![[Jenkins]](/jenkins/static/9bac06d9/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 591 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision e505e4936e5c9bb70e5ff78e9177f491ec55c92d (refs/remotes/origin/master) Commit message: "Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f e505e4936e5c9bb70e5ff78e9177f491ec55c92d # timeout=10 > git rev-list --no-walk e505e4936e5c9bb70e5ff78e9177f491ec55c92d # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 523 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.2 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.7.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.14-py3-none-any.whl.metadata (24 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.14.1-py3-none-any.whl.metadata (3.0 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-45.0.6-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.14 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting pycparser (from cffi>=1.14->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.8.3-py3-none-any.whl.metadata (2.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.7.0-py3-none-any.whl (416 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-45.0.6-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.8.3-py3-none-any.whl (161 kB) Using cached typing_extensions-4.14.1-py3-none-any.whl (43 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Using cached ruamel.yaml-0.18.14-py3-none-any.whl (118 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.7.0 PyYAML-6.0.2 certifi-2025.8.3 cffi-1.17.1 charset_normalizer-3.4.3 cryptography-45.0.6 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.5 ruamel.yaml-0.18.14 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.14.1 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-08-19 00:43:48,856 [ scc.config] DEBUG Found github.token 2025-08-19 00:43:48,857 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:43:49,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:43:49,344 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:43:49,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:43:49,799 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:43:49,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-08-19 00:43:49,984 [ scc.gh] DEBUG 4998 remaining from 5000 (Reset at 01:08 2025-08-19 00:43:49,985 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-19 00:43:49,987 [ scc.git] DEBUG Check current status 2025-08-19 00:43:49,987 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-19 00:43:49,990 [ scc.git] DEBUG e505e49 Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235 2025-08-19 00:43:49,990 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-19 00:43:50,037 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-08-19 00:43:50,040 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-08-19 00:43:50,045 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-08-19 00:43:50,050 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34) 2025-08-19 00:43:50,054 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-08-19 00:43:50,057 [ scc.config] DEBUG Found remote.origin.url 2025-08-19 00:43:50,236 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:43:50,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-08-19 00:43:50,814 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:43:51,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-19 00:43:51,340 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:43:51,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-19 00:43:51,827 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:43:52,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-19 00:43:52,343 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:43:52,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-19 00:43:52,561 [ scc.git] DEBUG Resetting... 2025-08-19 00:43:52,561 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-08-19 00:43:52,566 [ scc.git] DEBUG HEAD is now at e505e49 Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235 2025-08-19 00:43:52,566 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-08-19 00:43:52,627 [ scc.git] DEBUG Check current status 2025-08-19 00:43:52,627 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-19 00:43:52,629 [ scc.git] DEBUG e505e49 Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235 2025-08-19 00:43:52,629 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-19 00:43:52,672 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-08-19 00:43:52,676 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-08-19 00:43:52,681 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-08-19 00:43:52,685 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34) 2025-08-19 00:43:52,690 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-08-19 00:43:52,691 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-08-19 00:43:52,691 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-08-19 00:43:52,691 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-08-19 00:43:52,691 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-08-19 00:43:52,691 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-08-19 00:43:52,691 [ scc.repo] DEBUG ## PRs found: 2025-08-19 00:43:52,812 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:43:53,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-08-19 00:43:53,130 [ scc.repo] DEBUG ## Branches found: 2025-08-19 00:43:53,130 [ scc.git] DEBUG Get sha1 of %s 2025-08-19 00:43:53,130 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:43:53,133 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-19 00:43:53,135 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-19 00:43:53,135 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-19 00:43:53,138 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-19 00:43:53,141 [ scc.git] DEBUG Already up to date. 2025-08-19 00:43:53,141 [ scc.git] DEBUG ## Unique users: [] 2025-08-19 00:43:53,141 [ scc.git] DEBUG Get sha1 of %s 2025-08-19 00:43:53,141 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:43:53,144 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-19 00:43:53,186 [ scc.git] DEBUG Get sha1 of %s 2025-08-19 00:43:53,186 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:43:53,188 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-19 00:43:53,224 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbecb9679d0> has no local changes 2025-08-19 00:43:53,224 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#495 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/495/)' 2025-08-19 00:43:53,251 [ scc.git] DEBUG [detached HEAD 500d357] merge master -Dorg -Snone 2025-08-19 00:43:53,252 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-08-19 00:43:53,252 [ scc.merge] INFO Already up to date. 2025-08-19 00:43:53,252 [ scc.merge] INFO 2025-08-19 00:43:53,252 [ scc.merge] INFO 2025-08-19 00:43:53,252 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-08-19 00:43:53,252 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-08-19 00:43:55,187 [ scc.config] DEBUG Found github.token 2025-08-19 00:43:55,188 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:43:55,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:43:55,641 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:43:55,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:43:56,099 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:43:56,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-08-19 00:43:56,295 [ scc.gh] DEBUG 4990 remaining from 5000 (Reset at 01:08 2025-08-19 00:43:56,295 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-19 00:43:56,298 [ scc.git] DEBUG Check current status 2025-08-19 00:43:56,298 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-19 00:43:56,301 [ scc.git] DEBUG 500d357 merge master -Dorg -Snone 2025-08-19 00:43:56,301 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-19 00:43:56,345 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-08-19 00:43:56,349 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-08-19 00:43:56,354 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-08-19 00:43:56,358 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34) 2025-08-19 00:43:56,363 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-08-19 00:43:56,366 [ scc.config] DEBUG Found remote.origin.url 2025-08-19 00:43:56,366 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-08-19 00:43:56,367 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-08-19 00:43:56,547 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:43:56,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-08-19 00:43:57,130 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:43:57,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-19 00:43:57,654 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:43:57,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-19 00:43:58,138 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:43:58,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-19 00:43:58,616 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:43:58,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-19 00:43:58,847 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-19 00:43:58,897 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-08-19 00:43:58,897 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-19 00:43:58,899 [ scc.git] DEBUG Check current status 2025-08-19 00:43:58,899 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-19 00:43:58,902 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-08-19 00:43:58,902 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-19 00:43:58,945 [ scc.config] DEBUG Found remote.origin.url 2025-08-19 00:43:59,098 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:43:59,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-08-19 00:43:59,689 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:43:59,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-19 00:44:00,198 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:00,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-19 00:44:00,711 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:00,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-19 00:44:01,193 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:01,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-19 00:44:01,476 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-19 00:44:01,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-19 00:44:01,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-08-19 00:44:01,518 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-19 00:44:01,520 [ scc.git] DEBUG Check current status 2025-08-19 00:44:01,520 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-19 00:44:01,523 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build 2025-08-19 00:44:01,523 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-19 00:44:01,566 [ scc.config] DEBUG Found remote.origin.url 2025-08-19 00:44:01,728 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:02,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-08-19 00:44:02,311 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:02,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-19 00:44:02,858 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:03,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-19 00:44:03,328 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:03,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-19 00:44:03,831 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:04,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-19 00:44:04,047 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-19 00:44:04,090 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-19 00:44:04,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-08-19 00:44:04,091 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-19 00:44:04,094 [ scc.git] DEBUG Check current status 2025-08-19 00:44:04,094 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-19 00:44:04,096 [ scc.git] DEBUG 70b6235a Merge pull request #464 from dominikl/map_anno_wrapper 2025-08-19 00:44:04,097 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-19 00:44:04,140 [ scc.config] DEBUG Found remote.origin.url 2025-08-19 00:44:04,299 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:04,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-08-19 00:44:04,929 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:05,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-19 00:44:05,422 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:05,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-19 00:44:05,945 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:06,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-19 00:44:06,432 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:06,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-19 00:44:06,657 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-19 00:44:06,700 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-19 00:44:06,701 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-08-19 00:44:06,701 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-19 00:44:06,703 [ scc.git] DEBUG Check current status 2025-08-19 00:44:06,703 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-19 00:44:06,706 [ scc.git] DEBUG 573db34 Bump version: 5.9.1 → 5.9.2.dev0 2025-08-19 00:44:06,706 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-19 00:44:06,749 [ scc.config] DEBUG Found remote.origin.url 2025-08-19 00:44:06,749 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-08-19 00:44:06,909 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:07,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-08-19 00:44:07,499 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:07,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-19 00:44:08,042 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:08,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-19 00:44:08,508 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:08,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-19 00:44:08,969 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:09,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-19 00:44:09,164 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-19 00:44:09,206 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-19 00:44:09,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-08-19 00:44:09,207 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-19 00:44:09,209 [ scc.git] DEBUG Check current status 2025-08-19 00:44:09,209 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-19 00:44:09,212 [ scc.git] DEBUG 2a7c4d2e3 Bump version: 5.29.2 → 5.29.3.dev0 2025-08-19 00:44:09,212 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-19 00:44:09,257 [ scc.config] DEBUG Found remote.origin.url 2025-08-19 00:44:09,416 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:09,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-08-19 00:44:09,970 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:10,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-19 00:44:10,475 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:10,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-19 00:44:10,938 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:11,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-19 00:44:11,414 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:11,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-19 00:44:11,641 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-19 00:44:11,683 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-19 00:44:11,683 [ scc.git] DEBUG Resetting... 2025-08-19 00:44:11,683 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-08-19 00:44:11,688 [ scc.git] DEBUG HEAD is now at 500d357 merge master -Dorg -Snone 2025-08-19 00:44:11,688 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-08-19 00:44:11,745 [ scc.git] DEBUG Check current status 2025-08-19 00:44:11,745 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-19 00:44:11,747 [ scc.git] DEBUG 500d357 merge master -Dorg -Snone 2025-08-19 00:44:11,747 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-19 00:44:11,789 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-08-19 00:44:11,793 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-08-19 00:44:11,798 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-08-19 00:44:11,802 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34) 2025-08-19 00:44:11,807 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-08-19 00:44:11,807 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-08-19 00:44:11,808 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-08-19 00:44:11,808 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-08-19 00:44:11,808 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-08-19 00:44:11,808 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-08-19 00:44:11,808 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-08-19 00:44:11,808 [ scc.repo] DEBUG ## PRs found: 2025-08-19 00:44:11,893 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:12,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-08-19 00:44:12,145 [ scc.repo] DEBUG ## Branches found: 2025-08-19 00:44:12,145 [ scc.git] DEBUG Get sha1 of %s 2025-08-19 00:44:12,145 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:44:12,148 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-19 00:44:12,150 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-19 00:44:12,150 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-19 00:44:12,153 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-19 00:44:12,156 [ scc.git] DEBUG Already up to date. 2025-08-19 00:44:12,156 [ scc.git] DEBUG ## Unique users: [] 2025-08-19 00:44:12,156 [ scc.git] DEBUG Get sha1 of %s 2025-08-19 00:44:12,156 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:44:12,158 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-19 00:44:12,201 [ scc.git] DEBUG Get sha1 of %s 2025-08-19 00:44:12,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:44:12,203 [ scc.repo] DEBUG ## PRs found: 2025-08-19 00:44:12,397 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:12,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-08-19 00:44:12,986 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:13,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-08-19 00:44:13,503 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:13,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-08-19 00:44:14,001 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:14,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-08-19 00:44:14,569 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:14,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-19 00:44:15,232 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:15,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-08-19 00:44:15,783 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:16,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-08-19 00:44:16,023 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-08-19 00:44:16,023 [ scc.repo] DEBUG ## Branches found: 2025-08-19 00:44:16,023 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-08-19 00:44:16,023 [ scc.git] DEBUG Get sha1 of %s 2025-08-19 00:44:16,023 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:44:16,026 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-19 00:44:16,028 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-19 00:44:16,028 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-19 00:44:16,031 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-19 00:44:16,035 [ scc.git] DEBUG Already up to date. 2025-08-19 00:44:16,035 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-08-19 00:44:16,314 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-08-19 00:44:16,314 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-08-19 00:44:16,318 [ scc.git] DEBUG ## Unique users: [] 2025-08-19 00:44:16,318 [ scc.git] DEBUG Get sha1 of %s 2025-08-19 00:44:16,318 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:44:16,321 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-08-19 00:44:16,324 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:44:16,326 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-08-19 00:44:16,340 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-08-19 00:44:16,340 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-08-19 00:44:16,340 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-08-19 00:44:16,340 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-08-19 00:44:16,340 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-08-19 00:44:16,340 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-08-19 00:44:16,340 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-08-19 00:44:16,340 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-08-19 00:44:16,340 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-08-19 00:44:16,341 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-19 00:44:16,345 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-08-19 00:44:16,345 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-08-19 00:44:16,345 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-08-19 00:44:16,345 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-08-19 00:44:16,346 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-08-19 00:44:16,346 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-08-19 00:44:16,346 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-08-19 00:44:16,346 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-08-19 00:44:16,346 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-08-19 00:44:16,346 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-08-19 00:44:16,348 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:16,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:44:16,569 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-19 00:44:16,612 [ scc.git] DEBUG Get sha1 of %s 2025-08-19 00:44:16,612 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:44:16,614 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-19 00:44:16,654 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-19 00:44:16,658 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f36af822c90> has no local changes 2025-08-19 00:44:16,659 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#495 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/495/)' 2025-08-19 00:44:16,667 [ scc.git] DEBUG [detached HEAD 7119a06] merge master -Dorg -Ssuccess-only 2025-08-19 00:44:16,667 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-19 00:44:16,667 [ scc.repo] DEBUG ## PRs found: 2025-08-19 00:44:16,822 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:17,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-08-19 00:44:17,432 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:17,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-08-19 00:44:17,942 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:18,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2025-08-19 00:44:18,532 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:18,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-08-19 00:44:19,084 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:19,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-08-19 00:44:19,585 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:19,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-08-19 00:44:20,155 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:20,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-19 00:44:20,720 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:21,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-08-19 00:44:21,307 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:21,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-08-19 00:44:21,529 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-08-19 00:44:21,781 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:22,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-08-19 00:44:22,288 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:22,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-08-19 00:44:22,809 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:23,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-08-19 00:44:23,339 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:23,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-08-19 00:44:23,592 [ scc.repo] DEBUG ## Branches found: 2025-08-19 00:44:23,592 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-08-19 00:44:23,592 [ scc.git] DEBUG Get sha1 of %s 2025-08-19 00:44:23,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:44:23,596 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-19 00:44:23,598 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-19 00:44:23,599 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-19 00:44:23,602 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-19 00:44:23,605 [ scc.git] DEBUG Already up to date. 2025-08-19 00:44:23,605 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-08-19 00:44:23,898 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-08-19 00:44:23,898 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-08-19 00:44:23,903 [ scc.git] DEBUG ## Unique users: [] 2025-08-19 00:44:23,903 [ scc.git] DEBUG Get sha1 of %s 2025-08-19 00:44:23,903 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:44:23,905 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-08-19 00:44:23,909 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:44:23,911 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-08-19 00:44:23,920 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-08-19 00:44:23,921 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-19 00:44:23,925 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-08-19 00:44:23,925 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-08-19 00:44:23,925 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-08-19 00:44:23,928 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:24,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:44:24,119 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-19 00:44:24,162 [ scc.git] DEBUG Get sha1 of %s 2025-08-19 00:44:24,162 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:44:24,165 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-19 00:44:24,205 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-19 00:44:24,209 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f36b09b4450> has no local changes 2025-08-19 00:44:24,209 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#495 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/495/)' 2025-08-19 00:44:24,216 [ scc.git] DEBUG [detached HEAD a40d5a7] merge master -Dorg -Ssuccess-only 2025-08-19 00:44:24,216 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-19 00:44:24,216 [ scc.repo] DEBUG ## PRs found: 2025-08-19 00:44:24,371 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:24,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-08-19 00:44:25,046 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:25,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/472 HTTP/1.1" 200 None 2025-08-19 00:44:25,561 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:25,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/472/comments HTTP/1.1" 200 None 2025-08-19 00:44:26,075 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:26,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64 HTTP/1.1" 200 None 2025-08-19 00:44:26,666 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:26,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-19 00:44:27,164 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:27,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-19 00:44:27,739 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:27,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64 HTTP/1.1" 200 None 2025-08-19 00:44:28,246 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:28,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/fbcef67768f4e37313bc42a18b5fb078964fcf64?per_page=1 HTTP/1.1" 200 None 2025-08-19 00:44:28,737 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:29,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64 HTTP/1.1" 200 None 2025-08-19 00:44:29,283 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:29,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64/status HTTP/1.1" 200 None 2025-08-19 00:44:29,512 [ scc.repo] DEBUG - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3' 2025-08-19 00:44:29,763 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:30,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None 2025-08-19 00:44:30,307 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:30,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None 2025-08-19 00:44:30,812 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:31,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None 2025-08-19 00:44:31,334 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:31,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None 2025-08-19 00:44:31,852 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:32,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450/comments HTTP/1.1" 200 None 2025-08-19 00:44:32,396 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:32,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None 2025-08-19 00:44:32,949 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:33,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None 2025-08-19 00:44:33,233 [ scc.repo] DEBUG # ... Exclude label: exclude 2025-08-19 00:44:33,484 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:33,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-08-19 00:44:33,996 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:34,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-08-19 00:44:34,491 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:34,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-08-19 00:44:35,070 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:35,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-19 00:44:35,587 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:35,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-08-19 00:44:36,166 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:36,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 2 2025-08-19 00:44:36,400 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-08-19 00:44:36,652 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:36,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-08-19 00:44:37,207 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:37,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-08-19 00:44:37,708 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:38,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-08-19 00:44:38,258 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:38,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-19 00:44:38,791 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:39,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-19 00:44:39,336 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:39,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-08-19 00:44:39,851 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:40,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2025-08-19 00:44:40,330 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:40,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-08-19 00:44:40,902 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:41,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-19 00:44:41,385 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:41,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-08-19 00:44:41,944 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:42,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2025-08-19 00:44:42,178 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-08-19 00:44:42,429 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:42,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-08-19 00:44:42,954 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:43,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-08-19 00:44:43,486 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:43,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-08-19 00:44:44,021 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:44,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-19 00:44:44,561 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:44,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-08-19 00:44:45,118 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:45,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2 2025-08-19 00:44:45,349 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-08-19 00:44:45,601 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:45,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-08-19 00:44:46,118 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:46,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-08-19 00:44:46,648 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:47,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-08-19 00:44:47,318 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:47,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-08-19 00:44:47,852 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:48,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-08-19 00:44:48,420 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:48,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-19 00:44:48,920 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:49,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-08-19 00:44:49,414 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:49,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-08-19 00:44:49,630 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-08-19 00:44:49,630 [ scc.repo] DEBUG ## Branches found: 2025-08-19 00:44:49,630 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-08-19 00:44:49,630 [ scc.git] DEBUG Get sha1 of %s 2025-08-19 00:44:49,630 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:44:49,633 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-19 00:44:49,636 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-19 00:44:49,636 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-19 00:44:49,639 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-19 00:44:49,642 [ scc.git] DEBUG Already up to date. 2025-08-19 00:44:49,642 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-08-19 00:44:49,940 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-19 00:44:49,940 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-08-19 00:44:49,945 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-08-19 00:44:50,231 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-19 00:44:50,231 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-08-19 00:44:50,235 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-08-19 00:44:50,525 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-19 00:44:50,525 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-08-19 00:44:50,529 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-08-19 00:44:50,820 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-19 00:44:50,820 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-08-19 00:44:50,825 [ scc.git] DEBUG Calling 'git fetch origin pull/472/head' 2025-08-19 00:44:51,107 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-19 00:44:51,107 [ scc.git] DEBUG * branch refs/pull/472/head -> FETCH_HEAD 2025-08-19 00:44:51,111 [ scc.git] DEBUG ## Unique users: [] 2025-08-19 00:44:51,111 [ scc.git] DEBUG Get sha1 of %s 2025-08-19 00:44:51,111 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:44:51,114 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-08-19 00:44:51,127 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:44:51,129 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-08-19 00:44:51,153 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-08-19 00:44:51,153 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-08-19 00:44:51,154 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-19 00:44:51,159 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-08-19 00:44:51,159 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-08-19 00:44:51,159 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-08-19 00:44:51,161 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:51,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:44:51,495 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-08-19 00:44:51,508 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:44:51,511 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-08-19 00:44:51,532 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-19 00:44:51,535 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-08-19 00:44:51,535 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-08-19 00:44:51,535 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-08-19 00:44:51,535 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-08-19 00:44:51,535 [ scc.git] DEBUG create mode 100644 connect.py 2025-08-19 00:44:51,747 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:51,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:44:51,955 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-08-19 00:44:51,969 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:44:51,971 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-08-19 00:44:51,994 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-08-19 00:44:51,996 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-19 00:44:52,000 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-08-19 00:44:52,000 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-08-19 00:44:52,207 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:52,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:44:52,411 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-08-19 00:44:52,424 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:44:52,426 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-08-19 00:44:52,461 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-08-19 00:44:52,463 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-19 00:44:52,470 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-08-19 00:44:52,470 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-08-19 00:44:52,663 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:52,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:44:52,880 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fbcef67768f4e37313bc42a18b5fb078964fcf64' 2025-08-19 00:44:52,894 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:44:52,897 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 472 (Remove PyOpenSSL injection via urllib3) fbcef67768f4e37313bc42a18b5fb078964fcf64' 2025-08-19 00:44:52,921 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-19 00:44:52,925 [ scc.git] DEBUG setup.py | 1 - 2025-08-19 00:44:52,925 [ scc.git] DEBUG src/omero/util/upgrade_check.py | 7 ------- 2025-08-19 00:44:52,925 [ scc.git] DEBUG 2 files changed, 8 deletions(-) 2025-08-19 00:44:53,132 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:53,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:44:53,336 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-19 00:44:53,378 [ scc.git] DEBUG Get sha1 of %s 2025-08-19 00:44:53,378 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:44:53,380 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-19 00:44:53,420 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-19 00:44:53,428 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f36af9299d0> has no local changes 2025-08-19 00:44:53,428 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3' Generated by OMERO-python-superbuild-push#495 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/495/)' 2025-08-19 00:44:53,435 [ scc.git] DEBUG [detached HEAD 431efb6b] merge master -Dorg -Ssuccess-only 2025-08-19 00:44:53,435 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-19 00:44:53,435 [ scc.git] INFO Overriding base-branch from master to develop 2025-08-19 00:44:53,435 [ scc.repo] DEBUG ## PRs found: 2025-08-19 00:44:53,588 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:53,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-08-19 00:44:54,211 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:54,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-08-19 00:44:54,740 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:55,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-08-19 00:44:55,264 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:55,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-08-19 00:44:55,829 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:56,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-19 00:44:56,356 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:56,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-19 00:44:56,917 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:57,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-08-19 00:44:57,452 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:57,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-08-19 00:44:57,661 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-08-19 00:44:57,913 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:58,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-08-19 00:44:58,415 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:58,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-08-19 00:44:58,988 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:59,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-08-19 00:44:59,611 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:44:59,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-19 00:45:00,108 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:00,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-08-19 00:45:00,590 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:00,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-08-19 00:45:00,807 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-08-19 00:45:01,059 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:01,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-08-19 00:45:01,619 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:01,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-08-19 00:45:02,146 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:02,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-08-19 00:45:02,652 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:02,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-08-19 00:45:02,953 [ scc.repo] DEBUG ## Branches found: 2025-08-19 00:45:02,953 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-08-19 00:45:02,953 [ scc.git] DEBUG Get sha1 of %s 2025-08-19 00:45:02,953 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:45:02,956 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-08-19 00:45:02,958 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-19 00:45:02,958 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-08-19 00:45:02,962 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-08-19 00:45:02,965 [ scc.git] DEBUG Already up to date. 2025-08-19 00:45:02,965 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-08-19 00:45:03,259 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-08-19 00:45:03,259 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-08-19 00:45:03,263 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-08-19 00:45:03,546 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-08-19 00:45:03,546 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-08-19 00:45:03,550 [ scc.git] DEBUG ## Unique users: [] 2025-08-19 00:45:03,550 [ scc.git] DEBUG Get sha1 of %s 2025-08-19 00:45:03,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:45:03,552 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-19 00:45:03,558 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:45:03,560 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-19 00:45:03,571 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-08-19 00:45:03,571 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-19 00:45:03,572 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-19 00:45:03,574 [ scc.git] DEBUG Calling 'git reset --hard 573db340d5d1429fa17c7e486206948412a7c150' 2025-08-19 00:45:03,578 [ scc.git] DEBUG HEAD is now at 573db34 Bump version: 5.9.1 → 5.9.2.dev0 2025-08-19 00:45:03,581 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:03,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:45:03,790 [ scc.git] DEBUG Calling 'git merge-base 573db340d5d1429fa17c7e486206948412a7c150 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-19 00:45:03,796 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..573db340d5d1429fa17c7e486206948412a7c150' 2025-08-19 00:45:03,800 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#495](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/495/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/495/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-08-19 00:45:03,802 [ scc.config] DEBUG Found github.token 2025-08-19 00:45:03,802 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-08-19 00:45:03,802 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-08-19 00:45:03,807 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:45:03,809 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-08-19 00:45:03,820 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-19 00:45:03,823 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-08-19 00:45:03,823 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-08-19 00:45:04,042 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:04,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:45:04,230 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-19 00:45:04,272 [ scc.git] DEBUG Get sha1 of %s 2025-08-19 00:45:04,272 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:45:04,274 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-19 00:45:04,313 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-19 00:45:04,317 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f36af9f19d0> has no local changes 2025-08-19 00:45:04,317 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#495 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/495/)' 2025-08-19 00:45:04,323 [ scc.git] DEBUG [detached HEAD 80148b1] merge master -Dorg -Ssuccess-only 2025-08-19 00:45:04,324 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-19 00:45:04,324 [ scc.repo] DEBUG ## PRs found: 2025-08-19 00:45:04,482 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:04,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-08-19 00:45:05,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:05,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/629 HTTP/1.1" 200 None 2025-08-19 00:45:05,744 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:06,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/628 HTTP/1.1" 200 None 2025-08-19 00:45:06,308 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:06,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-08-19 00:45:06,869 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:07,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-19 00:45:07,381 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:07,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-19 00:45:07,923 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:08,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-08-19 00:45:08,418 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:08,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b8c7989c9900270d7cf27523f2649bbb903c7a60?per_page=1 HTTP/1.1" 200 None 2025-08-19 00:45:08,920 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:09,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-08-19 00:45:09,471 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:09,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/status HTTP/1.1" 200 None 2025-08-19 00:45:09,727 [ scc.repo] DEBUG - PR 628 jburel 'Add protocol required since Django4' 2025-08-19 00:45:09,979 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:10,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/619 HTTP/1.1" 200 None 2025-08-19 00:45:10,563 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:10,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-08-19 00:45:11,213 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:11,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-19 00:45:11,767 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:12,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-19 00:45:12,344 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:12,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-08-19 00:45:13,011 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:13,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6dbfcebfee72e20f36a434fdc8850930d89acdac?per_page=1 HTTP/1.1" 200 None 2025-08-19 00:45:13,504 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:13,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-08-19 00:45:14,105 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:14,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/status HTTP/1.1" 200 None 2025-08-19 00:45:14,338 [ scc.repo] DEBUG - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-08-19 00:45:14,589 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:14,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None 2025-08-19 00:45:15,130 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:15,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None 2025-08-19 00:45:15,671 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:15,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None 2025-08-19 00:45:16,231 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:16,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-19 00:45:16,757 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:17,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-19 00:45:17,315 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:17,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None 2025-08-19 00:45:17,881 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:18,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/cca34cb278cac5fb8088df75cc4fe5f315810342?per_page=1 HTTP/1.1" 200 None 2025-08-19 00:45:18,361 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:18,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None 2025-08-19 00:45:18,877 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:19,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/status HTTP/1.1" 200 None 2025-08-19 00:45:19,103 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display' 2025-08-19 00:45:19,355 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:19,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None 2025-08-19 00:45:19,902 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:20,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None 2025-08-19 00:45:20,429 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:20,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-08-19 00:45:20,985 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:21,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-19 00:45:21,495 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:21,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-19 00:45:22,171 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:22,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-08-19 00:45:22,676 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:22,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None 2025-08-19 00:45:23,161 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:23,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-08-19 00:45:23,639 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:23,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None 2025-08-19 00:45:23,908 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-08-19 00:45:24,160 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:24,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-08-19 00:45:24,666 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:24,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2025-08-19 00:45:25,195 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:25,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-08-19 00:45:25,745 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:26,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-19 00:45:26,268 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:26,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-19 00:45:26,812 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:27,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-08-19 00:45:27,421 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:27,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-08-19 00:45:27,909 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:28,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-08-19 00:45:28,417 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:28,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-08-19 00:45:28,641 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-08-19 00:45:28,892 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:29,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-08-19 00:45:29,447 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:29,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-08-19 00:45:30,019 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:30,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-19 00:45:30,557 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:30,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-19 00:45:31,104 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:31,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-08-19 00:45:31,678 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:31,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-08-19 00:45:32,146 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:32,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-08-19 00:45:32,745 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:33,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-08-19 00:45:33,001 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2025-08-19 00:45:33,253 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:33,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-08-19 00:45:33,850 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:34,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-08-19 00:45:34,350 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:34,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-08-19 00:45:34,912 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:35,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-19 00:45:35,448 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:35,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-19 00:45:36,023 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:36,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-08-19 00:45:36,507 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:36,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-08-19 00:45:36,995 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:37,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-08-19 00:45:37,467 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:37,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-08-19 00:45:37,716 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-08-19 00:45:37,967 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:38,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-08-19 00:45:38,642 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:38,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-08-19 00:45:39,181 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:39,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-08-19 00:45:39,991 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:40,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-19 00:45:40,523 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:40,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-19 00:45:41,068 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:41,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-08-19 00:45:41,565 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:41,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-08-19 00:45:42,098 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:42,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-08-19 00:45:42,743 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:42,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-08-19 00:45:42,986 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-08-19 00:45:43,237 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:43,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-08-19 00:45:43,801 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:44,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-08-19 00:45:44,320 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:44,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-08-19 00:45:44,859 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:45,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-08-19 00:45:45,367 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:45,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-08-19 00:45:45,940 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:46,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-19 00:45:46,449 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:46,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-08-19 00:45:47,006 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:47,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2 2025-08-19 00:45:47,237 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-08-19 00:45:47,489 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:47,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-08-19 00:45:48,119 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:48,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-08-19 00:45:48,658 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:48,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-08-19 00:45:49,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:49,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-19 00:45:49,734 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:49,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-08-19 00:45:50,228 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:50,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2 2025-08-19 00:45:50,482 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-08-19 00:45:50,734 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:50,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-08-19 00:45:51,228 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:51,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-08-19 00:45:51,762 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:52,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-08-19 00:45:52,320 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:52,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-19 00:45:52,830 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:53,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-08-19 00:45:53,371 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:53,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06b0073db19eeccb9698860f75639084ad1b1200?per_page=1 HTTP/1.1" 200 2 2025-08-19 00:45:53,581 [ scc.repo] DEBUG - PR 168 stick 'Changes to nginx @maintenance handler' 2025-08-19 00:45:53,581 [ scc.repo] DEBUG ## Branches found: 2025-08-19 00:45:53,581 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-08-19 00:45:53,582 [ scc.git] DEBUG Get sha1 of %s 2025-08-19 00:45:53,582 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:45:53,585 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-19 00:45:53,587 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-19 00:45:53,587 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-19 00:45:53,591 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-19 00:45:53,594 [ scc.git] DEBUG Already up to date. 2025-08-19 00:45:53,594 [ scc.git] DEBUG Calling 'git fetch origin pull/168/head' 2025-08-19 00:45:53,895 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-19 00:45:53,895 [ scc.git] DEBUG * branch refs/pull/168/head -> FETCH_HEAD 2025-08-19 00:45:53,900 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-08-19 00:45:54,189 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-19 00:45:54,189 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-08-19 00:45:54,193 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-08-19 00:45:54,488 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-19 00:45:54,489 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-08-19 00:45:54,494 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-08-19 00:45:54,781 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-19 00:45:54,781 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-08-19 00:45:54,786 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-08-19 00:45:55,084 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-19 00:45:55,084 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-08-19 00:45:55,089 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-08-19 00:45:55,445 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-19 00:45:55,445 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-08-19 00:45:55,450 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-08-19 00:45:55,735 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-19 00:45:55,735 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-08-19 00:45:55,740 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-08-19 00:45:56,040 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-19 00:45:56,041 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-08-19 00:45:56,046 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head' 2025-08-19 00:45:56,337 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-19 00:45:56,337 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD 2025-08-19 00:45:56,342 [ scc.git] DEBUG Calling 'git fetch origin pull/619/head' 2025-08-19 00:45:56,629 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-19 00:45:56,629 [ scc.git] DEBUG * branch refs/pull/619/head -> FETCH_HEAD 2025-08-19 00:45:56,634 [ scc.git] DEBUG Calling 'git fetch origin pull/628/head' 2025-08-19 00:45:56,912 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-19 00:45:56,913 [ scc.git] DEBUG * branch refs/pull/628/head -> FETCH_HEAD 2025-08-19 00:45:56,917 [ scc.git] DEBUG ## Unique users: [] 2025-08-19 00:45:56,917 [ scc.git] DEBUG Get sha1 of %s 2025-08-19 00:45:56,917 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:45:56,919 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06b0073db19eeccb9698860f75639084ad1b1200' 2025-08-19 00:45:56,928 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:45:56,930 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 168 (Changes to nginx @maintenance handler) 06b0073db19eeccb9698860f75639084ad1b1200' 2025-08-19 00:45:56,951 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-19 00:45:56,956 [ scc.git] DEBUG omeroweb/templates/nginx-development.conf.template | 2 +- 2025-08-19 00:45:56,956 [ scc.git] DEBUG omeroweb/templates/nginx-location.conf.template | 3 ++- 2025-08-19 00:45:56,956 [ scc.git] DEBUG omeroweb/templates/nginx.conf.template | 2 +- 2025-08-19 00:45:56,956 [ scc.git] DEBUG test/unit/reference_templates/nginx-development-withoptions.conf | 2 +- 2025-08-19 00:45:56,956 [ scc.git] DEBUG test/unit/reference_templates/nginx-development.conf | 2 +- 2025-08-19 00:45:56,956 [ scc.git] DEBUG test/unit/reference_templates/nginx-location-withoptions.conf | 3 ++- 2025-08-19 00:45:56,956 [ scc.git] DEBUG test/unit/reference_templates/nginx-location.conf | 3 ++- 2025-08-19 00:45:56,956 [ scc.git] DEBUG test/unit/reference_templates/nginx-withoptions.conf | 2 +- 2025-08-19 00:45:56,956 [ scc.git] DEBUG test/unit/reference_templates/nginx.conf | 2 +- 2025-08-19 00:45:56,956 [ scc.git] DEBUG test/unit/test_web.py | 1 + 2025-08-19 00:45:56,956 [ scc.git] DEBUG 10 files changed, 13 insertions(+), 9 deletions(-) 2025-08-19 00:45:56,958 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:57,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:45:57,181 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-08-19 00:45:57,190 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:45:57,192 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-08-19 00:45:57,212 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-08-19 00:45:57,213 [ scc.git] DEBUG Auto-merging setup.py 2025-08-19 00:45:57,214 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-19 00:45:57,218 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-08-19 00:45:57,218 [ scc.git] DEBUG setup.py | 1 + 2025-08-19 00:45:57,218 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-08-19 00:45:57,433 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:57,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:45:57,694 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-08-19 00:45:57,704 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:45:57,706 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-08-19 00:45:57,729 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-08-19 00:45:57,729 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-08-19 00:45:57,731 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-19 00:45:57,735 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-08-19 00:45:57,735 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-08-19 00:45:57,735 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-08-19 00:45:57,946 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:58,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:45:58,646 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-08-19 00:45:58,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:45:58,658 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-08-19 00:45:58,679 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-19 00:45:58,683 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-08-19 00:45:58,683 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-19 00:45:58,898 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:59,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:45:59,102 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-08-19 00:45:59,111 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:45:59,113 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-08-19 00:45:59,133 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-19 00:45:59,137 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-08-19 00:45:59,138 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-08-19 00:45:59,354 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:45:59,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:45:59,611 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-08-19 00:45:59,620 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:45:59,622 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-08-19 00:45:59,644 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-19 00:45:59,650 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-08-19 00:45:59,650 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-08-19 00:45:59,650 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-08-19 00:45:59,650 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-08-19 00:45:59,650 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-08-19 00:45:59,650 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-08-19 00:45:59,650 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-08-19 00:45:59,650 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-08-19 00:45:59,650 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-08-19 00:45:59,650 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-08-19 00:45:59,650 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-08-19 00:45:59,650 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-08-19 00:45:59,863 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:46:00,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:46:00,063 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-08-19 00:46:00,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:46:00,076 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-08-19 00:46:00,103 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-08-19 00:46:00,104 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-19 00:46:00,111 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-08-19 00:46:00,111 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-08-19 00:46:00,111 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-08-19 00:46:00,111 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-08-19 00:46:00,315 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:46:00,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:46:00,530 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-08-19 00:46:00,540 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:46:00,542 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-08-19 00:46:00,564 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-19 00:46:00,568 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++ 2025-08-19 00:46:00,569 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++---------- 2025-08-19 00:46:00,569 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-) 2025-08-19 00:46:00,782 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:46:01,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:46:01,088 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cca34cb278cac5fb8088df75cc4fe5f315810342' 2025-08-19 00:46:01,098 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:46:01,100 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) cca34cb278cac5fb8088df75cc4fe5f315810342' 2025-08-19 00:46:01,123 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-19 00:46:01,128 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 20 ++++++++++++-- 2025-08-19 00:46:01,128 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 31 +++++++++++++++------- 2025-08-19 00:46:01,128 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 2 ++ 2025-08-19 00:46:01,128 [ scc.git] DEBUG 3 files changed, 42 insertions(+), 11 deletions(-) 2025-08-19 00:46:01,339 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:46:01,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:46:01,553 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-08-19 00:46:01,563 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:46:01,565 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 619 (Permit subpackages as app plugins) 6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-08-19 00:46:01,587 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-08-19 00:46:01,588 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-19 00:46:01,592 [ scc.git] DEBUG omeroweb/settings.py | 9 ++++----- 2025-08-19 00:46:01,592 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 5 deletions(-) 2025-08-19 00:46:01,805 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:46:02,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:46:02,068 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8c7989c9900270d7cf27523f2649bbb903c7a60' 2025-08-19 00:46:02,078 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:46:02,080 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 628 (Add protocol required since Django4) b8c7989c9900270d7cf27523f2649bbb903c7a60' 2025-08-19 00:46:02,102 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-08-19 00:46:02,103 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-19 00:46:02,107 [ scc.git] DEBUG omeroweb/settings.py | 4 ++-- 2025-08-19 00:46:02,107 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2025-08-19 00:46:02,320 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:46:02,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:46:02,520 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-19 00:46:02,561 [ scc.git] DEBUG Get sha1 of %s 2025-08-19 00:46:02,561 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-19 00:46:02,563 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-19 00:46:02,603 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-19 00:46:02,611 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f36afb10750> has no local changes 2025-08-19 00:46:02,611 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) Already up to date. Merged PRs: - PR 168 stick 'Changes to nginx @maintenance handler' - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 628 jburel 'Add protocol required since Django4' Generated by OMERO-python-superbuild-push#495 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/495/)' 2025-08-19 00:46:02,622 [ scc.git] DEBUG [detached HEAD 1adc6a130] merge master -Dorg -Ssuccess-only 2025-08-19 00:46:02,622 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-19 00:46:02,622 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-19 00:46:02,673 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-08-19 00:46:02,772 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:46:02,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:46:02,991 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-08-19 00:46:03,236 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:46:03,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:46:03,447 [ scc.config] DEBUG Found submodule.omero-py.url 2025-08-19 00:46:03,692 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:46:03,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:46:03,914 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-08-19 00:46:04,160 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:46:04,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:46:04,380 [ scc.config] DEBUG Found submodule.omero-web.url 2025-08-19 00:46:04,625 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-19 00:46:04,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-19 00:46:04,839 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-19 00:46:04,868 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f36af820b90> has local changes 2025-08-19 00:46:04,868 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) Already up to date. Merged PRs: - PR 168 stick 'Changes to nginx @maintenance handler' - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 628 jburel 'Add protocol required since Django4' Generated by OMERO-python-superbuild-push#495 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/495/)' 2025-08-19 00:46:04,877 [ scc.git] DEBUG [detached HEAD 03a1c5f] merge master -Dorg -Ssuccess-only 2025-08-19 00:46:04,877 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-08-19 00:46:04,877 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-08-19 00:46:04,877 [ scc.merge] INFO Already up to date. 2025-08-19 00:46:04,877 [ scc.merge] INFO 2025-08-19 00:46:04,877 [ scc.merge] INFO 2025-08-19 00:46:04,877 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-08-19 00:46:04,877 [ scc.merge] INFO Already up to date. 2025-08-19 00:46:04,877 [ scc.merge] INFO 2025-08-19 00:46:04,877 [ scc.merge] INFO Merged PRs: 2025-08-19 00:46:04,877 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-08-19 00:46:04,877 [ scc.merge] INFO 2025-08-19 00:46:04,877 [ scc.merge] INFO Repository: ome/omero-marshal 2025-08-19 00:46:04,877 [ scc.merge] INFO Excluded PRs: 2025-08-19 00:46:04,877 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-08-19 00:46:04,877 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-08-19 00:46:04,877 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-08-19 00:46:04,877 [ scc.merge] INFO Already up to date. 2025-08-19 00:46:04,877 [ scc.merge] INFO 2025-08-19 00:46:04,877 [ scc.merge] INFO Merged PRs: 2025-08-19 00:46:04,877 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-08-19 00:46:04,877 [ scc.merge] INFO 2025-08-19 00:46:04,878 [ scc.merge] INFO Repository: ome/omero-py 2025-08-19 00:46:04,878 [ scc.merge] INFO Excluded PRs: 2025-08-19 00:46:04,878 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric) 2025-08-19 00:46:04,878 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) 2025-08-19 00:46:04,878 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric) 2025-08-19 00:46:04,878 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) 2025-08-19 00:46:04,878 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-08-19 00:46:04,878 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) 2025-08-19 00:46:04,878 [ scc.merge] INFO Already up to date. 2025-08-19 00:46:04,878 [ scc.merge] INFO 2025-08-19 00:46:04,878 [ scc.merge] INFO Merged PRs: 2025-08-19 00:46:04,878 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-08-19 00:46:04,878 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-08-19 00:46:04,878 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-08-19 00:46:04,878 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-08-19 00:46:04,878 [ scc.merge] INFO - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3' 2025-08-19 00:46:04,878 [ scc.merge] INFO 2025-08-19 00:46:04,878 [ scc.merge] INFO Repository: ome/omero-scripts 2025-08-19 00:46:04,878 [ scc.merge] INFO Excluded PRs: 2025-08-19 00:46:04,878 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-08-19 00:46:04,878 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-08-19 00:46:04,878 [ scc.merge] INFO Already up to date. 2025-08-19 00:46:04,878 [ scc.merge] INFO 2025-08-19 00:46:04,878 [ scc.merge] INFO Merged PRs: 2025-08-19 00:46:04,878 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-08-19 00:46:04,878 [ scc.merge] INFO 2025-08-19 00:46:04,878 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-19 00:46:04,878 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-08-19 00:46:04,878 [ scc.merge] INFO 2025-08-19 00:46:04,878 [ scc.merge] INFO Repository: ome/omero-web 2025-08-19 00:46:04,878 [ scc.merge] INFO Excluded PRs: 2025-08-19 00:46:04,878 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-08-19 00:46:04,878 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-08-19 00:46:04,878 [ scc.merge] INFO Already up to date. 2025-08-19 00:46:04,878 [ scc.merge] INFO 2025-08-19 00:46:04,878 [ scc.merge] INFO Merged PRs: 2025-08-19 00:46:04,878 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' 2025-08-19 00:46:04,879 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-08-19 00:46:04,879 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-08-19 00:46:04,879 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-08-19 00:46:04,879 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-08-19 00:46:04,879 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2025-08-19 00:46:04,879 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-08-19 00:46:04,879 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-08-19 00:46:04,879 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2025-08-19 00:46:04,879 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-08-19 00:46:04,879 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4' 2025-08-19 00:46:04,879 [ scc.merge] INFO 2025-08-19 00:46:04,879 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-08-19 00:46:04,879 [ scc.git] DEBUG Calling 'git remote' 2025-08-19 00:46:04,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-08-19 00:46:04,881 [ scc.git] DEBUG Calling 'git remote' 2025-08-19 00:46:04,884 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-19 00:46:04,884 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-08-19 00:46:04,884 [ scc.git] DEBUG Calling 'git remote' 2025-08-19 00:46:04,886 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-19 00:46:04,886 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-08-19 00:46:04,886 [ scc.git] DEBUG Calling 'git remote' 2025-08-19 00:46:04,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-19 00:46:04,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-08-19 00:46:04,888 [ scc.git] DEBUG Calling 'git remote' 2025-08-19 00:46:04,891 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-19 00:46:04,891 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-08-19 00:46:04,891 [ scc.git] DEBUG Calling 'git remote' 2025-08-19 00:46:04,893 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 6d44f66 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 70b6235a nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 573db34 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 2a7c4d2e3 nothing to commit, working tree clean HEAD detached from e505e49 nothing to commit, working tree clean 2025-08-19 00:46:37,442 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS