Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2026-08-23 01:15:49,729 [ scc.config] DEBUG Found github.token
2026-08-23 01:15:49,730 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-08-23 01:15:50,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:15:50,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:15:51,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-08-23 01:15:51,037 [ scc.gh] DEBUG 4999 remaining from 5000 (Reset at 02:08
2026-08-23 01:15:51,037 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-23 01:15:51,049 [ scc.git] DEBUG Check current status
2026-08-23 01:15:51,049 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-23 01:15:51,072 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-08-23 01:15:51,073 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-23 01:15:51,220 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2026-08-23 01:15:51,275 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2026-08-23 01:15:51,345 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5)
2026-08-23 01:15:51,383 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-08-23 01:15:51,412 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2026-08-23 01:15:51,422 [ scc.config] DEBUG Found remote.origin.url
2026-08-23 01:15:51,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2026-08-23 01:15:52,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-23 01:15:52,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-23 01:15:53,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-23 01:15:53,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-23 01:15:53,628 [ scc.git] DEBUG Resetting...
2026-08-23 01:15:53,628 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-08-23 01:15:53,774 [ scc.git] DEBUG HEAD is now at b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-08-23 01:15:53,775 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-08-23 01:15:54,152 [ scc.git] DEBUG Check current status
2026-08-23 01:15:54,152 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-23 01:15:54,175 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-08-23 01:15:54,177 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-23 01:15:54,337 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2026-08-23 01:15:54,379 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2026-08-23 01:15:54,438 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5)
2026-08-23 01:15:54,480 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-08-23 01:15:54,513 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2026-08-23 01:15:54,514 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-08-23 01:15:54,514 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-08-23 01:15:54,514 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-08-23 01:15:54,514 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-08-23 01:15:54,514 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-08-23 01:15:54,514 [ scc.repo] DEBUG ## PRs found:
2026-08-23 01:15:54,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2026-08-23 01:15:55,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None
2026-08-23 01:15:55,353 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-23 01:15:55,353 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-08-23 01:15:55,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None
2026-08-23 01:15:55,863 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-23 01:15:55,864 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-08-23 01:15:56,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None
2026-08-23 01:15:56,539 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-23 01:15:56,539 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-08-23 01:15:57,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None
2026-08-23 01:15:57,045 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-23 01:15:57,046 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-08-23 01:15:57,046 [ scc.repo] DEBUG ## Branches found:
2026-08-23 01:15:57,046 [ scc.git] DEBUG Get sha1 of %s
2026-08-23 01:15:57,046 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:15:57,058 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-23 01:15:57,074 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-23 01:15:57,074 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-23 01:15:57,089 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-23 01:15:57,135 [ scc.git] DEBUG Already up to date.
2026-08-23 01:15:57,135 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head'
2026-08-23 01:15:57,613 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-23 01:15:57,613 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD
2026-08-23 01:15:57,643 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2026-08-23 01:15:58,091 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-23 01:15:58,091 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2026-08-23 01:15:58,118 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head'
2026-08-23 01:15:58,550 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-23 01:15:58,550 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD
2026-08-23 01:15:58,577 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head'
2026-08-23 01:15:59,040 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-23 01:15:59,040 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD
2026-08-23 01:15:59,067 [ scc.git] DEBUG ## Unique users: []
2026-08-23 01:15:59,067 [ scc.git] DEBUG Get sha1 of %s
2026-08-23 01:15:59,067 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:15:59,077 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c'
2026-08-23 01:15:59,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:15:59,103 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c'
2026-08-23 01:15:59,357 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-23 01:15:59,440 [ scc.git] DEBUG omero-marshal | 2 +-
2026-08-23 01:15:59,440 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-08-23 01:15:59,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:15:59,627 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa'
2026-08-23 01:15:59,650 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:15:59,659 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa'
2026-08-23 01:15:59,969 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-23 01:16:00,029 [ scc.git] DEBUG omero-web | 2 +-
2026-08-23 01:16:00,029 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-08-23 01:16:00,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:16:00,239 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf'
2026-08-23 01:16:00,267 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:16:00,277 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf'
2026-08-23 01:16:00,633 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-23 01:16:00,688 [ scc.git] DEBUG omero-dropbox | 2 +-
2026-08-23 01:16:00,688 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-08-23 01:16:00,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:16:00,880 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-08-23 01:16:00,907 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:16:00,916 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-08-23 01:16:01,230 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-23 01:16:01,299 [ scc.git] DEBUG omero-py | 2 +-
2026-08-23 01:16:01,299 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-08-23 01:16:01,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:16:01,494 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-23 01:16:01,882 [ scc.git] DEBUG Submodule path 'omero-dropbox': checked out 'ac93ed4b4a139dd73b414ead55223071fc465de5'
2026-08-23 01:16:02,186 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c'
2026-08-23 01:16:02,804 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1'
2026-08-23 01:16:03,650 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b'
2026-08-23 01:16:03,651 [ scc.git] DEBUG Get sha1 of %s
2026-08-23 01:16:03,651 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:16:03,663 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-23 01:16:04,456 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f57c3b59dd0> has no local changes
2026-08-23 01:16:04,456 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
- PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
- PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
- PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
Generated by OMERO-python-superbuild-push#50 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/50/)'
2026-08-23 01:16:04,919 [ scc.git] DEBUG [detached HEAD bcb082c] merge master -Dorg -Snone
2026-08-23 01:16:04,921 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2026-08-23 01:16:04,921 [ scc.merge] INFO Already up to date.
2026-08-23 01:16:04,921 [ scc.merge] INFO
2026-08-23 01:16:04,921 [ scc.merge] INFO Merged PRs:
2026-08-23 01:16:04,921 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-08-23 01:16:04,921 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-08-23 01:16:04,921 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-08-23 01:16:04,921 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-08-23 01:16:04,921 [ scc.merge] INFO
2026-08-23 01:16:04,921 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-08-23 01:16:04,921 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Submodule path 'omero-marshal': checked out 'f8ff1c2e439f0599d96423b7f64898864548ba9f'
Submodule path 'omero-py': checked out '5d0974d097e25d98892b9b419528edf9256274b0'
Submodule path 'omero-scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0'
Submodule path 'omero-web': checked out '116a77766563756a351f2ec3f6cf98550c7f2cc8'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2026-08-23 01:16:11,460 [ scc.config] DEBUG Found github.token
2026-08-23 01:16:11,462 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-08-23 01:16:11,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:16:12,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:16:12,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-08-23 01:16:12,567 [ scc.gh] DEBUG 4999 remaining from 5000 (Reset at 02:08
2026-08-23 01:16:12,568 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-23 01:16:12,579 [ scc.git] DEBUG Check current status
2026-08-23 01:16:12,580 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-23 01:16:12,602 [ scc.git] DEBUG bcb082c merge master -Dorg -Snone
2026-08-23 01:16:12,603 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-23 01:16:12,764 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4)
2026-08-23 01:16:12,807 [ scc.git] DEBUG +f8ff1c2e439f0599d96423b7f64898864548ba9f omero-marshal (v0.9.1-3-gf8ff1c2)
2026-08-23 01:16:12,875 [ scc.git] DEBUG +5d0974d097e25d98892b9b419528edf9256274b0 omero-py (v5.23.0-6-g5d0974d0)
2026-08-23 01:16:12,917 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 omero-scripts (v5.10.0-1-g5b4d768)
2026-08-23 01:16:12,970 [ scc.git] DEBUG +116a77766563756a351f2ec3f6cf98550c7f2cc8 omero-web (v5.32.0-12-g116a77766)
2026-08-23 01:16:12,981 [ scc.config] DEBUG Found remote.origin.url
2026-08-23 01:16:12,981 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2026-08-23 01:16:12,984 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2026-08-23 01:16:13,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2026-08-23 01:16:13,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-23 01:16:14,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-23 01:16:14,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-23 01:16:15,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-23 01:16:15,240 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-23 01:16:15,369 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-08-23 01:16:15,369 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-23 01:16:15,385 [ scc.git] DEBUG Check current status
2026-08-23 01:16:15,385 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-23 01:16:15,408 [ scc.git] DEBUG ac93ed4 Merge pull request #26 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0
2026-08-23 01:16:15,409 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-23 01:16:15,545 [ scc.config] DEBUG Found remote.origin.url
2026-08-23 01:16:15,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2026-08-23 01:16:16,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-23 01:16:16,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-23 01:16:17,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-23 01:16:17,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-23 01:16:17,706 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-23 01:16:17,834 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-23 01:16:17,834 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-08-23 01:16:17,834 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-23 01:16:17,849 [ scc.git] DEBUG Check current status
2026-08-23 01:16:17,849 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-23 01:16:17,872 [ scc.git] DEBUG f8ff1c2 Merge pull request #90 from sbesson/python_3.9_removal
2026-08-23 01:16:17,872 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-23 01:16:17,989 [ scc.config] DEBUG Found remote.origin.url
2026-08-23 01:16:18,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2026-08-23 01:16:18,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-23 01:16:19,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-23 01:16:19,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-23 01:16:20,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-23 01:16:20,139 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-23 01:16:20,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-23 01:16:20,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-08-23 01:16:20,250 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-23 01:16:20,262 [ scc.git] DEBUG Check current status
2026-08-23 01:16:20,262 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-23 01:16:20,288 [ scc.git] DEBUG 5d0974d0 Merge pull request #498 from sbesson/actions_upgrade
2026-08-23 01:16:20,290 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-23 01:16:20,407 [ scc.config] DEBUG Found remote.origin.url
2026-08-23 01:16:20,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2026-08-23 01:16:21,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-23 01:16:21,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-23 01:16:22,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-23 01:16:22,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-23 01:16:22,651 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-23 01:16:22,754 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-23 01:16:22,755 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-08-23 01:16:22,755 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-23 01:16:22,769 [ scc.git] DEBUG Check current status
2026-08-23 01:16:22,769 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-23 01:16:22,789 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0
2026-08-23 01:16:22,790 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-23 01:16:22,901 [ scc.config] DEBUG Found remote.origin.url
2026-08-23 01:16:22,902 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2026-08-23 01:16:23,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2026-08-23 01:16:23,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-23 01:16:24,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-23 01:16:24,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-23 01:16:25,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-23 01:16:25,021 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-23 01:16:25,131 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-23 01:16:25,131 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-08-23 01:16:25,132 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-23 01:16:25,144 [ scc.git] DEBUG Check current status
2026-08-23 01:16:25,145 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-23 01:16:25,175 [ scc.git] DEBUG 116a77766 Merge pull request #683 from will-moore/post_data_saveImgRDef
2026-08-23 01:16:25,176 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-23 01:16:25,281 [ scc.config] DEBUG Found remote.origin.url
2026-08-23 01:16:25,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2026-08-23 01:16:26,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-23 01:16:26,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-23 01:16:26,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-23 01:16:27,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-23 01:16:27,417 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-23 01:16:27,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-23 01:16:27,523 [ scc.git] DEBUG Resetting...
2026-08-23 01:16:27,523 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-08-23 01:16:27,699 [ scc.git] DEBUG HEAD is now at bcb082c merge master -Dorg -Snone
2026-08-23 01:16:27,700 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-08-23 01:16:28,137 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c'
2026-08-23 01:16:28,613 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1'
2026-08-23 01:16:28,996 [ scc.git] DEBUG Submodule path 'omero-scripts': checked out '03b9116196e1a799dd18a666559613d912be01a5'
2026-08-23 01:16:30,023 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b'
2026-08-23 01:16:30,044 [ scc.git] DEBUG Check current status
2026-08-23 01:16:30,044 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-23 01:16:30,063 [ scc.git] DEBUG bcb082c merge master -Dorg -Snone
2026-08-23 01:16:30,063 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-23 01:16:30,202 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4)
2026-08-23 01:16:30,236 [ scc.git] DEBUG a3dd99b825ad44c9beadc38a8ae8ba94a155f62c omero-marshal (v0.9.0-18-ga3dd99b)
2026-08-23 01:16:30,284 [ scc.git] DEBUG b44120b5235b24db6dde315369ea1519bbeb30c1 omero-py (v5.21.2-3-gb44120b5)
2026-08-23 01:16:30,324 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-08-23 01:16:30,350 [ scc.git] DEBUG 675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b omero-web (v5.29.3-1-g675d57fd7)
2026-08-23 01:16:30,350 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-08-23 01:16:30,350 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-08-23 01:16:30,350 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-08-23 01:16:30,351 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-08-23 01:16:30,351 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-08-23 01:16:30,351 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2026-08-23 01:16:30,351 [ scc.repo] DEBUG ## PRs found:
2026-08-23 01:16:30,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2026-08-23 01:16:31,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None
2026-08-23 01:16:31,173 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-23 01:16:31,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None
2026-08-23 01:16:32,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-23 01:16:32,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None
2026-08-23 01:16:33,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?per_page=1 HTTP/1.1" 200 2
2026-08-23 01:16:33,326 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-08-23 01:16:33,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None
2026-08-23 01:16:33,822 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-23 01:16:34,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None
2026-08-23 01:16:34,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-23 01:16:35,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None
2026-08-23 01:16:35,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/09050892c054f3697fd3604d05ce68b65af6dedf?per_page=1 HTTP/1.1" 200 2
2026-08-23 01:16:35,829 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-08-23 01:16:36,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None
2026-08-23 01:16:36,344 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-23 01:16:37,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None
2026-08-23 01:16:37,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-23 01:16:38,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None
2026-08-23 01:16:38,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/7632acc02b92ba91ed954701ac52de2732a56daa?per_page=1 HTTP/1.1" 200 2
2026-08-23 01:16:38,499 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-08-23 01:16:39,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None
2026-08-23 01:16:39,008 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-23 01:16:39,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None
2026-08-23 01:16:40,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-23 01:16:40,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None
2026-08-23 01:16:41,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/e5077065e3781e634471b4828f120f18c16dad1c?per_page=1 HTTP/1.1" 200 2
2026-08-23 01:16:41,180 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-08-23 01:16:41,180 [ scc.repo] DEBUG ## Branches found:
2026-08-23 01:16:41,180 [ scc.git] DEBUG Get sha1 of %s
2026-08-23 01:16:41,180 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:16:41,191 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-23 01:16:41,207 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-23 01:16:41,207 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-23 01:16:41,233 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-23 01:16:41,289 [ scc.git] DEBUG Already up to date.
2026-08-23 01:16:41,289 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head'
2026-08-23 01:16:41,761 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-23 01:16:41,762 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD
2026-08-23 01:16:41,785 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2026-08-23 01:16:42,229 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-23 01:16:42,229 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2026-08-23 01:16:42,255 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head'
2026-08-23 01:16:42,715 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-23 01:16:42,715 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD
2026-08-23 01:16:42,737 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head'
2026-08-23 01:16:43,197 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-23 01:16:43,197 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD
2026-08-23 01:16:43,224 [ scc.git] DEBUG ## Unique users: []
2026-08-23 01:16:43,224 [ scc.git] DEBUG Get sha1 of %s
2026-08-23 01:16:43,224 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:16:43,235 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c'
2026-08-23 01:16:43,261 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:16:43,269 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c'
2026-08-23 01:16:43,321 [ scc.git] DEBUG Already up to date.
2026-08-23 01:16:43,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:16:43,522 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa'
2026-08-23 01:16:43,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:16:43,561 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa'
2026-08-23 01:16:43,617 [ scc.git] DEBUG Already up to date.
2026-08-23 01:16:43,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:16:43,948 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf'
2026-08-23 01:16:43,981 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:16:43,991 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf'
2026-08-23 01:16:44,042 [ scc.git] DEBUG Already up to date.
2026-08-23 01:16:44,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:16:44,378 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-08-23 01:16:44,400 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:16:44,409 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-08-23 01:16:44,456 [ scc.git] DEBUG Already up to date.
2026-08-23 01:16:44,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:16:44,796 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-23 01:16:45,040 [ scc.git] DEBUG Get sha1 of %s
2026-08-23 01:16:45,041 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:16:45,050 [ scc.repo] DEBUG ## PRs found:
2026-08-23 01:16:45,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 2
2026-08-23 01:16:45,265 [ scc.repo] DEBUG ## Branches found:
2026-08-23 01:16:45,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-08-23 01:16:45,265 [ scc.git] DEBUG Get sha1 of %s
2026-08-23 01:16:45,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:16:45,281 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-23 01:16:45,304 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-23 01:16:45,304 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-23 01:16:45,328 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-23 01:16:45,383 [ scc.git] DEBUG Already up to date.
2026-08-23 01:16:45,384 [ scc.git] DEBUG ## Unique users: []
2026-08-23 01:16:45,384 [ scc.git] DEBUG Get sha1 of %s
2026-08-23 01:16:45,384 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:16:45,400 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-23 01:16:45,509 [ scc.git] DEBUG Get sha1 of %s
2026-08-23 01:16:45,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:16:45,523 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-23 01:16:45,626 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-23 01:16:45,677 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f34cd7af450> has no local changes
2026-08-23 01:16:45,677 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Generated by OMERO-python-superbuild-push#50 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/50/)'
2026-08-23 01:16:45,875 [ scc.git] DEBUG [detached HEAD 414c024] merge master -Dorg -Ssuccess-only
2026-08-23 01:16:45,877 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-23 01:16:45,877 [ scc.repo] DEBUG ## PRs found:
2026-08-23 01:16:46,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2026-08-23 01:16:46,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None
2026-08-23 01:16:47,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None
2026-08-23 01:16:47,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2026-08-23 01:16:48,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2026-08-23 01:16:48,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2026-08-23 01:16:49,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2026-08-23 01:16:49,246 [ scc.repo] DEBUG ## Branches found:
2026-08-23 01:16:49,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-08-23 01:16:49,246 [ scc.git] DEBUG Get sha1 of %s
2026-08-23 01:16:49,246 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:16:49,260 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-23 01:16:49,278 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-23 01:16:49,278 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-23 01:16:49,298 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-23 01:16:49,522 [ scc.git] DEBUG Updating a3dd99b..f8ff1c2
2026-08-23 01:16:50,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/90 HTTP/1.1" 200 None
2026-08-23 01:16:51,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/89 HTTP/1.1" 200 None
2026-08-23 01:16:52,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/69 HTTP/1.1" 200 None
2026-08-23 01:16:52,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/88 HTTP/1.1" 200 None
2026-08-23 01:16:52,931 [ scc.git] DEBUG ## Unique users: []
2026-08-23 01:16:52,931 [ scc.git] DEBUG Get sha1 of %s
2026-08-23 01:16:52,931 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:16:52,950 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-23 01:16:53,059 [ scc.git] DEBUG Get sha1 of %s
2026-08-23 01:16:53,059 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:16:53,071 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-23 01:16:53,165 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-23 01:16:53,271 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f34cd52c990> has no local changes
2026-08-23 01:16:53,271 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Updating a3dd99b..f8ff1c2
Previously merged:
- PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
- PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
- PR 69 will-moore 'Roi encoder allows Shape None'
- PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
Generated by OMERO-python-superbuild-push#50 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/50/)'
2026-08-23 01:16:53,421 [ scc.git] DEBUG [detached HEAD 8be12e2] merge master -Dorg -Ssuccess-only
2026-08-23 01:16:53,423 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-23 01:16:53,423 [ scc.repo] DEBUG ## PRs found:
2026-08-23 01:16:53,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2026-08-23 01:16:54,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/489 HTTP/1.1" 200 None
2026-08-23 01:16:54,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/489/comments HTTP/1.1" 200 None
2026-08-23 01:16:55,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/80cdacd6835aa00f8fa81f9f18212b072f6e1884?page=1 HTTP/1.1" 200 None
2026-08-23 01:16:55,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/80cdacd6835aa00f8fa81f9f18212b072f6e1884/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-23 01:16:56,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/80cdacd6835aa00f8fa81f9f18212b072f6e1884/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-23 01:16:56,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/80cdacd6835aa00f8fa81f9f18212b072f6e1884?page=1 HTTP/1.1" 200 None
2026-08-23 01:16:57,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/80cdacd6835aa00f8fa81f9f18212b072f6e1884?per_page=1 HTTP/1.1" 200 None
2026-08-23 01:16:57,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/80cdacd6835aa00f8fa81f9f18212b072f6e1884?page=1 HTTP/1.1" 200 None
2026-08-23 01:16:58,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/80cdacd6835aa00f8fa81f9f18212b072f6e1884/status HTTP/1.1" 200 None
2026-08-23 01:16:58,322 [ scc.repo] DEBUG - PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
2026-08-23 01:16:58,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None
2026-08-23 01:16:59,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None
2026-08-23 01:16:59,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None
2026-08-23 01:17:00,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459/comments HTTP/1.1" 200 None
2026-08-23 01:17:00,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2026-08-23 01:17:01,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None
2026-08-23 01:17:02,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:02,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-23 01:17:03,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:03,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2
2026-08-23 01:17:03,591 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2026-08-23 01:17:03,592 [ scc.repo] DEBUG ## Branches found:
2026-08-23 01:17:03,592 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-08-23 01:17:03,593 [ scc.git] DEBUG Get sha1 of %s
2026-08-23 01:17:03,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:17:03,609 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-23 01:17:03,635 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-23 01:17:03,635 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-23 01:17:03,699 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-23 01:17:04,268 [ scc.git] DEBUG Updating b44120b5..5d0974d0
2026-08-23 01:17:04,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/498 HTTP/1.1" 200 None
2026-08-23 01:17:05,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/495 HTTP/1.1" 200 None
2026-08-23 01:17:06,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/496 HTTP/1.1" 200 None
2026-08-23 01:17:07,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/199 HTTP/1.1" 200 None
2026-08-23 01:17:08,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/492 HTTP/1.1" 200 None
2026-08-23 01:17:08,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/493 HTTP/1.1" 200 None
2026-08-23 01:17:09,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/491 HTTP/1.1" 200 None
2026-08-23 01:17:10,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/490 HTTP/1.1" 200 None
2026-08-23 01:17:11,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/483 HTTP/1.1" 200 None
2026-08-23 01:17:11,429 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2026-08-23 01:17:12,058 [ scc.git] DEBUG From https://github.com/ome/omero-py
2026-08-23 01:17:12,058 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2026-08-23 01:17:12,104 [ scc.git] DEBUG Calling 'git fetch origin pull/489/head'
2026-08-23 01:17:12,580 [ scc.git] DEBUG From https://github.com/ome/omero-py
2026-08-23 01:17:12,580 [ scc.git] DEBUG * branch refs/pull/489/head -> FETCH_HEAD
2026-08-23 01:17:12,606 [ scc.git] DEBUG ## Unique users: []
2026-08-23 01:17:12,606 [ scc.git] DEBUG Get sha1 of %s
2026-08-23 01:17:12,606 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:17:12,620 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2026-08-23 01:17:12,684 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:17:12,699 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2026-08-23 01:17:13,012 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2026-08-23 01:17:13,090 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-23 01:17:13,184 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2026-08-23 01:17:13,184 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2026-08-23 01:17:13,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:17:13,401 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...80cdacd6835aa00f8fa81f9f18212b072f6e1884'
2026-08-23 01:17:13,463 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:17:13,479 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 489 (Add more opts support for getObjects('Annotation')) 80cdacd6835aa00f8fa81f9f18212b072f6e1884'
2026-08-23 01:17:13,776 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2026-08-23 01:17:13,852 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-23 01:17:13,947 [ scc.git] DEBUG src/omero/gateway/__init__.py | 290 ++++++++++++++++--------------------------
2026-08-23 01:17:13,947 [ scc.git] DEBUG 1 file changed, 109 insertions(+), 181 deletions(-)
2026-08-23 01:17:14,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:17:14,123 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-23 01:17:14,262 [ scc.git] DEBUG Get sha1 of %s
2026-08-23 01:17:14,262 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:17:14,282 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-23 01:17:14,400 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-23 01:17:14,521 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f34cd81c4d0> has no local changes
2026-08-23 01:17:14,521 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
- PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
Updating b44120b5..5d0974d0
Previously merged:
- PR 498 sbesson 'Upgrade GitHub actions'
- PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
- PR 496 will-moore 'Fix ice-3.6 download link in README'
- PR 199 joshmoore 'user: allow setting default group'
- PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
- PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
- PR 491 kkoz 'First pass at better cleanse dry-run output'
- PR 490 sbesson 'Remove support from Python 3.9'
- PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
Merged PRs:
- PR 391 joshmoore 'Add jstack command'
- PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
Generated by OMERO-python-superbuild-push#50 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/50/)'
2026-08-23 01:17:14,720 [ scc.git] DEBUG [detached HEAD 69e3baf7] merge master -Dorg -Ssuccess-only
2026-08-23 01:17:14,723 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-23 01:17:14,723 [ scc.git] INFO Overriding base-branch from master to develop
2026-08-23 01:17:14,723 [ scc.repo] DEBUG ## PRs found:
2026-08-23 01:17:15,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2026-08-23 01:17:15,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/232 HTTP/1.1" 200 None
2026-08-23 01:17:16,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:16,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-23 01:17:17,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-23 01:17:17,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:18,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/e190baa635f40826befc84321719243092ee849f?per_page=1 HTTP/1.1" 200 2
2026-08-23 01:17:18,125 [ scc.repo] DEBUG - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
2026-08-23 01:17:18,125 [ scc.repo] DEBUG ## Branches found:
2026-08-23 01:17:18,125 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-08-23 01:17:18,126 [ scc.git] DEBUG Get sha1 of %s
2026-08-23 01:17:18,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:17:18,147 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2026-08-23 01:17:18,166 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-23 01:17:18,166 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2026-08-23 01:17:18,189 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2026-08-23 01:17:18,478 [ scc.git] DEBUG Updating 03b9116..5b4d768
2026-08-23 01:17:19,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None
2026-08-23 01:17:19,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None
2026-08-23 01:17:20,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None
2026-08-23 01:17:21,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None
2026-08-23 01:17:21,657 [ scc.git] DEBUG Calling 'git fetch origin pull/232/head'
2026-08-23 01:17:22,304 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2026-08-23 01:17:22,304 [ scc.git] DEBUG * branch refs/pull/232/head -> FETCH_HEAD
2026-08-23 01:17:22,333 [ scc.git] DEBUG ## Unique users: []
2026-08-23 01:17:22,333 [ scc.git] DEBUG Get sha1 of %s
2026-08-23 01:17:22,333 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:17:22,349 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e190baa635f40826befc84321719243092ee849f'
2026-08-23 01:17:22,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:17:22,397 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 232 (Add Auto header detection to `Populate_Metadata.py`) e190baa635f40826befc84321719243092ee849f'
2026-08-23 01:17:22,624 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-23 01:17:22,696 [ scc.git] DEBUG omero/import_scripts/Populate_Metadata.py | 26 ++++++++++++++++++++++++--
2026-08-23 01:17:22,696 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-)
2026-08-23 01:17:22,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:17:22,880 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-23 01:17:23,012 [ scc.git] DEBUG Get sha1 of %s
2026-08-23 01:17:23,012 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:17:23,027 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-23 01:17:23,130 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-23 01:17:23,212 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f34cd515b90> has no local changes
2026-08-23 01:17:23,212 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Updating 03b9116..5b4d768
Previously merged:
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
Merged PRs:
- PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
Generated by OMERO-python-superbuild-push#50 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/50/)'
2026-08-23 01:17:23,417 [ scc.git] DEBUG [detached HEAD ab00c9b] merge master -Dorg -Ssuccess-only
2026-08-23 01:17:23,419 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-23 01:17:23,419 [ scc.repo] DEBUG ## PRs found:
2026-08-23 01:17:23,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2026-08-23 01:17:24,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/685 HTTP/1.1" 200 None
2026-08-23 01:17:24,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:25,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-23 01:17:25,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-23 01:17:26,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:26,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/72461e7c571d3d45c668c1827baaa562eb007630?per_page=1 HTTP/1.1" 200 None
2026-08-23 01:17:27,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:27,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630/status HTTP/1.1" 200 None
2026-08-23 01:17:27,852 [ scc.repo] DEBUG - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
2026-08-23 01:17:28,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684 HTTP/1.1" 200 None
2026-08-23 01:17:28,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684/comments HTTP/1.1" 200 None
2026-08-23 01:17:28,849 [ scc.repo] DEBUG # ... Include label: include
2026-08-23 01:17:29,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:30,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-23 01:17:30,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-23 01:17:31,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:31,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?per_page=1 HTTP/1.1" 200 None
2026-08-23 01:17:32,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:32,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/status HTTP/1.1" 200 None
2026-08-23 01:17:32,548 [ scc.repo] DEBUG - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
2026-08-23 01:17:33,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682 HTTP/1.1" 200 None
2026-08-23 01:17:33,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682/comments HTTP/1.1" 200 None
2026-08-23 01:17:34,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/54286f44fb13954e8e6d0f0dc3c069d4776756bf?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:34,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/54286f44fb13954e8e6d0f0dc3c069d4776756bf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-23 01:17:35,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/54286f44fb13954e8e6d0f0dc3c069d4776756bf/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-23 01:17:35,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/54286f44fb13954e8e6d0f0dc3c069d4776756bf?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:36,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/54286f44fb13954e8e6d0f0dc3c069d4776756bf?per_page=1 HTTP/1.1" 200 None
2026-08-23 01:17:36,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/54286f44fb13954e8e6d0f0dc3c069d4776756bf?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:37,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/54286f44fb13954e8e6d0f0dc3c069d4776756bf/status HTTP/1.1" 200 None
2026-08-23 01:17:37,326 [ scc.repo] DEBUG - PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
2026-08-23 01:17:37,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/677 HTTP/1.1" 200 None
2026-08-23 01:17:38,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/677/comments HTTP/1.1" 200 None
2026-08-23 01:17:38,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:39,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-23 01:17:39,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-23 01:17:40,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:40,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?per_page=1 HTTP/1.1" 200 None
2026-08-23 01:17:41,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:41,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/status HTTP/1.1" 200 None
2026-08-23 01:17:41,772 [ scc.repo] DEBUG - PR 677 will-moore 'Add table_histogram endpoint'
2026-08-23 01:17:42,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/644 HTTP/1.1" 200 None
2026-08-23 01:17:42,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/644/comments HTTP/1.1" 200 None
2026-08-23 01:17:43,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:43,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-23 01:17:44,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-23 01:17:44,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:45,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?per_page=1 HTTP/1.1" 200 None
2026-08-23 01:17:45,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:46,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/status HTTP/1.1" 200 None
2026-08-23 01:17:46,206 [ scc.repo] DEBUG - PR 644 jo-mueller 'Add some install instructions for windows'
2026-08-23 01:17:46,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643 HTTP/1.1" 200 None
2026-08-23 01:17:47,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643/comments HTTP/1.1" 200 None
2026-08-23 01:17:47,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:48,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-23 01:17:48,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-23 01:17:49,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:49,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1122646161dfcf0118e5940417b3c04a9568f93e?per_page=1 HTTP/1.1" 200 None
2026-08-23 01:17:50,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:50,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/status HTTP/1.1" 200 None
2026-08-23 01:17:50,600 [ scc.repo] DEBUG - PR 643 will-moore 'Don't disable the histogram for big images'
2026-08-23 01:17:51,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638 HTTP/1.1" 200 None
2026-08-23 01:17:51,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638/comments HTTP/1.1" 200 None
2026-08-23 01:17:52,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None
2026-08-23 01:17:52,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None
2026-08-23 01:17:53,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:53,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-23 01:17:54,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-23 01:17:54,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:55,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None
2026-08-23 01:17:55,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:56,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None
2026-08-23 01:17:56,403 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf'
2026-08-23 01:17:56,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None
2026-08-23 01:17:57,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602/comments HTTP/1.1" 200 None
2026-08-23 01:17:57,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:58,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-23 01:17:58,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539?page=1 HTTP/1.1" 200 None
2026-08-23 01:17:59,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 2
2026-08-23 01:17:59,413 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations'
2026-08-23 01:17:59,413 [ scc.repo] DEBUG ## Branches found:
2026-08-23 01:17:59,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-08-23 01:17:59,414 [ scc.git] DEBUG Get sha1 of %s
2026-08-23 01:17:59,414 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:17:59,437 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-23 01:17:59,456 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-23 01:17:59,456 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-23 01:17:59,505 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-23 01:18:00,719 [ scc.git] DEBUG Updating 675d57fd7..116a77766
2026-08-23 01:18:01,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/683 HTTP/1.1" 200 None
2026-08-23 01:18:02,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/681 HTTP/1.1" 200 None
2026-08-23 01:18:02,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/679 HTTP/1.1" 200 None
2026-08-23 01:18:03,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/676 HTTP/1.1" 200 None
2026-08-23 01:18:04,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/675 HTTP/1.1" 200 None
2026-08-23 01:18:05,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/613 HTTP/1.1" 200 None
2026-08-23 01:18:06,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/670 HTTP/1.1" 200 None
2026-08-23 01:18:06,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/667 HTTP/1.1" 200 None
2026-08-23 01:18:07,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/666 HTTP/1.1" 200 None
2026-08-23 01:18:08,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/655 HTTP/1.1" 200 None
2026-08-23 01:18:09,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/665 HTTP/1.1" 200 None
2026-08-23 01:18:10,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/664 HTTP/1.1" 200 None
2026-08-23 01:18:10,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/658 HTTP/1.1" 200 None
2026-08-23 01:18:11,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/656 HTTP/1.1" 200 None
2026-08-23 01:18:12,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/653 HTTP/1.1" 200 None
2026-08-23 01:18:13,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/646 HTTP/1.1" 200 None
2026-08-23 01:18:14,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/639 HTTP/1.1" 200 None
2026-08-23 01:18:14,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/662 HTTP/1.1" 200 None
2026-08-23 01:18:15,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/651 HTTP/1.1" 200 None
2026-08-23 01:18:16,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/650 HTTP/1.1" 200 None
2026-08-23 01:18:17,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/649 HTTP/1.1" 200 None
2026-08-23 01:18:18,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/648 HTTP/1.1" 200 None
2026-08-23 01:18:18,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/647 HTTP/1.1" 200 None
2026-08-23 01:18:19,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/645 HTTP/1.1" 200 None
2026-08-23 01:18:20,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/637 HTTP/1.1" 200 None
2026-08-23 01:18:21,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/629 HTTP/1.1" 200 None
2026-08-23 01:18:21,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/628 HTTP/1.1" 200 None
2026-08-23 01:18:22,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/619 HTTP/1.1" 200 None
2026-08-23 01:18:23,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/612 HTTP/1.1" 200 None
2026-08-23 01:18:24,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/534 HTTP/1.1" 200 None
2026-08-23 01:18:24,154 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head'
2026-08-23 01:18:24,679 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-23 01:18:24,679 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD
2026-08-23 01:18:24,704 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head'
2026-08-23 01:18:25,373 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-23 01:18:25,373 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD
2026-08-23 01:18:25,400 [ scc.git] DEBUG Calling 'git fetch origin pull/643/head'
2026-08-23 01:18:26,052 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-23 01:18:26,052 [ scc.git] DEBUG * branch refs/pull/643/head -> FETCH_HEAD
2026-08-23 01:18:26,078 [ scc.git] DEBUG Calling 'git fetch origin pull/644/head'
2026-08-23 01:18:26,638 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-23 01:18:26,638 [ scc.git] DEBUG * branch refs/pull/644/head -> FETCH_HEAD
2026-08-23 01:18:26,663 [ scc.git] DEBUG Calling 'git fetch origin pull/677/head'
2026-08-23 01:18:27,234 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-23 01:18:27,234 [ scc.git] DEBUG * branch refs/pull/677/head -> FETCH_HEAD
2026-08-23 01:18:27,256 [ scc.git] DEBUG Calling 'git fetch origin pull/682/head'
2026-08-23 01:18:28,066 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-23 01:18:28,066 [ scc.git] DEBUG * branch refs/pull/682/head -> FETCH_HEAD
2026-08-23 01:18:28,091 [ scc.git] DEBUG Calling 'git fetch origin pull/684/head'
2026-08-23 01:18:28,706 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-23 01:18:28,706 [ scc.git] DEBUG * branch refs/pull/684/head -> FETCH_HEAD
2026-08-23 01:18:28,731 [ scc.git] DEBUG Calling 'git fetch origin pull/685/head'
2026-08-23 01:18:29,332 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-23 01:18:29,332 [ scc.git] DEBUG * branch refs/pull/685/head -> FETCH_HEAD
2026-08-23 01:18:29,365 [ scc.git] DEBUG ## Unique users: []
2026-08-23 01:18:29,365 [ scc.git] DEBUG Get sha1 of %s
2026-08-23 01:18:29,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:18:29,380 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539'
2026-08-23 01:18:29,428 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:18:29,444 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539'
2026-08-23 01:18:30,070 [ scc.git] DEBUG Auto-merging omeroweb/webclient/static/webclient/css/dusty.css
2026-08-23 01:18:30,206 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-23 01:18:30,313 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 -
2026-08-23 01:18:30,313 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++--
2026-08-23 01:18:30,313 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++-
2026-08-23 01:18:30,313 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +-
2026-08-23 01:18:30,313 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++-
2026-08-23 01:18:30,313 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++--
2026-08-23 01:18:30,313 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++--
2026-08-23 01:18:30,313 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++-----
2026-08-23 01:18:30,313 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 +
2026-08-23 01:18:30,313 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +-
2026-08-23 01:18:30,313 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++--
2026-08-23 01:18:30,313 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-)
2026-08-23 01:18:30,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:18:30,493 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2026-08-23 01:18:30,556 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:18:30,572 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2026-08-23 01:18:31,060 [ scc.git] DEBUG Auto-merging omeroweb/webclient/controller/container.py
2026-08-23 01:18:31,060 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2026-08-23 01:18:31,153 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-23 01:18:31,254 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------
2026-08-23 01:18:31,255 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +---
2026-08-23 01:18:31,255 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 -----------------
2026-08-23 01:18:31,255 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-)
2026-08-23 01:18:31,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:18:31,446 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122646161dfcf0118e5940417b3c04a9568f93e'
2026-08-23 01:18:31,519 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:18:31,533 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 643 (Don't disable the histogram for big images) 1122646161dfcf0118e5940417b3c04a9568f93e'
2026-08-23 01:18:31,907 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2026-08-23 01:18:32,017 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-23 01:18:32,118 [ scc.git] DEBUG .../templates/webclient/annotations/metadata_preview.html | 8 ++++----
2026-08-23 01:18:32,118 [ scc.git] DEBUG omeroweb/webgateway/static/webgateway/js/ome.histogram.js | 4 ++++
2026-08-23 01:18:32,118 [ scc.git] DEBUG omeroweb/webgateway/views.py | 4 +---
2026-08-23 01:18:32,118 [ scc.git] DEBUG 3 files changed, 9 insertions(+), 7 deletions(-)
2026-08-23 01:18:32,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:18:32,302 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1beaa97e6086aaf1e1f8e6147f93dcef722be4f3'
2026-08-23 01:18:32,374 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:18:32,390 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 644 (Add some install instructions for windows) 1beaa97e6086aaf1e1f8e6147f93dcef722be4f3'
2026-08-23 01:18:32,648 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-23 01:18:32,709 [ scc.git] DEBUG README.rst | 50 ++++++++++++++++++++++++++++++++++++++++++++------
2026-08-23 01:18:32,709 [ scc.git] DEBUG 1 file changed, 44 insertions(+), 6 deletions(-)
2026-08-23 01:18:32,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:18:32,889 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7'
2026-08-23 01:18:32,955 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:18:32,968 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 677 (Add table_histogram endpoint) 1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7'
2026-08-23 01:18:33,268 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2026-08-23 01:18:33,394 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-23 01:18:33,497 [ scc.git] DEBUG omeroweb/webgateway/urls.py | 11 +++++
2026-08-23 01:18:33,497 [ scc.git] DEBUG omeroweb/webgateway/views.py | 108 +++++++++++++++++++++++++++++++++++++++----
2026-08-23 01:18:33,497 [ scc.git] DEBUG 2 files changed, 109 insertions(+), 10 deletions(-)
2026-08-23 01:18:33,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:18:33,682 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...54286f44fb13954e8e6d0f0dc3c069d4776756bf'
2026-08-23 01:18:33,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:18:33,781 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 682 (Initial support for JSON api /annotations endpoint) 54286f44fb13954e8e6d0f0dc3c069d4776756bf'
2026-08-23 01:18:34,131 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-23 01:18:34,233 [ scc.git] DEBUG omeroweb/api/urls.py | 22 +++++++++++
2026-08-23 01:18:34,233 [ scc.git] DEBUG omeroweb/api/views.py | 100 +++++++++++++++++++++++++++++++++++++++++++++++++-
2026-08-23 01:18:34,233 [ scc.git] DEBUG 2 files changed, 121 insertions(+), 1 deletion(-)
2026-08-23 01:18:34,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:18:34,430 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8dbf1c22784a7faaa1db2ff9d5150edbc823e575'
2026-08-23 01:18:34,526 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:18:34,549 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 684 (add config "omero.web.annotation_order") 8dbf1c22784a7faaa1db2ff9d5150edbc823e575'
2026-08-23 01:18:34,922 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-23 01:18:35,001 [ scc.git] DEBUG omeroweb/settings.py | 21 +++++++++++++++++++++
2026-08-23 01:18:35,001 [ scc.git] DEBUG omeroweb/webclient/tree.py | 27 ++++++++++++++++++++++++++-
2026-08-23 01:18:35,001 [ scc.git] DEBUG 2 files changed, 47 insertions(+), 1 deletion(-)
2026-08-23 01:18:35,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:18:35,193 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...72461e7c571d3d45c668c1827baaa562eb007630'
2026-08-23 01:18:35,286 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:18:35,298 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 685 (Prepare chgrp 'update' response before chgrp submission) 72461e7c571d3d45c668c1827baaa562eb007630'
2026-08-23 01:18:35,549 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2026-08-23 01:18:35,650 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-23 01:18:35,729 [ scc.git] DEBUG omeroweb/webclient/views.py | 80 +++++++++++++++++++++++----------------------
2026-08-23 01:18:35,729 [ scc.git] DEBUG 1 file changed, 41 insertions(+), 39 deletions(-)
2026-08-23 01:18:35,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:18:35,923 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-23 01:18:36,038 [ scc.git] DEBUG Get sha1 of %s
2026-08-23 01:18:36,038 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-23 01:18:36,054 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-23 01:18:36,165 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-23 01:18:36,320 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f34cd6e17d0> has no local changes
2026-08-23 01:18:36,320 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
Updating 675d57fd7..116a77766
Previously merged:
- PR 683 will-moore 'Post data save imgRdef'
- PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
- PR 679 knabar 'Allow POST requests from public user for specific URLs'
- PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
- PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 613 will-moore 'externalInfo display'
- PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
- PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
- PR 655 will-moore 'Handle invalid group id in switch_active_group'
- PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
- PR 664 knabar 'Pin django-pipeline to a recent version'
- PR 658 will-moore 'Description scrollable if taller than 350px'
- PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
- PR 646 knabar 'Force Django 5.2 in next release'
- PR 639 Rdornier 'Split view user label'
- PR 662 jburel 'Add gunicorn doc links'
- PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
- PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
- PR 648 will-moore 'hide scrollbar for top-links'
- PR 647 jburel 'Replace manual changelog by automated GH release step'
- PR 645 knabar 'Update changelog for 5.30.0 release'
- PR 637 knabar 'Upgrade to Django 5.2 '
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 628 jburel 'Add protocol required since Django4'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Merged PRs:
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 643 will-moore 'Don't disable the histogram for big images'
- PR 644 jo-mueller 'Add some install instructions for windows'
- PR 677 will-moore 'Add table_histogram endpoint'
- PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
- PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
- PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
Generated by OMERO-python-superbuild-push#50 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/50/)'
2026-08-23 01:18:36,529 [ scc.git] DEBUG [detached HEAD 3958623e5] merge master -Dorg -Ssuccess-only
2026-08-23 01:18:36,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-23 01:18:36,531 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-23 01:18:36,675 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2026-08-23 01:18:36,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:18:36,904 [ scc.config] DEBUG Found submodule.omero-marshal.url
2026-08-23 01:18:37,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:18:37,331 [ scc.config] DEBUG Found submodule.omero-py.url
2026-08-23 01:18:37,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:18:37,770 [ scc.config] DEBUG Found submodule.omero-scripts.url
2026-08-23 01:18:38,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:18:38,225 [ scc.config] DEBUG Found submodule.omero-web.url
2026-08-23 01:18:38,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-23 01:18:38,683 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-23 01:18:39,486 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f34ce2a33d0> has local changes
2026-08-23 01:18:39,486 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
- PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
- PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
- PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
Repository: ome/omero-dropbox
Already up to date.
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Updating a3dd99b..f8ff1c2
Previously merged:
- PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
- PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
- PR 69 will-moore 'Roi encoder allows Shape None'
- PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
- PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
Updating b44120b5..5d0974d0
Previously merged:
- PR 498 sbesson 'Upgrade GitHub actions'
- PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
- PR 496 will-moore 'Fix ice-3.6 download link in README'
- PR 199 joshmoore 'user: allow setting default group'
- PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
- PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
- PR 491 kkoz 'First pass at better cleanse dry-run output'
- PR 490 sbesson 'Remove support from Python 3.9'
- PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
Merged PRs:
- PR 391 joshmoore 'Add jstack command'
- PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
Repository: ome/omero-scripts
Updating 03b9116..5b4d768
Previously merged:
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
Merged PRs:
- PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
Repository: ome/omero-web
Excluded PRs:
- PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
Updating 675d57fd7..116a77766
Previously merged:
- PR 683 will-moore 'Post data save imgRdef'
- PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
- PR 679 knabar 'Allow POST requests from public user for specific URLs'
- PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
- PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 613 will-moore 'externalInfo display'
- PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
- PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
- PR 655 will-moore 'Handle invalid group id in switch_active_group'
- PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
- PR 664 knabar 'Pin django-pipeline to a recent version'
- PR 658 will-moore 'Description scrollable if taller than 350px'
- PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
- PR 646 knabar 'Force Django 5.2 in next release'
- PR 639 Rdornier 'Split view user label'
- PR 662 jburel 'Add gunicorn doc links'
- PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
- PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
- PR 648 will-moore 'hide scrollbar for top-links'
- PR 647 jburel 'Replace manual changelog by automated GH release step'
- PR 645 knabar 'Update changelog for 5.30.0 release'
- PR 637 knabar 'Upgrade to Django 5.2 '
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 628 jburel 'Add protocol required since Django4'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Merged PRs:
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 643 will-moore 'Don't disable the histogram for big images'
- PR 644 jo-mueller 'Add some install instructions for windows'
- PR 677 will-moore 'Add table_histogram endpoint'
- PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
- PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
- PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
Generated by OMERO-python-superbuild-push#50 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/50/)'
2026-08-23 01:18:39,827 [ scc.git] DEBUG [detached HEAD 69320b8] merge master -Dorg -Ssuccess-only
2026-08-23 01:18:39,828 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2026-08-23 01:18:39,829 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2026-08-23 01:18:39,829 [ scc.merge] INFO Already up to date.
2026-08-23 01:18:39,829 [ scc.merge] INFO
2026-08-23 01:18:39,829 [ scc.merge] INFO Merged PRs:
2026-08-23 01:18:39,829 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-08-23 01:18:39,829 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-08-23 01:18:39,829 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-08-23 01:18:39,829 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-08-23 01:18:39,830 [ scc.merge] INFO
2026-08-23 01:18:39,830 [ scc.merge] INFO Repository: ome/omero-dropbox
2026-08-23 01:18:39,830 [ scc.merge] INFO Already up to date.
2026-08-23 01:18:39,830 [ scc.merge] INFO
2026-08-23 01:18:39,830 [ scc.merge] INFO
2026-08-23 01:18:39,830 [ scc.merge] INFO Repository: ome/omero-marshal
2026-08-23 01:18:39,830 [ scc.merge] INFO Excluded PRs:
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2026-08-23 01:18:39,830 [ scc.merge] INFO Updating a3dd99b..f8ff1c2
2026-08-23 01:18:39,830 [ scc.merge] INFO Previously merged:
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
2026-08-23 01:18:39,830 [ scc.merge] INFO
2026-08-23 01:18:39,830 [ scc.merge] INFO
2026-08-23 01:18:39,830 [ scc.merge] INFO Repository: ome/omero-py
2026-08-23 01:18:39,830 [ scc.merge] INFO Excluded PRs:
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric)
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
2026-08-23 01:18:39,830 [ scc.merge] INFO Updating b44120b5..5d0974d0
2026-08-23 01:18:39,830 [ scc.merge] INFO Previously merged:
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 498 sbesson 'Upgrade GitHub actions'
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 496 will-moore 'Fix ice-3.6 download link in README'
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 491 kkoz 'First pass at better cleanse dry-run output'
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 490 sbesson 'Remove support from Python 3.9'
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
2026-08-23 01:18:39,830 [ scc.merge] INFO
2026-08-23 01:18:39,830 [ scc.merge] INFO Merged PRs:
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
2026-08-23 01:18:39,830 [ scc.merge] INFO
2026-08-23 01:18:39,830 [ scc.merge] INFO Repository: ome/omero-scripts
2026-08-23 01:18:39,830 [ scc.merge] INFO Updating 03b9116..5b4d768
2026-08-23 01:18:39,830 [ scc.merge] INFO Previously merged:
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 231 jburel 'Create Release '
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label'
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix'
2026-08-23 01:18:39,830 [ scc.merge] INFO
2026-08-23 01:18:39,830 [ scc.merge] INFO Merged PRs:
2026-08-23 01:18:39,830 [ scc.merge] INFO - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
2026-08-23 01:18:39,830 [ scc.merge] INFO
2026-08-23 01:18:39,831 [ scc.merge] INFO Repository: ome/omero-web
2026-08-23 01:18:39,831 [ scc.merge] INFO Excluded PRs:
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
2026-08-23 01:18:39,831 [ scc.merge] INFO Updating 675d57fd7..116a77766
2026-08-23 01:18:39,831 [ scc.merge] INFO Previously merged:
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 683 will-moore 'Post data save imgRdef'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 679 knabar 'Allow POST requests from public user for specific URLs'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 655 will-moore 'Handle invalid group id in switch_active_group'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 664 knabar 'Pin django-pipeline to a recent version'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 658 will-moore 'Description scrollable if taller than 350px'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 646 knabar 'Force Django 5.2 in next release'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 639 Rdornier 'Split view user label'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 662 jburel 'Add gunicorn doc links'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 648 will-moore 'hide scrollbar for top-links'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 647 jburel 'Replace manual changelog by automated GH release step'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 645 knabar 'Update changelog for 5.30.0 release'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 637 knabar 'Upgrade to Django 5.2 '
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2026-08-23 01:18:39,831 [ scc.merge] INFO
2026-08-23 01:18:39,831 [ scc.merge] INFO Merged PRs:
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 643 will-moore 'Don't disable the histogram for big images'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 644 jo-mueller 'Add some install instructions for windows'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 677 will-moore 'Add table_histogram endpoint'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
2026-08-23 01:18:39,831 [ scc.merge] INFO - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
2026-08-23 01:18:39,831 [ scc.merge] INFO
2026-08-23 01:18:39,831 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-08-23 01:18:39,831 [ scc.git] DEBUG Calling 'git remote'
2026-08-23 01:18:39,847 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-08-23 01:18:39,847 [ scc.git] DEBUG Calling 'git remote'
2026-08-23 01:18:39,871 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-23 01:18:39,871 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-08-23 01:18:39,871 [ scc.git] DEBUG Calling 'git remote'
2026-08-23 01:18:39,887 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-23 01:18:39,887 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-08-23 01:18:39,887 [ scc.git] DEBUG Calling 'git remote'
2026-08-23 01:18:39,904 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-23 01:18:39,904 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-08-23 01:18:39,904 [ scc.git] DEBUG Calling 'git remote'
2026-08-23 01:18:39,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-23 01:18:39,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-08-23 01:18:39,920 [ scc.git] DEBUG Calling 'git remote'
2026-08-23 01:18:39,935 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
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grep: build.gradle: No such file or directory
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Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from ac93ed4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from a3dd99b
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from b44120b5
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 03b9116
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 675d57fd7
nothing to commit, working tree clean
HEAD detached from b68c3cf
nothing to commit, working tree clean
2026-08-23 01:19:19,199 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
