![[Jenkins]](/jenkins/static/9bac06d9/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 603 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision e505e4936e5c9bb70e5ff78e9177f491ec55c92d (refs/remotes/origin/master) Commit message: "Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f e505e4936e5c9bb70e5ff78e9177f491ec55c92d # timeout=10 > git rev-list --no-walk e505e4936e5c9bb70e5ff78e9177f491ec55c92d # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 535 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.2 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.7.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.15-py3-none-any.whl.metadata (25 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-45.0.6-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.14 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting pycparser (from cffi>=1.14->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.8.3-py3-none-any.whl.metadata (2.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.7.0-py3-none-any.whl (416 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-45.0.6-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.8.3-py3-none-any.whl (161 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Using cached ruamel.yaml-0.18.15-py3-none-any.whl (119 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.7.0 PyYAML-6.0.2 certifi-2025.8.3 cffi-1.17.1 charset_normalizer-3.4.3 cryptography-45.0.6 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.5 ruamel.yaml-0.18.15 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-08-31 00:33:35,810 [ scc.config] DEBUG Found github.token 2025-08-31 00:33:35,811 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:36,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:33:36,283 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:36,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:33:36,746 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:36,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-08-31 00:33:36,951 [ scc.gh] DEBUG 4376 remaining from 5000 (Reset at 00:08 2025-08-31 00:33:36,952 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:33:36,954 [ scc.git] DEBUG Check current status 2025-08-31 00:33:36,954 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:33:36,957 [ scc.git] DEBUG e505e49 Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235 2025-08-31 00:33:36,957 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:33:37,002 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-08-31 00:33:37,005 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-08-31 00:33:37,010 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-08-31 00:33:37,015 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34) 2025-08-31 00:33:37,020 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-08-31 00:33:37,023 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:33:37,203 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:37,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-08-31 00:33:37,760 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:38,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:33:38,311 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:38,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:33:38,798 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:39,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:33:39,262 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:39,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:33:39,473 [ scc.git] DEBUG Resetting... 2025-08-31 00:33:39,473 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-08-31 00:33:39,478 [ scc.git] DEBUG HEAD is now at e505e49 Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235 2025-08-31 00:33:39,478 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-08-31 00:33:39,536 [ scc.git] DEBUG Check current status 2025-08-31 00:33:39,536 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:33:39,538 [ scc.git] DEBUG e505e49 Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235 2025-08-31 00:33:39,538 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:33:39,582 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-08-31 00:33:39,585 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-08-31 00:33:39,590 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-08-31 00:33:39,595 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34) 2025-08-31 00:33:39,599 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-08-31 00:33:39,600 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-08-31 00:33:39,600 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-08-31 00:33:39,600 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-08-31 00:33:39,601 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-08-31 00:33:39,601 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-08-31 00:33:39,601 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:33:39,725 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:39,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-08-31 00:33:39,930 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:33:39,930 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:33:39,930 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:33:39,933 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:33:39,936 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:33:39,936 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:33:39,939 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:33:39,941 [ scc.git] DEBUG Already up to date. 2025-08-31 00:33:39,942 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:33:39,942 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:33:39,942 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:33:39,944 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:33:39,989 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:33:39,989 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:33:39,991 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:33:40,027 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbd853ee650> has no local changes 2025-08-31 00:33:40,027 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#507 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/507/)' 2025-08-31 00:33:40,054 [ scc.git] DEBUG [detached HEAD c1bb008] merge master -Dorg -Snone 2025-08-31 00:33:40,054 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-08-31 00:33:40,054 [ scc.merge] INFO Already up to date. 2025-08-31 00:33:40,054 [ scc.merge] INFO 2025-08-31 00:33:40,054 [ scc.merge] INFO 2025-08-31 00:33:40,054 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-08-31 00:33:40,054 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-08-31 00:33:41,972 [ scc.config] DEBUG Found github.token 2025-08-31 00:33:41,974 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:42,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:33:42,411 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:42,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:33:42,861 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:43,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-08-31 00:33:43,045 [ scc.gh] DEBUG 4368 remaining from 5000 (Reset at 00:08 2025-08-31 00:33:43,046 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:33:43,048 [ scc.git] DEBUG Check current status 2025-08-31 00:33:43,048 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:33:43,051 [ scc.git] DEBUG c1bb008 merge master -Dorg -Snone 2025-08-31 00:33:43,051 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:33:43,096 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-08-31 00:33:43,100 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-08-31 00:33:43,105 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-08-31 00:33:43,109 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34) 2025-08-31 00:33:43,114 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-08-31 00:33:43,116 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:33:43,116 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-08-31 00:33:43,118 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-08-31 00:33:43,297 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:43,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-08-31 00:33:43,847 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:44,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:33:44,354 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:44,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:33:44,828 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:45,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:33:45,329 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:45,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:33:45,527 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:33:45,580 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-08-31 00:33:45,580 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:33:45,583 [ scc.git] DEBUG Check current status 2025-08-31 00:33:45,583 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:33:45,585 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-08-31 00:33:45,586 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:33:45,628 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:33:45,779 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:46,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-08-31 00:33:46,307 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:46,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:33:46,843 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:47,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:33:47,303 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:47,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:33:47,826 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:48,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:33:48,042 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:33:48,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-31 00:33:48,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-08-31 00:33:48,086 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:33:48,088 [ scc.git] DEBUG Check current status 2025-08-31 00:33:48,088 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:33:48,091 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build 2025-08-31 00:33:48,091 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:33:48,134 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:33:48,294 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:48,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-08-31 00:33:48,866 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:49,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:33:49,383 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:49,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:33:49,838 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:50,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:33:50,299 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:50,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:33:50,514 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:33:50,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-31 00:33:50,556 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-08-31 00:33:50,556 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:33:50,558 [ scc.git] DEBUG Check current status 2025-08-31 00:33:50,558 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:33:50,561 [ scc.git] DEBUG 70b6235a Merge pull request #464 from dominikl/map_anno_wrapper 2025-08-31 00:33:50,561 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:33:50,604 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:33:50,766 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:51,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-08-31 00:33:51,349 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:51,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:33:51,880 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:52,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:33:52,361 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:52,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:33:52,812 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:53,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:33:53,004 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:33:53,045 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-31 00:33:53,046 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-08-31 00:33:53,046 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:33:53,048 [ scc.git] DEBUG Check current status 2025-08-31 00:33:53,048 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:33:53,051 [ scc.git] DEBUG 573db34 Bump version: 5.9.1 → 5.9.2.dev0 2025-08-31 00:33:53,051 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:33:53,095 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:33:53,095 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-08-31 00:33:53,255 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:53,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-08-31 00:33:53,791 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:54,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:33:54,297 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:54,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:33:54,763 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:54,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:33:55,229 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:55,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:33:55,501 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:33:55,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-31 00:33:55,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-08-31 00:33:55,543 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-31 00:33:55,545 [ scc.git] DEBUG Check current status 2025-08-31 00:33:55,546 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:33:55,549 [ scc.git] DEBUG 2a7c4d2e3 Bump version: 5.29.2 → 5.29.3.dev0 2025-08-31 00:33:55,549 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:33:55,593 [ scc.config] DEBUG Found remote.origin.url 2025-08-31 00:33:55,753 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:56,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-08-31 00:33:56,309 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:56,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-31 00:33:56,856 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:57,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-31 00:33:57,323 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:57,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-31 00:33:57,797 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:57,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-31 00:33:57,995 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:33:58,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-31 00:33:58,037 [ scc.git] DEBUG Resetting... 2025-08-31 00:33:58,037 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-08-31 00:33:58,042 [ scc.git] DEBUG HEAD is now at c1bb008 merge master -Dorg -Snone 2025-08-31 00:33:58,042 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-08-31 00:33:58,098 [ scc.git] DEBUG Check current status 2025-08-31 00:33:58,098 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-31 00:33:58,101 [ scc.git] DEBUG c1bb008 merge master -Dorg -Snone 2025-08-31 00:33:58,101 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-31 00:33:58,143 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-08-31 00:33:58,147 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-08-31 00:33:58,152 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-08-31 00:33:58,156 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34) 2025-08-31 00:33:58,160 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-08-31 00:33:58,161 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-08-31 00:33:58,161 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-08-31 00:33:58,161 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-08-31 00:33:58,161 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-08-31 00:33:58,161 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-08-31 00:33:58,161 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-08-31 00:33:58,161 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:33:58,247 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:58,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-08-31 00:33:58,486 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:33:58,486 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:33:58,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:33:58,488 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:33:58,491 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:33:58,491 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:33:58,493 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:33:58,496 [ scc.git] DEBUG Already up to date. 2025-08-31 00:33:58,496 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:33:58,497 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:33:58,497 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:33:58,499 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:33:58,541 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:33:58,541 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:33:58,544 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:33:58,738 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:59,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-08-31 00:33:59,287 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:33:59,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-08-31 00:33:59,876 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:00,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-08-31 00:34:00,381 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:00,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-08-31 00:34:00,968 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:01,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:34:01,491 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:01,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-08-31 00:34:01,981 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:02,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:34:02,197 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-08-31 00:34:02,197 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:34:02,197 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-08-31 00:34:02,197 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:34:02,197 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:34:02,200 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:34:02,202 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:34:02,202 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:34:02,205 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:34:02,208 [ scc.git] DEBUG Already up to date. 2025-08-31 00:34:02,209 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-08-31 00:34:02,501 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-08-31 00:34:02,502 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-08-31 00:34:02,506 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:34:02,506 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:34:02,506 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:34:02,509 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-08-31 00:34:02,513 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:34:02,515 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-08-31 00:34:02,528 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-08-31 00:34:02,528 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-08-31 00:34:02,528 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-08-31 00:34:02,529 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-08-31 00:34:02,529 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-08-31 00:34:02,529 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-08-31 00:34:02,529 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-08-31 00:34:02,529 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-08-31 00:34:02,529 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-08-31 00:34:02,530 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:34:02,534 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-08-31 00:34:02,534 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-08-31 00:34:02,534 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-08-31 00:34:02,534 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-08-31 00:34:02,534 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-08-31 00:34:02,534 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-08-31 00:34:02,534 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-08-31 00:34:02,534 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-08-31 00:34:02,536 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-08-31 00:34:02,536 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-08-31 00:34:02,536 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:02,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:34:02,751 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:34:02,794 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:34:02,794 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:34:02,797 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:34:02,836 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:34:02,840 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9551d25f10> has no local changes 2025-08-31 00:34:02,840 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#507 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/507/)' 2025-08-31 00:34:02,848 [ scc.git] DEBUG [detached HEAD b16a7b2] merge master -Dorg -Ssuccess-only 2025-08-31 00:34:02,848 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-31 00:34:02,848 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:34:03,004 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:03,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-08-31 00:34:03,594 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:03,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-08-31 00:34:04,097 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:04,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2025-08-31 00:34:04,616 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:04,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-08-31 00:34:05,134 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:05,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-08-31 00:34:05,612 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:05,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-08-31 00:34:06,178 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:06,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:34:06,677 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:06,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-08-31 00:34:07,168 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:07,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:34:07,411 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-08-31 00:34:07,662 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:07,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-08-31 00:34:08,212 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:08,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-08-31 00:34:08,717 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:08,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-08-31 00:34:09,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:09,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-08-31 00:34:09,459 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:34:09,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-08-31 00:34:09,460 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:34:09,460 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:34:09,463 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:34:09,465 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:34:09,465 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:34:09,468 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:34:09,471 [ scc.git] DEBUG Already up to date. 2025-08-31 00:34:09,472 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-08-31 00:34:09,762 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-08-31 00:34:09,762 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-08-31 00:34:09,766 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:34:09,766 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:34:09,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:34:09,769 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-08-31 00:34:09,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:34:09,775 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-08-31 00:34:09,785 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-08-31 00:34:09,786 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:34:09,790 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-08-31 00:34:09,790 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-08-31 00:34:09,790 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-08-31 00:34:09,793 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:09,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:34:09,980 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:34:10,022 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:34:10,022 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:34:10,024 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:34:10,065 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:34:10,070 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9553e171d0> has no local changes 2025-08-31 00:34:10,070 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#507 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/507/)' 2025-08-31 00:34:10,077 [ scc.git] DEBUG [detached HEAD 6dbe8a4] merge master -Dorg -Ssuccess-only 2025-08-31 00:34:10,077 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-31 00:34:10,077 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:34:10,232 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:10,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-08-31 00:34:10,870 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:11,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/472 HTTP/1.1" 200 None 2025-08-31 00:34:11,388 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:11,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/472/comments HTTP/1.1" 200 None 2025-08-31 00:34:11,943 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:12,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64 HTTP/1.1" 200 None 2025-08-31 00:34:12,503 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:12,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:34:13,165 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:13,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:34:13,670 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:13,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64 HTTP/1.1" 200 None 2025-08-31 00:34:14,154 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:14,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/fbcef67768f4e37313bc42a18b5fb078964fcf64?per_page=1 HTTP/1.1" 200 None 2025-08-31 00:34:14,633 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:14,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64 HTTP/1.1" 200 None 2025-08-31 00:34:15,194 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:15,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64/status HTTP/1.1" 200 None 2025-08-31 00:34:15,429 [ scc.repo] DEBUG - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3' 2025-08-31 00:34:15,680 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:15,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None 2025-08-31 00:34:16,178 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:16,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None 2025-08-31 00:34:16,664 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:16,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None 2025-08-31 00:34:17,185 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:17,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None 2025-08-31 00:34:17,696 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:17,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450/comments HTTP/1.1" 200 None 2025-08-31 00:34:18,188 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:18,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None 2025-08-31 00:34:18,709 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:18,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None 2025-08-31 00:34:18,991 [ scc.repo] DEBUG # ... Exclude label: exclude 2025-08-31 00:34:19,242 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:19,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-08-31 00:34:19,725 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:19,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-08-31 00:34:20,235 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:20,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-08-31 00:34:20,808 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:21,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:34:21,311 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:21,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-08-31 00:34:21,803 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:22,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:34:22,138 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-08-31 00:34:22,390 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:22,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-08-31 00:34:22,913 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:23,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-08-31 00:34:23,387 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:23,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-08-31 00:34:23,918 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:24,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:34:24,427 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:24,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:34:24,911 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:25,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-08-31 00:34:25,431 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:25,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2025-08-31 00:34:25,952 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:26,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-08-31 00:34:26,523 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:26,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:34:27,033 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:27,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-08-31 00:34:27,525 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:27,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:34:27,741 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-08-31 00:34:27,992 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:28,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-08-31 00:34:28,503 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:28,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-08-31 00:34:28,973 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:29,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-08-31 00:34:29,516 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:29,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:34:30,007 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:30,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-08-31 00:34:30,552 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:30,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:34:30,764 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-08-31 00:34:31,015 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:31,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-08-31 00:34:31,525 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:31,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-08-31 00:34:32,039 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:32,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-08-31 00:34:32,569 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:32,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-08-31 00:34:33,055 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:33,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-08-31 00:34:33,588 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:33,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:34:34,092 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:34,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-08-31 00:34:34,577 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:34,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:34:34,798 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-08-31 00:34:34,799 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:34:34,799 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-08-31 00:34:34,799 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:34:34,799 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:34:34,802 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:34:34,805 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:34:34,805 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:34:34,808 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:34:34,811 [ scc.git] DEBUG Already up to date. 2025-08-31 00:34:34,811 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-08-31 00:34:35,106 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-31 00:34:35,106 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-08-31 00:34:35,110 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-08-31 00:34:35,416 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-31 00:34:35,416 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-08-31 00:34:35,421 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-08-31 00:34:35,701 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-31 00:34:35,701 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-08-31 00:34:35,706 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-08-31 00:34:35,985 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-31 00:34:35,985 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-08-31 00:34:35,989 [ scc.git] DEBUG Calling 'git fetch origin pull/472/head' 2025-08-31 00:34:36,265 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-31 00:34:36,265 [ scc.git] DEBUG * branch refs/pull/472/head -> FETCH_HEAD 2025-08-31 00:34:36,269 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:34:36,269 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:34:36,269 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:34:36,272 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-08-31 00:34:36,285 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:34:36,288 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-08-31 00:34:36,311 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-08-31 00:34:36,311 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-08-31 00:34:36,313 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:34:36,317 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-08-31 00:34:36,317 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-08-31 00:34:36,317 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-08-31 00:34:36,320 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:36,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:34:36,534 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-08-31 00:34:36,547 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:34:36,550 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-08-31 00:34:36,571 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:34:36,574 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-08-31 00:34:36,574 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-08-31 00:34:36,574 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-08-31 00:34:36,574 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-08-31 00:34:36,574 [ scc.git] DEBUG create mode 100644 connect.py 2025-08-31 00:34:36,786 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:37,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:34:37,014 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-08-31 00:34:37,027 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:34:37,030 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-08-31 00:34:37,054 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-08-31 00:34:37,056 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:34:37,060 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-08-31 00:34:37,060 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-08-31 00:34:37,266 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:37,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:34:37,456 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-08-31 00:34:37,470 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:34:37,473 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-08-31 00:34:37,508 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-08-31 00:34:37,510 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:34:37,517 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-08-31 00:34:37,517 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-08-31 00:34:37,708 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:37,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:34:37,902 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fbcef67768f4e37313bc42a18b5fb078964fcf64' 2025-08-31 00:34:37,916 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:34:37,918 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 472 (Remove PyOpenSSL injection via urllib3) fbcef67768f4e37313bc42a18b5fb078964fcf64' 2025-08-31 00:34:37,943 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:34:37,947 [ scc.git] DEBUG setup.py | 1 - 2025-08-31 00:34:37,947 [ scc.git] DEBUG src/omero/util/upgrade_check.py | 7 ------- 2025-08-31 00:34:37,947 [ scc.git] DEBUG 2 files changed, 8 deletions(-) 2025-08-31 00:34:38,154 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:38,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:34:38,361 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:34:38,402 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:34:38,402 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:34:38,405 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:34:38,445 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:34:38,452 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f955113c210> has no local changes 2025-08-31 00:34:38,452 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3' Generated by OMERO-python-superbuild-push#507 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/507/)' 2025-08-31 00:34:38,459 [ scc.git] DEBUG [detached HEAD 8c370f1d] merge master -Dorg -Ssuccess-only 2025-08-31 00:34:38,460 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-31 00:34:38,460 [ scc.git] INFO Overriding base-branch from master to develop 2025-08-31 00:34:38,460 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:34:38,613 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:38,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-08-31 00:34:39,190 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:39,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-08-31 00:34:39,711 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:39,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-08-31 00:34:40,212 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:40,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-08-31 00:34:40,791 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:41,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:34:41,310 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:41,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:34:41,819 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:42,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-08-31 00:34:42,308 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:42,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:34:42,540 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-08-31 00:34:42,792 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:43,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-08-31 00:34:43,307 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:43,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-08-31 00:34:43,807 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:44,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-08-31 00:34:44,393 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:44,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:34:44,907 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:45,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-08-31 00:34:45,424 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:45,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:34:45,644 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-08-31 00:34:45,897 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:46,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-08-31 00:34:46,400 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:46,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-08-31 00:34:46,939 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:47,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-08-31 00:34:47,484 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:47,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-08-31 00:34:47,750 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:34:47,750 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-08-31 00:34:47,750 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:34:47,750 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:34:47,753 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-08-31 00:34:47,756 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:34:47,756 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-08-31 00:34:47,759 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-08-31 00:34:47,762 [ scc.git] DEBUG Already up to date. 2025-08-31 00:34:47,762 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-08-31 00:34:48,051 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-08-31 00:34:48,051 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-08-31 00:34:48,056 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-08-31 00:34:48,346 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-08-31 00:34:48,346 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-08-31 00:34:48,350 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:34:48,351 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:34:48,351 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:34:48,353 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-31 00:34:48,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:34:48,362 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-31 00:34:48,373 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-08-31 00:34:48,374 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-31 00:34:48,374 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-31 00:34:48,377 [ scc.git] DEBUG Calling 'git reset --hard 573db340d5d1429fa17c7e486206948412a7c150' 2025-08-31 00:34:48,382 [ scc.git] DEBUG HEAD is now at 573db34 Bump version: 5.9.1 → 5.9.2.dev0 2025-08-31 00:34:48,384 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:48,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:34:48,593 [ scc.git] DEBUG Calling 'git merge-base 573db340d5d1429fa17c7e486206948412a7c150 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-31 00:34:48,600 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..573db340d5d1429fa17c7e486206948412a7c150' 2025-08-31 00:34:48,604 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#507](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/507/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/507/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-08-31 00:34:48,607 [ scc.config] DEBUG Found github.token 2025-08-31 00:34:48,607 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-08-31 00:34:48,607 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-08-31 00:34:48,612 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:34:48,614 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-08-31 00:34:48,625 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:34:48,628 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-08-31 00:34:48,628 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-08-31 00:34:48,845 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:49,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:34:49,029 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:34:49,073 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:34:49,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:34:49,076 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:34:49,119 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:34:49,122 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f95512525d0> has no local changes 2025-08-31 00:34:49,123 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#507 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/507/)' 2025-08-31 00:34:49,129 [ scc.git] DEBUG [detached HEAD 773d50a] merge master -Dorg -Ssuccess-only 2025-08-31 00:34:49,129 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-31 00:34:49,130 [ scc.repo] DEBUG ## PRs found: 2025-08-31 00:34:49,281 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:49,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-08-31 00:34:49,965 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:50,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/629 HTTP/1.1" 200 None 2025-08-31 00:34:50,505 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:50,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/628 HTTP/1.1" 200 None 2025-08-31 00:34:51,017 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:51,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-08-31 00:34:51,566 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:51,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:34:52,115 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:52,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:34:52,637 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:52,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-08-31 00:34:53,121 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:53,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b8c7989c9900270d7cf27523f2649bbb903c7a60?per_page=1 HTTP/1.1" 200 None 2025-08-31 00:34:53,603 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:53,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-08-31 00:34:54,154 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:54,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/status HTTP/1.1" 200 None 2025-08-31 00:34:54,386 [ scc.repo] DEBUG - PR 628 jburel 'Add protocol required since Django4' 2025-08-31 00:34:54,638 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:54,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/619 HTTP/1.1" 200 None 2025-08-31 00:34:55,142 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:55,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-08-31 00:34:55,721 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:55,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:34:56,247 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:56,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:34:56,778 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:57,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-08-31 00:34:57,281 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:57,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6dbfcebfee72e20f36a434fdc8850930d89acdac?per_page=1 HTTP/1.1" 200 None 2025-08-31 00:34:57,750 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:58,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-08-31 00:34:58,297 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:58,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/status HTTP/1.1" 200 None 2025-08-31 00:34:58,520 [ scc.repo] DEBUG - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-08-31 00:34:58,772 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:59,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None 2025-08-31 00:34:59,276 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:34:59,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None 2025-08-31 00:34:59,805 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:00,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None 2025-08-31 00:35:00,366 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:00,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:35:00,915 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:01,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:35:01,462 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:01,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None 2025-08-31 00:35:01,926 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:02,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/cca34cb278cac5fb8088df75cc4fe5f315810342?per_page=1 HTTP/1.1" 200 None 2025-08-31 00:35:02,410 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:02,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None 2025-08-31 00:35:02,969 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:03,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/status HTTP/1.1" 200 None 2025-08-31 00:35:03,217 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display' 2025-08-31 00:35:03,469 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:03,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None 2025-08-31 00:35:03,997 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:04,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None 2025-08-31 00:35:04,491 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:04,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-08-31 00:35:05,104 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:05,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:35:05,619 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:05,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:35:06,166 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:06,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-08-31 00:35:06,719 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:06,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None 2025-08-31 00:35:07,193 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:07,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-08-31 00:35:07,689 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:07,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None 2025-08-31 00:35:07,908 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-08-31 00:35:08,160 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:08,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-08-31 00:35:08,684 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:08,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2025-08-31 00:35:09,201 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:09,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-08-31 00:35:09,786 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:10,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:35:10,308 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:10,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:35:10,846 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:11,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-08-31 00:35:11,389 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:11,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-08-31 00:35:11,861 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:12,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-08-31 00:35:12,359 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:12,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-08-31 00:35:12,587 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-08-31 00:35:12,839 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:13,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-08-31 00:35:13,376 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:13,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-08-31 00:35:13,952 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:14,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:35:14,464 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:14,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:35:14,995 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:15,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-08-31 00:35:15,553 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:15,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-08-31 00:35:16,027 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:16,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-08-31 00:35:16,502 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:16,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-08-31 00:35:16,737 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2025-08-31 00:35:16,989 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:17,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-08-31 00:35:17,518 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:17,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-08-31 00:35:17,996 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:18,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-08-31 00:35:18,546 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:18,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:35:19,069 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:19,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:35:19,604 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:19,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-08-31 00:35:20,128 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:20,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-08-31 00:35:20,604 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:20,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-08-31 00:35:21,065 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:21,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-08-31 00:35:21,304 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-08-31 00:35:21,555 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:21,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-08-31 00:35:22,076 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:22,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-08-31 00:35:22,573 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:22,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-08-31 00:35:23,121 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:23,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:35:23,683 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:23,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-31 00:35:24,187 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:24,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-08-31 00:35:24,716 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:24,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-08-31 00:35:25,220 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:25,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-08-31 00:35:25,704 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:25,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-08-31 00:35:25,927 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-08-31 00:35:26,179 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:26,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-08-31 00:35:26,703 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:26,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-08-31 00:35:27,201 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:27,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-08-31 00:35:27,737 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:27,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-08-31 00:35:28,242 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:28,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-08-31 00:35:28,781 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:29,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:35:29,310 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:29,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-08-31 00:35:29,782 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:29,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:35:29,970 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-08-31 00:35:30,222 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:30,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-08-31 00:35:30,727 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:30,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-08-31 00:35:31,223 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:31,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-08-31 00:35:31,756 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:32,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:35:32,256 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:32,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-08-31 00:35:32,769 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:32,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:35:32,996 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-08-31 00:35:33,248 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:33,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-08-31 00:35:33,757 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:33,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-08-31 00:35:34,236 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:34,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-08-31 00:35:34,783 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:35,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-31 00:35:35,266 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:35,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-08-31 00:35:35,784 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:35,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06b0073db19eeccb9698860f75639084ad1b1200?per_page=1 HTTP/1.1" 200 2 2025-08-31 00:35:35,978 [ scc.repo] DEBUG - PR 168 stick 'Changes to nginx @maintenance handler' 2025-08-31 00:35:35,978 [ scc.repo] DEBUG ## Branches found: 2025-08-31 00:35:35,978 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-08-31 00:35:35,979 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:35:35,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:35:35,981 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-31 00:35:35,984 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-31 00:35:35,984 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-31 00:35:35,988 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-31 00:35:35,992 [ scc.git] DEBUG Already up to date. 2025-08-31 00:35:35,992 [ scc.git] DEBUG Calling 'git fetch origin pull/168/head' 2025-08-31 00:35:36,299 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-31 00:35:36,299 [ scc.git] DEBUG * branch refs/pull/168/head -> FETCH_HEAD 2025-08-31 00:35:36,303 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-08-31 00:35:36,584 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-31 00:35:36,585 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-08-31 00:35:36,589 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-08-31 00:35:36,868 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-31 00:35:36,869 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-08-31 00:35:36,873 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-08-31 00:35:37,151 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-31 00:35:37,151 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-08-31 00:35:37,156 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-08-31 00:35:37,431 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-31 00:35:37,431 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-08-31 00:35:37,436 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-08-31 00:35:37,717 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-31 00:35:37,717 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-08-31 00:35:37,722 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-08-31 00:35:37,998 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-31 00:35:37,998 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-08-31 00:35:38,003 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-08-31 00:35:38,296 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-31 00:35:38,296 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-08-31 00:35:38,301 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head' 2025-08-31 00:35:38,585 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-31 00:35:38,585 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD 2025-08-31 00:35:38,589 [ scc.git] DEBUG Calling 'git fetch origin pull/619/head' 2025-08-31 00:35:38,863 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-31 00:35:38,863 [ scc.git] DEBUG * branch refs/pull/619/head -> FETCH_HEAD 2025-08-31 00:35:38,868 [ scc.git] DEBUG Calling 'git fetch origin pull/628/head' 2025-08-31 00:35:39,150 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-31 00:35:39,150 [ scc.git] DEBUG * branch refs/pull/628/head -> FETCH_HEAD 2025-08-31 00:35:39,155 [ scc.git] DEBUG ## Unique users: [] 2025-08-31 00:35:39,155 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:35:39,155 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:35:39,158 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06b0073db19eeccb9698860f75639084ad1b1200' 2025-08-31 00:35:39,167 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:35:39,169 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 168 (Changes to nginx @maintenance handler) 06b0073db19eeccb9698860f75639084ad1b1200' 2025-08-31 00:35:39,190 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:35:39,194 [ scc.git] DEBUG omeroweb/templates/nginx-development.conf.template | 2 +- 2025-08-31 00:35:39,195 [ scc.git] DEBUG omeroweb/templates/nginx-location.conf.template | 3 ++- 2025-08-31 00:35:39,195 [ scc.git] DEBUG omeroweb/templates/nginx.conf.template | 2 +- 2025-08-31 00:35:39,195 [ scc.git] DEBUG test/unit/reference_templates/nginx-development-withoptions.conf | 2 +- 2025-08-31 00:35:39,195 [ scc.git] DEBUG test/unit/reference_templates/nginx-development.conf | 2 +- 2025-08-31 00:35:39,195 [ scc.git] DEBUG test/unit/reference_templates/nginx-location-withoptions.conf | 3 ++- 2025-08-31 00:35:39,195 [ scc.git] DEBUG test/unit/reference_templates/nginx-location.conf | 3 ++- 2025-08-31 00:35:39,195 [ scc.git] DEBUG test/unit/reference_templates/nginx-withoptions.conf | 2 +- 2025-08-31 00:35:39,195 [ scc.git] DEBUG test/unit/reference_templates/nginx.conf | 2 +- 2025-08-31 00:35:39,195 [ scc.git] DEBUG test/unit/test_web.py | 1 + 2025-08-31 00:35:39,195 [ scc.git] DEBUG 10 files changed, 13 insertions(+), 9 deletions(-) 2025-08-31 00:35:39,197 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:39,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:35:39,414 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-08-31 00:35:39,423 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:35:39,426 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-08-31 00:35:39,448 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-08-31 00:35:39,448 [ scc.git] DEBUG Auto-merging setup.py 2025-08-31 00:35:39,449 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:35:39,453 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-08-31 00:35:39,453 [ scc.git] DEBUG setup.py | 1 + 2025-08-31 00:35:39,453 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-08-31 00:35:39,666 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:39,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:35:39,858 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-08-31 00:35:39,867 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:35:39,870 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-08-31 00:35:39,894 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-08-31 00:35:39,894 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-08-31 00:35:39,895 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:35:39,900 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-08-31 00:35:39,900 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-08-31 00:35:39,900 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-08-31 00:35:40,110 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:40,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:35:40,298 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-08-31 00:35:40,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:35:40,310 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-08-31 00:35:40,332 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:35:40,336 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-08-31 00:35:40,337 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-31 00:35:40,550 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:40,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:35:40,747 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-08-31 00:35:40,756 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:35:40,759 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-08-31 00:35:40,780 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:35:40,785 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-08-31 00:35:40,785 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-08-31 00:35:40,999 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:41,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:35:41,204 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-08-31 00:35:41,214 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:35:41,216 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-08-31 00:35:41,238 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:35:41,244 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-08-31 00:35:41,244 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-08-31 00:35:41,245 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-08-31 00:35:41,245 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-08-31 00:35:41,245 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-08-31 00:35:41,245 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-08-31 00:35:41,245 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-08-31 00:35:41,245 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-08-31 00:35:41,245 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-08-31 00:35:41,245 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-08-31 00:35:41,245 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-08-31 00:35:41,245 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-08-31 00:35:41,456 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:41,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:35:41,675 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-08-31 00:35:41,685 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:35:41,687 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-08-31 00:35:41,715 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-08-31 00:35:41,717 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:35:41,723 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-08-31 00:35:41,723 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-08-31 00:35:41,723 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-08-31 00:35:41,723 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-08-31 00:35:41,927 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:42,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:35:42,128 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-08-31 00:35:42,138 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:35:42,140 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-08-31 00:35:42,163 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:35:42,167 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++ 2025-08-31 00:35:42,167 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++---------- 2025-08-31 00:35:42,167 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-) 2025-08-31 00:35:42,380 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:42,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:35:42,587 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cca34cb278cac5fb8088df75cc4fe5f315810342' 2025-08-31 00:35:42,597 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:35:42,600 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) cca34cb278cac5fb8088df75cc4fe5f315810342' 2025-08-31 00:35:42,623 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:35:42,627 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 20 ++++++++++++-- 2025-08-31 00:35:42,627 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 31 +++++++++++++++------- 2025-08-31 00:35:42,627 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 2 ++ 2025-08-31 00:35:42,628 [ scc.git] DEBUG 3 files changed, 42 insertions(+), 11 deletions(-) 2025-08-31 00:35:42,839 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:43,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:35:43,032 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-08-31 00:35:43,042 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:35:43,044 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 619 (Permit subpackages as app plugins) 6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-08-31 00:35:43,066 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-08-31 00:35:43,067 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:35:43,071 [ scc.git] DEBUG omeroweb/settings.py | 9 ++++----- 2025-08-31 00:35:43,072 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 5 deletions(-) 2025-08-31 00:35:43,284 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:43,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:35:43,463 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8c7989c9900270d7cf27523f2649bbb903c7a60' 2025-08-31 00:35:43,474 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:35:43,476 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 628 (Add protocol required since Django4) b8c7989c9900270d7cf27523f2649bbb903c7a60' 2025-08-31 00:35:43,497 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-08-31 00:35:43,499 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-31 00:35:43,503 [ scc.git] DEBUG omeroweb/settings.py | 4 ++-- 2025-08-31 00:35:43,503 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2025-08-31 00:35:43,716 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:43,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:35:43,917 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-31 00:35:43,960 [ scc.git] DEBUG Get sha1 of %s 2025-08-31 00:35:43,960 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-31 00:35:43,962 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:35:44,003 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:35:44,012 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9551068290> has no local changes 2025-08-31 00:35:44,012 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) Already up to date. Merged PRs: - PR 168 stick 'Changes to nginx @maintenance handler' - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 628 jburel 'Add protocol required since Django4' Generated by OMERO-python-superbuild-push#507 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/507/)' 2025-08-31 00:35:44,022 [ scc.git] DEBUG [detached HEAD 373b853bd] merge master -Dorg -Ssuccess-only 2025-08-31 00:35:44,022 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-31 00:35:44,022 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-31 00:35:44,072 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-08-31 00:35:44,169 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:44,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:35:44,472 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-08-31 00:35:44,717 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:44,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:35:44,929 [ scc.config] DEBUG Found submodule.omero-py.url 2025-08-31 00:35:45,175 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:45,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:35:45,400 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-08-31 00:35:45,645 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:45,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:35:45,844 [ scc.config] DEBUG Found submodule.omero-web.url 2025-08-31 00:35:46,089 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-31 00:35:46,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-31 00:35:46,283 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-31 00:35:46,312 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9551d25710> has local changes 2025-08-31 00:35:46,312 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) Already up to date. Merged PRs: - PR 168 stick 'Changes to nginx @maintenance handler' - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 628 jburel 'Add protocol required since Django4' Generated by OMERO-python-superbuild-push#507 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/507/)' 2025-08-31 00:35:46,321 [ scc.git] DEBUG [detached HEAD b4054a7] merge master -Dorg -Ssuccess-only 2025-08-31 00:35:46,321 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-08-31 00:35:46,321 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-08-31 00:35:46,321 [ scc.merge] INFO Already up to date. 2025-08-31 00:35:46,321 [ scc.merge] INFO 2025-08-31 00:35:46,321 [ scc.merge] INFO 2025-08-31 00:35:46,321 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-08-31 00:35:46,321 [ scc.merge] INFO Already up to date. 2025-08-31 00:35:46,321 [ scc.merge] INFO 2025-08-31 00:35:46,321 [ scc.merge] INFO Merged PRs: 2025-08-31 00:35:46,321 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-08-31 00:35:46,321 [ scc.merge] INFO 2025-08-31 00:35:46,321 [ scc.merge] INFO Repository: ome/omero-marshal 2025-08-31 00:35:46,321 [ scc.merge] INFO Excluded PRs: 2025-08-31 00:35:46,321 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-08-31 00:35:46,321 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-08-31 00:35:46,321 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-08-31 00:35:46,321 [ scc.merge] INFO Already up to date. 2025-08-31 00:35:46,321 [ scc.merge] INFO 2025-08-31 00:35:46,321 [ scc.merge] INFO Merged PRs: 2025-08-31 00:35:46,321 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-08-31 00:35:46,321 [ scc.merge] INFO 2025-08-31 00:35:46,322 [ scc.merge] INFO Repository: ome/omero-py 2025-08-31 00:35:46,322 [ scc.merge] INFO Excluded PRs: 2025-08-31 00:35:46,322 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric) 2025-08-31 00:35:46,322 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) 2025-08-31 00:35:46,322 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric) 2025-08-31 00:35:46,322 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) 2025-08-31 00:35:46,322 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-08-31 00:35:46,322 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) 2025-08-31 00:35:46,322 [ scc.merge] INFO Already up to date. 2025-08-31 00:35:46,322 [ scc.merge] INFO 2025-08-31 00:35:46,322 [ scc.merge] INFO Merged PRs: 2025-08-31 00:35:46,322 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-08-31 00:35:46,322 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-08-31 00:35:46,322 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-08-31 00:35:46,322 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-08-31 00:35:46,322 [ scc.merge] INFO - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3' 2025-08-31 00:35:46,322 [ scc.merge] INFO 2025-08-31 00:35:46,322 [ scc.merge] INFO Repository: ome/omero-scripts 2025-08-31 00:35:46,322 [ scc.merge] INFO Excluded PRs: 2025-08-31 00:35:46,322 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-08-31 00:35:46,322 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-08-31 00:35:46,322 [ scc.merge] INFO Already up to date. 2025-08-31 00:35:46,322 [ scc.merge] INFO 2025-08-31 00:35:46,322 [ scc.merge] INFO Merged PRs: 2025-08-31 00:35:46,322 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-08-31 00:35:46,322 [ scc.merge] INFO 2025-08-31 00:35:46,322 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-31 00:35:46,322 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-08-31 00:35:46,322 [ scc.merge] INFO 2025-08-31 00:35:46,322 [ scc.merge] INFO Repository: ome/omero-web 2025-08-31 00:35:46,322 [ scc.merge] INFO Excluded PRs: 2025-08-31 00:35:46,322 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-08-31 00:35:46,323 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-08-31 00:35:46,323 [ scc.merge] INFO Already up to date. 2025-08-31 00:35:46,323 [ scc.merge] INFO 2025-08-31 00:35:46,323 [ scc.merge] INFO Merged PRs: 2025-08-31 00:35:46,323 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' 2025-08-31 00:35:46,323 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-08-31 00:35:46,323 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-08-31 00:35:46,323 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-08-31 00:35:46,323 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-08-31 00:35:46,323 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2025-08-31 00:35:46,323 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-08-31 00:35:46,323 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-08-31 00:35:46,323 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2025-08-31 00:35:46,323 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-08-31 00:35:46,323 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4' 2025-08-31 00:35:46,323 [ scc.merge] INFO 2025-08-31 00:35:46,323 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-08-31 00:35:46,323 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:35:46,325 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-08-31 00:35:46,325 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:35:46,328 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-31 00:35:46,328 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-08-31 00:35:46,328 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:35:46,330 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-31 00:35:46,330 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-08-31 00:35:46,330 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:35:46,332 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-31 00:35:46,333 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-08-31 00:35:46,333 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:35:46,335 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-31 00:35:46,335 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-08-31 00:35:46,335 [ scc.git] DEBUG Calling 'git remote' 2025-08-31 00:35:46,337 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 6d44f66 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 70b6235a nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 573db34 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 2a7c4d2e3 nothing to commit, working tree clean HEAD detached from e505e49 nothing to commit, working tree clean 2025-08-31 00:36:16,159 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS