![[Jenkins]](/jenkins/static/f6f303f9/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 101 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 05f561e50be2431cd9410d50001265d0083e357b (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 05f561e50be2431cd9410d50001265d0083e357b # timeout=10 Commit message: "Merge pull request #282 from ome/dependabot/submodules/omero-py-d3a6542" > git rev-list --no-walk 05f561e50be2431cd9410d50001265d0083e357b # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 90 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3 -m venv build/venv > git submodule update --init --recursive omero-scripts # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.6.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.6.2-py3-none-any.whl (164 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl (3.9 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.6.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.8 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-06-12 00:34:44,473 [ scc.config] DEBUG Found github.token 2024-06-12 00:34:44,475 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-06-12 00:34:44,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:34:45,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:34:45,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-06-12 00:34:45,510 [ scc.gh] DEBUG 4294 remaining from 5000 (Reset at 00:06 2024-06-12 00:34:45,511 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-12 00:34:45,516 [ scc.git] DEBUG Check current status 2024-06-12 00:34:45,516 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-12 00:34:45,521 [ scc.git] DEBUG 05f561e Merge pull request #282 from ome/dependabot/submodules/omero-py-d3a6542 2024-06-12 00:34:45,522 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-12 00:34:45,565 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-06-12 00:34:45,568 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-06-12 00:34:45,688 [ scc.git] DEBUG d3a65421944d94d69c3d8aa63ebdebed8f4ddb29 omero-py (v5.19.2-10-gd3a65421) 2024-06-12 00:34:45,692 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893) 2024-06-12 00:34:45,695 [ scc.git] DEBUG 9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493) 2024-06-12 00:34:45,699 [ scc.config] DEBUG Found remote.origin.url 2024-06-12 00:34:46,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-06-12 00:34:46,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-12 00:34:46,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-12 00:34:47,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-12 00:34:47,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-12 00:34:47,718 [ scc.git] DEBUG Resetting... 2024-06-12 00:34:47,719 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-06-12 00:34:47,727 [ scc.git] DEBUG HEAD is now at 05f561e Merge pull request #282 from ome/dependabot/submodules/omero-py-d3a6542 2024-06-12 00:34:47,727 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-06-12 00:34:47,793 [ scc.git] DEBUG Check current status 2024-06-12 00:34:47,794 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-12 00:34:47,800 [ scc.git] DEBUG 05f561e Merge pull request #282 from ome/dependabot/submodules/omero-py-d3a6542 2024-06-12 00:34:47,800 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-12 00:34:47,849 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-06-12 00:34:47,852 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-06-12 00:34:47,857 [ scc.git] DEBUG d3a65421944d94d69c3d8aa63ebdebed8f4ddb29 omero-py (v5.19.2-10-gd3a65421) 2024-06-12 00:34:47,862 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893) 2024-06-12 00:34:47,865 [ scc.git] DEBUG 9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493) 2024-06-12 00:34:47,867 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-06-12 00:34:47,867 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-06-12 00:34:47,867 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-06-12 00:34:47,867 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-06-12 00:34:47,867 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-06-12 00:34:47,867 [ scc.repo] DEBUG ## PRs found: 2024-06-12 00:34:48,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2024-06-12 00:34:48,175 [ scc.repo] DEBUG ## Branches found: 2024-06-12 00:34:48,175 [ scc.git] DEBUG Get sha1 of %s 2024-06-12 00:34:48,176 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:34:48,181 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-12 00:34:48,187 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-12 00:34:48,187 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-12 00:34:48,193 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-12 00:34:48,199 [ scc.git] DEBUG Already up to date. 2024-06-12 00:34:48,200 [ scc.git] DEBUG ## Unique users: [] 2024-06-12 00:34:48,200 [ scc.git] DEBUG Get sha1 of %s 2024-06-12 00:34:48,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:34:48,206 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-12 00:34:48,256 [ scc.git] DEBUG Get sha1 of %s 2024-06-12 00:34:48,256 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:34:48,263 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-12 00:34:48,432 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1a1290ec40> has no local changes 2024-06-12 00:34:48,433 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#88 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/88/)' 2024-06-12 00:34:48,465 [ scc.git] DEBUG [detached HEAD 141163b] merge master -Dorg -Snone 2024-06-12 00:34:48,465 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-06-12 00:34:48,465 [ scc.merge] INFO Already up to date. 2024-06-12 00:34:48,465 [ scc.merge] INFO 2024-06-12 00:34:48,465 [ scc.merge] INFO 2024-06-12 00:34:48,465 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-06-12 00:34:48,466 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-06-12 00:34:51,009 [ scc.config] DEBUG Found github.token 2024-06-12 00:34:51,013 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-06-12 00:34:51,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:34:51,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:34:52,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-06-12 00:34:52,032 [ scc.gh] DEBUG 4286 remaining from 5000 (Reset at 00:06 2024-06-12 00:34:52,033 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-12 00:34:52,036 [ scc.git] DEBUG Check current status 2024-06-12 00:34:52,037 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-12 00:34:52,040 [ scc.git] DEBUG 141163b merge master -Dorg -Snone 2024-06-12 00:34:52,041 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-12 00:34:52,079 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-06-12 00:34:52,082 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-06-12 00:34:52,085 [ scc.git] DEBUG d3a65421944d94d69c3d8aa63ebdebed8f4ddb29 omero-py (v5.19.2-10-gd3a65421) 2024-06-12 00:34:52,089 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893) 2024-06-12 00:34:52,092 [ scc.git] DEBUG 9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493) 2024-06-12 00:34:52,097 [ scc.config] DEBUG Found remote.origin.url 2024-06-12 00:34:52,097 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-06-12 00:34:52,099 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-06-12 00:34:52,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-06-12 00:34:52,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-12 00:34:53,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-12 00:34:53,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-12 00:34:54,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-12 00:34:54,200 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-12 00:34:54,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-06-12 00:34:54,249 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-12 00:34:54,254 [ scc.git] DEBUG Check current status 2024-06-12 00:34:54,254 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-12 00:34:54,258 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0 2024-06-12 00:34:54,258 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-12 00:34:54,302 [ scc.config] DEBUG Found remote.origin.url 2024-06-12 00:34:54,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2024-06-12 00:34:55,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-12 00:34:55,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-12 00:34:56,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-12 00:34:56,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-12 00:34:56,579 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-12 00:34:56,615 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-12 00:34:56,616 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-06-12 00:34:56,616 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-12 00:34:56,619 [ scc.git] DEBUG Check current status 2024-06-12 00:34:56,619 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-12 00:34:56,623 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312 2024-06-12 00:34:56,623 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-12 00:34:56,662 [ scc.config] DEBUG Found remote.origin.url 2024-06-12 00:34:57,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2024-06-12 00:34:57,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-12 00:34:57,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-12 00:34:58,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-12 00:34:58,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-12 00:34:58,757 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-12 00:34:58,812 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-12 00:34:58,813 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-06-12 00:34:58,813 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-12 00:34:58,817 [ scc.git] DEBUG Check current status 2024-06-12 00:34:58,817 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-12 00:34:58,821 [ scc.git] DEBUG d3a65421 Merge pull request #410 from jburel/python_wheel 2024-06-12 00:34:58,822 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-12 00:34:58,872 [ scc.config] DEBUG Found remote.origin.url 2024-06-12 00:34:59,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2024-06-12 00:34:59,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-12 00:35:00,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-12 00:35:00,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-12 00:35:00,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-12 00:35:00,986 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-12 00:35:01,029 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-12 00:35:01,030 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-06-12 00:35:01,030 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-12 00:35:01,033 [ scc.git] DEBUG Check current status 2024-06-12 00:35:01,033 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-12 00:35:01,037 [ scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-06-12 00:35:01,037 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-12 00:35:01,077 [ scc.config] DEBUG Found remote.origin.url 2024-06-12 00:35:01,078 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-06-12 00:35:01,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2024-06-12 00:35:02,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-12 00:35:02,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-12 00:35:02,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-12 00:35:03,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-12 00:35:03,309 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-12 00:35:03,347 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-12 00:35:03,347 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-06-12 00:35:03,347 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-12 00:35:03,351 [ scc.git] DEBUG Check current status 2024-06-12 00:35:03,351 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-12 00:35:03,355 [ scc.git] DEBUG 9c94fd493 Bump version: 5.26.0 → 5.26.1.dev0 2024-06-12 00:35:03,355 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-12 00:35:03,396 [ scc.config] DEBUG Found remote.origin.url 2024-06-12 00:35:03,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2024-06-12 00:35:04,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-12 00:35:04,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-12 00:35:05,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-12 00:35:05,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-12 00:35:05,524 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-12 00:35:05,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-12 00:35:05,566 [ scc.git] DEBUG Resetting... 2024-06-12 00:35:05,566 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-06-12 00:35:05,572 [ scc.git] DEBUG HEAD is now at 141163b merge master -Dorg -Snone 2024-06-12 00:35:05,572 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-06-12 00:35:05,624 [ scc.git] DEBUG Check current status 2024-06-12 00:35:05,624 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-12 00:35:05,630 [ scc.git] DEBUG 141163b merge master -Dorg -Snone 2024-06-12 00:35:05,630 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-12 00:35:05,670 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-06-12 00:35:05,673 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-06-12 00:35:05,676 [ scc.git] DEBUG d3a65421944d94d69c3d8aa63ebdebed8f4ddb29 omero-py (v5.19.2-10-gd3a65421) 2024-06-12 00:35:05,680 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893) 2024-06-12 00:35:05,683 [ scc.git] DEBUG 9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493) 2024-06-12 00:35:05,684 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-06-12 00:35:05,684 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-06-12 00:35:05,684 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-06-12 00:35:05,684 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-06-12 00:35:05,684 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-06-12 00:35:05,684 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-06-12 00:35:05,684 [ scc.repo] DEBUG ## PRs found: 2024-06-12 00:35:05,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2024-06-12 00:35:05,954 [ scc.repo] DEBUG ## Branches found: 2024-06-12 00:35:05,955 [ scc.git] DEBUG Get sha1 of %s 2024-06-12 00:35:05,955 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:35:05,964 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-12 00:35:05,969 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-12 00:35:05,969 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-12 00:35:05,974 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-12 00:35:05,978 [ scc.git] DEBUG Already up to date. 2024-06-12 00:35:05,978 [ scc.git] DEBUG ## Unique users: [] 2024-06-12 00:35:05,978 [ scc.git] DEBUG Get sha1 of %s 2024-06-12 00:35:05,978 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:35:05,981 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-12 00:35:06,022 [ scc.git] DEBUG Get sha1 of %s 2024-06-12 00:35:06,023 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:35:06,027 [ scc.repo] DEBUG ## PRs found: 2024-06-12 00:35:06,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2024-06-12 00:35:06,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2024-06-12 00:35:07,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2024-06-12 00:35:07,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-06-12 00:35:08,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-12 00:35:08,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-06-12 00:35:09,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2024-06-12 00:35:09,370 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-06-12 00:35:09,370 [ scc.repo] DEBUG ## Branches found: 2024-06-12 00:35:09,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-06-12 00:35:09,371 [ scc.git] DEBUG Get sha1 of %s 2024-06-12 00:35:09,371 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:35:09,376 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-12 00:35:09,380 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-12 00:35:09,381 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-12 00:35:09,386 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-12 00:35:09,391 [ scc.git] DEBUG Already up to date. 2024-06-12 00:35:09,392 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2024-06-12 00:35:09,797 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2024-06-12 00:35:09,797 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2024-06-12 00:35:09,802 [ scc.git] DEBUG ## Unique users: [] 2024-06-12 00:35:09,802 [ scc.git] DEBUG Get sha1 of %s 2024-06-12 00:35:09,802 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:35:09,806 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-06-12 00:35:09,811 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:35:09,814 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-06-12 00:35:09,847 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2024-06-12 00:35:09,847 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2024-06-12 00:35:09,848 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2024-06-12 00:35:09,848 [ scc.git] DEBUG Auto-merging src/fsLists.py 2024-06-12 00:35:09,848 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2024-06-12 00:35:09,848 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2024-06-12 00:35:09,848 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2024-06-12 00:35:09,848 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2024-06-12 00:35:09,848 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2024-06-12 00:35:09,849 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-12 00:35:09,852 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2024-06-12 00:35:09,852 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2024-06-12 00:35:09,852 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2024-06-12 00:35:09,852 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2024-06-12 00:35:09,853 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2024-06-12 00:35:09,853 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2024-06-12 00:35:09,853 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2024-06-12 00:35:09,853 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2024-06-12 00:35:09,855 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2024-06-12 00:35:09,855 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2024-06-12 00:35:10,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:35:10,037 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-12 00:35:10,075 [ scc.git] DEBUG Get sha1 of %s 2024-06-12 00:35:10,076 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:35:10,080 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-12 00:35:10,118 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-12 00:35:10,125 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8492c61d60> has no local changes 2024-06-12 00:35:10,126 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#88 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/88/)' 2024-06-12 00:35:10,134 [ scc.git] DEBUG [detached HEAD 35dd521] merge master -Dorg -Ssuccess-only 2024-06-12 00:35:10,134 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-12 00:35:10,135 [ scc.repo] DEBUG ## PRs found: 2024-06-12 00:35:10,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2024-06-12 00:35:11,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2024-06-12 00:35:11,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2024-06-12 00:35:11,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-06-12 00:35:12,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-12 00:35:12,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-12 00:35:13,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-06-12 00:35:13,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2024-06-12 00:35:13,890 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2024-06-12 00:35:14,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2024-06-12 00:35:14,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2024-06-12 00:35:15,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2024-06-12 00:35:15,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2024-06-12 00:35:15,816 [ scc.repo] DEBUG ## Branches found: 2024-06-12 00:35:15,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-06-12 00:35:15,817 [ scc.git] DEBUG Get sha1 of %s 2024-06-12 00:35:15,817 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:35:15,821 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-12 00:35:15,825 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-12 00:35:15,825 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-12 00:35:15,830 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-12 00:35:15,835 [ scc.git] DEBUG Already up to date. 2024-06-12 00:35:15,835 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2024-06-12 00:35:16,273 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2024-06-12 00:35:16,273 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2024-06-12 00:35:16,277 [ scc.git] DEBUG ## Unique users: [] 2024-06-12 00:35:16,277 [ scc.git] DEBUG Get sha1 of %s 2024-06-12 00:35:16,277 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:35:16,281 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-06-12 00:35:16,285 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:35:16,289 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-06-12 00:35:16,298 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2024-06-12 00:35:16,299 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-12 00:35:16,301 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2024-06-12 00:35:16,301 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2024-06-12 00:35:16,302 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2024-06-12 00:35:16,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:35:16,459 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-12 00:35:16,497 [ scc.git] DEBUG Get sha1 of %s 2024-06-12 00:35:16,497 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:35:16,501 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-12 00:35:16,536 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-12 00:35:16,541 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8492c66d90> has no local changes 2024-06-12 00:35:16,541 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#88 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/88/)' 2024-06-12 00:35:16,549 [ scc.git] DEBUG [detached HEAD ee65db5] merge master -Dorg -Ssuccess-only 2024-06-12 00:35:16,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-12 00:35:16,549 [ scc.repo] DEBUG ## PRs found: 2024-06-12 00:35:17,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2024-06-12 00:35:17,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2024-06-12 00:35:18,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2024-06-12 00:35:18,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-06-12 00:35:19,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-12 00:35:19,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-12 00:35:20,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-06-12 00:35:20,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2024-06-12 00:35:21,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-06-12 00:35:21,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2024-06-12 00:35:21,527 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2024-06-12 00:35:21,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2024-06-12 00:35:22,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2024-06-12 00:35:22,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2024-06-12 00:35:23,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-12 00:35:23,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-12 00:35:24,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2024-06-12 00:35:24,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-06-12 00:35:25,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-12 00:35:25,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-12 00:35:26,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-06-12 00:35:26,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None 2024-06-12 00:35:27,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-06-12 00:35:27,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None 2024-06-12 00:35:27,637 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2024-06-12 00:35:28,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None 2024-06-12 00:35:28,085 [ scc.repo] DEBUG # ... Exclude label: exclude 2024-06-12 00:35:28,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378 HTTP/1.1" 200 None 2024-06-12 00:35:29,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378/comments HTTP/1.1" 200 None 2024-06-12 00:35:29,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None 2024-06-12 00:35:29,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None 2024-06-12 00:35:30,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-06-12 00:35:30,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-12 00:35:31,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-06-12 00:35:31,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2 2024-06-12 00:35:31,810 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-06-12 00:35:32,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2024-06-12 00:35:32,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2024-06-12 00:35:33,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-06-12 00:35:33,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-12 00:35:34,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-12 00:35:34,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-06-12 00:35:35,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None 2024-06-12 00:35:35,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-06-12 00:35:36,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None 2024-06-12 00:35:36,083 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2024-06-12 00:35:36,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None 2024-06-12 00:35:37,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None 2024-06-12 00:35:37,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2024-06-12 00:35:37,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2024-06-12 00:35:38,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-06-12 00:35:38,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-12 00:35:39,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-06-12 00:35:39,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2 2024-06-12 00:35:39,809 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj' 2024-06-12 00:35:40,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None 2024-06-12 00:35:40,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-06-12 00:35:41,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-12 00:35:41,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-06-12 00:35:42,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2 2024-06-12 00:35:42,146 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-06-12 00:35:42,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None 2024-06-12 00:35:43,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None 2024-06-12 00:35:43,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-06-12 00:35:44,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-12 00:35:44,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-06-12 00:35:45,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2 2024-06-12 00:35:45,004 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error' 2024-06-12 00:35:45,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2024-06-12 00:35:45,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2024-06-12 00:35:46,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-06-12 00:35:46,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-12 00:35:47,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-06-12 00:35:47,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2024-06-12 00:35:47,878 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2024-06-12 00:35:48,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None 2024-06-12 00:35:48,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None 2024-06-12 00:35:49,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None 2024-06-12 00:35:49,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None 2024-06-12 00:35:49,772 [ scc.repo] DEBUG ## Branches found: 2024-06-12 00:35:49,772 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-06-12 00:35:49,772 [ scc.git] DEBUG Get sha1 of %s 2024-06-12 00:35:49,772 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:35:49,777 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-12 00:35:49,782 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-12 00:35:49,782 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-12 00:35:49,788 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-12 00:35:49,794 [ scc.git] DEBUG Already up to date. 2024-06-12 00:35:49,794 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2024-06-12 00:35:50,337 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-06-12 00:35:50,338 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2024-06-12 00:35:50,343 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head' 2024-06-12 00:35:50,761 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-06-12 00:35:50,761 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD 2024-06-12 00:35:50,767 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head' 2024-06-12 00:35:51,181 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-06-12 00:35:51,181 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD 2024-06-12 00:35:51,187 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head' 2024-06-12 00:35:51,564 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-06-12 00:35:51,564 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD 2024-06-12 00:35:51,569 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2024-06-12 00:35:52,014 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-06-12 00:35:52,014 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2024-06-12 00:35:52,018 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2024-06-12 00:35:52,407 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-06-12 00:35:52,407 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2024-06-12 00:35:52,411 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2024-06-12 00:35:52,794 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-06-12 00:35:52,795 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2024-06-12 00:35:52,799 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2024-06-12 00:35:53,234 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-06-12 00:35:53,234 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2024-06-12 00:35:53,238 [ scc.git] DEBUG ## Unique users: [] 2024-06-12 00:35:53,238 [ scc.git] DEBUG Get sha1 of %s 2024-06-12 00:35:53,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:35:53,242 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-06-12 00:35:53,253 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:35:53,257 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-06-12 00:35:53,322 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2024-06-12 00:35:53,322 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2024-06-12 00:35:53,323 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-12 00:35:53,327 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2024-06-12 00:35:53,327 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2024-06-12 00:35:53,327 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2024-06-12 00:35:53,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:35:53,486 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-06-12 00:35:53,497 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:35:53,501 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-06-12 00:35:53,642 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-06-12 00:35:53,643 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py 2024-06-12 00:35:53,643 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-12 00:35:53,651 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------ 2024-06-12 00:35:53,651 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++ 2024-06-12 00:35:53,651 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-) 2024-06-12 00:35:53,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:35:53,896 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-06-12 00:35:53,907 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:35:53,911 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-06-12 00:35:53,991 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py 2024-06-12 00:35:53,993 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-12 00:35:53,996 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++---- 2024-06-12 00:35:53,996 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-) 2024-06-12 00:35:54,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:35:54,297 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a' 2024-06-12 00:35:54,316 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:35:54,323 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a' 2024-06-12 00:35:54,397 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py 2024-06-12 00:35:54,397 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py 2024-06-12 00:35:54,397 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-12 00:35:54,401 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++- 2024-06-12 00:35:54,401 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +- 2024-06-12 00:35:54,401 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-) 2024-06-12 00:35:54,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:35:54,708 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-06-12 00:35:54,719 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:35:54,723 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-06-12 00:35:54,756 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-12 00:35:54,759 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2024-06-12 00:35:54,759 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2024-06-12 00:35:54,759 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2024-06-12 00:35:54,759 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2024-06-12 00:35:54,759 [ scc.git] DEBUG create mode 100644 connect.py 2024-06-12 00:35:55,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:35:55,119 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-06-12 00:35:55,130 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:35:55,135 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-06-12 00:35:55,194 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py 2024-06-12 00:35:55,195 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-12 00:35:55,199 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++ 2024-06-12 00:35:55,199 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-06-12 00:35:55,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:35:55,536 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2024-06-12 00:35:55,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:35:55,554 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2024-06-12 00:35:55,634 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2024-06-12 00:35:55,636 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-12 00:35:55,640 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2024-06-12 00:35:55,640 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2024-06-12 00:35:55,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:35:55,984 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2024-06-12 00:35:55,995 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:35:56,001 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2024-06-12 00:35:56,042 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-06-12 00:35:56,043 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-12 00:35:56,051 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2024-06-12 00:35:56,051 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2024-06-12 00:35:56,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:35:56,398 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-12 00:35:56,434 [ scc.git] DEBUG Get sha1 of %s 2024-06-12 00:35:56,435 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:35:56,439 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-12 00:35:56,477 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-12 00:35:56,484 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8492cd2490> has no local changes 2024-06-12 00:35:56,485 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' Generated by OMERO-python-superbuild-push#88 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/88/)' 2024-06-12 00:35:56,495 [ scc.git] DEBUG [detached HEAD a98e2cc6] merge master -Dorg -Ssuccess-only 2024-06-12 00:35:56,495 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-12 00:35:56,495 [ scc.git] INFO Overriding base-branch from master to develop 2024-06-12 00:35:56,495 [ scc.repo] DEBUG ## PRs found: 2024-06-12 00:35:57,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-06-12 00:35:57,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-06-12 00:35:58,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-06-12 00:35:58,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-06-12 00:35:59,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-06-12 00:36:00,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-06-12 00:36:00,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-06-12 00:36:01,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-06-12 00:36:01,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-12 00:36:02,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-06-12 00:36:02,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-06-12 00:36:02,451 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-06-12 00:36:02,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-06-12 00:36:03,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-06-12 00:36:03,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-06-12 00:36:04,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-06-12 00:36:04,494 [ scc.repo] DEBUG ## Branches found: 2024-06-12 00:36:04,494 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-06-12 00:36:04,494 [ scc.git] DEBUG Get sha1 of %s 2024-06-12 00:36:04,494 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:36:04,498 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-06-12 00:36:04,502 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-12 00:36:04,502 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-06-12 00:36:04,507 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-06-12 00:36:04,512 [ scc.git] DEBUG Already up to date. 2024-06-12 00:36:04,512 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-06-12 00:36:04,922 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2024-06-12 00:36:04,923 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-06-12 00:36:04,928 [ scc.git] DEBUG ## Unique users: [] 2024-06-12 00:36:04,929 [ scc.git] DEBUG Get sha1 of %s 2024-06-12 00:36:04,929 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:36:04,932 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-12 00:36:04,938 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:36:04,942 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-12 00:36:04,998 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-06-12 00:36:04,999 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-06-12 00:36:04,999 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-12 00:36:05,000 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-12 00:36:05,004 [ scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a' 2024-06-12 00:36:05,009 [ scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-06-12 00:36:05,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:36:05,171 [ scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-12 00:36:05,178 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a' 2024-06-12 00:36:05,182 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#88](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/88/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/88/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-06-12 00:36:05,187 [ scc.config] DEBUG Found github.token 2024-06-12 00:36:05,187 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-06-12 00:36:05,187 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-12 00:36:05,230 [ scc.git] DEBUG Get sha1 of %s 2024-06-12 00:36:05,230 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:36:05,234 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-12 00:36:05,273 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-12 00:36:05,279 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8491be85e0> has no local changes 2024-06-12 00:36:05,279 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#88 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/88/)' 2024-06-12 00:36:05,287 [ scc.git] DEBUG [detached HEAD 7c2d7bf] merge master -Dorg -Ssuccess-only 2024-06-12 00:36:05,287 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-12 00:36:05,287 [ scc.repo] DEBUG ## PRs found: 2024-06-12 00:36:05,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2024-06-12 00:36:06,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/560 HTTP/1.1" 200 None 2024-06-12 00:36:06,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/560/comments HTTP/1.1" 200 None 2024-06-12 00:36:07,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823 HTTP/1.1" 200 None 2024-06-12 00:36:07,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-12 00:36:08,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-12 00:36:08,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823 HTTP/1.1" 200 None 2024-06-12 00:36:09,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/f92a4e2764982ace46474a82af4ad25bee9d8823?per_page=1 HTTP/1.1" 200 None 2024-06-12 00:36:09,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823 HTTP/1.1" 200 None 2024-06-12 00:36:09,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823/status HTTP/1.1" 200 None 2024-06-12 00:36:09,967 [ scc.repo] DEBUG - PR 560 will-moore 'linkify supports urls that include $ character' 2024-06-12 00:36:10,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/558 HTTP/1.1" 200 None 2024-06-12 00:36:10,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None 2024-06-12 00:36:11,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-12 00:36:11,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-12 00:36:12,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None 2024-06-12 00:36:12,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/575f7bbc72aad997963937297f08156ca6f7dd5e?per_page=1 HTTP/1.1" 200 None 2024-06-12 00:36:13,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None 2024-06-12 00:36:13,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/status HTTP/1.1" 200 None 2024-06-12 00:36:13,689 [ scc.repo] DEBUG - PR 558 jburel 'Update readme' 2024-06-12 00:36:14,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555 HTTP/1.1" 200 None 2024-06-12 00:36:14,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555/comments HTTP/1.1" 200 None 2024-06-12 00:36:15,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None 2024-06-12 00:36:15,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-12 00:36:16,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-12 00:36:16,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None 2024-06-12 00:36:17,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/97e479b717e34179eceea2507d3e69a04b2fec1e?per_page=1 HTTP/1.1" 200 None 2024-06-12 00:36:17,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None 2024-06-12 00:36:18,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/status HTTP/1.1" 200 None 2024-06-12 00:36:18,102 [ scc.repo] DEBUG - PR 555 chris-allan 'Archive status' 2024-06-12 00:36:18,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/554 HTTP/1.1" 200 None 2024-06-12 00:36:19,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2024-06-12 00:36:19,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2024-06-12 00:36:20,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2024-06-12 00:36:20,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-06-12 00:36:21,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-12 00:36:21,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-12 00:36:22,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-06-12 00:36:22,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None 2024-06-12 00:36:22,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-06-12 00:36:23,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None 2024-06-12 00:36:23,354 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-06-12 00:36:23,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2024-06-12 00:36:24,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2024-06-12 00:36:24,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-06-12 00:36:25,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-12 00:36:25,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-12 00:36:26,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-06-12 00:36:26,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None 2024-06-12 00:36:27,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-06-12 00:36:27,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None 2024-06-12 00:36:27,629 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2024-06-12 00:36:28,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2024-06-12 00:36:28,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2024-06-12 00:36:29,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2024-06-12 00:36:29,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-12 00:36:30,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-12 00:36:30,068 [ scc.repo] DEBUG ## Branches found: 2024-06-12 00:36:30,068 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-06-12 00:36:30,068 [ scc.git] DEBUG Get sha1 of %s 2024-06-12 00:36:30,068 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:36:30,073 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-12 00:36:30,078 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-12 00:36:30,078 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-12 00:36:30,083 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-12 00:36:30,088 [ scc.git] DEBUG Already up to date. 2024-06-12 00:36:30,088 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2024-06-12 00:36:30,636 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-06-12 00:36:30,636 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2024-06-12 00:36:30,642 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2024-06-12 00:36:31,047 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-06-12 00:36:31,048 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2024-06-12 00:36:31,052 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-06-12 00:36:31,824 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-06-12 00:36:31,824 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-06-12 00:36:31,828 [ scc.git] DEBUG Calling 'git fetch origin pull/558/head' 2024-06-12 00:36:32,260 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-06-12 00:36:32,261 [ scc.git] DEBUG * branch refs/pull/558/head -> FETCH_HEAD 2024-06-12 00:36:32,266 [ scc.git] DEBUG Calling 'git fetch origin pull/560/head' 2024-06-12 00:36:32,705 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-06-12 00:36:32,705 [ scc.git] DEBUG * branch refs/pull/560/head -> FETCH_HEAD 2024-06-12 00:36:32,710 [ scc.git] DEBUG ## Unique users: [] 2024-06-12 00:36:32,710 [ scc.git] DEBUG Get sha1 of %s 2024-06-12 00:36:32,710 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:36:32,715 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-06-12 00:36:32,721 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:36:32,726 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-06-12 00:36:32,776 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2024-06-12 00:36:32,777 [ scc.git] DEBUG Auto-merging setup.py 2024-06-12 00:36:32,778 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-12 00:36:32,782 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2024-06-12 00:36:32,782 [ scc.git] DEBUG setup.py | 1 + 2024-06-12 00:36:32,782 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2024-06-12 00:36:32,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:36:32,943 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-06-12 00:36:32,950 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:36:32,955 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-06-12 00:36:33,056 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2024-06-12 00:36:33,056 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-06-12 00:36:33,057 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-12 00:36:33,062 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2024-06-12 00:36:33,062 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2024-06-12 00:36:33,062 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2024-06-12 00:36:33,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:36:33,373 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...97e479b717e34179eceea2507d3e69a04b2fec1e' 2024-06-12 00:36:33,380 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:36:33,384 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Archive status) 97e479b717e34179eceea2507d3e69a04b2fec1e' 2024-06-12 00:36:33,455 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-06-12 00:36:33,456 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-12 00:36:33,461 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.tree.js | 3 +++ 2024-06-12 00:36:33,461 [ scc.git] DEBUG .../webclient/annotations/includes/core_metadata.html | 6 ++++++ 2024-06-12 00:36:33,461 [ scc.git] DEBUG omeroweb/webclient/tree.py | 10 ++++++++-- 2024-06-12 00:36:33,461 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 1 + 2024-06-12 00:36:33,461 [ scc.git] DEBUG 4 files changed, 18 insertions(+), 2 deletions(-) 2024-06-12 00:36:33,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:36:33,782 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...575f7bbc72aad997963937297f08156ca6f7dd5e' 2024-06-12 00:36:33,789 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:36:33,794 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 558 (Update readme) 575f7bbc72aad997963937297f08156ca6f7dd5e' 2024-06-12 00:36:33,830 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-12 00:36:33,833 [ scc.git] DEBUG README.rst | 42 +++++++++++++++++++++--------------------- 2024-06-12 00:36:33,833 [ scc.git] DEBUG 1 file changed, 21 insertions(+), 21 deletions(-) 2024-06-12 00:36:34,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:36:34,186 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f92a4e2764982ace46474a82af4ad25bee9d8823' 2024-06-12 00:36:34,194 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:36:34,199 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 560 (linkify supports urls that include $ character) f92a4e2764982ace46474a82af4ad25bee9d8823' 2024-06-12 00:36:34,217 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-12 00:36:34,221 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2024-06-12 00:36:34,221 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-06-12 00:36:34,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:36:34,600 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-12 00:36:34,641 [ scc.git] DEBUG Get sha1 of %s 2024-06-12 00:36:34,642 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-12 00:36:34,646 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-12 00:36:34,689 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-12 00:36:34,699 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8490373370> has no local changes 2024-06-12 00:36:34,699 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 555 chris-allan 'Archive status' - PR 558 jburel 'Update readme' - PR 560 will-moore 'linkify supports urls that include $ character' Generated by OMERO-python-superbuild-push#88 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/88/)' 2024-06-12 00:36:34,711 [ scc.git] DEBUG [detached HEAD 6afa2683b] merge master -Dorg -Ssuccess-only 2024-06-12 00:36:34,711 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-12 00:36:34,711 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-12 00:36:34,758 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2024-06-12 00:36:35,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:36:35,024 [ scc.config] DEBUG Found submodule.omero-marshal.url 2024-06-12 00:36:35,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:36:35,436 [ scc.config] DEBUG Found submodule.omero-py.url 2024-06-12 00:36:35,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:36:35,848 [ scc.config] DEBUG Found submodule.omero-scripts.url 2024-06-12 00:36:36,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:36:36,276 [ scc.config] DEBUG Found submodule.omero-web.url 2024-06-12 00:36:36,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-12 00:36:36,679 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-12 00:36:36,708 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8492ce0c40> has local changes 2024-06-12 00:36:36,708 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 555 chris-allan 'Archive status' - PR 558 jburel 'Update readme' - PR 560 will-moore 'linkify supports urls that include $ character' Generated by OMERO-python-superbuild-push#88 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/88/)' 2024-06-12 00:36:36,717 [ scc.git] DEBUG [detached HEAD 292032a] merge master -Dorg -Ssuccess-only 2024-06-12 00:36:36,717 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-06-12 00:36:36,718 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2024-06-12 00:36:36,718 [ scc.merge] INFO Already up to date. 2024-06-12 00:36:36,718 [ scc.merge] INFO 2024-06-12 00:36:36,718 [ scc.merge] INFO 2024-06-12 00:36:36,718 [ scc.merge] INFO Repository: ome/omero-dropbox 2024-06-12 00:36:36,718 [ scc.merge] INFO Already up to date. 2024-06-12 00:36:36,718 [ scc.merge] INFO 2024-06-12 00:36:36,718 [ scc.merge] INFO Merged PRs: 2024-06-12 00:36:36,718 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-06-12 00:36:36,718 [ scc.merge] INFO 2024-06-12 00:36:36,718 [ scc.merge] INFO Repository: ome/omero-marshal 2024-06-12 00:36:36,718 [ scc.merge] INFO Excluded PRs: 2024-06-12 00:36:36,718 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2024-06-12 00:36:36,718 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2024-06-12 00:36:36,719 [ scc.merge] INFO Already up to date. 2024-06-12 00:36:36,719 [ scc.merge] INFO 2024-06-12 00:36:36,719 [ scc.merge] INFO Merged PRs: 2024-06-12 00:36:36,719 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2024-06-12 00:36:36,719 [ scc.merge] INFO 2024-06-12 00:36:36,719 [ scc.merge] INFO Repository: ome/omero-py 2024-06-12 00:36:36,719 [ scc.merge] INFO Excluded PRs: 2024-06-12 00:36:36,719 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2024-06-12 00:36:36,719 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude) 2024-06-12 00:36:36,719 [ scc.merge] INFO - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu) 2024-06-12 00:36:36,719 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) 2024-06-12 00:36:36,719 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) 2024-06-12 00:36:36,719 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) 2024-06-12 00:36:36,719 [ scc.merge] INFO Already up to date. 2024-06-12 00:36:36,719 [ scc.merge] INFO 2024-06-12 00:36:36,719 [ scc.merge] INFO Merged PRs: 2024-06-12 00:36:36,720 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2024-06-12 00:36:36,720 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error' 2024-06-12 00:36:36,720 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-06-12 00:36:36,720 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' 2024-06-12 00:36:36,720 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2024-06-12 00:36:36,720 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-06-12 00:36:36,720 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2024-06-12 00:36:36,720 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2024-06-12 00:36:36,720 [ scc.merge] INFO 2024-06-12 00:36:36,720 [ scc.merge] INFO Repository: ome/omero-scripts 2024-06-12 00:36:36,720 [ scc.merge] INFO Excluded PRs: 2024-06-12 00:36:36,720 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-06-12 00:36:36,720 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-06-12 00:36:36,720 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-06-12 00:36:36,721 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-06-12 00:36:36,721 [ scc.merge] INFO Already up to date. 2024-06-12 00:36:36,721 [ scc.merge] INFO 2024-06-12 00:36:36,721 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-12 00:36:36,721 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-06-12 00:36:36,721 [ scc.merge] INFO 2024-06-12 00:36:36,721 [ scc.merge] INFO Repository: ome/omero-web 2024-06-12 00:36:36,721 [ scc.merge] INFO Excluded PRs: 2024-06-12 00:36:36,721 [ scc.merge] INFO - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft) 2024-06-12 00:36:36,721 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2024-06-12 00:36:36,721 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2024-06-12 00:36:36,721 [ scc.merge] INFO Already up to date. 2024-06-12 00:36:36,721 [ scc.merge] INFO 2024-06-12 00:36:36,721 [ scc.merge] INFO Merged PRs: 2024-06-12 00:36:36,721 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2024-06-12 00:36:36,721 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-06-12 00:36:36,722 [ scc.merge] INFO - PR 555 chris-allan 'Archive status' 2024-06-12 00:36:36,722 [ scc.merge] INFO - PR 558 jburel 'Update readme' 2024-06-12 00:36:36,722 [ scc.merge] INFO - PR 560 will-moore 'linkify supports urls that include $ character' 2024-06-12 00:36:36,722 [ scc.merge] INFO 2024-06-12 00:36:36,722 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-06-12 00:36:36,722 [ scc.git] DEBUG Calling 'git remote' 2024-06-12 00:36:36,728 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-06-12 00:36:36,728 [ scc.git] DEBUG Calling 'git remote' 2024-06-12 00:36:36,732 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-12 00:36:36,733 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-06-12 00:36:36,733 [ scc.git] DEBUG Calling 'git remote' 2024-06-12 00:36:36,737 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-12 00:36:36,737 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-06-12 00:36:36,737 [ scc.git] DEBUG Calling 'git remote' 2024-06-12 00:36:36,741 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-12 00:36:36,741 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-06-12 00:36:36,742 [ scc.git] DEBUG Calling 'git remote' 2024-06-12 00:36:36,745 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-12 00:36:36,746 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-06-12 00:36:36,746 [ scc.git] DEBUG Calling 'git remote' 2024-06-12 00:36:36,750 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from a4307f4 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from cca4c2f nothing to commit, working tree clean Entering 'omero-py' HEAD detached from d3a65421 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 5a90893 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 9c94fd493 nothing to commit, working tree clean HEAD detached from 05f561e nothing to commit, working tree clean 2024-06-12 00:37:06,617 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS