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Started by upstream project "Trigger" build number 103
originally caused by:
 Started by timer
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
 > git --version # timeout=10
 > git --version # 'git version 2.39.2'
 > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf
The recommended git tool is: NONE
No credentials specified
 > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
 > git --version # timeout=10
 > git --version # 'git version 2.39.2'
 > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
Commit message: "Merge pull request #17 from jburel/python3"
 > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
Checking out Revision 05f561e50be2431cd9410d50001265d0083e357b (refs/remotes/origin/master)
Commit message: "Merge pull request #282 from ome/dependabot/submodules/omero-py-d3a6542"
 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10
 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git
 > git --version # timeout=10
 > git --version # 'git version 2.39.3'
 > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 05f561e50be2431cd9410d50001265d0083e357b # timeout=10
 > git rev-list --no-walk 05f561e50be2431cd9410d50001265d0083e357b # timeout=10
Cleaning workspace
 > git rev-parse --verify HEAD # timeout=10
Resetting working tree
 > git reset --hard # timeout=10
 > git clean -fdx # timeout=10
 > git submodule foreach --recursive git reset --hard # timeout=10
 > git submodule foreach --recursive git clean -fdx # timeout=10
 > git remote # timeout=10
 > git submodule init # timeout=10
 > git submodule sync # timeout=10
 > git config --get remote.origin.url # timeout=10
 > git submodule init # timeout=10
 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
 > git config --get submodule.omero-py.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10
 > git config --get submodule.omero-web.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10
 > git config --get submodule.omero-marshal.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10
 > git config --get submodule.omero-dropbox.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10
 > git config --get submodule.omero-scripts.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10
 > git submodule update --init --recursive omero-py # timeout=10
 > git submodule update --init --recursive omero-web # timeout=10
 > git submodule update --init --recursive omero-marshal # timeout=10
[Pipeline] pwd
[Pipeline] copyArtifacts
Copied 1 artifact from "OMERO-build-push" build number 92
[Pipeline] sh
+ pushd build
~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
+ popd
~/workspace/OMERO-python-superbuild-push
+ python3 -m venv build/venv
 > git submodule update --init --recursive omero-dropbox # timeout=10
 > git submodule update --init --recursive omero-scripts # timeout=10
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ python3 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3)
Collecting pip
  Using cached pip-24.0-py3-none-any.whl (2.1 MB)
Installing collected packages: pip
  Attempting uninstall: pip
    Found existing installation: pip 21.2.3
    Uninstalling pip-21.2.3:
      Successfully uninstalled pip-21.2.3
Successfully installed pip-24.0
+ python3 -m pip install scc
Collecting scc
  Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
  Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB)
Collecting PyYAML>=5.1 (from scc)
  Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
Collecting future (from scc)
  Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
  Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB)
Collecting ruamel.yaml.jinja2 (from scc)
  Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
  Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB)
Collecting urllib3<2 (from scc)
  Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
  Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
  Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
  Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
  Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB)
Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc)
  Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB)
Collecting Deprecated (from PyGithub>=1.54->scc)
  Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
  Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
  Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB)
Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc)
  Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB)
Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached certifi-2024.6.2-py3-none-any.whl.metadata (2.2 kB)
Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc)
  Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB)
Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc)
  Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes)
Using cached scc-0.19.1-py3-none-any.whl (48 kB)
Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB)
Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB)
Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.16.0-py2.py3-none-any.whl (11 kB)
Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB)
Using cached requests-2.32.3-py3-none-any.whl (64 kB)
Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB)
Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB)
Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB)
Using cached certifi-2024.6.2-py3-none-any.whl (164 kB)
Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB)
Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB)
Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl (3.9 MB)
Using cached idna-3.7-py3-none-any.whl (66 kB)
Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB)
Using cached pycparser-2.22-py3-none-any.whl (117 kB)
Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.6.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.8 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-06-14 00:33:59,520 [  scc.config] DEBUG Found github.token
2024-06-14 00:33:59,522 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-06-14 00:33:59,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:34:00,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:34:00,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-06-14 00:34:00,546 [      scc.gh] DEBUG 4297 remaining from 5000 (Reset at 00:06
2024-06-14 00:34:00,547 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-14 00:34:00,552 [     scc.git] DEBUG Check current status
2024-06-14 00:34:00,552 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-14 00:34:00,556 [     scc.git] DEBUG 05f561e Merge pull request #282 from ome/dependabot/submodules/omero-py-d3a6542
2024-06-14 00:34:00,556 [     scc.git] DEBUG Calling 'git submodule status'
2024-06-14 00:34:00,598 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-06-14 00:34:00,601 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-06-14 00:34:00,605 [     scc.git] DEBUG  d3a65421944d94d69c3d8aa63ebdebed8f4ddb29 omero-py (v5.19.2-10-gd3a65421)
2024-06-14 00:34:00,609 [     scc.git] DEBUG  5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-06-14 00:34:00,612 [     scc.git] DEBUG  9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493)
2024-06-14 00:34:00,616 [  scc.config] DEBUG Found remote.origin.url
2024-06-14 00:34:01,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-06-14 00:34:01,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-14 00:34:01,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-14 00:34:02,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-14 00:34:02,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-14 00:34:02,787 [     scc.git] DEBUG Resetting...
2024-06-14 00:34:02,788 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-06-14 00:34:02,795 [     scc.git] DEBUG HEAD is now at 05f561e Merge pull request #282 from ome/dependabot/submodules/omero-py-d3a6542
2024-06-14 00:34:02,795 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-06-14 00:34:02,850 [     scc.git] DEBUG Check current status
2024-06-14 00:34:02,850 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-14 00:34:02,854 [     scc.git] DEBUG 05f561e Merge pull request #282 from ome/dependabot/submodules/omero-py-d3a6542
2024-06-14 00:34:02,854 [     scc.git] DEBUG Calling 'git submodule status'
2024-06-14 00:34:02,895 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-06-14 00:34:02,898 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-06-14 00:34:02,901 [     scc.git] DEBUG  d3a65421944d94d69c3d8aa63ebdebed8f4ddb29 omero-py (v5.19.2-10-gd3a65421)
2024-06-14 00:34:02,905 [     scc.git] DEBUG  5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-06-14 00:34:02,908 [     scc.git] DEBUG  9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493)
2024-06-14 00:34:02,909 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-06-14 00:34:02,909 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-06-14 00:34:02,909 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-06-14 00:34:02,909 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-06-14 00:34:02,910 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-06-14 00:34:02,910 [    scc.repo] DEBUG ## PRs found:
2024-06-14 00:34:03,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-06-14 00:34:03,226 [    scc.repo] DEBUG ## Branches found:
2024-06-14 00:34:03,226 [     scc.git] DEBUG Get sha1 of %s
2024-06-14 00:34:03,226 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:34:03,231 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-14 00:34:03,238 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-14 00:34:03,238 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-14 00:34:03,244 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-14 00:34:03,248 [     scc.git] DEBUG Already up to date.

2024-06-14 00:34:03,249 [     scc.git] DEBUG ## Unique users: []
2024-06-14 00:34:03,249 [     scc.git] DEBUG Get sha1 of %s
2024-06-14 00:34:03,249 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:34:03,253 [     scc.git] DEBUG Calling 'git submodule update'
2024-06-14 00:34:03,294 [     scc.git] DEBUG Get sha1 of %s
2024-06-14 00:34:03,295 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:34:03,307 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-06-14 00:34:03,381 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fb3e91012e0> has no local changes
2024-06-14 00:34:03,382 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-python-superbuild
Already up to date.


Generated by OMERO-python-superbuild-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/90/)'
2024-06-14 00:34:03,409 [     scc.git] DEBUG [detached HEAD 74e39d2] merge master -Dorg -Snone
2024-06-14 00:34:03,409 [   scc.merge] INFO  Repository: ome/omero-python-superbuild
2024-06-14 00:34:03,409 [   scc.merge] INFO  Already up to date.
2024-06-14 00:34:03,409 [   scc.merge] INFO  
2024-06-14 00:34:03,409 [   scc.merge] INFO  
2024-06-14 00:34:03,409 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-06-14 00:34:03,409 [     scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master

submodules:
  omero-scripts:
    base-branch: develop
2024-06-14 00:34:05,910 [  scc.config] DEBUG Found github.token
2024-06-14 00:34:05,913 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-06-14 00:34:06,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:34:06,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:34:06,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-06-14 00:34:06,931 [      scc.gh] DEBUG 4289 remaining from 5000 (Reset at 00:06
2024-06-14 00:34:06,931 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-14 00:34:06,936 [     scc.git] DEBUG Check current status
2024-06-14 00:34:06,936 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-14 00:34:06,940 [     scc.git] DEBUG 74e39d2 merge master -Dorg -Snone
2024-06-14 00:34:06,940 [     scc.git] DEBUG Calling 'git submodule status'
2024-06-14 00:34:06,979 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-06-14 00:34:06,982 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-06-14 00:34:06,986 [     scc.git] DEBUG  d3a65421944d94d69c3d8aa63ebdebed8f4ddb29 omero-py (v5.19.2-10-gd3a65421)
2024-06-14 00:34:06,989 [     scc.git] DEBUG  5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-06-14 00:34:06,992 [     scc.git] DEBUG  9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493)
2024-06-14 00:34:06,997 [  scc.config] DEBUG Found remote.origin.url
2024-06-14 00:34:06,997 [     scc.git] DEBUG Reading repository configuration from repositories.yml
2024-06-14 00:34:06,998 [     scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
  omero-scripts:
    base-branch: develop

2024-06-14 00:34:07,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-06-14 00:34:07,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-14 00:34:08,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-14 00:34:08,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-14 00:34:09,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-14 00:34:09,242 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-14 00:34:09,290 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-06-14 00:34:09,290 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-14 00:34:09,294 [     scc.git] DEBUG Check current status
2024-06-14 00:34:09,294 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-14 00:34:09,298 [     scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-06-14 00:34:09,298 [     scc.git] DEBUG Calling 'git submodule status'
2024-06-14 00:34:09,343 [  scc.config] DEBUG Found remote.origin.url
2024-06-14 00:34:09,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-06-14 00:34:10,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-14 00:34:10,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-14 00:34:11,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-14 00:34:11,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-14 00:34:11,581 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-14 00:34:11,626 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-14 00:34:11,627 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-06-14 00:34:11,627 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-14 00:34:11,632 [     scc.git] DEBUG Check current status
2024-06-14 00:34:11,632 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-14 00:34:11,636 [     scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-06-14 00:34:11,636 [     scc.git] DEBUG Calling 'git submodule status'
2024-06-14 00:34:11,683 [  scc.config] DEBUG Found remote.origin.url
2024-06-14 00:34:12,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-06-14 00:34:12,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-14 00:34:12,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-14 00:34:13,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-14 00:34:13,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-14 00:34:13,820 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-14 00:34:13,863 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-14 00:34:13,864 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-06-14 00:34:13,864 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-14 00:34:13,868 [     scc.git] DEBUG Check current status
2024-06-14 00:34:13,868 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-14 00:34:13,873 [     scc.git] DEBUG d3a65421 Merge pull request #410 from jburel/python_wheel
2024-06-14 00:34:13,874 [     scc.git] DEBUG Calling 'git submodule status'
2024-06-14 00:34:13,919 [  scc.config] DEBUG Found remote.origin.url
2024-06-14 00:34:14,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-06-14 00:34:14,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-14 00:34:15,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-14 00:34:15,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-14 00:34:16,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-14 00:34:16,040 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-14 00:34:16,080 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-14 00:34:16,081 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-06-14 00:34:16,081 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-14 00:34:16,087 [     scc.git] DEBUG Check current status
2024-06-14 00:34:16,087 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-14 00:34:16,091 [     scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0
2024-06-14 00:34:16,091 [     scc.git] DEBUG Calling 'git submodule status'
2024-06-14 00:34:16,133 [  scc.config] DEBUG Found remote.origin.url
2024-06-14 00:34:16,133 [     scc.git] DEBUG Repository configuration:
base-branch: develop

2024-06-14 00:34:16,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-06-14 00:34:17,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-14 00:34:17,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-14 00:34:17,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-14 00:34:18,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-14 00:34:18,288 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-14 00:34:18,327 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-14 00:34:18,328 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-06-14 00:34:18,328 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-14 00:34:18,334 [     scc.git] DEBUG Check current status
2024-06-14 00:34:18,335 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-14 00:34:18,339 [     scc.git] DEBUG 9c94fd493 Bump version: 5.26.0 → 5.26.1.dev0
2024-06-14 00:34:18,339 [     scc.git] DEBUG Calling 'git submodule status'
2024-06-14 00:34:18,380 [  scc.config] DEBUG Found remote.origin.url
2024-06-14 00:34:18,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-06-14 00:34:19,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-14 00:34:19,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-14 00:34:20,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-14 00:34:20,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-14 00:34:20,493 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-14 00:34:20,534 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-14 00:34:20,534 [     scc.git] DEBUG Resetting...
2024-06-14 00:34:20,534 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-06-14 00:34:20,540 [     scc.git] DEBUG HEAD is now at 74e39d2 merge master -Dorg -Snone
2024-06-14 00:34:20,541 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-06-14 00:34:20,594 [     scc.git] DEBUG Check current status
2024-06-14 00:34:20,595 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-14 00:34:20,599 [     scc.git] DEBUG 74e39d2 merge master -Dorg -Snone
2024-06-14 00:34:20,599 [     scc.git] DEBUG Calling 'git submodule status'
2024-06-14 00:34:20,638 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-06-14 00:34:20,641 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-06-14 00:34:20,644 [     scc.git] DEBUG  d3a65421944d94d69c3d8aa63ebdebed8f4ddb29 omero-py (v5.19.2-10-gd3a65421)
2024-06-14 00:34:20,648 [     scc.git] DEBUG  5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-06-14 00:34:20,652 [     scc.git] DEBUG  9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493)
2024-06-14 00:34:20,653 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-06-14 00:34:20,653 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-06-14 00:34:20,653 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-06-14 00:34:20,653 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-06-14 00:34:20,653 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-06-14 00:34:20,653 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2024-06-14 00:34:20,653 [    scc.repo] DEBUG ## PRs found:
2024-06-14 00:34:20,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-06-14 00:34:20,942 [    scc.repo] DEBUG ## Branches found:
2024-06-14 00:34:20,942 [     scc.git] DEBUG Get sha1 of %s
2024-06-14 00:34:20,942 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:34:20,946 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-14 00:34:20,950 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-14 00:34:20,950 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-14 00:34:20,954 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-14 00:34:20,958 [     scc.git] DEBUG Already up to date.

2024-06-14 00:34:20,958 [     scc.git] DEBUG ## Unique users: []
2024-06-14 00:34:20,958 [     scc.git] DEBUG Get sha1 of %s
2024-06-14 00:34:20,958 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:34:20,962 [     scc.git] DEBUG Calling 'git submodule update'
2024-06-14 00:34:21,001 [     scc.git] DEBUG Get sha1 of %s
2024-06-14 00:34:21,001 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:34:21,005 [    scc.repo] DEBUG ## PRs found:
2024-06-14 00:34:21,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-06-14 00:34:21,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-06-14 00:34:22,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-06-14 00:34:22,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-06-14 00:34:23,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-14 00:34:23,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-06-14 00:34:24,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-06-14 00:34:24,392 [    scc.repo] DEBUG   - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-06-14 00:34:24,392 [    scc.repo] DEBUG ## Branches found:
2024-06-14 00:34:24,392 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-06-14 00:34:24,392 [     scc.git] DEBUG Get sha1 of %s
2024-06-14 00:34:24,392 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:34:24,398 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-14 00:34:24,402 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-14 00:34:24,402 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-14 00:34:24,407 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-14 00:34:24,413 [     scc.git] DEBUG Already up to date.

2024-06-14 00:34:24,413 [     scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-06-14 00:34:24,803 [     scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-06-14 00:34:24,804 [     scc.git] DEBUG  * branch            refs/pull/16/head -> FETCH_HEAD
2024-06-14 00:34:24,809 [     scc.git] DEBUG ## Unique users: []
2024-06-14 00:34:24,810 [     scc.git] DEBUG Get sha1 of %s
2024-06-14 00:34:24,810 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:34:24,815 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-06-14 00:34:24,820 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:34:24,825 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-06-14 00:34:24,843 [     scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-06-14 00:34:24,843 [     scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-06-14 00:34:24,843 [     scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-06-14 00:34:24,843 [     scc.git] DEBUG Auto-merging src/fsLists.py
2024-06-14 00:34:24,843 [     scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-06-14 00:34:24,843 [     scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-06-14 00:34:24,843 [     scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-06-14 00:34:24,843 [     scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-06-14 00:34:24,843 [     scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-06-14 00:34:24,843 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-14 00:34:24,847 [     scc.git] DEBUG  src/fsAbstractPlatformMonitor.py |  6 +++---
2024-06-14 00:34:24,847 [     scc.git] DEBUG  src/fsDirectory.py               | 46 ++++++++++++++++++++--------------------
2024-06-14 00:34:24,847 [     scc.git] DEBUG  src/fsDropBox.py                 | 24 ++++++++++-----------
2024-06-14 00:34:24,847 [     scc.git] DEBUG  src/fsLists.py                   | 14 ++++++------
2024-06-14 00:34:24,847 [     scc.git] DEBUG  src/fsMac-10-5-Monitor.py        | 10 ++++-----
2024-06-14 00:34:24,849 [     scc.git] DEBUG  src/fsMonitor.py                 | 24 ++++++++++-----------
2024-06-14 00:34:24,849 [     scc.git] DEBUG  src/fsMonitorServer.py           | 10 ++++-----
2024-06-14 00:34:24,849 [     scc.git] DEBUG  src/fsPyinotifyMonitor.py        |  8 +++----
2024-06-14 00:34:24,850 [     scc.git] DEBUG  src/fsWin-XP-Monitor.py          | 20 ++++++++---------
2024-06-14 00:34:24,850 [     scc.git] DEBUG  9 files changed, 81 insertions(+), 81 deletions(-)
2024-06-14 00:34:25,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:34:25,005 [     scc.git] DEBUG Calling 'git submodule update'
2024-06-14 00:34:25,049 [     scc.git] DEBUG Get sha1 of %s
2024-06-14 00:34:25,049 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:34:25,054 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-14 00:34:25,095 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-06-14 00:34:25,101 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fb499e28d60> has no local changes
2024-06-14 00:34:25,101 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-dropbox
Already up to date.

Merged PRs:
  - PR 16 joshmoore 'Review all instances of whitelist/blacklist'

Generated by OMERO-python-superbuild-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/90/)'
2024-06-14 00:34:25,108 [     scc.git] DEBUG [detached HEAD f65d75a] merge master -Dorg -Ssuccess-only
2024-06-14 00:34:25,109 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-14 00:34:25,109 [    scc.repo] DEBUG ## PRs found:
2024-06-14 00:34:25,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-06-14 00:34:26,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-06-14 00:34:26,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-06-14 00:34:27,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-06-14 00:34:27,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-14 00:34:28,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-14 00:34:28,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-06-14 00:34:29,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-06-14 00:34:29,055 [    scc.repo] DEBUG   - PR 69 will-moore 'Roi encoder allows Shape None'
2024-06-14 00:34:29,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-06-14 00:34:29,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-06-14 00:34:30,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-06-14 00:34:30,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-06-14 00:34:30,948 [    scc.repo] DEBUG ## Branches found:
2024-06-14 00:34:30,948 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-06-14 00:34:30,948 [     scc.git] DEBUG Get sha1 of %s
2024-06-14 00:34:30,949 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:34:30,954 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-14 00:34:30,958 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-14 00:34:30,958 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-14 00:34:30,963 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-14 00:34:30,967 [     scc.git] DEBUG Already up to date.

2024-06-14 00:34:30,967 [     scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-06-14 00:34:31,426 [     scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-06-14 00:34:31,426 [     scc.git] DEBUG  * branch            refs/pull/69/head -> FETCH_HEAD
2024-06-14 00:34:31,432 [     scc.git] DEBUG ## Unique users: []
2024-06-14 00:34:31,432 [     scc.git] DEBUG Get sha1 of %s
2024-06-14 00:34:31,432 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:34:31,436 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-06-14 00:34:31,441 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:34:31,445 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-06-14 00:34:31,473 [     scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-06-14 00:34:31,474 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-14 00:34:31,477 [     scc.git] DEBUG  omero_marshal/encode/encoders/roi.py | 5 +++--
2024-06-14 00:34:31,477 [     scc.git] DEBUG  tests/unit/conftest.py               | 5 ++++-
2024-06-14 00:34:31,477 [     scc.git] DEBUG  2 files changed, 7 insertions(+), 3 deletions(-)
2024-06-14 00:34:31,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:34:31,667 [     scc.git] DEBUG Calling 'git submodule update'
2024-06-14 00:34:31,704 [     scc.git] DEBUG Get sha1 of %s
2024-06-14 00:34:31,704 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:34:31,708 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-14 00:34:31,745 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-06-14 00:34:31,751 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fb499e2dd90> has no local changes
2024-06-14 00:34:31,752 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-marshal
Excluded PRs:
  - PR 34 chris-allan 'Initial support for Event' (exclude comment)
  - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.

Merged PRs:
  - PR 69 will-moore 'Roi encoder allows Shape None'

Generated by OMERO-python-superbuild-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/90/)'
2024-06-14 00:34:31,760 [     scc.git] DEBUG [detached HEAD 5fab085] merge master -Dorg -Ssuccess-only
2024-06-14 00:34:31,760 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-14 00:34:31,760 [    scc.repo] DEBUG ## PRs found:
2024-06-14 00:34:32,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-06-14 00:34:32,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-06-14 00:34:33,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-06-14 00:34:33,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-06-14 00:34:34,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-14 00:34:34,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-14 00:34:35,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-06-14 00:34:35,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-06-14 00:34:36,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-06-14 00:34:36,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-06-14 00:34:36,663 [    scc.repo] DEBUG   - PR 408 jburel 'remove deprecated method'
2024-06-14 00:34:37,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-06-14 00:34:37,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-06-14 00:34:38,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-06-14 00:34:38,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-14 00:34:39,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-14 00:34:39,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-06-14 00:34:40,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-06-14 00:34:40,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-14 00:34:41,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-14 00:34:41,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-06-14 00:34:41,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-06-14 00:34:42,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-06-14 00:34:42,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-06-14 00:34:42,837 [    scc.repo] DEBUG   - PR 391 joshmoore 'Add jstack command'
2024-06-14 00:34:43,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-06-14 00:34:43,291 [    scc.repo] DEBUG   # ... Exclude label: exclude
2024-06-14 00:34:43,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378 HTTP/1.1" 200 None
2024-06-14 00:34:44,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378/comments HTTP/1.1" 200 None
2024-06-14 00:34:44,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-06-14 00:34:45,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-06-14 00:34:45,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-06-14 00:34:46,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-14 00:34:46,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-06-14 00:34:47,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-06-14 00:34:47,364 [    scc.repo] DEBUG   - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-06-14 00:34:47,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-06-14 00:34:48,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-06-14 00:34:48,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-06-14 00:34:49,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-14 00:34:49,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-14 00:34:50,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-06-14 00:34:50,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-06-14 00:34:51,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-06-14 00:34:51,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-06-14 00:34:51,665 [    scc.repo] DEBUG   - PR 332 jburel 'Build conda'
2024-06-14 00:34:52,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-06-14 00:34:52,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-06-14 00:34:53,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-06-14 00:34:53,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-06-14 00:34:54,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-06-14 00:34:54,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-14 00:34:55,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-06-14 00:34:55,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-06-14 00:34:55,514 [    scc.repo] DEBUG   - PR 299 joshmoore 'Add parents and children to omero obj'
2024-06-14 00:34:55,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-06-14 00:34:56,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-06-14 00:34:56,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-14 00:34:57,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-06-14 00:34:57,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-06-14 00:34:57,797 [    scc.repo] DEBUG   - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-06-14 00:34:58,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-06-14 00:34:58,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-06-14 00:34:59,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-06-14 00:34:59,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-14 00:35:00,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-06-14 00:35:00,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-06-14 00:35:00,778 [    scc.repo] DEBUG   - PR 207 manics 'BlitzGateway.connect raise on error'
2024-06-14 00:35:01,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-06-14 00:35:01,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-06-14 00:35:02,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-06-14 00:35:02,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-14 00:35:03,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-06-14 00:35:03,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-06-14 00:35:03,687 [    scc.repo] DEBUG   - PR 199 joshmoore 'user: allow setting default group'
2024-06-14 00:35:04,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-06-14 00:35:04,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-06-14 00:35:05,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-06-14 00:35:05,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-06-14 00:35:05,769 [    scc.repo] DEBUG ## Branches found:
2024-06-14 00:35:05,770 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-06-14 00:35:05,770 [     scc.git] DEBUG Get sha1 of %s
2024-06-14 00:35:05,770 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:35:05,775 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-14 00:35:05,779 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-14 00:35:05,779 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-14 00:35:05,784 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-14 00:35:05,788 [     scc.git] DEBUG Already up to date.

2024-06-14 00:35:05,788 [     scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-06-14 00:35:06,391 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-14 00:35:06,391 [     scc.git] DEBUG  * branch              refs/pull/199/head -> FETCH_HEAD
2024-06-14 00:35:06,395 [     scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-06-14 00:35:06,868 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-14 00:35:06,868 [     scc.git] DEBUG  * branch              refs/pull/207/head -> FETCH_HEAD
2024-06-14 00:35:06,873 [     scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-06-14 00:35:07,308 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-14 00:35:07,309 [     scc.git] DEBUG  * branch              refs/pull/266/head -> FETCH_HEAD
2024-06-14 00:35:07,313 [     scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-06-14 00:35:07,729 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-14 00:35:07,729 [     scc.git] DEBUG  * branch              refs/pull/299/head -> FETCH_HEAD
2024-06-14 00:35:07,734 [     scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-06-14 00:35:08,191 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-14 00:35:08,191 [     scc.git] DEBUG  * branch              refs/pull/332/head -> FETCH_HEAD
2024-06-14 00:35:08,197 [     scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-06-14 00:35:08,564 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-14 00:35:08,565 [     scc.git] DEBUG  * branch              refs/pull/337/head -> FETCH_HEAD
2024-06-14 00:35:08,569 [     scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-06-14 00:35:08,939 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-14 00:35:08,939 [     scc.git] DEBUG  * branch              refs/pull/391/head -> FETCH_HEAD
2024-06-14 00:35:08,945 [     scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-06-14 00:35:09,378 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-06-14 00:35:09,378 [     scc.git] DEBUG  * branch              refs/pull/408/head -> FETCH_HEAD
2024-06-14 00:35:09,383 [     scc.git] DEBUG ## Unique users: []
2024-06-14 00:35:09,383 [     scc.git] DEBUG Get sha1 of %s
2024-06-14 00:35:09,383 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:35:09,388 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-06-14 00:35:09,398 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:35:09,402 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-06-14 00:35:09,453 [     scc.git] DEBUG Auto-merging src/omero/cli.py
2024-06-14 00:35:09,453 [     scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-06-14 00:35:09,453 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-14 00:35:09,458 [     scc.git] DEBUG  src/omero/cli.py          |  6 ++++++
2024-06-14 00:35:09,458 [     scc.git] DEBUG  src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-06-14 00:35:09,458 [     scc.git] DEBUG  2 files changed, 39 insertions(+), 3 deletions(-)
2024-06-14 00:35:09,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:35:09,623 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-06-14 00:35:09,634 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:35:09,639 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-06-14 00:35:09,686 [     scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-06-14 00:35:09,686 [     scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-06-14 00:35:09,687 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-14 00:35:09,694 [     scc.git] DEBUG  src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-06-14 00:35:09,694 [     scc.git] DEBUG  test/unit/test_gateway.py     | 16 ++++++++++++++++
2024-06-14 00:35:09,694 [     scc.git] DEBUG  2 files changed, 29 insertions(+), 6 deletions(-)
2024-06-14 00:35:10,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:35:10,029 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-06-14 00:35:10,041 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:35:10,046 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-06-14 00:35:10,146 [     scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-06-14 00:35:10,146 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-14 00:35:10,150 [     scc.git] DEBUG  src/omero/plugins/search.py | 13 +++++++++----
2024-06-14 00:35:10,150 [     scc.git] DEBUG  1 file changed, 9 insertions(+), 4 deletions(-)
2024-06-14 00:35:10,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:35:10,445 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-06-14 00:35:10,461 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:35:10,466 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-06-14 00:35:10,554 [     scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-06-14 00:35:10,554 [     scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-06-14 00:35:10,554 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-14 00:35:10,558 [     scc.git] DEBUG  src/omero/plugins/obj.py      | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-06-14 00:35:10,558 [     scc.git] DEBUG  test/unit/clitest/test_obj.py |  2 +-
2024-06-14 00:35:10,558 [     scc.git] DEBUG  2 files changed, 69 insertions(+), 2 deletions(-)
2024-06-14 00:35:10,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:35:10,867 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-06-14 00:35:10,886 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:35:10,894 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-06-14 00:35:10,923 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-14 00:35:10,926 [     scc.git] DEBUG  .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-06-14 00:35:10,926 [     scc.git] DEBUG  connect.py                    | 11 +++++++++++
2024-06-14 00:35:10,927 [     scc.git] DEBUG  2 files changed, 48 insertions(+)
2024-06-14 00:35:10,927 [     scc.git] DEBUG  create mode 100644 .github/workflows/install.yml
2024-06-14 00:35:10,927 [     scc.git] DEBUG  create mode 100644 connect.py
2024-06-14 00:35:11,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:35:11,301 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-06-14 00:35:11,314 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:35:11,319 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-06-14 00:35:11,373 [     scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-06-14 00:35:11,375 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-14 00:35:11,378 [     scc.git] DEBUG  src/omero/plugins/import.py | 2 ++
2024-06-14 00:35:11,378 [     scc.git] DEBUG  1 file changed, 2 insertions(+)
2024-06-14 00:35:11,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:35:11,723 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-06-14 00:35:11,735 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:35:11,739 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-06-14 00:35:11,837 [     scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-06-14 00:35:11,838 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-14 00:35:11,841 [     scc.git] DEBUG  src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-06-14 00:35:11,841 [     scc.git] DEBUG  1 file changed, 59 insertions(+), 2 deletions(-)
2024-06-14 00:35:12,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:35:12,151 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-06-14 00:35:12,162 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:35:12,166 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-06-14 00:35:12,212 [     scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-06-14 00:35:12,213 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-14 00:35:12,220 [     scc.git] DEBUG  src/omero/gateway/__init__.py | 36 ------------------------------------
2024-06-14 00:35:12,220 [     scc.git] DEBUG  1 file changed, 36 deletions(-)
2024-06-14 00:35:12,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:35:12,576 [     scc.git] DEBUG Calling 'git submodule update'
2024-06-14 00:35:12,616 [     scc.git] DEBUG Get sha1 of %s
2024-06-14 00:35:12,616 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:35:12,620 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-14 00:35:12,659 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-06-14 00:35:12,668 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fb499e99cd0> has no local changes
2024-06-14 00:35:12,668 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-py
Excluded PRs:
  - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
  - PR 387 will-moore 'Numpy pixels type' (label: exclude)
  - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
  - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
  - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
  - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.

Merged PRs:
  - PR 199 joshmoore 'user: allow setting default group'
  - PR 207 manics 'BlitzGateway.connect raise on error'
  - PR 266 joshmoore 'errors: use raise_error from cli plugins'
  - PR 299 joshmoore 'Add parents and children to omero obj'
  - PR 332 jburel 'Build conda'
  - PR 337 will-moore 'bulk.yml depth is passed to xargs'
  - PR 391 joshmoore 'Add jstack command'
  - PR 408 jburel 'remove deprecated method'

Generated by OMERO-python-superbuild-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/90/)'
2024-06-14 00:35:12,679 [     scc.git] DEBUG [detached HEAD 494fc836] merge master -Dorg -Ssuccess-only
2024-06-14 00:35:12,679 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-14 00:35:12,680 [     scc.git] INFO  Overriding base-branch from master to develop
2024-06-14 00:35:12,680 [    scc.repo] DEBUG ## PRs found:
2024-06-14 00:35:13,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-06-14 00:35:13,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-06-14 00:35:14,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-06-14 00:35:14,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-06-14 00:35:15,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-06-14 00:35:15,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-06-14 00:35:16,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-06-14 00:35:16,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-06-14 00:35:17,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-14 00:35:17,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-06-14 00:35:18,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-06-14 00:35:18,179 [    scc.repo] DEBUG   - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-06-14 00:35:18,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-06-14 00:35:19,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-06-14 00:35:19,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-06-14 00:35:20,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-06-14 00:35:20,270 [    scc.repo] DEBUG ## Branches found:
2024-06-14 00:35:20,270 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-06-14 00:35:20,270 [     scc.git] DEBUG Get sha1 of %s
2024-06-14 00:35:20,270 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:35:20,276 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-06-14 00:35:20,279 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-14 00:35:20,279 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-06-14 00:35:20,284 [     scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-06-14 00:35:20,289 [     scc.git] DEBUG Already up to date.

2024-06-14 00:35:20,289 [     scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-06-14 00:35:20,753 [     scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-06-14 00:35:20,753 [     scc.git] DEBUG  * branch            refs/pull/202/head -> FETCH_HEAD
2024-06-14 00:35:20,758 [     scc.git] DEBUG ## Unique users: []
2024-06-14 00:35:20,758 [     scc.git] DEBUG Get sha1 of %s
2024-06-14 00:35:20,759 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:35:20,763 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-06-14 00:35:20,769 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:35:20,773 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-06-14 00:35:20,834 [     scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-06-14 00:35:20,834 [     scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-06-14 00:35:20,834 [     scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-06-14 00:35:20,834 [     scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-06-14 00:35:20,840 [     scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a'
2024-06-14 00:35:20,847 [     scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0
2024-06-14 00:35:20,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:35:20,998 [     scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-06-14 00:35:21,004 [     scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a'
2024-06-14 00:35:21,010 [     scc.git] INFO    - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#90](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/90/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/90/consoleText) for more details.
Possible conflicts:
  - Upstream changes
    - omero/annotation_scripts/KeyVal_to_csv.py

--conflicts

2024-06-14 00:35:21,014 [  scc.config] DEBUG Found github.token
2024-06-14 00:35:21,014 [     scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-06-14 00:35:21,014 [     scc.git] DEBUG Calling 'git submodule update'
2024-06-14 00:35:21,056 [     scc.git] DEBUG Get sha1 of %s
2024-06-14 00:35:21,056 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:35:21,060 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-14 00:35:21,102 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-06-14 00:35:21,109 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fb498dad5e0> has no local changes
2024-06-14 00:35:21,110 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-scripts
Excluded PRs:
  - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
  - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
  - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
  - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.

Conflicting PRs (not included):
  - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'

Generated by OMERO-python-superbuild-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/90/)'
2024-06-14 00:35:21,120 [     scc.git] DEBUG [detached HEAD 0f90d69] merge master -Dorg -Ssuccess-only
2024-06-14 00:35:21,120 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-14 00:35:21,120 [    scc.repo] DEBUG ## PRs found:
2024-06-14 00:35:21,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-06-14 00:35:22,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/560 HTTP/1.1" 200 None
2024-06-14 00:35:22,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/560/comments HTTP/1.1" 200 None
2024-06-14 00:35:23,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823 HTTP/1.1" 200 None
2024-06-14 00:35:23,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-14 00:35:24,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-14 00:35:24,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823 HTTP/1.1" 200 None
2024-06-14 00:35:25,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/f92a4e2764982ace46474a82af4ad25bee9d8823?per_page=1 HTTP/1.1" 200 None
2024-06-14 00:35:25,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823 HTTP/1.1" 200 None
2024-06-14 00:35:26,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823/status HTTP/1.1" 200 None
2024-06-14 00:35:26,024 [    scc.repo] DEBUG   - PR 560 will-moore 'linkify supports urls that include $ character'
2024-06-14 00:35:26,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/558 HTTP/1.1" 200 None
2024-06-14 00:35:27,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None
2024-06-14 00:35:27,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-14 00:35:27,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-14 00:35:28,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None
2024-06-14 00:35:28,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/575f7bbc72aad997963937297f08156ca6f7dd5e?per_page=1 HTTP/1.1" 200 None
2024-06-14 00:35:29,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None
2024-06-14 00:35:29,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/status HTTP/1.1" 200 None
2024-06-14 00:35:29,893 [    scc.repo] DEBUG   - PR 558 jburel 'Update readme'
2024-06-14 00:35:30,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555 HTTP/1.1" 200 None
2024-06-14 00:35:30,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555/comments HTTP/1.1" 200 None
2024-06-14 00:35:31,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None
2024-06-14 00:35:31,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-14 00:35:32,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-14 00:35:32,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None
2024-06-14 00:35:33,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/97e479b717e34179eceea2507d3e69a04b2fec1e?per_page=1 HTTP/1.1" 200 None
2024-06-14 00:35:33,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None
2024-06-14 00:35:34,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/status HTTP/1.1" 200 None
2024-06-14 00:35:34,187 [    scc.repo] DEBUG   - PR 555 chris-allan 'Archive status'
2024-06-14 00:35:34,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/554 HTTP/1.1" 200 None
2024-06-14 00:35:35,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-06-14 00:35:35,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-06-14 00:35:36,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-06-14 00:35:36,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-06-14 00:35:37,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-14 00:35:37,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-14 00:35:38,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-06-14 00:35:38,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-06-14 00:35:38,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-06-14 00:35:39,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-06-14 00:35:39,338 [    scc.repo] DEBUG   - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-06-14 00:35:39,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-06-14 00:35:40,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-06-14 00:35:40,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-06-14 00:35:41,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-14 00:35:41,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-14 00:35:42,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-06-14 00:35:42,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-06-14 00:35:43,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-06-14 00:35:43,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-06-14 00:35:43,606 [    scc.repo] DEBUG   - PR 527 will-moore 'Add some initial CSP settings to test'
2024-06-14 00:35:44,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-06-14 00:35:44,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-06-14 00:35:45,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-06-14 00:35:45,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-14 00:35:46,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-14 00:35:46,054 [    scc.repo] DEBUG ## Branches found:
2024-06-14 00:35:46,054 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-06-14 00:35:46,054 [     scc.git] DEBUG Get sha1 of %s
2024-06-14 00:35:46,054 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:35:46,059 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-14 00:35:46,063 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-14 00:35:46,064 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-14 00:35:46,068 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-14 00:35:46,073 [     scc.git] DEBUG Already up to date.

2024-06-14 00:35:46,073 [     scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-06-14 00:35:46,730 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-06-14 00:35:46,730 [     scc.git] DEBUG  * branch                refs/pull/527/head -> FETCH_HEAD
2024-06-14 00:35:46,735 [     scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-06-14 00:35:47,145 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-06-14 00:35:47,145 [     scc.git] DEBUG  * branch                refs/pull/534/head -> FETCH_HEAD
2024-06-14 00:35:47,151 [     scc.git] DEBUG Calling 'git fetch origin pull/555/head'
2024-06-14 00:35:47,993 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-06-14 00:35:47,993 [     scc.git] DEBUG  * branch                refs/pull/555/head -> FETCH_HEAD
2024-06-14 00:35:48,000 [     scc.git] DEBUG Calling 'git fetch origin pull/558/head'
2024-06-14 00:35:48,480 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-06-14 00:35:48,481 [     scc.git] DEBUG  * branch                refs/pull/558/head -> FETCH_HEAD
2024-06-14 00:35:48,486 [     scc.git] DEBUG Calling 'git fetch origin pull/560/head'
2024-06-14 00:35:48,906 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-06-14 00:35:48,906 [     scc.git] DEBUG  * branch                refs/pull/560/head -> FETCH_HEAD
2024-06-14 00:35:48,911 [     scc.git] DEBUG ## Unique users: []
2024-06-14 00:35:48,911 [     scc.git] DEBUG Get sha1 of %s
2024-06-14 00:35:48,911 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:35:48,918 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-06-14 00:35:48,925 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:35:48,929 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-06-14 00:35:49,000 [     scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-06-14 00:35:49,000 [     scc.git] DEBUG Auto-merging setup.py
2024-06-14 00:35:49,002 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-14 00:35:49,006 [     scc.git] DEBUG  omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-06-14 00:35:49,006 [     scc.git] DEBUG  setup.py             |  1 +
2024-06-14 00:35:49,006 [     scc.git] DEBUG  2 files changed, 42 insertions(+), 1 deletion(-)
2024-06-14 00:35:49,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:35:49,167 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-06-14 00:35:49,175 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:35:49,180 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-06-14 00:35:49,306 [     scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-06-14 00:35:49,306 [     scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-06-14 00:35:49,307 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-14 00:35:49,311 [     scc.git] DEBUG  omeroweb/webclient/webclient_gateway.py | 2 +-
2024-06-14 00:35:49,311 [     scc.git] DEBUG  omeroweb/webgateway/marshal.py          | 4 ++--
2024-06-14 00:35:49,312 [     scc.git] DEBUG  2 files changed, 3 insertions(+), 3 deletions(-)
2024-06-14 00:35:49,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:35:49,578 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...97e479b717e34179eceea2507d3e69a04b2fec1e'
2024-06-14 00:35:49,589 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:35:49,597 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Archive status) 97e479b717e34179eceea2507d3e69a04b2fec1e'
2024-06-14 00:35:49,688 [     scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-06-14 00:35:49,691 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-14 00:35:49,697 [     scc.git] DEBUG  omeroweb/webclient/static/webclient/javascript/ome.tree.js     |  3 +++
2024-06-14 00:35:49,698 [     scc.git] DEBUG  .../webclient/annotations/includes/core_metadata.html          |  6 ++++++
2024-06-14 00:35:49,698 [     scc.git] DEBUG  omeroweb/webclient/tree.py                                     | 10 ++++++++--
2024-06-14 00:35:49,698 [     scc.git] DEBUG  omeroweb/webgateway/marshal.py                                 |  1 +
2024-06-14 00:35:49,698 [     scc.git] DEBUG  4 files changed, 18 insertions(+), 2 deletions(-)
2024-06-14 00:35:49,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:35:49,999 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...575f7bbc72aad997963937297f08156ca6f7dd5e'
2024-06-14 00:35:50,009 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:35:50,018 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 558 (Update readme) 575f7bbc72aad997963937297f08156ca6f7dd5e'
2024-06-14 00:35:50,069 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-14 00:35:50,076 [     scc.git] DEBUG  README.rst | 42 +++++++++++++++++++++---------------------
2024-06-14 00:35:50,076 [     scc.git] DEBUG  1 file changed, 21 insertions(+), 21 deletions(-)
2024-06-14 00:35:50,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:35:50,408 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...f92a4e2764982ace46474a82af4ad25bee9d8823'
2024-06-14 00:35:50,416 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:35:50,421 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 560 (linkify supports urls that include $ character) f92a4e2764982ace46474a82af4ad25bee9d8823'
2024-06-14 00:35:50,456 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-14 00:35:50,460 [     scc.git] DEBUG  omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +-
2024-06-14 00:35:50,460 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 1 deletion(-)
2024-06-14 00:35:50,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:35:50,811 [     scc.git] DEBUG Calling 'git submodule update'
2024-06-14 00:35:50,861 [     scc.git] DEBUG Get sha1 of %s
2024-06-14 00:35:50,862 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-14 00:35:50,868 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-14 00:35:50,912 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-06-14 00:35:50,924 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fb49853c370> has no local changes
2024-06-14 00:35:50,924 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-web
Excluded PRs:
  - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft)
  - PR 535 will-moore 'Initial working browser history' (stage: draft)
  - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.

Merged PRs:
  - PR 527 will-moore 'Add some initial CSP settings to test'
  - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
  - PR 555 chris-allan 'Archive status'
  - PR 558 jburel 'Update readme'
  - PR 560 will-moore 'linkify supports urls that include $ character'

Generated by OMERO-python-superbuild-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/90/)'
2024-06-14 00:35:50,937 [     scc.git] DEBUG [detached HEAD 1eddfb802] merge master -Dorg -Ssuccess-only
2024-06-14 00:35:50,937 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-14 00:35:50,937 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-14 00:35:51,012 [  scc.config] DEBUG Found submodule.omero-dropbox.url
2024-06-14 00:35:51,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:35:51,245 [  scc.config] DEBUG Found submodule.omero-marshal.url
2024-06-14 00:35:51,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:35:51,665 [  scc.config] DEBUG Found submodule.omero-py.url
2024-06-14 00:35:52,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:35:52,070 [  scc.config] DEBUG Found submodule.omero-scripts.url
2024-06-14 00:35:52,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:35:52,499 [  scc.config] DEBUG Found submodule.omero-web.url
2024-06-14 00:35:52,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-14 00:35:52,958 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-06-14 00:35:52,995 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fb499ee02e0> has local changes
2024-06-14 00:35:52,995 [     scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-python-superbuild
Already up to date.


Repository: ome/omero-dropbox
Already up to date.

Merged PRs:
  - PR 16 joshmoore 'Review all instances of whitelist/blacklist'

Repository: ome/omero-marshal
Excluded PRs:
  - PR 34 chris-allan 'Initial support for Event' (exclude comment)
  - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.

Merged PRs:
  - PR 69 will-moore 'Roi encoder allows Shape None'

Repository: ome/omero-py
Excluded PRs:
  - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
  - PR 387 will-moore 'Numpy pixels type' (label: exclude)
  - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
  - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
  - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
  - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.

Merged PRs:
  - PR 199 joshmoore 'user: allow setting default group'
  - PR 207 manics 'BlitzGateway.connect raise on error'
  - PR 266 joshmoore 'errors: use raise_error from cli plugins'
  - PR 299 joshmoore 'Add parents and children to omero obj'
  - PR 332 jburel 'Build conda'
  - PR 337 will-moore 'bulk.yml depth is passed to xargs'
  - PR 391 joshmoore 'Add jstack command'
  - PR 408 jburel 'remove deprecated method'

Repository: ome/omero-scripts
Excluded PRs:
  - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
  - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
  - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
  - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.

Conflicting PRs (not included):
  - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'

Repository: ome/omero-web
Excluded PRs:
  - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft)
  - PR 535 will-moore 'Initial working browser history' (stage: draft)
  - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.

Merged PRs:
  - PR 527 will-moore 'Add some initial CSP settings to test'
  - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
  - PR 555 chris-allan 'Archive status'
  - PR 558 jburel 'Update readme'
  - PR 560 will-moore 'linkify supports urls that include $ character'

Generated by OMERO-python-superbuild-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/90/)'
2024-06-14 00:35:53,007 [     scc.git] DEBUG [detached HEAD 70231fb] merge master -Dorg -Ssuccess-only
2024-06-14 00:35:53,008 [   scc.merge] INFO  Repository: ome/omero-python-superbuild
2024-06-14 00:35:53,008 [     scc.git] DEBUG  6 files changed, 10 insertions(+), 10 deletions(-)
2024-06-14 00:35:53,008 [   scc.merge] INFO  Already up to date.
2024-06-14 00:35:53,008 [   scc.merge] INFO  
2024-06-14 00:35:53,008 [   scc.merge] INFO  
2024-06-14 00:35:53,008 [   scc.merge] INFO  Repository: ome/omero-dropbox
2024-06-14 00:35:53,008 [   scc.merge] INFO  Already up to date.
2024-06-14 00:35:53,008 [   scc.merge] INFO  
2024-06-14 00:35:53,008 [   scc.merge] INFO  Merged PRs:
2024-06-14 00:35:53,008 [   scc.merge] INFO    - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-06-14 00:35:53,008 [   scc.merge] INFO  
2024-06-14 00:35:53,008 [   scc.merge] INFO  Repository: ome/omero-marshal
2024-06-14 00:35:53,008 [   scc.merge] INFO  Excluded PRs:
2024-06-14 00:35:53,008 [   scc.merge] INFO    - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-06-14 00:35:53,008 [   scc.merge] INFO    - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-06-14 00:35:53,008 [   scc.merge] INFO  Already up to date.
2024-06-14 00:35:53,008 [   scc.merge] INFO  
2024-06-14 00:35:53,008 [   scc.merge] INFO  Merged PRs:
2024-06-14 00:35:53,008 [   scc.merge] INFO    - PR 69 will-moore 'Roi encoder allows Shape None'
2024-06-14 00:35:53,008 [   scc.merge] INFO  
2024-06-14 00:35:53,008 [   scc.merge] INFO  Repository: ome/omero-py
2024-06-14 00:35:53,009 [   scc.merge] INFO  Excluded PRs:
2024-06-14 00:35:53,009 [   scc.merge] INFO    - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-06-14 00:35:53,009 [   scc.merge] INFO    - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-06-14 00:35:53,009 [   scc.merge] INFO    - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
2024-06-14 00:35:53,009 [   scc.merge] INFO    - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-06-14 00:35:53,009 [   scc.merge] INFO    - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-06-14 00:35:53,009 [   scc.merge] INFO    - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-06-14 00:35:53,009 [   scc.merge] INFO  Already up to date.
2024-06-14 00:35:53,009 [   scc.merge] INFO  
2024-06-14 00:35:53,009 [   scc.merge] INFO  Merged PRs:
2024-06-14 00:35:53,009 [   scc.merge] INFO    - PR 199 joshmoore 'user: allow setting default group'
2024-06-14 00:35:53,009 [   scc.merge] INFO    - PR 207 manics 'BlitzGateway.connect raise on error'
2024-06-14 00:35:53,009 [   scc.merge] INFO    - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-06-14 00:35:53,009 [   scc.merge] INFO    - PR 299 joshmoore 'Add parents and children to omero obj'
2024-06-14 00:35:53,009 [   scc.merge] INFO    - PR 332 jburel 'Build conda'
2024-06-14 00:35:53,009 [   scc.merge] INFO    - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-06-14 00:35:53,009 [   scc.merge] INFO    - PR 391 joshmoore 'Add jstack command'
2024-06-14 00:35:53,009 [   scc.merge] INFO    - PR 408 jburel 'remove deprecated method'
2024-06-14 00:35:53,009 [   scc.merge] INFO  
2024-06-14 00:35:53,009 [   scc.merge] INFO  Repository: ome/omero-scripts
2024-06-14 00:35:53,009 [   scc.merge] INFO  Excluded PRs:
2024-06-14 00:35:53,009 [   scc.merge] INFO    - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-06-14 00:35:53,009 [   scc.merge] INFO    - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-06-14 00:35:53,009 [   scc.merge] INFO    - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-06-14 00:35:53,009 [   scc.merge] INFO    - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-06-14 00:35:53,009 [   scc.merge] INFO  Already up to date.
2024-06-14 00:35:53,009 [   scc.merge] INFO  
2024-06-14 00:35:53,010 [   scc.merge] INFO  Conflicting PRs (not included):
2024-06-14 00:35:53,010 [   scc.merge] INFO    - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-06-14 00:35:53,010 [   scc.merge] INFO  
2024-06-14 00:35:53,010 [   scc.merge] INFO  Repository: ome/omero-web
2024-06-14 00:35:53,010 [   scc.merge] INFO  Excluded PRs:
2024-06-14 00:35:53,010 [   scc.merge] INFO    - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft)
2024-06-14 00:35:53,010 [   scc.merge] INFO    - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-06-14 00:35:53,010 [   scc.merge] INFO    - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-06-14 00:35:53,010 [   scc.merge] INFO  Already up to date.
2024-06-14 00:35:53,010 [   scc.merge] INFO  
2024-06-14 00:35:53,010 [   scc.merge] INFO  Merged PRs:
2024-06-14 00:35:53,010 [   scc.merge] INFO    - PR 527 will-moore 'Add some initial CSP settings to test'
2024-06-14 00:35:53,010 [   scc.merge] INFO    - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-06-14 00:35:53,010 [   scc.merge] INFO    - PR 555 chris-allan 'Archive status'
2024-06-14 00:35:53,010 [   scc.merge] INFO    - PR 558 jburel 'Update readme'
2024-06-14 00:35:53,010 [   scc.merge] INFO    - PR 560 will-moore 'linkify supports urls that include $ character'
2024-06-14 00:35:53,010 [   scc.merge] INFO  
2024-06-14 00:35:53,010 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-06-14 00:35:53,010 [     scc.git] DEBUG Calling 'git remote'
2024-06-14 00:35:53,016 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-06-14 00:35:53,017 [     scc.git] DEBUG Calling 'git remote'
2024-06-14 00:35:53,023 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-14 00:35:53,023 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-06-14 00:35:53,023 [     scc.git] DEBUG Calling 'git remote'
2024-06-14 00:35:53,028 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-14 00:35:53,029 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-06-14 00:35:53,029 [     scc.git] DEBUG Calling 'git remote'
2024-06-14 00:35:53,034 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-14 00:35:53,034 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-06-14 00:35:53,034 [     scc.git] DEBUG Calling 'git remote'
2024-06-14 00:35:53,039 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-06-14 00:35:53,039 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-06-14 00:35:53,040 [     scc.git] DEBUG Calling 'git remote'
2024-06-14 00:35:53,045 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
    download_blitz_target()
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
    resp = urlopen(loc)
  File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
    return opener.open(url, data, timeout)
  File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
    response = meth(req, response)
  File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
    response = self.parent.error(
  File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
    return self._call_chain(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
    result = func(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
    raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
    download_blitz_target()
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
    resp = urlopen(loc)
  File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
    return opener.open(url, data, timeout)
  File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
    response = meth(req, response)
  File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
    response = self.parent.error(
  File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
    return self._call_chain(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
    result = func(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
    raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from d3a65421
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 5a90893
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 9c94fd493
nothing to commit, working tree clean
HEAD detached from 05f561e
nothing to commit, working tree clean
2024-06-14 00:36:24,159 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS