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+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-05-29 00:33:52,410 [  scc.config] DEBUG Found github.token
2024-05-29 00:33:52,413 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-05-29 00:33:52,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-29 00:33:53,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-29 00:33:53,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-05-29 00:33:53,445 [      scc.gh] DEBUG 4927 remaining from 5000 (Reset at 01:05
2024-05-29 00:33:53,445 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-29 00:33:53,449 [     scc.git] DEBUG Check current status
2024-05-29 00:33:53,449 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-29 00:33:53,452 [     scc.git] DEBUG c5de36a Merge pull request #281 from ome/dependabot/submodules/omero-web-9c94fd4
2024-05-29 00:33:53,452 [     scc.git] DEBUG Calling 'git submodule status'
2024-05-29 00:33:53,494 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-05-29 00:33:53,497 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-05-29 00:33:53,553 [     scc.git] DEBUG  53a327b85034cf09ae5e7255e6fd70b59392b680 omero-py (v5.19.2-5-g53a327b8)
2024-05-29 00:33:53,558 [     scc.git] DEBUG  5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-05-29 00:33:53,561 [     scc.git] DEBUG  9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493)
2024-05-29 00:33:53,565 [  scc.config] DEBUG Found remote.origin.url
2024-05-29 00:33:53,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-05-29 00:33:54,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-29 00:33:54,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-29 00:33:55,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-29 00:33:55,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-29 00:33:55,738 [     scc.git] DEBUG Resetting...
2024-05-29 00:33:55,738 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-05-29 00:33:55,744 [     scc.git] DEBUG HEAD is now at c5de36a Merge pull request #281 from ome/dependabot/submodules/omero-web-9c94fd4
2024-05-29 00:33:55,745 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-05-29 00:33:55,801 [     scc.git] DEBUG Check current status
2024-05-29 00:33:55,801 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-29 00:33:55,805 [     scc.git] DEBUG c5de36a Merge pull request #281 from ome/dependabot/submodules/omero-web-9c94fd4
2024-05-29 00:33:55,806 [     scc.git] DEBUG Calling 'git submodule status'
2024-05-29 00:33:55,845 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-05-29 00:33:55,847 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-05-29 00:33:55,851 [     scc.git] DEBUG  53a327b85034cf09ae5e7255e6fd70b59392b680 omero-py (v5.19.2-5-g53a327b8)
2024-05-29 00:33:55,855 [     scc.git] DEBUG  5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-05-29 00:33:55,858 [     scc.git] DEBUG  9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493)
2024-05-29 00:33:55,859 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-05-29 00:33:55,859 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-05-29 00:33:55,859 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-05-29 00:33:55,859 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-05-29 00:33:55,859 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-05-29 00:33:55,859 [    scc.repo] DEBUG ## PRs found:
2024-05-29 00:33:56,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-05-29 00:33:56,201 [    scc.repo] DEBUG ## Branches found:
2024-05-29 00:33:56,201 [     scc.git] DEBUG Get sha1 of %s
2024-05-29 00:33:56,201 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:33:56,205 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-29 00:33:56,209 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-29 00:33:56,209 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-29 00:33:56,215 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-29 00:33:56,219 [     scc.git] DEBUG Already up to date.

2024-05-29 00:33:56,219 [     scc.git] DEBUG ## Unique users: []
2024-05-29 00:33:56,220 [     scc.git] DEBUG Get sha1 of %s
2024-05-29 00:33:56,220 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:33:56,223 [     scc.git] DEBUG Calling 'git submodule update'
2024-05-29 00:33:56,264 [     scc.git] DEBUG Get sha1 of %s
2024-05-29 00:33:56,264 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:33:56,268 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-05-29 00:33:56,411 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f75c379b130> has no local changes
2024-05-29 00:33:56,412 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-python-superbuild
Already up to date.


Generated by OMERO-python-superbuild-push#76 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/76/)'
2024-05-29 00:33:56,438 [     scc.git] DEBUG [detached HEAD 9963549] merge master -Dorg -Snone
2024-05-29 00:33:56,439 [   scc.merge] INFO  Repository: ome/omero-python-superbuild
2024-05-29 00:33:56,439 [   scc.merge] INFO  Already up to date.
2024-05-29 00:33:56,439 [   scc.merge] INFO  
2024-05-29 00:33:56,439 [   scc.merge] INFO  
2024-05-29 00:33:56,439 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-05-29 00:33:56,439 [     scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master

submodules:
  omero-scripts:
    base-branch: develop
2024-05-29 00:33:58,979 [  scc.config] DEBUG Found github.token
2024-05-29 00:33:58,982 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-05-29 00:33:59,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-29 00:33:59,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-29 00:34:00,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-05-29 00:34:00,011 [      scc.gh] DEBUG 4919 remaining from 5000 (Reset at 01:05
2024-05-29 00:34:00,012 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-29 00:34:00,017 [     scc.git] DEBUG Check current status
2024-05-29 00:34:00,017 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-29 00:34:00,021 [     scc.git] DEBUG 9963549 merge master -Dorg -Snone
2024-05-29 00:34:00,021 [     scc.git] DEBUG Calling 'git submodule status'
2024-05-29 00:34:00,064 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-05-29 00:34:00,067 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-05-29 00:34:00,071 [     scc.git] DEBUG  53a327b85034cf09ae5e7255e6fd70b59392b680 omero-py (v5.19.2-5-g53a327b8)
2024-05-29 00:34:00,075 [     scc.git] DEBUG  5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-05-29 00:34:00,078 [     scc.git] DEBUG  9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493)
2024-05-29 00:34:00,083 [  scc.config] DEBUG Found remote.origin.url
2024-05-29 00:34:00,083 [     scc.git] DEBUG Reading repository configuration from repositories.yml
2024-05-29 00:34:00,085 [     scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
  omero-scripts:
    base-branch: develop

2024-05-29 00:34:00,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-05-29 00:34:00,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-29 00:34:01,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-29 00:34:01,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-29 00:34:02,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-29 00:34:02,235 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-29 00:34:02,284 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-05-29 00:34:02,284 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-29 00:34:02,288 [     scc.git] DEBUG Check current status
2024-05-29 00:34:02,288 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-29 00:34:02,292 [     scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-05-29 00:34:02,292 [     scc.git] DEBUG Calling 'git submodule status'
2024-05-29 00:34:02,339 [  scc.config] DEBUG Found remote.origin.url
2024-05-29 00:34:02,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-05-29 00:34:03,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-29 00:34:03,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-29 00:34:04,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-29 00:34:04,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-29 00:34:04,507 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-29 00:34:04,550 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-29 00:34:04,551 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-05-29 00:34:04,551 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-29 00:34:04,559 [     scc.git] DEBUG Check current status
2024-05-29 00:34:04,559 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-29 00:34:04,563 [     scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-05-29 00:34:04,564 [     scc.git] DEBUG Calling 'git submodule status'
2024-05-29 00:34:04,613 [  scc.config] DEBUG Found remote.origin.url
2024-05-29 00:34:05,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-05-29 00:34:05,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-29 00:34:05,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-29 00:34:06,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-29 00:34:06,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-29 00:34:06,735 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-29 00:34:06,776 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-29 00:34:06,777 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-05-29 00:34:06,777 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-29 00:34:06,781 [     scc.git] DEBUG Check current status
2024-05-29 00:34:06,781 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-29 00:34:06,785 [     scc.git] DEBUG 53a327b8 Merge pull request #407 from jburel/install_conda_forge
2024-05-29 00:34:06,786 [     scc.git] DEBUG Calling 'git submodule status'
2024-05-29 00:34:06,847 [  scc.config] DEBUG Found remote.origin.url
2024-05-29 00:34:07,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-05-29 00:34:07,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-29 00:34:08,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-29 00:34:08,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-29 00:34:08,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-29 00:34:08,960 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-29 00:34:09,000 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-29 00:34:09,002 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-05-29 00:34:09,002 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-29 00:34:09,006 [     scc.git] DEBUG Check current status
2024-05-29 00:34:09,007 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-29 00:34:09,011 [     scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0
2024-05-29 00:34:09,011 [     scc.git] DEBUG Calling 'git submodule status'
2024-05-29 00:34:09,052 [  scc.config] DEBUG Found remote.origin.url
2024-05-29 00:34:09,053 [     scc.git] DEBUG Repository configuration:
base-branch: develop

2024-05-29 00:34:09,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-05-29 00:34:09,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-29 00:34:10,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-29 00:34:10,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-29 00:34:11,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-29 00:34:11,241 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-29 00:34:11,282 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-29 00:34:11,284 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-05-29 00:34:11,284 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-29 00:34:11,288 [     scc.git] DEBUG Check current status
2024-05-29 00:34:11,289 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-29 00:34:11,293 [     scc.git] DEBUG 9c94fd493 Bump version: 5.26.0 → 5.26.1.dev0
2024-05-29 00:34:11,293 [     scc.git] DEBUG Calling 'git submodule status'
2024-05-29 00:34:11,341 [  scc.config] DEBUG Found remote.origin.url
2024-05-29 00:34:11,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-05-29 00:34:12,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-29 00:34:12,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-29 00:34:13,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-29 00:34:13,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-29 00:34:13,489 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-29 00:34:13,534 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-29 00:34:13,534 [     scc.git] DEBUG Resetting...
2024-05-29 00:34:13,534 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-05-29 00:34:13,540 [     scc.git] DEBUG HEAD is now at 9963549 merge master -Dorg -Snone
2024-05-29 00:34:13,540 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-05-29 00:34:13,602 [     scc.git] DEBUG Check current status
2024-05-29 00:34:13,602 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-29 00:34:13,607 [     scc.git] DEBUG 9963549 merge master -Dorg -Snone
2024-05-29 00:34:13,607 [     scc.git] DEBUG Calling 'git submodule status'
2024-05-29 00:34:13,654 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-05-29 00:34:13,657 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-05-29 00:34:13,661 [     scc.git] DEBUG  53a327b85034cf09ae5e7255e6fd70b59392b680 omero-py (v5.19.2-5-g53a327b8)
2024-05-29 00:34:13,666 [     scc.git] DEBUG  5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-05-29 00:34:13,670 [     scc.git] DEBUG  9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493)
2024-05-29 00:34:13,671 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-05-29 00:34:13,671 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-05-29 00:34:13,671 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-05-29 00:34:13,671 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-05-29 00:34:13,671 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-05-29 00:34:13,671 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2024-05-29 00:34:13,671 [    scc.repo] DEBUG ## PRs found:
2024-05-29 00:34:13,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-05-29 00:34:13,925 [    scc.repo] DEBUG ## Branches found:
2024-05-29 00:34:13,926 [     scc.git] DEBUG Get sha1 of %s
2024-05-29 00:34:13,926 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:34:13,930 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-29 00:34:13,935 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-29 00:34:13,935 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-29 00:34:13,940 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-29 00:34:13,945 [     scc.git] DEBUG Already up to date.

2024-05-29 00:34:13,946 [     scc.git] DEBUG ## Unique users: []
2024-05-29 00:34:13,946 [     scc.git] DEBUG Get sha1 of %s
2024-05-29 00:34:13,946 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:34:13,952 [     scc.git] DEBUG Calling 'git submodule update'
2024-05-29 00:34:13,995 [     scc.git] DEBUG Get sha1 of %s
2024-05-29 00:34:13,995 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:34:14,000 [    scc.repo] DEBUG ## PRs found:
2024-05-29 00:34:14,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-05-29 00:34:14,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-05-29 00:34:15,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-05-29 00:34:15,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-05-29 00:34:16,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-29 00:34:16,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-05-29 00:34:17,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-05-29 00:34:17,314 [    scc.repo] DEBUG   - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-05-29 00:34:17,314 [    scc.repo] DEBUG ## Branches found:
2024-05-29 00:34:17,314 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-05-29 00:34:17,314 [     scc.git] DEBUG Get sha1 of %s
2024-05-29 00:34:17,314 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:34:17,319 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-29 00:34:17,323 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-29 00:34:17,324 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-29 00:34:17,328 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-29 00:34:17,332 [     scc.git] DEBUG Already up to date.

2024-05-29 00:34:17,332 [     scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-05-29 00:34:17,720 [     scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-05-29 00:34:17,720 [     scc.git] DEBUG  * branch            refs/pull/16/head -> FETCH_HEAD
2024-05-29 00:34:17,727 [     scc.git] DEBUG ## Unique users: []
2024-05-29 00:34:17,727 [     scc.git] DEBUG Get sha1 of %s
2024-05-29 00:34:17,727 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:34:17,732 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-05-29 00:34:17,737 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:34:17,741 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-05-29 00:34:17,805 [     scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-05-29 00:34:17,806 [     scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-05-29 00:34:17,806 [     scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-05-29 00:34:17,806 [     scc.git] DEBUG Auto-merging src/fsLists.py
2024-05-29 00:34:17,806 [     scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-05-29 00:34:17,806 [     scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-05-29 00:34:17,806 [     scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-05-29 00:34:17,806 [     scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-05-29 00:34:17,806 [     scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-05-29 00:34:17,807 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-29 00:34:17,811 [     scc.git] DEBUG  src/fsAbstractPlatformMonitor.py |  6 +++---
2024-05-29 00:34:17,811 [     scc.git] DEBUG  src/fsDirectory.py               | 46 ++++++++++++++++++++--------------------
2024-05-29 00:34:17,811 [     scc.git] DEBUG  src/fsDropBox.py                 | 24 ++++++++++-----------
2024-05-29 00:34:17,811 [     scc.git] DEBUG  src/fsLists.py                   | 14 ++++++------
2024-05-29 00:34:17,811 [     scc.git] DEBUG  src/fsMac-10-5-Monitor.py        | 10 ++++-----
2024-05-29 00:34:17,811 [     scc.git] DEBUG  src/fsMonitor.py                 | 24 ++++++++++-----------
2024-05-29 00:34:17,811 [     scc.git] DEBUG  src/fsMonitorServer.py           | 10 ++++-----
2024-05-29 00:34:17,813 [     scc.git] DEBUG  src/fsPyinotifyMonitor.py        |  8 +++----
2024-05-29 00:34:17,813 [     scc.git] DEBUG  src/fsWin-XP-Monitor.py          | 20 ++++++++---------
2024-05-29 00:34:17,813 [     scc.git] DEBUG  9 files changed, 81 insertions(+), 81 deletions(-)
2024-05-29 00:34:17,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-29 00:34:17,985 [     scc.git] DEBUG Calling 'git submodule update'
2024-05-29 00:34:18,026 [     scc.git] DEBUG Get sha1 of %s
2024-05-29 00:34:18,026 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:34:18,031 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-29 00:34:18,073 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-05-29 00:34:18,080 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f5544d0b790> has no local changes
2024-05-29 00:34:18,081 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-dropbox
Already up to date.

Merged PRs:
  - PR 16 joshmoore 'Review all instances of whitelist/blacklist'

Generated by OMERO-python-superbuild-push#76 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/76/)'
2024-05-29 00:34:18,092 [     scc.git] DEBUG [detached HEAD d84dcdc] merge master -Dorg -Ssuccess-only
2024-05-29 00:34:18,093 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-29 00:34:18,093 [    scc.repo] DEBUG ## PRs found:
2024-05-29 00:34:18,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-05-29 00:34:18,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-05-29 00:34:19,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-05-29 00:34:19,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-05-29 00:34:20,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-29 00:34:20,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-29 00:34:21,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-05-29 00:34:21,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-05-29 00:34:21,801 [    scc.repo] DEBUG   - PR 69 will-moore 'Roi encoder allows Shape None'
2024-05-29 00:34:22,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-05-29 00:34:22,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-05-29 00:34:23,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-05-29 00:34:23,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-05-29 00:34:23,667 [    scc.repo] DEBUG ## Branches found:
2024-05-29 00:34:23,667 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-05-29 00:34:23,667 [     scc.git] DEBUG Get sha1 of %s
2024-05-29 00:34:23,667 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:34:23,671 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-29 00:34:23,676 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-29 00:34:23,676 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-29 00:34:23,681 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-29 00:34:23,686 [     scc.git] DEBUG Already up to date.

2024-05-29 00:34:23,686 [     scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-05-29 00:34:24,155 [     scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-05-29 00:34:24,155 [     scc.git] DEBUG  * branch            refs/pull/69/head -> FETCH_HEAD
2024-05-29 00:34:24,159 [     scc.git] DEBUG ## Unique users: []
2024-05-29 00:34:24,159 [     scc.git] DEBUG Get sha1 of %s
2024-05-29 00:34:24,159 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:34:24,164 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-05-29 00:34:24,169 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:34:24,175 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-05-29 00:34:24,200 [     scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-05-29 00:34:24,202 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-29 00:34:24,206 [     scc.git] DEBUG  omero_marshal/encode/encoders/roi.py | 5 +++--
2024-05-29 00:34:24,206 [     scc.git] DEBUG  tests/unit/conftest.py               | 5 ++++-
2024-05-29 00:34:24,206 [     scc.git] DEBUG  2 files changed, 7 insertions(+), 3 deletions(-)
2024-05-29 00:34:24,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-29 00:34:24,363 [     scc.git] DEBUG Calling 'git submodule update'
2024-05-29 00:34:24,407 [     scc.git] DEBUG Get sha1 of %s
2024-05-29 00:34:24,407 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:34:24,412 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-29 00:34:24,457 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-05-29 00:34:24,463 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f5544c9fa90> has no local changes
2024-05-29 00:34:24,463 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-marshal
Excluded PRs:
  - PR 34 chris-allan 'Initial support for Event' (exclude comment)
  - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.

Merged PRs:
  - PR 69 will-moore 'Roi encoder allows Shape None'

Generated by OMERO-python-superbuild-push#76 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/76/)'
2024-05-29 00:34:24,472 [     scc.git] DEBUG [detached HEAD b2a4c3d] merge master -Dorg -Ssuccess-only
2024-05-29 00:34:24,473 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-29 00:34:24,473 [    scc.repo] DEBUG ## PRs found:
2024-05-29 00:34:25,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-05-29 00:34:25,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-05-29 00:34:26,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-05-29 00:34:26,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-05-29 00:34:27,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-29 00:34:27,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-29 00:34:28,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-05-29 00:34:28,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-05-29 00:34:28,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-05-29 00:34:29,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-05-29 00:34:29,437 [    scc.repo] DEBUG   - PR 408 jburel 'remove deprecated method'
2024-05-29 00:34:29,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-05-29 00:34:30,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-05-29 00:34:30,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-05-29 00:34:31,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-29 00:34:31,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-29 00:34:32,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-05-29 00:34:32,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-05-29 00:34:33,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-29 00:34:33,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-29 00:34:34,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-05-29 00:34:34,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-05-29 00:34:35,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-05-29 00:34:35,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-05-29 00:34:35,668 [    scc.repo] DEBUG   - PR 391 joshmoore 'Add jstack command'
2024-05-29 00:34:36,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-05-29 00:34:36,125 [    scc.repo] DEBUG   # ... Exclude label: exclude
2024-05-29 00:34:36,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378 HTTP/1.1" 200 None
2024-05-29 00:34:37,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378/comments HTTP/1.1" 200 None
2024-05-29 00:34:37,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-05-29 00:34:38,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-05-29 00:34:38,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-05-29 00:34:39,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-29 00:34:39,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-05-29 00:34:39,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-05-29 00:34:39,849 [    scc.repo] DEBUG   - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-05-29 00:34:40,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-05-29 00:34:40,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-05-29 00:34:41,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-05-29 00:34:41,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-29 00:34:42,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-29 00:34:42,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-05-29 00:34:43,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-05-29 00:34:43,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-05-29 00:34:44,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-05-29 00:34:44,125 [    scc.repo] DEBUG   - PR 332 jburel 'Build conda'
2024-05-29 00:34:44,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-05-29 00:34:45,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-05-29 00:34:45,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-05-29 00:34:46,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-05-29 00:34:46,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-05-29 00:34:47,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-29 00:34:47,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-05-29 00:34:47,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-05-29 00:34:47,994 [    scc.repo] DEBUG   - PR 299 joshmoore 'Add parents and children to omero obj'
2024-05-29 00:34:48,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-05-29 00:34:48,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-05-29 00:34:49,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-29 00:34:49,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-05-29 00:34:50,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-05-29 00:34:50,321 [    scc.repo] DEBUG   - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-05-29 00:34:50,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-05-29 00:34:51,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-05-29 00:34:51,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-05-29 00:34:52,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-29 00:34:52,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-05-29 00:34:53,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-05-29 00:34:53,202 [    scc.repo] DEBUG   - PR 207 manics 'BlitzGateway.connect raise on error'
2024-05-29 00:34:53,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-05-29 00:34:54,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-05-29 00:34:54,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-05-29 00:34:55,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-29 00:34:55,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-05-29 00:34:56,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-05-29 00:34:56,027 [    scc.repo] DEBUG   - PR 199 joshmoore 'user: allow setting default group'
2024-05-29 00:34:56,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-05-29 00:34:56,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-05-29 00:34:57,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-05-29 00:34:57,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-05-29 00:34:57,891 [    scc.repo] DEBUG ## Branches found:
2024-05-29 00:34:57,891 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-05-29 00:34:57,892 [     scc.git] DEBUG Get sha1 of %s
2024-05-29 00:34:57,892 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:34:57,896 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-29 00:34:57,900 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-29 00:34:57,901 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-29 00:34:57,906 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-29 00:34:57,911 [     scc.git] DEBUG Already up to date.

2024-05-29 00:34:57,911 [     scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-05-29 00:34:58,405 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-29 00:34:58,405 [     scc.git] DEBUG  * branch              refs/pull/199/head -> FETCH_HEAD
2024-05-29 00:34:58,411 [     scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-05-29 00:34:58,821 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-29 00:34:58,821 [     scc.git] DEBUG  * branch              refs/pull/207/head -> FETCH_HEAD
2024-05-29 00:34:58,827 [     scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-05-29 00:34:59,243 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-29 00:34:59,244 [     scc.git] DEBUG  * branch              refs/pull/266/head -> FETCH_HEAD
2024-05-29 00:34:59,249 [     scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-05-29 00:34:59,649 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-29 00:34:59,649 [     scc.git] DEBUG  * branch              refs/pull/299/head -> FETCH_HEAD
2024-05-29 00:34:59,654 [     scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-05-29 00:35:00,095 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-29 00:35:00,096 [     scc.git] DEBUG  * branch              refs/pull/332/head -> FETCH_HEAD
2024-05-29 00:35:00,100 [     scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-05-29 00:35:00,483 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-29 00:35:00,483 [     scc.git] DEBUG  * branch              refs/pull/337/head -> FETCH_HEAD
2024-05-29 00:35:00,487 [     scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-05-29 00:35:00,872 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-29 00:35:00,872 [     scc.git] DEBUG  * branch              refs/pull/391/head -> FETCH_HEAD
2024-05-29 00:35:00,877 [     scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-05-29 00:35:01,326 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-29 00:35:01,326 [     scc.git] DEBUG  * branch              refs/pull/408/head -> FETCH_HEAD
2024-05-29 00:35:01,331 [     scc.git] DEBUG ## Unique users: []
2024-05-29 00:35:01,331 [     scc.git] DEBUG Get sha1 of %s
2024-05-29 00:35:01,331 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:35:01,336 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-05-29 00:35:01,349 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:35:01,354 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-05-29 00:35:01,419 [     scc.git] DEBUG Auto-merging src/omero/cli.py
2024-05-29 00:35:01,419 [     scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-05-29 00:35:01,420 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-29 00:35:01,424 [     scc.git] DEBUG  src/omero/cli.py          |  6 ++++++
2024-05-29 00:35:01,424 [     scc.git] DEBUG  src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-05-29 00:35:01,424 [     scc.git] DEBUG  2 files changed, 39 insertions(+), 3 deletions(-)
2024-05-29 00:35:01,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-29 00:35:01,590 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-05-29 00:35:01,601 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:35:01,606 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-05-29 00:35:01,706 [     scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-05-29 00:35:01,707 [     scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-05-29 00:35:01,708 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-29 00:35:01,717 [     scc.git] DEBUG  src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-05-29 00:35:01,717 [     scc.git] DEBUG  test/unit/test_gateway.py     | 16 ++++++++++++++++
2024-05-29 00:35:01,717 [     scc.git] DEBUG  2 files changed, 29 insertions(+), 6 deletions(-)
2024-05-29 00:35:02,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-29 00:35:02,013 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-05-29 00:35:02,024 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:35:02,028 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-05-29 00:35:02,120 [     scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-05-29 00:35:02,121 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-29 00:35:02,124 [     scc.git] DEBUG  src/omero/plugins/search.py | 13 +++++++++----
2024-05-29 00:35:02,125 [     scc.git] DEBUG  1 file changed, 9 insertions(+), 4 deletions(-)
2024-05-29 00:35:02,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-29 00:35:02,423 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-05-29 00:35:02,434 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:35:02,439 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-05-29 00:35:02,527 [     scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-05-29 00:35:02,528 [     scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-05-29 00:35:02,532 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-29 00:35:02,543 [     scc.git] DEBUG  src/omero/plugins/obj.py      | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-05-29 00:35:02,543 [     scc.git] DEBUG  test/unit/clitest/test_obj.py |  2 +-
2024-05-29 00:35:02,543 [     scc.git] DEBUG  2 files changed, 69 insertions(+), 2 deletions(-)
2024-05-29 00:35:02,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-29 00:35:02,839 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-05-29 00:35:02,850 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:35:02,854 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-05-29 00:35:02,881 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-29 00:35:02,883 [     scc.git] DEBUG  .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-05-29 00:35:02,883 [     scc.git] DEBUG  connect.py                    | 11 +++++++++++
2024-05-29 00:35:02,884 [     scc.git] DEBUG  2 files changed, 48 insertions(+)
2024-05-29 00:35:02,884 [     scc.git] DEBUG  create mode 100644 .github/workflows/install.yml
2024-05-29 00:35:02,884 [     scc.git] DEBUG  create mode 100644 connect.py
2024-05-29 00:35:03,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-29 00:35:03,255 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-05-29 00:35:03,267 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:35:03,272 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-05-29 00:35:03,328 [     scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-05-29 00:35:03,329 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-29 00:35:03,332 [     scc.git] DEBUG  src/omero/plugins/import.py | 2 ++
2024-05-29 00:35:03,333 [     scc.git] DEBUG  1 file changed, 2 insertions(+)
2024-05-29 00:35:03,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-29 00:35:03,676 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-05-29 00:35:03,687 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:35:03,691 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-05-29 00:35:03,764 [     scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-05-29 00:35:03,766 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-29 00:35:03,769 [     scc.git] DEBUG  src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-05-29 00:35:03,769 [     scc.git] DEBUG  1 file changed, 59 insertions(+), 2 deletions(-)
2024-05-29 00:35:04,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-29 00:35:04,092 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-05-29 00:35:04,105 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:35:04,110 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-05-29 00:35:04,153 [     scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-05-29 00:35:04,153 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-29 00:35:04,161 [     scc.git] DEBUG  src/omero/gateway/__init__.py | 36 ------------------------------------
2024-05-29 00:35:04,161 [     scc.git] DEBUG  1 file changed, 36 deletions(-)
2024-05-29 00:35:04,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-29 00:35:04,549 [     scc.git] DEBUG Calling 'git submodule update'
2024-05-29 00:35:04,593 [     scc.git] DEBUG Get sha1 of %s
2024-05-29 00:35:04,594 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:35:04,599 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-29 00:35:04,644 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-05-29 00:35:04,653 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f5544d0b9a0> has no local changes
2024-05-29 00:35:04,653 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-py
Excluded PRs:
  - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
  - PR 387 will-moore 'Numpy pixels type' (label: exclude)
  - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
  - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
  - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
  - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.

Merged PRs:
  - PR 199 joshmoore 'user: allow setting default group'
  - PR 207 manics 'BlitzGateway.connect raise on error'
  - PR 266 joshmoore 'errors: use raise_error from cli plugins'
  - PR 299 joshmoore 'Add parents and children to omero obj'
  - PR 332 jburel 'Build conda'
  - PR 337 will-moore 'bulk.yml depth is passed to xargs'
  - PR 391 joshmoore 'Add jstack command'
  - PR 408 jburel 'remove deprecated method'

Generated by OMERO-python-superbuild-push#76 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/76/)'
2024-05-29 00:35:04,665 [     scc.git] DEBUG [detached HEAD fffa1e62] merge master -Dorg -Ssuccess-only
2024-05-29 00:35:04,665 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-29 00:35:04,665 [     scc.git] INFO  Overriding base-branch from master to develop
2024-05-29 00:35:04,666 [    scc.repo] DEBUG ## PRs found:
2024-05-29 00:35:05,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-05-29 00:35:05,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-05-29 00:35:06,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-05-29 00:35:06,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-05-29 00:35:07,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-05-29 00:35:07,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-05-29 00:35:08,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-05-29 00:35:08,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-05-29 00:35:09,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-29 00:35:09,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-05-29 00:35:10,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-05-29 00:35:10,099 [    scc.repo] DEBUG   - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-05-29 00:35:10,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-05-29 00:35:11,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-05-29 00:35:11,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-05-29 00:35:12,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-05-29 00:35:12,096 [    scc.repo] DEBUG ## Branches found:
2024-05-29 00:35:12,096 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-05-29 00:35:12,096 [     scc.git] DEBUG Get sha1 of %s
2024-05-29 00:35:12,096 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:35:12,101 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-05-29 00:35:12,105 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-29 00:35:12,105 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-05-29 00:35:12,110 [     scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-05-29 00:35:12,114 [     scc.git] DEBUG Already up to date.

2024-05-29 00:35:12,115 [     scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-05-29 00:35:12,637 [     scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-05-29 00:35:12,637 [     scc.git] DEBUG  * branch            refs/pull/202/head -> FETCH_HEAD
2024-05-29 00:35:12,641 [     scc.git] DEBUG ## Unique users: []
2024-05-29 00:35:12,643 [     scc.git] DEBUG Get sha1 of %s
2024-05-29 00:35:12,643 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:35:12,649 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-05-29 00:35:12,655 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:35:12,660 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-05-29 00:35:12,719 [     scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-05-29 00:35:12,719 [     scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-05-29 00:35:12,719 [     scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-05-29 00:35:12,720 [     scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-05-29 00:35:12,725 [     scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a'
2024-05-29 00:35:12,731 [     scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0
2024-05-29 00:35:12,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-29 00:35:12,887 [     scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-05-29 00:35:12,893 [     scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a'
2024-05-29 00:35:12,898 [     scc.git] INFO    - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#76](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/76/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/76/consoleText) for more details.
Possible conflicts:
  - Upstream changes
    - omero/annotation_scripts/KeyVal_to_csv.py

--conflicts

2024-05-29 00:35:12,903 [  scc.config] DEBUG Found github.token
2024-05-29 00:35:12,904 [     scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-05-29 00:35:12,904 [     scc.git] DEBUG Calling 'git submodule update'
2024-05-29 00:35:12,944 [     scc.git] DEBUG Get sha1 of %s
2024-05-29 00:35:12,945 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:35:12,949 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-29 00:35:12,992 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-05-29 00:35:12,998 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f55444235b0> has no local changes
2024-05-29 00:35:12,999 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-scripts
Excluded PRs:
  - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
  - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
  - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
  - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.

Conflicting PRs (not included):
  - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'

Generated by OMERO-python-superbuild-push#76 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/76/)'
2024-05-29 00:35:13,007 [     scc.git] DEBUG [detached HEAD 2db857c] merge master -Dorg -Ssuccess-only
2024-05-29 00:35:13,008 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-29 00:35:13,008 [    scc.repo] DEBUG ## PRs found:
2024-05-29 00:35:13,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-05-29 00:35:14,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/554 HTTP/1.1" 200 None
2024-05-29 00:35:14,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-05-29 00:35:14,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-05-29 00:35:15,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-05-29 00:35:15,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-05-29 00:35:16,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-29 00:35:16,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-29 00:35:17,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-05-29 00:35:17,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-05-29 00:35:18,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-05-29 00:35:18,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-05-29 00:35:18,839 [    scc.repo] DEBUG   - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-05-29 00:35:19,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-05-29 00:35:19,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-05-29 00:35:20,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-05-29 00:35:20,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-29 00:35:21,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-29 00:35:21,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-05-29 00:35:22,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-05-29 00:35:22,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-05-29 00:35:23,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-05-29 00:35:23,072 [    scc.repo] DEBUG   - PR 527 will-moore 'Add some initial CSP settings to test'
2024-05-29 00:35:23,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-05-29 00:35:24,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-05-29 00:35:24,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-05-29 00:35:25,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-29 00:35:25,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-29 00:35:25,554 [    scc.repo] DEBUG ## Branches found:
2024-05-29 00:35:25,554 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-05-29 00:35:25,554 [     scc.git] DEBUG Get sha1 of %s
2024-05-29 00:35:25,554 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:35:25,559 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-29 00:35:25,564 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-29 00:35:25,564 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-29 00:35:25,569 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-29 00:35:25,574 [     scc.git] DEBUG Already up to date.

2024-05-29 00:35:25,574 [     scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-05-29 00:35:26,246 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-05-29 00:35:26,247 [     scc.git] DEBUG  * branch                refs/pull/527/head -> FETCH_HEAD
2024-05-29 00:35:26,251 [     scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-05-29 00:35:26,639 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-05-29 00:35:26,639 [     scc.git] DEBUG  * branch                refs/pull/534/head -> FETCH_HEAD
2024-05-29 00:35:26,644 [     scc.git] DEBUG ## Unique users: []
2024-05-29 00:35:26,644 [     scc.git] DEBUG Get sha1 of %s
2024-05-29 00:35:26,644 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:35:26,649 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-05-29 00:35:26,655 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:35:26,659 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-05-29 00:35:26,720 [     scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-05-29 00:35:26,720 [     scc.git] DEBUG Auto-merging setup.py
2024-05-29 00:35:26,722 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-29 00:35:26,725 [     scc.git] DEBUG  omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-05-29 00:35:26,726 [     scc.git] DEBUG  setup.py             |  1 +
2024-05-29 00:35:26,726 [     scc.git] DEBUG  2 files changed, 42 insertions(+), 1 deletion(-)
2024-05-29 00:35:26,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-29 00:35:26,882 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-05-29 00:35:26,888 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:35:26,893 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-05-29 00:35:26,914 [     scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-05-29 00:35:26,914 [     scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-05-29 00:35:26,915 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-29 00:35:26,919 [     scc.git] DEBUG  omeroweb/webclient/webclient_gateway.py | 2 +-
2024-05-29 00:35:26,919 [     scc.git] DEBUG  omeroweb/webgateway/marshal.py          | 4 ++--
2024-05-29 00:35:26,919 [     scc.git] DEBUG  2 files changed, 3 insertions(+), 3 deletions(-)
2024-05-29 00:35:27,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-29 00:35:27,290 [     scc.git] DEBUG Calling 'git submodule update'
2024-05-29 00:35:27,333 [     scc.git] DEBUG Get sha1 of %s
2024-05-29 00:35:27,334 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-29 00:35:27,339 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-29 00:35:27,381 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-05-29 00:35:27,391 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f55443ac130> has no local changes
2024-05-29 00:35:27,391 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-web
Excluded PRs:
  - PR 555 chris-allan 'Archive status' (exclude comment)
  - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft)
  - PR 535 will-moore 'Initial working browser history' (stage: draft)
  - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.

Merged PRs:
  - PR 527 will-moore 'Add some initial CSP settings to test'
  - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'

Generated by OMERO-python-superbuild-push#76 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/76/)'
2024-05-29 00:35:27,402 [     scc.git] DEBUG [detached HEAD 6aa9790e0] merge master -Dorg -Ssuccess-only
2024-05-29 00:35:27,402 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-29 00:35:27,402 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-29 00:35:27,457 [  scc.config] DEBUG Found submodule.omero-dropbox.url
2024-05-29 00:35:27,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-29 00:35:27,720 [  scc.config] DEBUG Found submodule.omero-marshal.url
2024-05-29 00:35:28,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-29 00:35:28,132 [  scc.config] DEBUG Found submodule.omero-py.url
2024-05-29 00:35:28,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-29 00:35:28,534 [  scc.config] DEBUG Found submodule.omero-scripts.url
2024-05-29 00:35:28,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-29 00:35:28,947 [  scc.config] DEBUG Found submodule.omero-web.url
2024-05-29 00:35:29,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-29 00:35:29,362 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-05-29 00:35:29,390 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f5544f5b130> has local changes
2024-05-29 00:35:29,390 [     scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-python-superbuild
Already up to date.


Repository: ome/omero-dropbox
Already up to date.

Merged PRs:
  - PR 16 joshmoore 'Review all instances of whitelist/blacklist'

Repository: ome/omero-marshal
Excluded PRs:
  - PR 34 chris-allan 'Initial support for Event' (exclude comment)
  - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.

Merged PRs:
  - PR 69 will-moore 'Roi encoder allows Shape None'

Repository: ome/omero-py
Excluded PRs:
  - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
  - PR 387 will-moore 'Numpy pixels type' (label: exclude)
  - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
  - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
  - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
  - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.

Merged PRs:
  - PR 199 joshmoore 'user: allow setting default group'
  - PR 207 manics 'BlitzGateway.connect raise on error'
  - PR 266 joshmoore 'errors: use raise_error from cli plugins'
  - PR 299 joshmoore 'Add parents and children to omero obj'
  - PR 332 jburel 'Build conda'
  - PR 337 will-moore 'bulk.yml depth is passed to xargs'
  - PR 391 joshmoore 'Add jstack command'
  - PR 408 jburel 'remove deprecated method'

Repository: ome/omero-scripts
Excluded PRs:
  - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
  - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
  - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
  - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.

Conflicting PRs (not included):
  - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'

Repository: ome/omero-web
Excluded PRs:
  - PR 555 chris-allan 'Archive status' (exclude comment)
  - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft)
  - PR 535 will-moore 'Initial working browser history' (stage: draft)
  - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.

Merged PRs:
  - PR 527 will-moore 'Add some initial CSP settings to test'
  - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'

Generated by OMERO-python-superbuild-push#76 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/76/)'
2024-05-29 00:35:29,400 [     scc.git] DEBUG [detached HEAD baa55c3] merge master -Dorg -Ssuccess-only
2024-05-29 00:35:29,400 [   scc.merge] INFO  Repository: ome/omero-python-superbuild
2024-05-29 00:35:29,400 [     scc.git] DEBUG  6 files changed, 10 insertions(+), 10 deletions(-)
2024-05-29 00:35:29,400 [   scc.merge] INFO  Already up to date.
2024-05-29 00:35:29,400 [   scc.merge] INFO  
2024-05-29 00:35:29,400 [   scc.merge] INFO  
2024-05-29 00:35:29,401 [   scc.merge] INFO  Repository: ome/omero-dropbox
2024-05-29 00:35:29,401 [   scc.merge] INFO  Already up to date.
2024-05-29 00:35:29,401 [   scc.merge] INFO  
2024-05-29 00:35:29,401 [   scc.merge] INFO  Merged PRs:
2024-05-29 00:35:29,401 [   scc.merge] INFO    - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-05-29 00:35:29,401 [   scc.merge] INFO  
2024-05-29 00:35:29,401 [   scc.merge] INFO  Repository: ome/omero-marshal
2024-05-29 00:35:29,401 [   scc.merge] INFO  Excluded PRs:
2024-05-29 00:35:29,401 [   scc.merge] INFO    - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-05-29 00:35:29,401 [   scc.merge] INFO    - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-05-29 00:35:29,401 [   scc.merge] INFO  Already up to date.
2024-05-29 00:35:29,401 [   scc.merge] INFO  
2024-05-29 00:35:29,401 [   scc.merge] INFO  Merged PRs:
2024-05-29 00:35:29,401 [   scc.merge] INFO    - PR 69 will-moore 'Roi encoder allows Shape None'
2024-05-29 00:35:29,401 [   scc.merge] INFO  
2024-05-29 00:35:29,401 [   scc.merge] INFO  Repository: ome/omero-py
2024-05-29 00:35:29,401 [   scc.merge] INFO  Excluded PRs:
2024-05-29 00:35:29,401 [   scc.merge] INFO    - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-05-29 00:35:29,401 [   scc.merge] INFO    - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-05-29 00:35:29,401 [   scc.merge] INFO    - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
2024-05-29 00:35:29,401 [   scc.merge] INFO    - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-05-29 00:35:29,401 [   scc.merge] INFO    - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-05-29 00:35:29,401 [   scc.merge] INFO    - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-05-29 00:35:29,401 [   scc.merge] INFO  Already up to date.
2024-05-29 00:35:29,401 [   scc.merge] INFO  
2024-05-29 00:35:29,401 [   scc.merge] INFO  Merged PRs:
2024-05-29 00:35:29,401 [   scc.merge] INFO    - PR 199 joshmoore 'user: allow setting default group'
2024-05-29 00:35:29,401 [   scc.merge] INFO    - PR 207 manics 'BlitzGateway.connect raise on error'
2024-05-29 00:35:29,401 [   scc.merge] INFO    - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-05-29 00:35:29,401 [   scc.merge] INFO    - PR 299 joshmoore 'Add parents and children to omero obj'
2024-05-29 00:35:29,401 [   scc.merge] INFO    - PR 332 jburel 'Build conda'
2024-05-29 00:35:29,401 [   scc.merge] INFO    - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-05-29 00:35:29,401 [   scc.merge] INFO    - PR 391 joshmoore 'Add jstack command'
2024-05-29 00:35:29,401 [   scc.merge] INFO    - PR 408 jburel 'remove deprecated method'
2024-05-29 00:35:29,401 [   scc.merge] INFO  
2024-05-29 00:35:29,401 [   scc.merge] INFO  Repository: ome/omero-scripts
2024-05-29 00:35:29,401 [   scc.merge] INFO  Excluded PRs:
2024-05-29 00:35:29,402 [   scc.merge] INFO    - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-05-29 00:35:29,402 [   scc.merge] INFO    - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-05-29 00:35:29,402 [   scc.merge] INFO    - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-05-29 00:35:29,402 [   scc.merge] INFO    - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-05-29 00:35:29,402 [   scc.merge] INFO  Already up to date.
2024-05-29 00:35:29,402 [   scc.merge] INFO  
2024-05-29 00:35:29,402 [   scc.merge] INFO  Conflicting PRs (not included):
2024-05-29 00:35:29,402 [   scc.merge] INFO    - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-05-29 00:35:29,402 [   scc.merge] INFO  
2024-05-29 00:35:29,402 [   scc.merge] INFO  Repository: ome/omero-web
2024-05-29 00:35:29,402 [   scc.merge] INFO  Excluded PRs:
2024-05-29 00:35:29,402 [   scc.merge] INFO    - PR 555 chris-allan 'Archive status' (exclude comment)
2024-05-29 00:35:29,402 [   scc.merge] INFO    - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft)
2024-05-29 00:35:29,402 [   scc.merge] INFO    - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-05-29 00:35:29,402 [   scc.merge] INFO    - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-05-29 00:35:29,402 [   scc.merge] INFO  Already up to date.
2024-05-29 00:35:29,402 [   scc.merge] INFO  
2024-05-29 00:35:29,402 [   scc.merge] INFO  Merged PRs:
2024-05-29 00:35:29,402 [   scc.merge] INFO    - PR 527 will-moore 'Add some initial CSP settings to test'
2024-05-29 00:35:29,402 [   scc.merge] INFO    - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-05-29 00:35:29,402 [   scc.merge] INFO  
2024-05-29 00:35:29,402 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-05-29 00:35:29,402 [     scc.git] DEBUG Calling 'git remote'
2024-05-29 00:35:29,407 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-05-29 00:35:29,407 [     scc.git] DEBUG Calling 'git remote'
2024-05-29 00:35:29,412 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-29 00:35:29,412 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-05-29 00:35:29,412 [     scc.git] DEBUG Calling 'git remote'
2024-05-29 00:35:29,416 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-29 00:35:29,416 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-05-29 00:35:29,417 [     scc.git] DEBUG Calling 'git remote'
2024-05-29 00:35:29,421 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-29 00:35:29,421 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-05-29 00:35:29,421 [     scc.git] DEBUG Calling 'git remote'
2024-05-29 00:35:29,425 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-29 00:35:29,426 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-05-29 00:35:29,426 [     scc.git] DEBUG Calling 'git remote'
2024-05-29 00:35:29,430 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
    download_blitz_target()
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
    resp = urlopen(loc)
  File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
    return opener.open(url, data, timeout)
  File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
    response = meth(req, response)
  File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
    response = self.parent.error(
  File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
    return self._call_chain(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
    result = func(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
    raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
    download_blitz_target()
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
    resp = urlopen(loc)
  File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
    return opener.open(url, data, timeout)
  File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
    response = meth(req, response)
  File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
    response = self.parent.error(
  File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
    return self._call_chain(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
    result = func(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
    raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 53a327b8
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 5a90893
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 9c94fd493
nothing to commit, working tree clean
HEAD detached from c5de36a
nothing to commit, working tree clean
2024-05-29 00:35:59,617 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci