![[Jenkins]](/jenkins/static/9bac06d9/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 587 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision e505e4936e5c9bb70e5ff78e9177f491ec55c92d (refs/remotes/origin/master) Commit message: "Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f e505e4936e5c9bb70e5ff78e9177f491ec55c92d # timeout=10 > git rev-list --no-walk 275cf49111cab67b32c61ae880152ce050cecf83 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 519 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.2 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.7.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.14-py3-none-any.whl.metadata (24 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.4-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.14.1-py3-none-any.whl.metadata (3.0 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-45.0.6-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.14 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting pycparser (from cffi>=1.14->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.8.3-py3-none-any.whl.metadata (2.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.7.0-py3-none-any.whl (416 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-45.0.6-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached requests-2.32.4-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.8.3-py3-none-any.whl (161 kB) Using cached typing_extensions-4.14.1-py3-none-any.whl (43 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Using cached ruamel.yaml-0.18.14-py3-none-any.whl (118 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.7.0 PyYAML-6.0.2 certifi-2025.8.3 cffi-1.17.1 charset_normalizer-3.4.3 cryptography-45.0.6 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.4 ruamel.yaml-0.18.14 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.14.1 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-08-15 00:34:55,138 [ scc.config] DEBUG Found github.token 2025-08-15 00:34:55,140 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:34:55,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:34:55,586 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:34:55,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:34:56,014 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:34:56,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-08-15 00:34:56,194 [ scc.gh] DEBUG 4353 remaining from 5000 (Reset at 01:08 2025-08-15 00:34:56,194 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-15 00:34:56,197 [ scc.git] DEBUG Check current status 2025-08-15 00:34:56,197 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-15 00:34:56,199 [ scc.git] DEBUG e505e49 Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235 2025-08-15 00:34:56,200 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-15 00:34:56,243 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-08-15 00:34:56,248 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-08-15 00:34:56,253 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-08-15 00:34:56,257 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34) 2025-08-15 00:34:56,262 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-08-15 00:34:56,265 [ scc.config] DEBUG Found remote.origin.url 2025-08-15 00:34:56,445 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:34:56,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-08-15 00:34:56,973 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:34:57,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-15 00:34:57,462 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:34:57,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-15 00:34:57,908 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:34:58,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-15 00:34:58,352 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:34:58,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-15 00:34:58,545 [ scc.git] DEBUG Resetting... 2025-08-15 00:34:58,545 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-08-15 00:34:58,550 [ scc.git] DEBUG HEAD is now at e505e49 Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235 2025-08-15 00:34:58,550 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-08-15 00:34:58,608 [ scc.git] DEBUG Check current status 2025-08-15 00:34:58,608 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-15 00:34:58,610 [ scc.git] DEBUG e505e49 Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235 2025-08-15 00:34:58,610 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-15 00:34:58,652 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-08-15 00:34:58,655 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-08-15 00:34:58,660 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-08-15 00:34:58,665 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34) 2025-08-15 00:34:58,670 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-08-15 00:34:58,670 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-08-15 00:34:58,670 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-08-15 00:34:58,670 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-08-15 00:34:58,670 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-08-15 00:34:58,671 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-08-15 00:34:58,671 [ scc.repo] DEBUG ## PRs found: 2025-08-15 00:34:58,796 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:34:59,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-08-15 00:34:59,008 [ scc.repo] DEBUG ## Branches found: 2025-08-15 00:34:59,008 [ scc.git] DEBUG Get sha1 of %s 2025-08-15 00:34:59,008 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:34:59,011 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-15 00:34:59,013 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-15 00:34:59,013 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-15 00:34:59,016 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-15 00:34:59,019 [ scc.git] DEBUG Already up to date. 2025-08-15 00:34:59,019 [ scc.git] DEBUG ## Unique users: [] 2025-08-15 00:34:59,019 [ scc.git] DEBUG Get sha1 of %s 2025-08-15 00:34:59,019 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:34:59,022 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-15 00:34:59,064 [ scc.git] DEBUG Get sha1 of %s 2025-08-15 00:34:59,064 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:34:59,066 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-15 00:34:59,102 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3eb1bfeb50> has no local changes 2025-08-15 00:34:59,102 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#491 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/491/)' 2025-08-15 00:34:59,128 [ scc.git] DEBUG [detached HEAD 92a8c59] merge master -Dorg -Snone 2025-08-15 00:34:59,129 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-08-15 00:34:59,129 [ scc.merge] INFO Already up to date. 2025-08-15 00:34:59,129 [ scc.merge] INFO 2025-08-15 00:34:59,129 [ scc.merge] INFO 2025-08-15 00:34:59,129 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-08-15 00:34:59,129 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-08-15 00:35:01,106 [ scc.config] DEBUG Found github.token 2025-08-15 00:35:01,107 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:01,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:35:01,552 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:01,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:35:01,982 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:02,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-08-15 00:35:02,151 [ scc.gh] DEBUG 4345 remaining from 5000 (Reset at 01:08 2025-08-15 00:35:02,151 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-15 00:35:02,154 [ scc.git] DEBUG Check current status 2025-08-15 00:35:02,154 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-15 00:35:02,156 [ scc.git] DEBUG 92a8c59 merge master -Dorg -Snone 2025-08-15 00:35:02,157 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-15 00:35:02,201 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-08-15 00:35:02,204 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-08-15 00:35:02,209 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-08-15 00:35:02,214 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34) 2025-08-15 00:35:02,218 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-08-15 00:35:02,221 [ scc.config] DEBUG Found remote.origin.url 2025-08-15 00:35:02,221 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-08-15 00:35:02,222 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-08-15 00:35:02,402 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:02,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-08-15 00:35:02,963 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:03,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-15 00:35:03,492 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:03,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-15 00:35:03,930 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:04,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-15 00:35:04,371 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:04,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-15 00:35:04,573 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-15 00:35:04,622 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-08-15 00:35:04,622 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-15 00:35:04,624 [ scc.git] DEBUG Check current status 2025-08-15 00:35:04,624 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-15 00:35:04,627 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-08-15 00:35:04,627 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-15 00:35:04,670 [ scc.config] DEBUG Found remote.origin.url 2025-08-15 00:35:04,823 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:05,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-08-15 00:35:05,390 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:05,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-15 00:35:05,878 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:06,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-15 00:35:06,325 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:06,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-15 00:35:06,822 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:07,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-15 00:35:07,037 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-15 00:35:07,079 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-15 00:35:07,080 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-08-15 00:35:07,080 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-15 00:35:07,082 [ scc.git] DEBUG Check current status 2025-08-15 00:35:07,082 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-15 00:35:07,085 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build 2025-08-15 00:35:07,085 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-15 00:35:07,128 [ scc.config] DEBUG Found remote.origin.url 2025-08-15 00:35:07,288 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:07,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-08-15 00:35:07,846 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:08,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-15 00:35:08,359 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:08,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-15 00:35:08,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:09,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-15 00:35:09,292 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:09,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-15 00:35:09,488 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-15 00:35:09,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-15 00:35:09,530 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-08-15 00:35:09,530 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-15 00:35:09,533 [ scc.git] DEBUG Check current status 2025-08-15 00:35:09,533 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-15 00:35:09,535 [ scc.git] DEBUG 70b6235a Merge pull request #464 from dominikl/map_anno_wrapper 2025-08-15 00:35:09,536 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-15 00:35:09,578 [ scc.config] DEBUG Found remote.origin.url 2025-08-15 00:35:09,738 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:10,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-08-15 00:35:10,268 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:10,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-15 00:35:10,769 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:10,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-15 00:35:11,210 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:11,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-15 00:35:11,714 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:11,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-15 00:35:11,896 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-15 00:35:11,938 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-15 00:35:11,939 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-08-15 00:35:11,939 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-15 00:35:11,941 [ scc.git] DEBUG Check current status 2025-08-15 00:35:11,941 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-15 00:35:11,944 [ scc.git] DEBUG 573db34 Bump version: 5.9.1 → 5.9.2.dev0 2025-08-15 00:35:11,944 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-15 00:35:11,986 [ scc.config] DEBUG Found remote.origin.url 2025-08-15 00:35:11,986 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-08-15 00:35:12,147 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:12,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-08-15 00:35:12,688 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:12,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-15 00:35:13,224 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:13,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-15 00:35:13,683 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:13,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-15 00:35:14,136 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:14,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-15 00:35:14,369 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-15 00:35:14,412 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-15 00:35:14,412 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-08-15 00:35:14,412 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-15 00:35:14,415 [ scc.git] DEBUG Check current status 2025-08-15 00:35:14,415 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-15 00:35:14,418 [ scc.git] DEBUG 2a7c4d2e3 Bump version: 5.29.2 → 5.29.3.dev0 2025-08-15 00:35:14,418 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-15 00:35:14,460 [ scc.config] DEBUG Found remote.origin.url 2025-08-15 00:35:14,620 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:14,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-08-15 00:35:15,153 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:15,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-15 00:35:15,719 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:15,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-15 00:35:16,193 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:16,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-15 00:35:16,640 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:16,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-15 00:35:16,871 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-15 00:35:16,912 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-15 00:35:16,912 [ scc.git] DEBUG Resetting... 2025-08-15 00:35:16,913 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-08-15 00:35:16,917 [ scc.git] DEBUG HEAD is now at 92a8c59 merge master -Dorg -Snone 2025-08-15 00:35:16,917 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-08-15 00:35:16,972 [ scc.git] DEBUG Check current status 2025-08-15 00:35:16,972 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-15 00:35:16,975 [ scc.git] DEBUG 92a8c59 merge master -Dorg -Snone 2025-08-15 00:35:16,975 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-15 00:35:17,019 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-08-15 00:35:17,022 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-08-15 00:35:17,027 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-08-15 00:35:17,032 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34) 2025-08-15 00:35:17,036 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-08-15 00:35:17,037 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-08-15 00:35:17,037 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-08-15 00:35:17,037 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-08-15 00:35:17,037 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-08-15 00:35:17,037 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-08-15 00:35:17,037 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-08-15 00:35:17,037 [ scc.repo] DEBUG ## PRs found: 2025-08-15 00:35:17,122 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:17,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-08-15 00:35:17,345 [ scc.repo] DEBUG ## Branches found: 2025-08-15 00:35:17,345 [ scc.git] DEBUG Get sha1 of %s 2025-08-15 00:35:17,345 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:35:17,347 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-15 00:35:17,349 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-15 00:35:17,349 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-15 00:35:17,352 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-15 00:35:17,356 [ scc.git] DEBUG Already up to date. 2025-08-15 00:35:17,356 [ scc.git] DEBUG ## Unique users: [] 2025-08-15 00:35:17,356 [ scc.git] DEBUG Get sha1 of %s 2025-08-15 00:35:17,356 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:35:17,358 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-15 00:35:17,401 [ scc.git] DEBUG Get sha1 of %s 2025-08-15 00:35:17,401 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:35:17,404 [ scc.repo] DEBUG ## PRs found: 2025-08-15 00:35:17,596 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:17,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-08-15 00:35:18,143 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:18,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-08-15 00:35:18,624 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:18,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-08-15 00:35:19,122 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:19,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-08-15 00:35:19,675 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:19,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-15 00:35:20,180 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:20,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-08-15 00:35:20,714 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:20,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-08-15 00:35:20,905 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-08-15 00:35:20,905 [ scc.repo] DEBUG ## Branches found: 2025-08-15 00:35:20,905 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-08-15 00:35:20,906 [ scc.git] DEBUG Get sha1 of %s 2025-08-15 00:35:20,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:35:20,908 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-15 00:35:20,911 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-15 00:35:20,911 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-15 00:35:20,914 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-15 00:35:20,917 [ scc.git] DEBUG Already up to date. 2025-08-15 00:35:20,917 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-08-15 00:35:21,208 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-08-15 00:35:21,208 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-08-15 00:35:21,213 [ scc.git] DEBUG ## Unique users: [] 2025-08-15 00:35:21,213 [ scc.git] DEBUG Get sha1 of %s 2025-08-15 00:35:21,213 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:35:21,216 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-08-15 00:35:21,219 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:35:21,221 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-08-15 00:35:21,235 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-08-15 00:35:21,235 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-08-15 00:35:21,235 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-08-15 00:35:21,235 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-08-15 00:35:21,235 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-08-15 00:35:21,235 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-08-15 00:35:21,235 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-08-15 00:35:21,235 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-08-15 00:35:21,235 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-08-15 00:35:21,236 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-15 00:35:21,240 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-08-15 00:35:21,240 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-08-15 00:35:21,240 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-08-15 00:35:21,240 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-08-15 00:35:21,241 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-08-15 00:35:21,241 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-08-15 00:35:21,241 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-08-15 00:35:21,241 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-08-15 00:35:21,241 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-08-15 00:35:21,241 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-08-15 00:35:21,242 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:21,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:35:21,448 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-15 00:35:21,489 [ scc.git] DEBUG Get sha1 of %s 2025-08-15 00:35:21,490 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:35:21,492 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-15 00:35:21,532 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-15 00:35:21,537 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f94771376d0> has no local changes 2025-08-15 00:35:21,537 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#491 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/491/)' 2025-08-15 00:35:21,544 [ scc.git] DEBUG [detached HEAD 0b27608] merge master -Dorg -Ssuccess-only 2025-08-15 00:35:21,544 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-15 00:35:21,544 [ scc.repo] DEBUG ## PRs found: 2025-08-15 00:35:21,700 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:22,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-08-15 00:35:22,350 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:22,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-08-15 00:35:22,892 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:23,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2025-08-15 00:35:23,393 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:23,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-08-15 00:35:23,897 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:24,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-08-15 00:35:24,455 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:24,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-08-15 00:35:25,139 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:25,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-15 00:35:25,626 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:25,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-08-15 00:35:26,171 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:26,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-08-15 00:35:26,375 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-08-15 00:35:26,626 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:26,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-08-15 00:35:27,138 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:27,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-08-15 00:35:27,619 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:27,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-08-15 00:35:28,135 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:28,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-08-15 00:35:28,412 [ scc.repo] DEBUG ## Branches found: 2025-08-15 00:35:28,412 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-08-15 00:35:28,412 [ scc.git] DEBUG Get sha1 of %s 2025-08-15 00:35:28,412 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:35:28,415 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-15 00:35:28,418 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-15 00:35:28,418 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-15 00:35:28,421 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-15 00:35:28,425 [ scc.git] DEBUG Already up to date. 2025-08-15 00:35:28,425 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-08-15 00:35:28,711 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-08-15 00:35:28,711 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-08-15 00:35:28,716 [ scc.git] DEBUG ## Unique users: [] 2025-08-15 00:35:28,716 [ scc.git] DEBUG Get sha1 of %s 2025-08-15 00:35:28,716 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:35:28,719 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-08-15 00:35:28,723 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:35:28,725 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-08-15 00:35:28,735 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-08-15 00:35:28,736 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-15 00:35:28,739 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-08-15 00:35:28,739 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-08-15 00:35:28,739 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-08-15 00:35:28,740 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:28,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:35:28,925 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-15 00:35:28,966 [ scc.git] DEBUG Get sha1 of %s 2025-08-15 00:35:28,967 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:35:28,969 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-15 00:35:29,009 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-15 00:35:29,014 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f947747c250> has no local changes 2025-08-15 00:35:29,014 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#491 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/491/)' 2025-08-15 00:35:29,020 [ scc.git] DEBUG [detached HEAD 79e3827] merge master -Dorg -Ssuccess-only 2025-08-15 00:35:29,021 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-15 00:35:29,021 [ scc.repo] DEBUG ## PRs found: 2025-08-15 00:35:29,176 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:29,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-08-15 00:35:29,892 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:30,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/472 HTTP/1.1" 200 None 2025-08-15 00:35:30,412 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:30,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/472/comments HTTP/1.1" 200 None 2025-08-15 00:35:30,950 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:31,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64 HTTP/1.1" 200 None 2025-08-15 00:35:31,493 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:31,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-15 00:35:31,996 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:32,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-15 00:35:32,514 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:32,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64 HTTP/1.1" 200 None 2025-08-15 00:35:33,113 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:33,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/fbcef67768f4e37313bc42a18b5fb078964fcf64?per_page=1 HTTP/1.1" 200 None 2025-08-15 00:35:33,584 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:33,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64 HTTP/1.1" 200 None 2025-08-15 00:35:34,061 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:34,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64/status HTTP/1.1" 200 None 2025-08-15 00:35:34,271 [ scc.repo] DEBUG - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3' 2025-08-15 00:35:34,522 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:34,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None 2025-08-15 00:35:35,060 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:35,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None 2025-08-15 00:35:35,577 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:35,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None 2025-08-15 00:35:36,096 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:36,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None 2025-08-15 00:35:36,592 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:36,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450/comments HTTP/1.1" 200 None 2025-08-15 00:35:37,065 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:37,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None 2025-08-15 00:35:37,570 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:37,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None 2025-08-15 00:35:37,867 [ scc.repo] DEBUG # ... Exclude label: exclude 2025-08-15 00:35:38,117 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:38,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-08-15 00:35:38,626 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:38,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-08-15 00:35:39,134 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:39,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-08-15 00:35:39,661 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:39,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-15 00:35:40,151 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:40,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-08-15 00:35:40,693 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:40,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 2 2025-08-15 00:35:40,887 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-08-15 00:35:41,138 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:41,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-08-15 00:35:41,648 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:41,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-08-15 00:35:42,139 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:42,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-08-15 00:35:42,685 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:42,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-15 00:35:43,204 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:43,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-15 00:35:43,702 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:43,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-08-15 00:35:44,206 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:44,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2025-08-15 00:35:44,679 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:44,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-08-15 00:35:45,189 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:45,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-15 00:35:45,687 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:46,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-08-15 00:35:46,281 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:46,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2025-08-15 00:35:46,493 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-08-15 00:35:46,744 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:47,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-08-15 00:35:47,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:47,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-08-15 00:35:47,750 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:48,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-08-15 00:35:48,286 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:48,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-15 00:35:48,754 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:49,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-08-15 00:35:49,308 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:49,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2 2025-08-15 00:35:49,507 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-08-15 00:35:49,758 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:50,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-08-15 00:35:50,257 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:50,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-08-15 00:35:50,728 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:50,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-08-15 00:35:51,239 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:51,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-08-15 00:35:51,757 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:52,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-08-15 00:35:52,307 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:52,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-15 00:35:52,793 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:53,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-08-15 00:35:53,270 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:53,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-08-15 00:35:53,461 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-08-15 00:35:53,462 [ scc.repo] DEBUG ## Branches found: 2025-08-15 00:35:53,462 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-08-15 00:35:53,462 [ scc.git] DEBUG Get sha1 of %s 2025-08-15 00:35:53,462 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:35:53,465 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-15 00:35:53,468 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-15 00:35:53,468 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-15 00:35:53,471 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-15 00:35:53,474 [ scc.git] DEBUG Already up to date. 2025-08-15 00:35:53,474 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-08-15 00:35:53,780 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-15 00:35:53,780 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-08-15 00:35:53,785 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-08-15 00:35:54,064 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-15 00:35:54,064 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-08-15 00:35:54,069 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-08-15 00:35:54,354 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-15 00:35:54,354 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-08-15 00:35:54,359 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-08-15 00:35:54,648 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-15 00:35:54,648 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-08-15 00:35:54,653 [ scc.git] DEBUG Calling 'git fetch origin pull/472/head' 2025-08-15 00:35:55,079 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-15 00:35:55,079 [ scc.git] DEBUG * branch refs/pull/472/head -> FETCH_HEAD 2025-08-15 00:35:55,082 [ scc.git] DEBUG ## Unique users: [] 2025-08-15 00:35:55,082 [ scc.git] DEBUG Get sha1 of %s 2025-08-15 00:35:55,082 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:35:55,085 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-08-15 00:35:55,098 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:35:55,100 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-08-15 00:35:55,122 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-08-15 00:35:55,122 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-08-15 00:35:55,124 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-15 00:35:55,128 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-08-15 00:35:55,128 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-08-15 00:35:55,128 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-08-15 00:35:55,129 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:55,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:35:55,320 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-08-15 00:35:55,333 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:35:55,335 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-08-15 00:35:55,357 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-15 00:35:55,360 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-08-15 00:35:55,360 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-08-15 00:35:55,360 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-08-15 00:35:55,360 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-08-15 00:35:55,360 [ scc.git] DEBUG create mode 100644 connect.py 2025-08-15 00:35:55,571 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:55,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:35:55,779 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-08-15 00:35:55,793 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:35:55,795 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-08-15 00:35:55,819 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-08-15 00:35:55,820 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-15 00:35:55,824 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-08-15 00:35:55,824 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-08-15 00:35:56,031 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:56,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:35:56,213 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-08-15 00:35:56,227 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:35:56,230 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-08-15 00:35:56,263 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-08-15 00:35:56,264 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-15 00:35:56,271 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-08-15 00:35:56,271 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-08-15 00:35:56,464 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:56,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:35:56,654 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fbcef67768f4e37313bc42a18b5fb078964fcf64' 2025-08-15 00:35:56,668 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:35:56,671 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 472 (Remove PyOpenSSL injection via urllib3) fbcef67768f4e37313bc42a18b5fb078964fcf64' 2025-08-15 00:35:56,695 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-15 00:35:56,698 [ scc.git] DEBUG setup.py | 1 - 2025-08-15 00:35:56,698 [ scc.git] DEBUG src/omero/util/upgrade_check.py | 7 ------- 2025-08-15 00:35:56,698 [ scc.git] DEBUG 2 files changed, 8 deletions(-) 2025-08-15 00:35:56,905 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:57,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:35:57,101 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-15 00:35:57,142 [ scc.git] DEBUG Get sha1 of %s 2025-08-15 00:35:57,142 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:35:57,145 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-15 00:35:57,184 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-15 00:35:57,191 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f94771adb50> has no local changes 2025-08-15 00:35:57,191 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3' Generated by OMERO-python-superbuild-push#491 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/491/)' 2025-08-15 00:35:57,198 [ scc.git] DEBUG [detached HEAD 80c4c512] merge master -Dorg -Ssuccess-only 2025-08-15 00:35:57,199 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-15 00:35:57,199 [ scc.git] INFO Overriding base-branch from master to develop 2025-08-15 00:35:57,199 [ scc.repo] DEBUG ## PRs found: 2025-08-15 00:35:57,352 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:57,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-08-15 00:35:57,966 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:58,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-08-15 00:35:58,474 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:58,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-08-15 00:35:58,974 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:59,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-08-15 00:35:59,522 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:35:59,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-15 00:36:00,035 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:00,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-15 00:36:00,607 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:00,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-08-15 00:36:01,190 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:01,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-08-15 00:36:01,392 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-08-15 00:36:01,643 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:01,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-08-15 00:36:02,145 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:02,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-08-15 00:36:02,613 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:02,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-08-15 00:36:03,167 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:03,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-15 00:36:03,673 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:03,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-08-15 00:36:04,213 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:04,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-08-15 00:36:04,413 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-08-15 00:36:04,664 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:04,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-08-15 00:36:05,192 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:05,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-08-15 00:36:05,693 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:05,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-08-15 00:36:06,215 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:06,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-08-15 00:36:06,454 [ scc.repo] DEBUG ## Branches found: 2025-08-15 00:36:06,454 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-08-15 00:36:06,454 [ scc.git] DEBUG Get sha1 of %s 2025-08-15 00:36:06,454 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:36:06,457 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-08-15 00:36:06,459 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-15 00:36:06,459 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-08-15 00:36:06,462 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-08-15 00:36:06,466 [ scc.git] DEBUG Already up to date. 2025-08-15 00:36:06,466 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-08-15 00:36:06,755 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-08-15 00:36:06,755 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-08-15 00:36:06,760 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-08-15 00:36:07,038 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-08-15 00:36:07,038 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-08-15 00:36:07,042 [ scc.git] DEBUG ## Unique users: [] 2025-08-15 00:36:07,042 [ scc.git] DEBUG Get sha1 of %s 2025-08-15 00:36:07,042 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:36:07,045 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-15 00:36:07,050 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:36:07,053 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-15 00:36:07,063 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-08-15 00:36:07,064 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-15 00:36:07,064 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-15 00:36:07,067 [ scc.git] DEBUG Calling 'git reset --hard 573db340d5d1429fa17c7e486206948412a7c150' 2025-08-15 00:36:07,071 [ scc.git] DEBUG HEAD is now at 573db34 Bump version: 5.9.1 → 5.9.2.dev0 2025-08-15 00:36:07,072 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:07,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:36:07,265 [ scc.git] DEBUG Calling 'git merge-base 573db340d5d1429fa17c7e486206948412a7c150 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-15 00:36:07,270 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..573db340d5d1429fa17c7e486206948412a7c150' 2025-08-15 00:36:07,275 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#491](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/491/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/491/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-08-15 00:36:07,277 [ scc.config] DEBUG Found github.token 2025-08-15 00:36:07,277 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-08-15 00:36:07,277 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-08-15 00:36:07,282 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:36:07,284 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-08-15 00:36:07,295 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-15 00:36:07,299 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-08-15 00:36:07,299 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-08-15 00:36:07,516 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:07,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:36:07,727 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-15 00:36:07,768 [ scc.git] DEBUG Get sha1 of %s 2025-08-15 00:36:07,768 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:36:07,771 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-15 00:36:07,811 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-15 00:36:07,815 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9477124090> has no local changes 2025-08-15 00:36:07,815 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#491 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/491/)' 2025-08-15 00:36:07,822 [ scc.git] DEBUG [detached HEAD bdc05ef] merge master -Dorg -Ssuccess-only 2025-08-15 00:36:07,823 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-15 00:36:07,823 [ scc.repo] DEBUG ## PRs found: 2025-08-15 00:36:07,978 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:08,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-08-15 00:36:08,673 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:08,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/629 HTTP/1.1" 200 None 2025-08-15 00:36:09,243 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:09,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/628 HTTP/1.1" 200 None 2025-08-15 00:36:09,749 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:10,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-08-15 00:36:10,308 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:10,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-15 00:36:10,832 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:11,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-15 00:36:11,369 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:11,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-08-15 00:36:11,855 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:12,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b8c7989c9900270d7cf27523f2649bbb903c7a60?per_page=1 HTTP/1.1" 200 None 2025-08-15 00:36:12,335 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:12,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-08-15 00:36:12,902 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:13,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/status HTTP/1.1" 200 None 2025-08-15 00:36:13,106 [ scc.repo] DEBUG - PR 628 jburel 'Add protocol required since Django4' 2025-08-15 00:36:13,357 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:13,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/619 HTTP/1.1" 200 None 2025-08-15 00:36:13,878 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:14,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-08-15 00:36:14,447 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:14,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-15 00:36:15,046 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:15,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-15 00:36:15,600 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:15,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-08-15 00:36:16,178 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:16,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6dbfcebfee72e20f36a434fdc8850930d89acdac?per_page=1 HTTP/1.1" 200 None 2025-08-15 00:36:16,633 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:16,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-08-15 00:36:17,102 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:17,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/status HTTP/1.1" 200 None 2025-08-15 00:36:17,318 [ scc.repo] DEBUG - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-08-15 00:36:17,569 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:17,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None 2025-08-15 00:36:18,091 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:18,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None 2025-08-15 00:36:18,591 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:18,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None 2025-08-15 00:36:19,117 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:19,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-15 00:36:19,620 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:19,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-15 00:36:20,112 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:20,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None 2025-08-15 00:36:20,581 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:20,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/cca34cb278cac5fb8088df75cc4fe5f315810342?per_page=1 HTTP/1.1" 200 None 2025-08-15 00:36:21,037 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:21,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None 2025-08-15 00:36:21,557 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:21,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/status HTTP/1.1" 200 None 2025-08-15 00:36:21,810 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display' 2025-08-15 00:36:22,061 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:22,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None 2025-08-15 00:36:22,585 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:22,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None 2025-08-15 00:36:23,112 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:23,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-08-15 00:36:23,670 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:23,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-15 00:36:24,203 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:24,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-15 00:36:24,711 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:25,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-08-15 00:36:25,288 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:25,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None 2025-08-15 00:36:25,747 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:25,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-08-15 00:36:26,207 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:26,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None 2025-08-15 00:36:26,414 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-08-15 00:36:26,665 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:26,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-08-15 00:36:27,173 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:27,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2025-08-15 00:36:27,702 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:27,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-08-15 00:36:28,251 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:28,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-15 00:36:28,795 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:29,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-15 00:36:29,317 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:29,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-08-15 00:36:29,895 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:30,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-08-15 00:36:30,351 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:30,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-08-15 00:36:30,891 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:31,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-08-15 00:36:31,120 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-08-15 00:36:31,371 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:31,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-08-15 00:36:31,882 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:32,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-08-15 00:36:32,405 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:32,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-15 00:36:32,939 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:33,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-15 00:36:33,536 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:33,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-08-15 00:36:34,052 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:34,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-08-15 00:36:34,509 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:34,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-08-15 00:36:34,976 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:35,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-08-15 00:36:35,185 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2025-08-15 00:36:35,435 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:35,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-08-15 00:36:35,950 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:36,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-08-15 00:36:36,444 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:36,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-08-15 00:36:36,976 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:37,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-15 00:36:37,494 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:37,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-15 00:36:38,006 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:38,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-08-15 00:36:38,483 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:38,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-08-15 00:36:38,946 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:39,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-08-15 00:36:39,409 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:39,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-08-15 00:36:39,635 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-08-15 00:36:39,885 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:40,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-08-15 00:36:40,405 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:40,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-08-15 00:36:40,928 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:41,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-08-15 00:36:41,472 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:41,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-15 00:36:41,974 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:42,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-15 00:36:42,515 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:42,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-08-15 00:36:42,975 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:43,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-08-15 00:36:43,452 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:43,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-08-15 00:36:43,921 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:44,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-08-15 00:36:44,161 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-08-15 00:36:44,412 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:44,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-08-15 00:36:44,914 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:45,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-08-15 00:36:45,410 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:45,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-08-15 00:36:45,913 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:46,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-08-15 00:36:46,409 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:46,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-08-15 00:36:47,016 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:47,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-15 00:36:47,504 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:47,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-08-15 00:36:48,080 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:48,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2 2025-08-15 00:36:48,280 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-08-15 00:36:48,531 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:48,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-08-15 00:36:49,042 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:49,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-08-15 00:36:49,524 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:49,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-08-15 00:36:50,100 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:50,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-15 00:36:50,592 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:50,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-08-15 00:36:51,103 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:51,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2 2025-08-15 00:36:51,326 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-08-15 00:36:51,577 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:51,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-08-15 00:36:52,072 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:52,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-08-15 00:36:52,580 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:52,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-08-15 00:36:53,119 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:53,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-15 00:36:53,625 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:53,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-08-15 00:36:54,149 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:54,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06b0073db19eeccb9698860f75639084ad1b1200?per_page=1 HTTP/1.1" 200 2 2025-08-15 00:36:54,345 [ scc.repo] DEBUG - PR 168 stick 'Changes to nginx @maintenance handler' 2025-08-15 00:36:54,346 [ scc.repo] DEBUG ## Branches found: 2025-08-15 00:36:54,346 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-08-15 00:36:54,346 [ scc.git] DEBUG Get sha1 of %s 2025-08-15 00:36:54,346 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:36:54,349 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-15 00:36:54,352 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-15 00:36:54,352 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-15 00:36:54,355 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-15 00:36:54,359 [ scc.git] DEBUG Already up to date. 2025-08-15 00:36:54,359 [ scc.git] DEBUG Calling 'git fetch origin pull/168/head' 2025-08-15 00:36:54,692 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-15 00:36:54,692 [ scc.git] DEBUG * branch refs/pull/168/head -> FETCH_HEAD 2025-08-15 00:36:54,696 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-08-15 00:36:54,985 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-15 00:36:54,985 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-08-15 00:36:54,990 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-08-15 00:36:55,287 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-15 00:36:55,287 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-08-15 00:36:55,292 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-08-15 00:36:55,573 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-15 00:36:55,573 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-08-15 00:36:55,578 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-08-15 00:36:55,864 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-15 00:36:55,864 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-08-15 00:36:55,869 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-08-15 00:36:56,161 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-15 00:36:56,161 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-08-15 00:36:56,166 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-08-15 00:36:56,451 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-15 00:36:56,452 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-08-15 00:36:56,456 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-08-15 00:36:56,745 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-15 00:36:56,745 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-08-15 00:36:56,750 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head' 2025-08-15 00:36:57,038 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-15 00:36:57,038 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD 2025-08-15 00:36:57,043 [ scc.git] DEBUG Calling 'git fetch origin pull/619/head' 2025-08-15 00:36:57,337 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-15 00:36:57,337 [ scc.git] DEBUG * branch refs/pull/619/head -> FETCH_HEAD 2025-08-15 00:36:57,342 [ scc.git] DEBUG Calling 'git fetch origin pull/628/head' 2025-08-15 00:36:57,632 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-15 00:36:57,632 [ scc.git] DEBUG * branch refs/pull/628/head -> FETCH_HEAD 2025-08-15 00:36:57,636 [ scc.git] DEBUG ## Unique users: [] 2025-08-15 00:36:57,636 [ scc.git] DEBUG Get sha1 of %s 2025-08-15 00:36:57,636 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:36:57,639 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06b0073db19eeccb9698860f75639084ad1b1200' 2025-08-15 00:36:57,648 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:36:57,650 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 168 (Changes to nginx @maintenance handler) 06b0073db19eeccb9698860f75639084ad1b1200' 2025-08-15 00:36:57,671 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-15 00:36:57,675 [ scc.git] DEBUG omeroweb/templates/nginx-development.conf.template | 2 +- 2025-08-15 00:36:57,675 [ scc.git] DEBUG omeroweb/templates/nginx-location.conf.template | 3 ++- 2025-08-15 00:36:57,675 [ scc.git] DEBUG omeroweb/templates/nginx.conf.template | 2 +- 2025-08-15 00:36:57,675 [ scc.git] DEBUG test/unit/reference_templates/nginx-development-withoptions.conf | 2 +- 2025-08-15 00:36:57,675 [ scc.git] DEBUG test/unit/reference_templates/nginx-development.conf | 2 +- 2025-08-15 00:36:57,676 [ scc.git] DEBUG test/unit/reference_templates/nginx-location-withoptions.conf | 3 ++- 2025-08-15 00:36:57,676 [ scc.git] DEBUG test/unit/reference_templates/nginx-location.conf | 3 ++- 2025-08-15 00:36:57,676 [ scc.git] DEBUG test/unit/reference_templates/nginx-withoptions.conf | 2 +- 2025-08-15 00:36:57,676 [ scc.git] DEBUG test/unit/reference_templates/nginx.conf | 2 +- 2025-08-15 00:36:57,676 [ scc.git] DEBUG test/unit/test_web.py | 1 + 2025-08-15 00:36:57,676 [ scc.git] DEBUG 10 files changed, 13 insertions(+), 9 deletions(-) 2025-08-15 00:36:57,677 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:57,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:36:57,875 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-08-15 00:36:57,885 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:36:57,887 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-08-15 00:36:57,908 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-08-15 00:36:57,908 [ scc.git] DEBUG Auto-merging setup.py 2025-08-15 00:36:57,910 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-15 00:36:57,915 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-08-15 00:36:57,915 [ scc.git] DEBUG setup.py | 1 + 2025-08-15 00:36:57,915 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-08-15 00:36:58,126 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:58,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:36:58,312 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-08-15 00:36:58,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:36:58,323 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-08-15 00:36:58,347 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-08-15 00:36:58,347 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-08-15 00:36:58,348 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-15 00:36:58,353 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-08-15 00:36:58,353 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-08-15 00:36:58,353 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-08-15 00:36:58,563 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:58,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:36:58,744 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-08-15 00:36:58,753 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:36:58,756 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-08-15 00:36:58,777 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-15 00:36:58,781 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-08-15 00:36:58,781 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-15 00:36:58,995 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:59,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:36:59,177 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-08-15 00:36:59,186 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:36:59,189 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-08-15 00:36:59,210 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-15 00:36:59,214 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-08-15 00:36:59,214 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-08-15 00:36:59,428 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:36:59,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:36:59,602 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-08-15 00:36:59,611 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:36:59,613 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-08-15 00:36:59,636 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-15 00:36:59,642 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-08-15 00:36:59,642 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-08-15 00:36:59,642 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-08-15 00:36:59,642 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-08-15 00:36:59,642 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-08-15 00:36:59,642 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-08-15 00:36:59,642 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-08-15 00:36:59,642 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-08-15 00:36:59,642 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-08-15 00:36:59,643 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-08-15 00:36:59,643 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-08-15 00:36:59,643 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-08-15 00:36:59,852 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:37:00,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:37:00,050 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-08-15 00:37:00,059 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:37:00,062 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-08-15 00:37:00,089 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-08-15 00:37:00,091 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-15 00:37:00,097 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-08-15 00:37:00,097 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-08-15 00:37:00,097 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-08-15 00:37:00,097 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-08-15 00:37:00,301 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:37:00,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:37:00,548 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-08-15 00:37:00,558 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:37:00,560 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-08-15 00:37:00,584 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-15 00:37:00,588 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++ 2025-08-15 00:37:00,588 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++---------- 2025-08-15 00:37:00,588 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-) 2025-08-15 00:37:00,799 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:37:00,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:37:00,978 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cca34cb278cac5fb8088df75cc4fe5f315810342' 2025-08-15 00:37:00,989 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:37:00,992 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) cca34cb278cac5fb8088df75cc4fe5f315810342' 2025-08-15 00:37:01,017 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-15 00:37:01,022 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 20 ++++++++++++-- 2025-08-15 00:37:01,022 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 31 +++++++++++++++------- 2025-08-15 00:37:01,022 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 2 ++ 2025-08-15 00:37:01,022 [ scc.git] DEBUG 3 files changed, 42 insertions(+), 11 deletions(-) 2025-08-15 00:37:01,229 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:37:01,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:37:01,414 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-08-15 00:37:01,423 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:37:01,426 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 619 (Permit subpackages as app plugins) 6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-08-15 00:37:01,448 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-08-15 00:37:01,450 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-15 00:37:01,454 [ scc.git] DEBUG omeroweb/settings.py | 9 ++++----- 2025-08-15 00:37:01,454 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 5 deletions(-) 2025-08-15 00:37:01,664 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:37:01,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:37:01,859 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8c7989c9900270d7cf27523f2649bbb903c7a60' 2025-08-15 00:37:01,870 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:37:01,872 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 628 (Add protocol required since Django4) b8c7989c9900270d7cf27523f2649bbb903c7a60' 2025-08-15 00:37:01,894 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-08-15 00:37:01,896 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-15 00:37:01,899 [ scc.git] DEBUG omeroweb/settings.py | 4 ++-- 2025-08-15 00:37:01,899 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2025-08-15 00:37:02,110 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:37:02,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:37:02,298 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-15 00:37:02,342 [ scc.git] DEBUG Get sha1 of %s 2025-08-15 00:37:02,342 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-15 00:37:02,344 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-15 00:37:02,385 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-15 00:37:02,394 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f94779819d0> has no local changes 2025-08-15 00:37:02,394 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) Already up to date. Merged PRs: - PR 168 stick 'Changes to nginx @maintenance handler' - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 628 jburel 'Add protocol required since Django4' Generated by OMERO-python-superbuild-push#491 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/491/)' 2025-08-15 00:37:02,404 [ scc.git] DEBUG [detached HEAD eff81e5d4] merge master -Dorg -Ssuccess-only 2025-08-15 00:37:02,404 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-15 00:37:02,405 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-15 00:37:02,455 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-08-15 00:37:02,549 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:37:02,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:37:02,791 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-08-15 00:37:03,035 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:37:03,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:37:03,229 [ scc.config] DEBUG Found submodule.omero-py.url 2025-08-15 00:37:03,474 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:37:03,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:37:03,688 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-08-15 00:37:03,932 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:37:04,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:37:04,125 [ scc.config] DEBUG Found submodule.omero-web.url 2025-08-15 00:37:04,369 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-15 00:37:04,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-15 00:37:04,559 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-15 00:37:04,588 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9477190a50> has local changes 2025-08-15 00:37:04,588 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) Already up to date. Merged PRs: - PR 168 stick 'Changes to nginx @maintenance handler' - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 628 jburel 'Add protocol required since Django4' Generated by OMERO-python-superbuild-push#491 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/491/)' 2025-08-15 00:37:04,596 [ scc.git] DEBUG [detached HEAD 48b920c] merge master -Dorg -Ssuccess-only 2025-08-15 00:37:04,596 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-08-15 00:37:04,597 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-08-15 00:37:04,597 [ scc.merge] INFO Already up to date. 2025-08-15 00:37:04,597 [ scc.merge] INFO 2025-08-15 00:37:04,597 [ scc.merge] INFO 2025-08-15 00:37:04,597 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-08-15 00:37:04,597 [ scc.merge] INFO Already up to date. 2025-08-15 00:37:04,597 [ scc.merge] INFO 2025-08-15 00:37:04,597 [ scc.merge] INFO Merged PRs: 2025-08-15 00:37:04,597 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-08-15 00:37:04,597 [ scc.merge] INFO 2025-08-15 00:37:04,597 [ scc.merge] INFO Repository: ome/omero-marshal 2025-08-15 00:37:04,597 [ scc.merge] INFO Excluded PRs: 2025-08-15 00:37:04,597 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-08-15 00:37:04,597 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-08-15 00:37:04,597 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-08-15 00:37:04,597 [ scc.merge] INFO Already up to date. 2025-08-15 00:37:04,597 [ scc.merge] INFO 2025-08-15 00:37:04,597 [ scc.merge] INFO Merged PRs: 2025-08-15 00:37:04,597 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-08-15 00:37:04,597 [ scc.merge] INFO 2025-08-15 00:37:04,597 [ scc.merge] INFO Repository: ome/omero-py 2025-08-15 00:37:04,597 [ scc.merge] INFO Excluded PRs: 2025-08-15 00:37:04,597 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric) 2025-08-15 00:37:04,597 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) 2025-08-15 00:37:04,597 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric) 2025-08-15 00:37:04,597 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) 2025-08-15 00:37:04,597 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-08-15 00:37:04,597 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) 2025-08-15 00:37:04,597 [ scc.merge] INFO Already up to date. 2025-08-15 00:37:04,597 [ scc.merge] INFO 2025-08-15 00:37:04,598 [ scc.merge] INFO Merged PRs: 2025-08-15 00:37:04,598 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-08-15 00:37:04,598 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-08-15 00:37:04,598 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-08-15 00:37:04,598 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-08-15 00:37:04,598 [ scc.merge] INFO - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3' 2025-08-15 00:37:04,598 [ scc.merge] INFO 2025-08-15 00:37:04,598 [ scc.merge] INFO Repository: ome/omero-scripts 2025-08-15 00:37:04,598 [ scc.merge] INFO Excluded PRs: 2025-08-15 00:37:04,598 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-08-15 00:37:04,598 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-08-15 00:37:04,598 [ scc.merge] INFO Already up to date. 2025-08-15 00:37:04,598 [ scc.merge] INFO 2025-08-15 00:37:04,598 [ scc.merge] INFO Merged PRs: 2025-08-15 00:37:04,598 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-08-15 00:37:04,598 [ scc.merge] INFO 2025-08-15 00:37:04,598 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-15 00:37:04,598 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-08-15 00:37:04,598 [ scc.merge] INFO 2025-08-15 00:37:04,598 [ scc.merge] INFO Repository: ome/omero-web 2025-08-15 00:37:04,598 [ scc.merge] INFO Excluded PRs: 2025-08-15 00:37:04,598 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-08-15 00:37:04,598 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-08-15 00:37:04,598 [ scc.merge] INFO Already up to date. 2025-08-15 00:37:04,598 [ scc.merge] INFO 2025-08-15 00:37:04,598 [ scc.merge] INFO Merged PRs: 2025-08-15 00:37:04,598 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' 2025-08-15 00:37:04,598 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-08-15 00:37:04,598 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-08-15 00:37:04,598 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-08-15 00:37:04,598 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-08-15 00:37:04,598 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2025-08-15 00:37:04,598 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-08-15 00:37:04,598 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-08-15 00:37:04,598 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2025-08-15 00:37:04,598 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-08-15 00:37:04,598 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4' 2025-08-15 00:37:04,598 [ scc.merge] INFO 2025-08-15 00:37:04,599 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-08-15 00:37:04,599 [ scc.git] DEBUG Calling 'git remote' 2025-08-15 00:37:04,601 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-08-15 00:37:04,601 [ scc.git] DEBUG Calling 'git remote' 2025-08-15 00:37:04,603 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-15 00:37:04,603 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-08-15 00:37:04,603 [ scc.git] DEBUG Calling 'git remote' 2025-08-15 00:37:04,606 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-15 00:37:04,606 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-08-15 00:37:04,606 [ scc.git] DEBUG Calling 'git remote' 2025-08-15 00:37:04,608 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-15 00:37:04,608 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-08-15 00:37:04,608 [ scc.git] DEBUG Calling 'git remote' 2025-08-15 00:37:04,611 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-15 00:37:04,611 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-08-15 00:37:04,611 [ scc.git] DEBUG Calling 'git remote' 2025-08-15 00:37:04,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 6d44f66 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 70b6235a nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 573db34 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 2a7c4d2e3 nothing to commit, working tree clean HEAD detached from e505e49 nothing to commit, working tree clean 2025-08-15 00:37:34,445 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS