a recent version'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 658 will-moore 'Description scrollable if taller than 350px'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 646 knabar 'Force Django 5.2 in next release'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 639 Rdornier 'Split view user label'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 662 jburel 'Add gunicorn doc links'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 648 will-moore 'hide scrollbar for top-links'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 647 jburel 'Replace manual changelog by automated GH release step'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 645 knabar 'Update changelog for 5.30.0 release'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 637 knabar 'Upgrade to Django 5.2 '
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2026-08-22 01:22:03,005 [ scc.merge] INFO
2026-08-22 01:22:03,005 [ scc.merge] INFO Merged PRs:
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 643 will-moore 'Don't disable the histogram for big images'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 644 jo-mueller 'Add some install instructions for windows'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 677 will-moore 'Add table_histogram endpoint'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
2026-08-22 01:22:03,005 [ scc.merge] INFO - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
2026-08-22 01:22:03,005 [ scc.merge] INFO
2026-08-22 01:22:03,005 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-08-22 01:22:03,006 [ scc.git] DEBUG Calling 'git remote'
2026-08-22 01:22:03,017 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-08-22 01:22:03,017 [ scc.git] DEBUG Calling 'git remote'
2026-08-22 01:22:03,031 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-22 01:22:03,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-08-22 01:22:03,032 [ scc.git] DEBUG Calling 'git remote'
2026-08-22 01:22:03,045 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-22 01:22:03,045 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-08-22 01:22:03,045 [ scc.git] DEBUG Calling 'git remote'
2026-08-22 01:22:03,060 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-22 01:22:03,060 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-08-22 01:22:03,060 [ scc.git] DEBUG Calling 'git remote'
2026-08-22 01:22:03,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-22 01:22:03,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-08-22 01:22:03,074 [ scc.git] DEBUG Calling 'git remote'
2026-08-22 01:22:03,088 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
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Up-to-date:
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grep: build.gradle: No such file or directory
Up-to-date:
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Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from ac93ed4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from a3dd99b
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from b44120b5
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 03b9116
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 675d57fd7
nothing to commit, working tree clean
HEAD detached from b68c3cf
nothing to commit, working tree clean
2026-08-22 01:22:42,594 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
