Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-08-22 00:42:40,945 [ scc.config] DEBUG Found github.token
2025-08-22 00:42:40,946 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:41,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:42:41,421 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:41,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:42:41,910 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:42,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-08-22 00:42:42,106 [ scc.gh] DEBUG 4657 remaining from 5000 (Reset at 01:08
2025-08-22 00:42:42,107 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-22 00:42:42,109 [ scc.git] DEBUG Check current status
2025-08-22 00:42:42,109 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-22 00:42:42,112 [ scc.git] DEBUG e505e49 Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235
2025-08-22 00:42:42,112 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-22 00:42:42,156 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-08-22 00:42:42,159 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-08-22 00:42:42,164 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a)
2025-08-22 00:42:42,170 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34)
2025-08-22 00:42:42,174 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2025-08-22 00:42:42,177 [ scc.config] DEBUG Found remote.origin.url
2025-08-22 00:42:42,358 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:42,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2025-08-22 00:42:42,963 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:43,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-22 00:42:43,506 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:43,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-22 00:42:44,075 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:44,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-22 00:42:44,560 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:44,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-22 00:42:44,763 [ scc.git] DEBUG Resetting...
2025-08-22 00:42:44,763 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-08-22 00:42:44,768 [ scc.git] DEBUG HEAD is now at e505e49 Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235
2025-08-22 00:42:44,768 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-08-22 00:42:44,826 [ scc.git] DEBUG Check current status
2025-08-22 00:42:44,826 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-22 00:42:44,829 [ scc.git] DEBUG e505e49 Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235
2025-08-22 00:42:44,829 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-22 00:42:44,871 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-08-22 00:42:44,875 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-08-22 00:42:44,880 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a)
2025-08-22 00:42:44,884 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34)
2025-08-22 00:42:44,889 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2025-08-22 00:42:44,889 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-08-22 00:42:44,890 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-08-22 00:42:44,890 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-08-22 00:42:44,890 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-08-22 00:42:44,890 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-08-22 00:42:44,890 [ scc.repo] DEBUG ## PRs found:
2025-08-22 00:42:45,015 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:45,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2025-08-22 00:42:45,233 [ scc.repo] DEBUG ## Branches found:
2025-08-22 00:42:45,233 [ scc.git] DEBUG Get sha1 of %s
2025-08-22 00:42:45,233 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:42:45,235 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-22 00:42:45,238 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-22 00:42:45,238 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-22 00:42:45,241 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-22 00:42:45,243 [ scc.git] DEBUG Already up to date.
2025-08-22 00:42:45,243 [ scc.git] DEBUG ## Unique users: []
2025-08-22 00:42:45,243 [ scc.git] DEBUG Get sha1 of %s
2025-08-22 00:42:45,244 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:42:45,246 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-22 00:42:45,289 [ scc.git] DEBUG Get sha1 of %s
2025-08-22 00:42:45,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:42:45,291 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-22 00:42:45,326 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f44ff52d7d0> has no local changes
2025-08-22 00:42:45,326 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Generated by OMERO-python-superbuild-push#498 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/498/)'
2025-08-22 00:42:45,352 [ scc.git] DEBUG [detached HEAD ea6af95] merge master -Dorg -Snone
2025-08-22 00:42:45,352 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2025-08-22 00:42:45,352 [ scc.merge] INFO Already up to date.
2025-08-22 00:42:45,352 [ scc.merge] INFO
2025-08-22 00:42:45,352 [ scc.merge] INFO
2025-08-22 00:42:45,352 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-08-22 00:42:45,352 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2025-08-22 00:42:47,279 [ scc.config] DEBUG Found github.token
2025-08-22 00:42:47,281 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:47,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:42:47,778 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:47,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:42:48,234 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:48,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-08-22 00:42:48,437 [ scc.gh] DEBUG 4649 remaining from 5000 (Reset at 01:08
2025-08-22 00:42:48,438 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-22 00:42:48,441 [ scc.git] DEBUG Check current status
2025-08-22 00:42:48,441 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-22 00:42:48,443 [ scc.git] DEBUG ea6af95 merge master -Dorg -Snone
2025-08-22 00:42:48,443 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-22 00:42:48,488 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-08-22 00:42:48,491 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-08-22 00:42:48,496 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a)
2025-08-22 00:42:48,501 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34)
2025-08-22 00:42:48,505 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2025-08-22 00:42:48,508 [ scc.config] DEBUG Found remote.origin.url
2025-08-22 00:42:48,508 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2025-08-22 00:42:48,510 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2025-08-22 00:42:48,690 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:49,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2025-08-22 00:42:49,273 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:49,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-22 00:42:49,834 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:50,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-22 00:42:50,320 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:50,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-22 00:42:50,772 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:50,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-22 00:42:50,988 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-22 00:42:51,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2025-08-22 00:42:51,041 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-22 00:42:51,043 [ scc.git] DEBUG Check current status
2025-08-22 00:42:51,043 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-22 00:42:51,046 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build
2025-08-22 00:42:51,046 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-22 00:42:51,089 [ scc.config] DEBUG Found remote.origin.url
2025-08-22 00:42:51,240 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:51,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2025-08-22 00:42:51,801 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:52,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-22 00:42:52,331 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:52,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-22 00:42:52,824 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:53,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-22 00:42:53,302 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:53,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-22 00:42:53,512 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-22 00:42:53,554 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-22 00:42:53,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2025-08-22 00:42:53,555 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-22 00:42:53,558 [ scc.git] DEBUG Check current status
2025-08-22 00:42:53,558 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-22 00:42:53,560 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build
2025-08-22 00:42:53,561 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-22 00:42:53,604 [ scc.config] DEBUG Found remote.origin.url
2025-08-22 00:42:53,764 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:54,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2025-08-22 00:42:54,334 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:54,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-22 00:42:54,860 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:55,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-22 00:42:55,315 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:55,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-22 00:42:55,791 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:56,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-22 00:42:56,046 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-22 00:42:56,089 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-22 00:42:56,090 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2025-08-22 00:42:56,090 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-22 00:42:56,092 [ scc.git] DEBUG Check current status
2025-08-22 00:42:56,092 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-22 00:42:56,095 [ scc.git] DEBUG 70b6235a Merge pull request #464 from dominikl/map_anno_wrapper
2025-08-22 00:42:56,095 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-22 00:42:56,139 [ scc.config] DEBUG Found remote.origin.url
2025-08-22 00:42:56,298 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:56,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2025-08-22 00:42:56,871 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:57,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-22 00:42:57,375 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:57,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-22 00:42:57,855 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:58,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-22 00:42:58,328 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:58,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-22 00:42:58,555 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-22 00:42:58,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-22 00:42:58,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2025-08-22 00:42:58,599 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-22 00:42:58,601 [ scc.git] DEBUG Check current status
2025-08-22 00:42:58,601 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-22 00:42:58,604 [ scc.git] DEBUG 573db34 Bump version: 5.9.1 → 5.9.2.dev0
2025-08-22 00:42:58,604 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-22 00:42:58,648 [ scc.config] DEBUG Found remote.origin.url
2025-08-22 00:42:58,649 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2025-08-22 00:42:58,807 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:59,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2025-08-22 00:42:59,369 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:42:59,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-22 00:42:59,881 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:00,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-22 00:43:00,362 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:00,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-22 00:43:00,846 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:01,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-22 00:43:01,087 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-22 00:43:01,130 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-22 00:43:01,131 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2025-08-22 00:43:01,131 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-22 00:43:01,133 [ scc.git] DEBUG Check current status
2025-08-22 00:43:01,134 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-22 00:43:01,136 [ scc.git] DEBUG 2a7c4d2e3 Bump version: 5.29.2 → 5.29.3.dev0
2025-08-22 00:43:01,137 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-22 00:43:01,179 [ scc.config] DEBUG Found remote.origin.url
2025-08-22 00:43:01,339 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:01,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2025-08-22 00:43:01,895 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:02,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-22 00:43:02,447 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:02,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-22 00:43:02,923 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:03,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-22 00:43:03,390 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:03,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-22 00:43:03,593 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-22 00:43:03,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-22 00:43:03,636 [ scc.git] DEBUG Resetting...
2025-08-22 00:43:03,636 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-08-22 00:43:03,640 [ scc.git] DEBUG HEAD is now at ea6af95 merge master -Dorg -Snone
2025-08-22 00:43:03,640 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-08-22 00:43:03,696 [ scc.git] DEBUG Check current status
2025-08-22 00:43:03,696 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-22 00:43:03,698 [ scc.git] DEBUG ea6af95 merge master -Dorg -Snone
2025-08-22 00:43:03,699 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-22 00:43:03,742 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-08-22 00:43:03,746 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-08-22 00:43:03,751 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a)
2025-08-22 00:43:03,755 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34)
2025-08-22 00:43:03,759 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2025-08-22 00:43:03,760 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-08-22 00:43:03,760 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-08-22 00:43:03,760 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-08-22 00:43:03,760 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-08-22 00:43:03,761 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-08-22 00:43:03,761 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2025-08-22 00:43:03,761 [ scc.repo] DEBUG ## PRs found:
2025-08-22 00:43:03,845 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:04,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2025-08-22 00:43:04,110 [ scc.repo] DEBUG ## Branches found:
2025-08-22 00:43:04,110 [ scc.git] DEBUG Get sha1 of %s
2025-08-22 00:43:04,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:43:04,113 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-22 00:43:04,115 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-22 00:43:04,115 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-22 00:43:04,118 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-22 00:43:04,121 [ scc.git] DEBUG Already up to date.
2025-08-22 00:43:04,121 [ scc.git] DEBUG ## Unique users: []
2025-08-22 00:43:04,121 [ scc.git] DEBUG Get sha1 of %s
2025-08-22 00:43:04,121 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:43:04,123 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-22 00:43:04,165 [ scc.git] DEBUG Get sha1 of %s
2025-08-22 00:43:04,165 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:43:04,167 [ scc.repo] DEBUG ## PRs found:
2025-08-22 00:43:04,363 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:04,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2025-08-22 00:43:04,948 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:05,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2025-08-22 00:43:05,474 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:05,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2025-08-22 00:43:05,963 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:06,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2025-08-22 00:43:06,585 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:06,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-22 00:43:07,071 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:07,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2025-08-22 00:43:07,735 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:07,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2025-08-22 00:43:07,964 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2025-08-22 00:43:07,964 [ scc.repo] DEBUG ## Branches found:
2025-08-22 00:43:07,964 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2025-08-22 00:43:07,965 [ scc.git] DEBUG Get sha1 of %s
2025-08-22 00:43:07,965 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:43:07,967 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-22 00:43:07,970 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-22 00:43:07,970 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-22 00:43:07,973 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-22 00:43:07,977 [ scc.git] DEBUG Already up to date.
2025-08-22 00:43:07,977 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2025-08-22 00:43:08,258 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2025-08-22 00:43:08,258 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2025-08-22 00:43:08,262 [ scc.git] DEBUG ## Unique users: []
2025-08-22 00:43:08,262 [ scc.git] DEBUG Get sha1 of %s
2025-08-22 00:43:08,262 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:43:08,265 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2025-08-22 00:43:08,268 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:43:08,271 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2025-08-22 00:43:08,284 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2025-08-22 00:43:08,284 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2025-08-22 00:43:08,284 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2025-08-22 00:43:08,284 [ scc.git] DEBUG Auto-merging src/fsLists.py
2025-08-22 00:43:08,284 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2025-08-22 00:43:08,284 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2025-08-22 00:43:08,284 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2025-08-22 00:43:08,284 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2025-08-22 00:43:08,285 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2025-08-22 00:43:08,286 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-22 00:43:08,290 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2025-08-22 00:43:08,290 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2025-08-22 00:43:08,290 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2025-08-22 00:43:08,290 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2025-08-22 00:43:08,290 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2025-08-22 00:43:08,290 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2025-08-22 00:43:08,290 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2025-08-22 00:43:08,290 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2025-08-22 00:43:08,290 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2025-08-22 00:43:08,290 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2025-08-22 00:43:08,293 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:08,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:43:08,473 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-22 00:43:08,516 [ scc.git] DEBUG Get sha1 of %s
2025-08-22 00:43:08,516 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:43:08,518 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-22 00:43:08,559 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-22 00:43:08,563 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f92e4f5ef10> has no local changes
2025-08-22 00:43:08,563 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#498 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/498/)'
2025-08-22 00:43:08,571 [ scc.git] DEBUG [detached HEAD e27152d] merge master -Dorg -Ssuccess-only
2025-08-22 00:43:08,571 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-22 00:43:08,572 [ scc.repo] DEBUG ## PRs found:
2025-08-22 00:43:08,726 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:09,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2025-08-22 00:43:09,356 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:09,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None
2025-08-22 00:43:09,874 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:10,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None
2025-08-22 00:43:10,407 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:10,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2025-08-22 00:43:10,938 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:11,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2025-08-22 00:43:11,447 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:11,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2025-08-22 00:43:12,024 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:12,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-22 00:43:12,532 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:12,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2025-08-22 00:43:13,191 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:13,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2025-08-22 00:43:13,446 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2025-08-22 00:43:13,698 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:13,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2025-08-22 00:43:14,236 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:14,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2025-08-22 00:43:14,723 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:14,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2025-08-22 00:43:15,219 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:15,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2025-08-22 00:43:15,468 [ scc.repo] DEBUG ## Branches found:
2025-08-22 00:43:15,468 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2025-08-22 00:43:15,468 [ scc.git] DEBUG Get sha1 of %s
2025-08-22 00:43:15,468 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:43:15,471 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-22 00:43:15,473 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-22 00:43:15,474 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-22 00:43:15,476 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-22 00:43:15,480 [ scc.git] DEBUG Already up to date.
2025-08-22 00:43:15,480 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2025-08-22 00:43:15,772 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2025-08-22 00:43:15,772 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2025-08-22 00:43:15,776 [ scc.git] DEBUG ## Unique users: []
2025-08-22 00:43:15,776 [ scc.git] DEBUG Get sha1 of %s
2025-08-22 00:43:15,776 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:43:15,778 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2025-08-22 00:43:15,782 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:43:15,784 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2025-08-22 00:43:15,794 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2025-08-22 00:43:15,795 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-22 00:43:15,798 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2025-08-22 00:43:15,798 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2025-08-22 00:43:15,799 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2025-08-22 00:43:15,801 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:16,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:43:16,016 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-22 00:43:16,059 [ scc.git] DEBUG Get sha1 of %s
2025-08-22 00:43:16,059 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:43:16,062 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-22 00:43:16,103 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-22 00:43:16,107 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f92e278c0d0> has no local changes
2025-08-22 00:43:16,107 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#498 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/498/)'
2025-08-22 00:43:16,113 [ scc.git] DEBUG [detached HEAD 8556886] merge master -Dorg -Ssuccess-only
2025-08-22 00:43:16,114 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-22 00:43:16,114 [ scc.repo] DEBUG ## PRs found:
2025-08-22 00:43:16,269 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-08-22 00:43:19,202 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-08-22 00:43:19,729 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-08-22 00:43:20,308 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-08-22 00:43:20,783 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:21,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64 HTTP/1.1" 200 None
2025-08-22 00:43:21,352 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-08-22 00:43:21,619 [ scc.repo] DEBUG - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3'
2025-08-22 00:43:21,871 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:22,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None
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2025-08-22 00:43:22,952 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:23,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None
2025-08-22 00:43:23,463 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:23,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None
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2025-08-22 00:43:24,497 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-08-22 00:43:25,027 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-08-22 00:43:25,297 [ scc.repo] DEBUG # ... Exclude label: exclude
2025-08-22 00:43:25,548 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:25,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2025-08-22 00:43:26,084 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-08-22 00:43:26,560 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-08-22 00:43:27,142 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-08-22 00:43:27,632 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-08-22 00:43:28,109 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-08-22 00:43:28,356 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2025-08-22 00:43:28,608 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:28,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2025-08-22 00:43:29,117 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-08-22 00:43:29,635 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-08-22 00:43:30,251 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-08-22 00:43:30,843 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-08-22 00:43:31,379 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:31,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2025-08-22 00:43:31,888 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:32,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None
2025-08-22 00:43:32,390 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:32,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2025-08-22 00:43:32,930 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:33,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-22 00:43:33,434 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:33,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2025-08-22 00:43:34,026 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:34,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2
2025-08-22 00:43:34,221 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2025-08-22 00:43:34,473 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:34,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2025-08-22 00:43:35,004 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:35,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2025-08-22 00:43:35,530 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:35,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2025-08-22 00:43:36,083 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:36,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-22 00:43:36,587 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:36,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2025-08-22 00:43:37,120 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:37,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2
2025-08-22 00:43:37,352 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2025-08-22 00:43:37,604 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:37,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2025-08-22 00:43:38,131 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:38,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2025-08-22 00:43:38,640 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:38,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2025-08-22 00:43:39,192 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:39,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2025-08-22 00:43:39,811 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:40,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2025-08-22 00:43:40,372 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:40,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-22 00:43:40,889 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:41,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2025-08-22 00:43:41,367 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:41,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2025-08-22 00:43:41,579 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2025-08-22 00:43:41,580 [ scc.repo] DEBUG ## Branches found:
2025-08-22 00:43:41,580 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2025-08-22 00:43:41,580 [ scc.git] DEBUG Get sha1 of %s
2025-08-22 00:43:41,580 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:43:41,583 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-22 00:43:41,586 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-22 00:43:41,586 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-22 00:43:41,589 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-22 00:43:41,592 [ scc.git] DEBUG Already up to date.
2025-08-22 00:43:41,592 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2025-08-22 00:43:41,908 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-08-22 00:43:41,908 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2025-08-22 00:43:41,912 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2025-08-22 00:43:42,537 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-08-22 00:43:42,537 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2025-08-22 00:43:42,541 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2025-08-22 00:43:42,822 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-08-22 00:43:42,822 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2025-08-22 00:43:42,827 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2025-08-22 00:43:43,112 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-08-22 00:43:43,112 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2025-08-22 00:43:43,117 [ scc.git] DEBUG Calling 'git fetch origin pull/472/head'
2025-08-22 00:43:43,396 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-08-22 00:43:43,396 [ scc.git] DEBUG * branch refs/pull/472/head -> FETCH_HEAD
2025-08-22 00:43:43,401 [ scc.git] DEBUG ## Unique users: []
2025-08-22 00:43:43,401 [ scc.git] DEBUG Get sha1 of %s
2025-08-22 00:43:43,401 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:43:43,403 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2025-08-22 00:43:43,416 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:43:43,419 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2025-08-22 00:43:43,442 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2025-08-22 00:43:43,442 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2025-08-22 00:43:43,444 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-22 00:43:43,448 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2025-08-22 00:43:43,448 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2025-08-22 00:43:43,448 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2025-08-22 00:43:43,451 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:43,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:43:43,663 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2025-08-22 00:43:43,676 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:43:43,678 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2025-08-22 00:43:43,699 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-22 00:43:43,702 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2025-08-22 00:43:43,702 [ scc.git] DEBUG connect.py | 11 +++++++++++
2025-08-22 00:43:43,702 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2025-08-22 00:43:43,702 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2025-08-22 00:43:43,702 [ scc.git] DEBUG create mode 100644 connect.py
2025-08-22 00:43:43,915 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:44,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:43:44,133 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2025-08-22 00:43:44,147 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:43:44,149 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2025-08-22 00:43:44,173 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2025-08-22 00:43:44,174 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-22 00:43:44,178 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2025-08-22 00:43:44,178 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2025-08-22 00:43:44,385 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:44,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:43:44,580 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2025-08-22 00:43:44,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:43:44,595 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2025-08-22 00:43:44,630 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2025-08-22 00:43:44,631 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-22 00:43:44,638 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2025-08-22 00:43:44,638 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2025-08-22 00:43:44,832 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:45,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:43:45,024 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fbcef67768f4e37313bc42a18b5fb078964fcf64'
2025-08-22 00:43:45,037 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:43:45,039 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 472 (Remove PyOpenSSL injection via urllib3) fbcef67768f4e37313bc42a18b5fb078964fcf64'
2025-08-22 00:43:45,061 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-22 00:43:45,065 [ scc.git] DEBUG setup.py | 1 -
2025-08-22 00:43:45,065 [ scc.git] DEBUG src/omero/util/upgrade_check.py | 7 -------
2025-08-22 00:43:45,065 [ scc.git] DEBUG 2 files changed, 8 deletions(-)
2025-08-22 00:43:45,275 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:45,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:43:45,483 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-22 00:43:45,526 [ scc.git] DEBUG Get sha1 of %s
2025-08-22 00:43:45,526 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:43:45,528 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-22 00:43:45,570 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-22 00:43:45,576 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f92e2787a90> has no local changes
2025-08-22 00:43:45,576 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
- PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
- PR 450 multimeric 'Add model stubs' (user: multimeric)
- PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 332 jburel 'Build conda'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 472 sbesson 'Remove PyOpenSSL injection via urllib3'
Generated by OMERO-python-superbuild-push#498 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/498/)'
2025-08-22 00:43:45,584 [ scc.git] DEBUG [detached HEAD 93e5531b] merge master -Dorg -Ssuccess-only
2025-08-22 00:43:45,584 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-22 00:43:45,584 [ scc.git] INFO Overriding base-branch from master to develop
2025-08-22 00:43:45,585 [ scc.repo] DEBUG ## PRs found:
2025-08-22 00:43:45,735 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:46,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2025-08-22 00:43:46,374 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:46,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2025-08-22 00:43:46,884 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:47,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2025-08-22 00:43:47,428 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:47,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-08-22 00:43:48,041 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:48,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-22 00:43:48,575 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:48,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-22 00:43:49,113 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:49,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-08-22 00:43:49,596 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:49,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2025-08-22 00:43:49,846 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-08-22 00:43:50,098 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:50,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2025-08-22 00:43:50,627 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:50,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2025-08-22 00:43:51,144 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:51,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-08-22 00:43:51,692 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:51,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-22 00:43:52,204 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:52,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-08-22 00:43:52,766 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:52,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2025-08-22 00:43:52,995 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-08-22 00:43:53,247 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:53,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2025-08-22 00:43:53,792 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:54,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2025-08-22 00:43:54,321 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:54,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2025-08-22 00:43:54,859 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:55,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2025-08-22 00:43:55,119 [ scc.repo] DEBUG ## Branches found:
2025-08-22 00:43:55,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2025-08-22 00:43:55,120 [ scc.git] DEBUG Get sha1 of %s
2025-08-22 00:43:55,120 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:43:55,123 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2025-08-22 00:43:55,125 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-22 00:43:55,125 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2025-08-22 00:43:55,129 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2025-08-22 00:43:55,132 [ scc.git] DEBUG Already up to date.
2025-08-22 00:43:55,132 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2025-08-22 00:43:55,422 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2025-08-22 00:43:55,422 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2025-08-22 00:43:55,426 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2025-08-22 00:43:55,705 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2025-08-22 00:43:55,705 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2025-08-22 00:43:55,710 [ scc.git] DEBUG ## Unique users: []
2025-08-22 00:43:55,710 [ scc.git] DEBUG Get sha1 of %s
2025-08-22 00:43:55,710 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:43:55,713 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-08-22 00:43:55,718 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:43:55,720 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-08-22 00:43:55,731 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree.
2025-08-22 00:43:55,731 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-22 00:43:55,732 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-22 00:43:55,734 [ scc.git] DEBUG Calling 'git reset --hard 573db340d5d1429fa17c7e486206948412a7c150'
2025-08-22 00:43:55,738 [ scc.git] DEBUG HEAD is now at 573db34 Bump version: 5.9.1 → 5.9.2.dev0
2025-08-22 00:43:55,741 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:55,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:43:55,935 [ scc.git] DEBUG Calling 'git merge-base 573db340d5d1429fa17c7e486206948412a7c150 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-08-22 00:43:55,940 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..573db340d5d1429fa17c7e486206948412a7c150'
2025-08-22 00:43:55,945 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#498](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/498/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/498/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2025-08-22 00:43:55,947 [ scc.config] DEBUG Found github.token
2025-08-22 00:43:55,947 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2025-08-22 00:43:55,947 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-08-22 00:43:55,952 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:43:55,954 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-08-22 00:43:55,965 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-22 00:43:55,968 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2025-08-22 00:43:55,968 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2025-08-22 00:43:56,187 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:56,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:43:56,376 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-22 00:43:56,419 [ scc.git] DEBUG Get sha1 of %s
2025-08-22 00:43:56,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:43:56,422 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-22 00:43:56,464 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-22 00:43:56,468 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f92e23fbe90> has no local changes
2025-08-22 00:43:56,468 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#498 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/498/)'
2025-08-22 00:43:56,475 [ scc.git] DEBUG [detached HEAD 5fd96c4] merge master -Dorg -Ssuccess-only
2025-08-22 00:43:56,475 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-22 00:43:56,475 [ scc.repo] DEBUG ## PRs found:
2025-08-22 00:43:56,628 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:57,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2025-08-22 00:43:57,378 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:57,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/629 HTTP/1.1" 200 None
2025-08-22 00:43:57,875 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:58,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/628 HTTP/1.1" 200 None
2025-08-22 00:43:58,373 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:58,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None
2025-08-22 00:43:58,917 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:59,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-22 00:43:59,471 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:43:59,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-22 00:44:00,052 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:00,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None
2025-08-22 00:44:00,642 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:00,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b8c7989c9900270d7cf27523f2649bbb903c7a60?per_page=1 HTTP/1.1" 200 None
2025-08-22 00:44:01,120 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:01,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None
2025-08-22 00:44:01,643 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:01,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/status HTTP/1.1" 200 None
2025-08-22 00:44:01,882 [ scc.repo] DEBUG - PR 628 jburel 'Add protocol required since Django4'
2025-08-22 00:44:02,133 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:02,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/619 HTTP/1.1" 200 None
2025-08-22 00:44:02,705 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:03,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None
2025-08-22 00:44:03,338 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:03,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-22 00:44:03,852 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:04,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-22 00:44:04,371 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:04,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None
2025-08-22 00:44:04,976 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:05,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6dbfcebfee72e20f36a434fdc8850930d89acdac?per_page=1 HTTP/1.1" 200 None
2025-08-22 00:44:05,499 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:05,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None
2025-08-22 00:44:05,985 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:06,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/status HTTP/1.1" 200 None
2025-08-22 00:44:06,209 [ scc.repo] DEBUG - PR 619 DavidStirling 'Permit subpackages as app plugins'
2025-08-22 00:44:06,461 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:06,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None
2025-08-22 00:44:06,961 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:07,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None
2025-08-22 00:44:07,487 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:07,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None
2025-08-22 00:44:08,053 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:08,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-22 00:44:08,570 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:08,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-22 00:44:09,066 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:09,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None
2025-08-22 00:44:09,605 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:09,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/cca34cb278cac5fb8088df75cc4fe5f315810342?per_page=1 HTTP/1.1" 200 None
2025-08-22 00:44:10,079 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:10,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None
2025-08-22 00:44:10,583 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:10,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/status HTTP/1.1" 200 None
2025-08-22 00:44:10,841 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display'
2025-08-22 00:44:11,092 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:11,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None
2025-08-22 00:44:11,632 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:11,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None
2025-08-22 00:44:12,149 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:12,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None
2025-08-22 00:44:12,746 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:13,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-22 00:44:13,279 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:13,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-22 00:44:13,784 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:14,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None
2025-08-22 00:44:14,338 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:14,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None
2025-08-22 00:44:14,840 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:15,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None
2025-08-22 00:44:15,387 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:15,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None
2025-08-22 00:44:15,593 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2025-08-22 00:44:15,845 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:16,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None
2025-08-22 00:44:16,369 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:16,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None
2025-08-22 00:44:16,895 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:17,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None
2025-08-22 00:44:17,430 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:17,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-22 00:44:18,048 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:18,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-22 00:44:18,583 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:18,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None
2025-08-22 00:44:19,182 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:19,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None
2025-08-22 00:44:19,650 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:19,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None
2025-08-22 00:44:20,136 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:20,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None
2025-08-22 00:44:20,399 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf'
2025-08-22 00:44:20,650 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:20,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None
2025-08-22 00:44:21,179 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:21,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None
2025-08-22 00:44:21,804 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:22,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-22 00:44:22,314 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:22,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-22 00:44:22,868 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:23,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None
2025-08-22 00:44:23,344 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:23,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None
2025-08-22 00:44:23,829 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:24,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None
2025-08-22 00:44:24,296 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:24,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None
2025-08-22 00:44:24,549 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations'
2025-08-22 00:44:24,801 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:25,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None
2025-08-22 00:44:25,305 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:25,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None
2025-08-22 00:44:25,843 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:26,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2025-08-22 00:44:26,419 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:26,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-22 00:44:26,973 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:27,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-22 00:44:27,520 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:27,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2025-08-22 00:44:27,998 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:28,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None
2025-08-22 00:44:28,483 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:28,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2025-08-22 00:44:28,954 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:29,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None
2025-08-22 00:44:29,175 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag'
2025-08-22 00:44:29,427 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:29,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None
2025-08-22 00:44:29,935 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:30,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None
2025-08-22 00:44:30,488 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:30,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2025-08-22 00:44:31,060 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:31,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-22 00:44:31,615 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:32,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-22 00:44:32,266 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:32,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2025-08-22 00:44:32,778 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:32,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None
2025-08-22 00:44:33,250 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:33,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2025-08-22 00:44:33,737 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:33,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None
2025-08-22 00:44:33,971 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters'
2025-08-22 00:44:34,223 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:34,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2025-08-22 00:44:34,721 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:34,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2025-08-22 00:44:35,231 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:35,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2025-08-22 00:44:35,750 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:36,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2025-08-22 00:44:36,265 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:36,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2025-08-22 00:44:36,816 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:37,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-22 00:44:37,296 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:37,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2025-08-22 00:44:37,869 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:38,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2
2025-08-22 00:44:38,085 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2025-08-22 00:44:38,336 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:38,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2025-08-22 00:44:38,829 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:39,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2025-08-22 00:44:39,313 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:39,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2025-08-22 00:44:39,847 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:40,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-22 00:44:40,347 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:40,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2025-08-22 00:44:40,817 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:41,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2
2025-08-22 00:44:41,046 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2025-08-22 00:44:41,298 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:41,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2025-08-22 00:44:41,799 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:42,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2025-08-22 00:44:42,297 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:42,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2025-08-22 00:44:42,874 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:43,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-22 00:44:43,376 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:43,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2025-08-22 00:44:43,910 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:44,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06b0073db19eeccb9698860f75639084ad1b1200?per_page=1 HTTP/1.1" 200 2
2025-08-22 00:44:44,140 [ scc.repo] DEBUG - PR 168 stick 'Changes to nginx @maintenance handler'
2025-08-22 00:44:44,140 [ scc.repo] DEBUG ## Branches found:
2025-08-22 00:44:44,140 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2025-08-22 00:44:44,141 [ scc.git] DEBUG Get sha1 of %s
2025-08-22 00:44:44,141 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:44:44,143 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-22 00:44:44,146 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-22 00:44:44,146 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-22 00:44:44,149 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-22 00:44:44,153 [ scc.git] DEBUG Already up to date.
2025-08-22 00:44:44,153 [ scc.git] DEBUG Calling 'git fetch origin pull/168/head'
2025-08-22 00:44:44,458 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-08-22 00:44:44,458 [ scc.git] DEBUG * branch refs/pull/168/head -> FETCH_HEAD
2025-08-22 00:44:44,463 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2025-08-22 00:44:44,752 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-08-22 00:44:44,753 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2025-08-22 00:44:44,757 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2025-08-22 00:44:45,051 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-08-22 00:44:45,051 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2025-08-22 00:44:45,056 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head'
2025-08-22 00:44:45,342 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-08-22 00:44:45,342 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD
2025-08-22 00:44:45,348 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head'
2025-08-22 00:44:45,626 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-08-22 00:44:45,626 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD
2025-08-22 00:44:45,631 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head'
2025-08-22 00:44:45,936 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-08-22 00:44:45,936 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD
2025-08-22 00:44:45,940 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head'
2025-08-22 00:44:46,230 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-08-22 00:44:46,231 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD
2025-08-22 00:44:46,235 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head'
2025-08-22 00:44:46,519 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-08-22 00:44:46,519 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD
2025-08-22 00:44:46,524 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head'
2025-08-22 00:44:46,813 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-08-22 00:44:46,814 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD
2025-08-22 00:44:46,819 [ scc.git] DEBUG Calling 'git fetch origin pull/619/head'
2025-08-22 00:44:47,101 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-08-22 00:44:47,102 [ scc.git] DEBUG * branch refs/pull/619/head -> FETCH_HEAD
2025-08-22 00:44:47,106 [ scc.git] DEBUG Calling 'git fetch origin pull/628/head'
2025-08-22 00:44:47,390 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-08-22 00:44:47,391 [ scc.git] DEBUG * branch refs/pull/628/head -> FETCH_HEAD
2025-08-22 00:44:47,395 [ scc.git] DEBUG ## Unique users: []
2025-08-22 00:44:47,396 [ scc.git] DEBUG Get sha1 of %s
2025-08-22 00:44:47,396 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:44:47,398 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06b0073db19eeccb9698860f75639084ad1b1200'
2025-08-22 00:44:47,407 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:44:47,409 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 168 (Changes to nginx @maintenance handler) 06b0073db19eeccb9698860f75639084ad1b1200'
2025-08-22 00:44:47,430 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-22 00:44:47,435 [ scc.git] DEBUG omeroweb/templates/nginx-development.conf.template | 2 +-
2025-08-22 00:44:47,435 [ scc.git] DEBUG omeroweb/templates/nginx-location.conf.template | 3 ++-
2025-08-22 00:44:47,435 [ scc.git] DEBUG omeroweb/templates/nginx.conf.template | 2 +-
2025-08-22 00:44:47,435 [ scc.git] DEBUG test/unit/reference_templates/nginx-development-withoptions.conf | 2 +-
2025-08-22 00:44:47,435 [ scc.git] DEBUG test/unit/reference_templates/nginx-development.conf | 2 +-
2025-08-22 00:44:47,435 [ scc.git] DEBUG test/unit/reference_templates/nginx-location-withoptions.conf | 3 ++-
2025-08-22 00:44:47,435 [ scc.git] DEBUG test/unit/reference_templates/nginx-location.conf | 3 ++-
2025-08-22 00:44:47,435 [ scc.git] DEBUG test/unit/reference_templates/nginx-withoptions.conf | 2 +-
2025-08-22 00:44:47,436 [ scc.git] DEBUG test/unit/reference_templates/nginx.conf | 2 +-
2025-08-22 00:44:47,437 [ scc.git] DEBUG test/unit/test_web.py | 1 +
2025-08-22 00:44:47,437 [ scc.git] DEBUG 10 files changed, 13 insertions(+), 9 deletions(-)
2025-08-22 00:44:47,438 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:47,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:44:47,623 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2025-08-22 00:44:47,632 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:44:47,634 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2025-08-22 00:44:47,655 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2025-08-22 00:44:47,655 [ scc.git] DEBUG Auto-merging setup.py
2025-08-22 00:44:47,657 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-22 00:44:47,661 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2025-08-22 00:44:47,661 [ scc.git] DEBUG setup.py | 1 +
2025-08-22 00:44:47,661 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2025-08-22 00:44:47,875 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:48,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:44:48,070 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2025-08-22 00:44:48,079 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:44:48,081 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2025-08-22 00:44:48,105 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2025-08-22 00:44:48,105 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2025-08-22 00:44:48,107 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-22 00:44:48,111 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2025-08-22 00:44:48,111 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2025-08-22 00:44:48,111 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2025-08-22 00:44:48,322 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:48,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:44:48,511 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb'
2025-08-22 00:44:48,521 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:44:48,523 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb'
2025-08-22 00:44:48,545 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-22 00:44:48,549 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +-
2025-08-22 00:44:48,549 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-08-22 00:44:48,764 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:48,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:44:48,950 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8'
2025-08-22 00:44:48,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:44:48,961 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8'
2025-08-22 00:44:48,983 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-22 00:44:48,987 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++--
2025-08-22 00:44:48,987 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-)
2025-08-22 00:44:49,202 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:49,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:44:49,403 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539'
2025-08-22 00:44:49,412 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:44:49,414 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539'
2025-08-22 00:44:49,438 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-22 00:44:49,444 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 -
2025-08-22 00:44:49,444 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++--
2025-08-22 00:44:49,444 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++-
2025-08-22 00:44:49,444 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +-
2025-08-22 00:44:49,444 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++-
2025-08-22 00:44:49,444 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++--
2025-08-22 00:44:49,444 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++--
2025-08-22 00:44:49,444 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++-----
2025-08-22 00:44:49,444 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 +
2025-08-22 00:44:49,444 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +-
2025-08-22 00:44:49,444 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++--
2025-08-22 00:44:49,445 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-)
2025-08-22 00:44:49,655 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:49,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:44:49,851 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2025-08-22 00:44:49,860 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:44:49,862 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2025-08-22 00:44:49,890 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2025-08-22 00:44:49,891 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-22 00:44:49,898 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------
2025-08-22 00:44:49,898 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +---
2025-08-22 00:44:49,898 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 -----------------
2025-08-22 00:44:49,898 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-)
2025-08-22 00:44:50,102 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:50,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:44:50,310 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26'
2025-08-22 00:44:50,320 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:44:50,322 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26'
2025-08-22 00:44:50,346 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-22 00:44:50,350 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++
2025-08-22 00:44:50,350 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++----------
2025-08-22 00:44:50,350 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-)
2025-08-22 00:44:50,562 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:50,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:44:50,762 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cca34cb278cac5fb8088df75cc4fe5f315810342'
2025-08-22 00:44:50,772 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:44:50,774 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) cca34cb278cac5fb8088df75cc4fe5f315810342'
2025-08-22 00:44:50,796 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-22 00:44:50,800 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 20 ++++++++++++--
2025-08-22 00:44:50,800 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 31 +++++++++++++++-------
2025-08-22 00:44:50,800 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 2 ++
2025-08-22 00:44:50,801 [ scc.git] DEBUG 3 files changed, 42 insertions(+), 11 deletions(-)
2025-08-22 00:44:51,014 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:51,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:44:51,243 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dbfcebfee72e20f36a434fdc8850930d89acdac'
2025-08-22 00:44:51,253 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:44:51,255 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 619 (Permit subpackages as app plugins) 6dbfcebfee72e20f36a434fdc8850930d89acdac'
2025-08-22 00:44:51,277 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2025-08-22 00:44:51,278 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-22 00:44:51,283 [ scc.git] DEBUG omeroweb/settings.py | 9 ++++-----
2025-08-22 00:44:51,283 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 5 deletions(-)
2025-08-22 00:44:51,495 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:51,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:44:51,679 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8c7989c9900270d7cf27523f2649bbb903c7a60'
2025-08-22 00:44:51,688 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:44:51,691 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 628 (Add protocol required since Django4) b8c7989c9900270d7cf27523f2649bbb903c7a60'
2025-08-22 00:44:51,712 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2025-08-22 00:44:51,714 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-22 00:44:51,718 [ scc.git] DEBUG omeroweb/settings.py | 4 ++--
2025-08-22 00:44:51,718 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-)
2025-08-22 00:44:51,930 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:52,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:44:52,119 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-22 00:44:52,162 [ scc.git] DEBUG Get sha1 of %s
2025-08-22 00:44:52,163 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-22 00:44:52,165 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-22 00:44:52,206 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-22 00:44:52,214 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f92e25d7b10> has no local changes
2025-08-22 00:44:52,214 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 535 will-moore 'Initial working browser history' (stage: draft)
Already up to date.
Merged PRs:
- PR 168 stick 'Changes to nginx @maintenance handler'
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 595 sukunis 'linkify supports urls that include {}[] characters'
- PR 596 sukunis 'Linkify can parse anchor tag'
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 613 will-moore 'externalInfo display'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 628 jburel 'Add protocol required since Django4'
Generated by OMERO-python-superbuild-push#498 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/498/)'
2025-08-22 00:44:52,224 [ scc.git] DEBUG [detached HEAD 8bdd3672a] merge master -Dorg -Ssuccess-only
2025-08-22 00:44:52,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-22 00:44:52,224 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-22 00:44:52,274 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2025-08-22 00:44:52,371 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:52,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:44:52,582 [ scc.config] DEBUG Found submodule.omero-marshal.url
2025-08-22 00:44:52,827 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:53,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:44:53,245 [ scc.config] DEBUG Found submodule.omero-py.url
2025-08-22 00:44:53,490 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:53,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:44:53,690 [ scc.config] DEBUG Found submodule.omero-scripts.url
2025-08-22 00:44:53,936 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:54,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:44:54,140 [ scc.config] DEBUG Found submodule.omero-web.url
2025-08-22 00:44:54,385 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-22 00:44:54,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-22 00:44:54,586 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-22 00:44:54,616 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f92e26360d0> has local changes
2025-08-22 00:44:54,616 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
- PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
- PR 450 multimeric 'Add model stubs' (user: multimeric)
- PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 332 jburel 'Build conda'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 472 sbesson 'Remove PyOpenSSL injection via urllib3'
Repository: ome/omero-scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 535 will-moore 'Initial working browser history' (stage: draft)
Already up to date.
Merged PRs:
- PR 168 stick 'Changes to nginx @maintenance handler'
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 595 sukunis 'linkify supports urls that include {}[] characters'
- PR 596 sukunis 'Linkify can parse anchor tag'
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 613 will-moore 'externalInfo display'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 628 jburel 'Add protocol required since Django4'
Generated by OMERO-python-superbuild-push#498 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/498/)'
2025-08-22 00:44:54,624 [ scc.git] DEBUG [detached HEAD 9b61887] merge master -Dorg -Ssuccess-only
2025-08-22 00:44:54,624 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2025-08-22 00:44:54,625 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2025-08-22 00:44:54,625 [ scc.merge] INFO Already up to date.
2025-08-22 00:44:54,625 [ scc.merge] INFO
2025-08-22 00:44:54,625 [ scc.merge] INFO
2025-08-22 00:44:54,625 [ scc.merge] INFO Repository: ome/omero-dropbox
2025-08-22 00:44:54,625 [ scc.merge] INFO Already up to date.
2025-08-22 00:44:54,625 [ scc.merge] INFO
2025-08-22 00:44:54,625 [ scc.merge] INFO Merged PRs:
2025-08-22 00:44:54,625 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2025-08-22 00:44:54,625 [ scc.merge] INFO
2025-08-22 00:44:54,625 [ scc.merge] INFO Repository: ome/omero-marshal
2025-08-22 00:44:54,625 [ scc.merge] INFO Excluded PRs:
2025-08-22 00:44:54,625 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
2025-08-22 00:44:54,625 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2025-08-22 00:44:54,625 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2025-08-22 00:44:54,625 [ scc.merge] INFO Already up to date.
2025-08-22 00:44:54,625 [ scc.merge] INFO
2025-08-22 00:44:54,625 [ scc.merge] INFO Merged PRs:
2025-08-22 00:44:54,625 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2025-08-22 00:44:54,625 [ scc.merge] INFO
2025-08-22 00:44:54,625 [ scc.merge] INFO Repository: ome/omero-py
2025-08-22 00:44:54,625 [ scc.merge] INFO Excluded PRs:
2025-08-22 00:44:54,625 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric)
2025-08-22 00:44:54,625 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
2025-08-22 00:44:54,625 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric)
2025-08-22 00:44:54,625 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude)
2025-08-22 00:44:54,625 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2025-08-22 00:44:54,625 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment)
2025-08-22 00:44:54,625 [ scc.merge] INFO Already up to date.
2025-08-22 00:44:54,626 [ scc.merge] INFO
2025-08-22 00:44:54,626 [ scc.merge] INFO Merged PRs:
2025-08-22 00:44:54,626 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2025-08-22 00:44:54,626 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2025-08-22 00:44:54,626 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2025-08-22 00:44:54,626 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2025-08-22 00:44:54,626 [ scc.merge] INFO - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3'
2025-08-22 00:44:54,626 [ scc.merge] INFO
2025-08-22 00:44:54,626 [ scc.merge] INFO Repository: ome/omero-scripts
2025-08-22 00:44:54,626 [ scc.merge] INFO Excluded PRs:
2025-08-22 00:44:54,626 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2025-08-22 00:44:54,626 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2025-08-22 00:44:54,626 [ scc.merge] INFO Already up to date.
2025-08-22 00:44:54,626 [ scc.merge] INFO
2025-08-22 00:44:54,626 [ scc.merge] INFO Merged PRs:
2025-08-22 00:44:54,626 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-08-22 00:44:54,626 [ scc.merge] INFO
2025-08-22 00:44:54,626 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-22 00:44:54,626 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-08-22 00:44:54,626 [ scc.merge] INFO
2025-08-22 00:44:54,626 [ scc.merge] INFO Repository: ome/omero-web
2025-08-22 00:44:54,626 [ scc.merge] INFO Excluded PRs:
2025-08-22 00:44:54,626 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-08-22 00:44:54,626 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2025-08-22 00:44:54,626 [ scc.merge] INFO Already up to date.
2025-08-22 00:44:54,626 [ scc.merge] INFO
2025-08-22 00:44:54,626 [ scc.merge] INFO Merged PRs:
2025-08-22 00:44:54,626 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler'
2025-08-22 00:44:54,626 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2025-08-22 00:44:54,626 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2025-08-22 00:44:54,626 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters'
2025-08-22 00:44:54,626 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag'
2025-08-22 00:44:54,626 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations'
2025-08-22 00:44:54,626 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf'
2025-08-22 00:44:54,626 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2025-08-22 00:44:54,626 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display'
2025-08-22 00:44:54,626 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins'
2025-08-22 00:44:54,626 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4'
2025-08-22 00:44:54,627 [ scc.merge] INFO
2025-08-22 00:44:54,627 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-08-22 00:44:54,627 [ scc.git] DEBUG Calling 'git remote'
2025-08-22 00:44:54,629 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2025-08-22 00:44:54,629 [ scc.git] DEBUG Calling 'git remote'
2025-08-22 00:44:54,631 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-22 00:44:54,631 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2025-08-22 00:44:54,631 [ scc.git] DEBUG Calling 'git remote'
2025-08-22 00:44:54,633 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-22 00:44:54,633 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2025-08-22 00:44:54,633 [ scc.git] DEBUG Calling 'git remote'
2025-08-22 00:44:54,636 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-22 00:44:54,636 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2025-08-22 00:44:54,636 [ scc.git] DEBUG Calling 'git remote'
2025-08-22 00:44:54,638 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-22 00:44:54,638 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2025-08-22 00:44:54,638 [ scc.git] DEBUG Calling 'git remote'
2025-08-22 00:44:54,640 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from 01fa0c5
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from 6d44f66
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 70b6235a
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 573db34
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 2a7c4d2e3
nothing to commit, working tree clean
HEAD detached from e505e49
nothing to commit, working tree clean
2025-08-22 00:45:25,832 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
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