Started by upstream project "Trigger" build number 125 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision af267baf738bf563fa6d26d1f37a3717d679c59f The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/e9d96de4efbb3e39a2ce24824e54985c7c2760a6ed46c5415ea0aa1fd1e18d41/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision af267baf738bf563fa6d26d1f37a3717d679c59f (master) > git config core.sparsecheckout # timeout=10 > git checkout -f af267baf738bf563fa6d26d1f37a3717d679c59f # timeout=10 Commit message: "Merge pull request #19 from will-moore/readme" > git rev-list --no-walk af267baf738bf563fa6d26d1f37a3717d679c59f # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.52.0' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision b68c3cf06205611a43f501104408df0df16649d6 (refs/remotes/origin/master) Commit message: "Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c" > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b68c3cf06205611a43f501104408df0df16649d6 # timeout=10 > git rev-list --no-walk b68c3cf06205611a43f501104408df0df16649d6 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 106 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + tar -zxf - + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.2.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.2.1 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.10.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.34.2-py3-none-any.whl.metadata (4.8 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.15.1-py3-none-any.whl.metadata (3.5 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.16.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-50.0.2-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (4.4 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.1.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.5 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.11-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.5.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (46 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.20-py3-none-any.whl.metadata (7.2 kB) Collecting certifi>=2023.5.7 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.7.22-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.10.0-py3-none-any.whl (455 kB) Using cached pyjwt-2.15.1-py3-none-any.whl (33 kB) Using cached cryptography-50.0.2-cp311-abi3-manylinux_2_34_x86_64.whl (4.8 MB) Using cached cffi-2.1.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (217 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.34.2-py3-none-any.whl (73 kB) Using cached charset_normalizer-3.5.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (269 kB) Using cached idna-3.20-py3-none-any.whl (69 kB) Using cached certifi-2026.7.22-py3-none-any.whl (136 kB) Using cached typing_extensions-4.16.0-py3-none-any.whl (45 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.11-py3-none-any.whl (51 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.10.0 PyYAML-6.0.3 certifi-2026.7.22 cffi-2.1.1 charset_normalizer-3.5.2 cryptography-50.0.2 future-1.0.0 idna-3.20 pycparser-3.11 pyjwt-2.15.1 pynacl-1.6.2 requests-2.34.2 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.16.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-10-10 23:20:49,782 [ scc.config] DEBUG Found github.token 2026-10-10 23:20:49,784 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-10-10 23:20:50,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:20:50,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:20:50,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-10-10 23:20:50,909 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 00:10 2026-10-10 23:20:50,909 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-10-10 23:20:50,919 [ scc.git] DEBUG Check current status 2026-10-10 23:20:50,919 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-10-10 23:20:50,949 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c 2026-10-10 23:20:50,950 [ scc.git] DEBUG Calling 'git submodule status' 2026-10-10 23:20:51,099 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2026-10-10 23:20:51,155 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2026-10-10 23:20:51,231 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5) 2026-10-10 23:20:51,270 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2026-10-10 23:20:51,378 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2026-10-10 23:20:51,388 [ scc.config] DEBUG Found remote.origin.url 2026-10-10 23:20:51,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2026-10-10 23:20:52,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-10-10 23:20:52,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-10-10 23:20:53,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-10-10 23:20:53,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-10-10 23:20:53,579 [ scc.git] DEBUG Resetting... 2026-10-10 23:20:53,579 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-10-10 23:20:53,719 [ scc.git] DEBUG HEAD is now at b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c 2026-10-10 23:20:53,720 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-10-10 23:20:54,078 [ scc.git] DEBUG Check current status 2026-10-10 23:20:54,078 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-10-10 23:20:54,094 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c 2026-10-10 23:20:54,095 [ scc.git] DEBUG Calling 'git submodule status' 2026-10-10 23:20:54,243 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2026-10-10 23:20:54,273 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2026-10-10 23:20:54,327 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5) 2026-10-10 23:20:54,363 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2026-10-10 23:20:54,401 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2026-10-10 23:20:54,402 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-10-10 23:20:54,402 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-10-10 23:20:54,402 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-10-10 23:20:54,402 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-10-10 23:20:54,402 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-10-10 23:20:54,402 [ scc.repo] DEBUG ## PRs found: 2026-10-10 23:20:54,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2026-10-10 23:20:55,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None 2026-10-10 23:20:55,214 [ scc.repo] DEBUG # ... Include label: dependencies 2026-10-10 23:20:55,214 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`' 2026-10-10 23:20:55,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None 2026-10-10 23:20:55,723 [ scc.repo] DEBUG # ... Include label: dependencies 2026-10-10 23:20:55,723 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`' 2026-10-10 23:20:56,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None 2026-10-10 23:20:56,267 [ scc.repo] DEBUG # ... Include label: dependencies 2026-10-10 23:20:56,267 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`' 2026-10-10 23:20:56,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None 2026-10-10 23:20:56,791 [ scc.repo] DEBUG # ... Include label: dependencies 2026-10-10 23:20:56,791 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`' 2026-10-10 23:20:56,791 [ scc.repo] DEBUG ## Branches found: 2026-10-10 23:20:56,792 [ scc.git] DEBUG Get sha1 of %s 2026-10-10 23:20:56,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:20:56,804 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-10-10 23:20:56,821 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-10-10 23:20:56,821 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-10-10 23:20:56,839 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-10-10 23:20:56,889 [ scc.git] DEBUG Already up to date. 2026-10-10 23:20:56,889 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head' 2026-10-10 23:20:57,318 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2026-10-10 23:20:57,318 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD 2026-10-10 23:20:57,347 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2026-10-10 23:20:57,762 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2026-10-10 23:20:57,762 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2026-10-10 23:20:57,789 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head' 2026-10-10 23:20:58,198 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2026-10-10 23:20:58,198 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD 2026-10-10 23:20:58,225 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head' 2026-10-10 23:20:58,642 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2026-10-10 23:20:58,642 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD 2026-10-10 23:20:58,669 [ scc.git] DEBUG ## Unique users: [] 2026-10-10 23:20:58,669 [ scc.git] DEBUG Get sha1 of %s 2026-10-10 23:20:58,669 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:20:58,679 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c' 2026-10-10 23:20:58,702 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:20:58,711 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c' 2026-10-10 23:20:58,951 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-10 23:20:59,012 [ scc.git] DEBUG omero-marshal | 2 +- 2026-10-10 23:20:59,012 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-10-10 23:20:59,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:20:59,188 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa' 2026-10-10 23:20:59,213 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:20:59,223 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa' 2026-10-10 23:20:59,526 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-10 23:20:59,583 [ scc.git] DEBUG omero-web | 2 +- 2026-10-10 23:20:59,583 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-10-10 23:20:59,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:20:59,751 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf' 2026-10-10 23:20:59,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:20:59,788 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf' 2026-10-10 23:21:00,098 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-10 23:21:00,162 [ scc.git] DEBUG omero-dropbox | 2 +- 2026-10-10 23:21:00,162 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-10-10 23:21:00,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:21:00,354 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d' 2026-10-10 23:21:00,383 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:21:00,392 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d' 2026-10-10 23:21:00,695 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-10 23:21:00,762 [ scc.git] DEBUG omero-py | 2 +- 2026-10-10 23:21:00,762 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-10-10 23:21:00,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:21:00,965 [ scc.git] DEBUG Calling 'git submodule update' 2026-10-10 23:21:01,335 [ scc.git] DEBUG Submodule path 'omero-dropbox': checked out 'ac93ed4b4a139dd73b414ead55223071fc465de5' 2026-10-10 23:21:01,602 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c' 2026-10-10 23:21:02,168 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1' 2026-10-10 23:21:03,120 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b' 2026-10-10 23:21:03,121 [ scc.git] DEBUG Get sha1 of %s 2026-10-10 23:21:03,121 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:21:03,131 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-10-10 23:21:04,190 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7fe2c0f410> has no local changes 2026-10-10 23:21:04,190 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`' - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`' - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`' - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`' Generated by OMERO-python-superbuild-push#96 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/96/)' 2026-10-10 23:21:04,595 [ scc.git] DEBUG [detached HEAD a9d0eb1] merge master -Dorg -Snone 2026-10-10 23:21:04,596 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2026-10-10 23:21:04,596 [ scc.merge] INFO Already up to date. 2026-10-10 23:21:04,596 [ scc.merge] INFO 2026-10-10 23:21:04,596 [ scc.merge] INFO Merged PRs: 2026-10-10 23:21:04,596 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`' 2026-10-10 23:21:04,596 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`' 2026-10-10 23:21:04,596 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`' 2026-10-10 23:21:04,596 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`' 2026-10-10 23:21:04,596 [ scc.merge] INFO 2026-10-10 23:21:04,597 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-10-10 23:21:04,597 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Submodule path 'omero-marshal': checked out 'f8ff1c2e439f0599d96423b7f64898864548ba9f' Submodule path 'omero-py': checked out '8990768db971d03ea5dafabc177aab910f567c68' Submodule path 'omero-scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Submodule path 'omero-web': checked out 'bf6d9d9236add51d41b100c8bc2cff6bdc917389' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2026-10-10 23:21:11,371 [ scc.config] DEBUG Found github.token 2026-10-10 23:21:11,373 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-10-10 23:21:11,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:21:12,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:21:12,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-10-10 23:21:12,587 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 00:10 2026-10-10 23:21:12,587 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-10-10 23:21:12,600 [ scc.git] DEBUG Check current status 2026-10-10 23:21:12,601 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-10-10 23:21:12,621 [ scc.git] DEBUG a9d0eb1 merge master -Dorg -Snone 2026-10-10 23:21:12,622 [ scc.git] DEBUG Calling 'git submodule status' 2026-10-10 23:21:12,748 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4) 2026-10-10 23:21:12,778 [ scc.git] DEBUG +f8ff1c2e439f0599d96423b7f64898864548ba9f omero-marshal (v0.9.1-3-gf8ff1c2) 2026-10-10 23:21:12,841 [ scc.git] DEBUG +8990768db971d03ea5dafabc177aab910f567c68 omero-py (v5.23.0-37-g8990768d) 2026-10-10 23:21:12,874 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 omero-scripts (v5.10.0-1-g5b4d768) 2026-10-10 23:21:12,920 [ scc.git] DEBUG +bf6d9d9236add51d41b100c8bc2cff6bdc917389 omero-web (v5.33.2-1-gbf6d9d923) 2026-10-10 23:21:12,932 [ scc.config] DEBUG Found remote.origin.url 2026-10-10 23:21:12,932 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-10-10 23:21:12,935 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2026-10-10 23:21:13,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2026-10-10 23:21:13,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-10-10 23:21:14,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-10-10 23:21:14,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-10-10 23:21:15,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-10-10 23:21:15,181 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-10 23:21:15,300 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2026-10-10 23:21:15,300 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-10-10 23:21:15,315 [ scc.git] DEBUG Check current status 2026-10-10 23:21:15,315 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-10-10 23:21:15,340 [ scc.git] DEBUG ac93ed4 Merge pull request #26 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 2026-10-10 23:21:15,341 [ scc.git] DEBUG Calling 'git submodule status' 2026-10-10 23:21:15,456 [ scc.config] DEBUG Found remote.origin.url 2026-10-10 23:21:15,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2026-10-10 23:21:16,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-10-10 23:21:16,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-10-10 23:21:17,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-10-10 23:21:17,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-10-10 23:21:17,689 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-10 23:21:17,806 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-10 23:21:17,807 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2026-10-10 23:21:17,807 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-10-10 23:21:17,819 [ scc.git] DEBUG Check current status 2026-10-10 23:21:17,819 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-10-10 23:21:17,838 [ scc.git] DEBUG f8ff1c2 Merge pull request #90 from sbesson/python_3.9_removal 2026-10-10 23:21:17,839 [ scc.git] DEBUG Calling 'git submodule status' 2026-10-10 23:21:17,956 [ scc.config] DEBUG Found remote.origin.url 2026-10-10 23:21:18,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2026-10-10 23:21:18,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-10-10 23:21:19,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-10-10 23:21:19,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-10-10 23:21:20,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-10-10 23:21:20,171 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-10 23:21:20,276 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-10 23:21:20,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2026-10-10 23:21:20,277 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-10-10 23:21:20,288 [ scc.git] DEBUG Check current status 2026-10-10 23:21:20,288 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-10-10 23:21:20,318 [ scc.git] DEBUG 8990768d Merge pull request #489 from will-moore/getObjects_Annotations 2026-10-10 23:21:20,322 [ scc.git] DEBUG Calling 'git submodule status' 2026-10-10 23:21:20,435 [ scc.config] DEBUG Found remote.origin.url 2026-10-10 23:21:20,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2026-10-10 23:21:21,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-10-10 23:21:21,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-10-10 23:21:22,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-10-10 23:21:22,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-10-10 23:21:22,633 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-10 23:21:22,743 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-10 23:21:22,744 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2026-10-10 23:21:22,744 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-10-10 23:21:22,756 [ scc.git] DEBUG Check current status 2026-10-10 23:21:22,756 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-10-10 23:21:22,776 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-10-10 23:21:22,777 [ scc.git] DEBUG Calling 'git submodule status' 2026-10-10 23:21:22,905 [ scc.config] DEBUG Found remote.origin.url 2026-10-10 23:21:22,906 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-10-10 23:21:23,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2026-10-10 23:21:23,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-10-10 23:21:24,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-10-10 23:21:24,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-10-10 23:21:25,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-10-10 23:21:25,221 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-10 23:21:25,346 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-10 23:21:25,346 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2026-10-10 23:21:25,346 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-10-10 23:21:25,360 [ scc.git] DEBUG Check current status 2026-10-10 23:21:25,361 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-10-10 23:21:25,404 [ scc.git] DEBUG bf6d9d923 Bump version: 5.33.2 → 5.33.3.dev0 2026-10-10 23:21:25,405 [ scc.git] DEBUG Calling 'git submodule status' 2026-10-10 23:21:25,541 [ scc.config] DEBUG Found remote.origin.url 2026-10-10 23:21:25,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2026-10-10 23:21:26,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-10-10 23:21:26,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-10-10 23:21:27,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-10-10 23:21:27,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-10-10 23:21:27,676 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-10 23:21:27,780 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-10 23:21:27,780 [ scc.git] DEBUG Resetting... 2026-10-10 23:21:27,780 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-10-10 23:21:27,936 [ scc.git] DEBUG HEAD is now at a9d0eb1 merge master -Dorg -Snone 2026-10-10 23:21:27,937 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-10-10 23:21:28,383 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c' 2026-10-10 23:21:29,169 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1' 2026-10-10 23:21:29,626 [ scc.git] DEBUG Submodule path 'omero-scripts': checked out '03b9116196e1a799dd18a666559613d912be01a5' 2026-10-10 23:21:30,943 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b' 2026-10-10 23:21:30,967 [ scc.git] DEBUG Check current status 2026-10-10 23:21:30,967 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-10-10 23:21:30,985 [ scc.git] DEBUG a9d0eb1 merge master -Dorg -Snone 2026-10-10 23:21:30,985 [ scc.git] DEBUG Calling 'git submodule status' 2026-10-10 23:21:31,148 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4) 2026-10-10 23:21:31,202 [ scc.git] DEBUG a3dd99b825ad44c9beadc38a8ae8ba94a155f62c omero-marshal (v0.9.0-18-ga3dd99b) 2026-10-10 23:21:31,272 [ scc.git] DEBUG b44120b5235b24db6dde315369ea1519bbeb30c1 omero-py (v5.21.2-3-gb44120b5) 2026-10-10 23:21:31,314 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2026-10-10 23:21:31,356 [ scc.git] DEBUG 675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b omero-web (v5.29.3-1-g675d57fd7) 2026-10-10 23:21:31,358 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-10-10 23:21:31,358 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-10-10 23:21:31,358 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-10-10 23:21:31,358 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-10-10 23:21:31,358 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-10-10 23:21:31,358 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-10-10 23:21:31,358 [ scc.repo] DEBUG ## PRs found: 2026-10-10 23:21:31,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2026-10-10 23:21:32,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None 2026-10-10 23:21:32,200 [ scc.repo] DEBUG # ... Include label: dependencies 2026-10-10 23:21:32,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None 2026-10-10 23:21:33,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-10 23:21:33,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None 2026-10-10 23:21:34,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?per_page=1 HTTP/1.1" 200 2 2026-10-10 23:21:34,361 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`' 2026-10-10 23:21:34,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None 2026-10-10 23:21:34,904 [ scc.repo] DEBUG # ... Include label: dependencies 2026-10-10 23:21:35,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None 2026-10-10 23:21:35,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-10 23:21:36,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None 2026-10-10 23:21:36,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/09050892c054f3697fd3604d05ce68b65af6dedf?per_page=1 HTTP/1.1" 200 2 2026-10-10 23:21:36,930 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`' 2026-10-10 23:21:37,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None 2026-10-10 23:21:37,454 [ scc.repo] DEBUG # ... Include label: dependencies 2026-10-10 23:21:38,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None 2026-10-10 23:21:38,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-10 23:21:39,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None 2026-10-10 23:21:39,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/7632acc02b92ba91ed954701ac52de2732a56daa?per_page=1 HTTP/1.1" 200 2 2026-10-10 23:21:39,667 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`' 2026-10-10 23:21:40,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None 2026-10-10 23:21:40,186 [ scc.repo] DEBUG # ... Include label: dependencies 2026-10-10 23:21:40,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None 2026-10-10 23:21:41,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-10 23:21:41,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None 2026-10-10 23:21:42,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/e5077065e3781e634471b4828f120f18c16dad1c?per_page=1 HTTP/1.1" 200 2 2026-10-10 23:21:42,265 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`' 2026-10-10 23:21:42,265 [ scc.repo] DEBUG ## Branches found: 2026-10-10 23:21:42,265 [ scc.git] DEBUG Get sha1 of %s 2026-10-10 23:21:42,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:21:42,278 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-10-10 23:21:42,293 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-10-10 23:21:42,293 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-10-10 23:21:42,317 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-10-10 23:21:42,377 [ scc.git] DEBUG Already up to date. 2026-10-10 23:21:42,377 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head' 2026-10-10 23:21:42,817 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2026-10-10 23:21:42,817 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD 2026-10-10 23:21:42,846 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2026-10-10 23:21:43,280 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2026-10-10 23:21:43,280 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2026-10-10 23:21:43,303 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head' 2026-10-10 23:21:43,712 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2026-10-10 23:21:43,712 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD 2026-10-10 23:21:43,739 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head' 2026-10-10 23:21:44,171 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2026-10-10 23:21:44,171 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD 2026-10-10 23:21:44,195 [ scc.git] DEBUG ## Unique users: [] 2026-10-10 23:21:44,195 [ scc.git] DEBUG Get sha1 of %s 2026-10-10 23:21:44,195 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:21:44,206 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c' 2026-10-10 23:21:44,228 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:21:44,238 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c' 2026-10-10 23:21:44,295 [ scc.git] DEBUG Already up to date. 2026-10-10 23:21:44,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:21:44,484 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa' 2026-10-10 23:21:44,517 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:21:44,529 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa' 2026-10-10 23:21:44,590 [ scc.git] DEBUG Already up to date. 2026-10-10 23:21:44,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:21:44,911 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf' 2026-10-10 23:21:44,938 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:21:44,950 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf' 2026-10-10 23:21:45,008 [ scc.git] DEBUG Already up to date. 2026-10-10 23:21:45,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:21:45,337 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d' 2026-10-10 23:21:45,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:21:45,374 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d' 2026-10-10 23:21:45,427 [ scc.git] DEBUG Already up to date. 2026-10-10 23:21:45,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:21:45,778 [ scc.git] DEBUG Calling 'git submodule update' 2026-10-10 23:21:46,021 [ scc.git] DEBUG Get sha1 of %s 2026-10-10 23:21:46,021 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:21:46,031 [ scc.repo] DEBUG ## PRs found: 2026-10-10 23:21:46,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 2 2026-10-10 23:21:46,258 [ scc.repo] DEBUG ## Branches found: 2026-10-10 23:21:46,258 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2026-10-10 23:21:46,258 [ scc.git] DEBUG Get sha1 of %s 2026-10-10 23:21:46,258 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:21:46,275 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-10-10 23:21:46,291 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-10-10 23:21:46,291 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-10-10 23:21:46,310 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-10-10 23:21:46,364 [ scc.git] DEBUG Already up to date. 2026-10-10 23:21:46,364 [ scc.git] DEBUG ## Unique users: [] 2026-10-10 23:21:46,364 [ scc.git] DEBUG Get sha1 of %s 2026-10-10 23:21:46,364 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:21:46,381 [ scc.git] DEBUG Calling 'git submodule update' 2026-10-10 23:21:46,497 [ scc.git] DEBUG Get sha1 of %s 2026-10-10 23:21:46,497 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:21:46,509 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-10 23:21:46,611 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-10-10 23:21:46,662 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f067cc84190> has no local changes 2026-10-10 23:21:46,663 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Generated by OMERO-python-superbuild-push#96 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/96/)' 2026-10-10 23:21:46,796 [ scc.git] DEBUG [detached HEAD e01c3ed] merge master -Dorg -Ssuccess-only 2026-10-10 23:21:46,798 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-10 23:21:46,798 [ scc.repo] DEBUG ## PRs found: 2026-10-10 23:21:47,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2026-10-10 23:21:47,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2026-10-10 23:21:48,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2026-10-10 23:21:48,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2026-10-10 23:21:49,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2026-10-10 23:21:49,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2026-10-10 23:21:50,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2026-10-10 23:21:50,142 [ scc.repo] DEBUG ## Branches found: 2026-10-10 23:21:50,142 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2026-10-10 23:21:50,142 [ scc.git] DEBUG Get sha1 of %s 2026-10-10 23:21:50,142 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:21:50,157 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-10-10 23:21:50,172 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-10-10 23:21:50,172 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-10-10 23:21:50,214 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-10-10 23:21:50,450 [ scc.git] DEBUG Updating a3dd99b..f8ff1c2 2026-10-10 23:21:51,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/90 HTTP/1.1" 200 None 2026-10-10 23:21:51,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/89 HTTP/1.1" 200 None 2026-10-10 23:21:52,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/69 HTTP/1.1" 200 None 2026-10-10 23:21:53,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/88 HTTP/1.1" 200 None 2026-10-10 23:21:53,675 [ scc.git] DEBUG ## Unique users: [] 2026-10-10 23:21:53,675 [ scc.git] DEBUG Get sha1 of %s 2026-10-10 23:21:53,675 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:21:53,694 [ scc.git] DEBUG Calling 'git submodule update' 2026-10-10 23:21:53,822 [ scc.git] DEBUG Get sha1 of %s 2026-10-10 23:21:53,822 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:21:53,838 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-10 23:21:53,981 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-10-10 23:21:54,090 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f067cc9aad0> has no local changes 2026-10-10 23:21:54,090 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Updating a3dd99b..f8ff1c2 Previously merged: - PR 90 sbesson 'Remove Python 3.9 from the testing matrix' - PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step' - PR 69 will-moore 'Roi encoder allows Shape None' - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages' Generated by OMERO-python-superbuild-push#96 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/96/)' 2026-10-10 23:21:54,260 [ scc.git] DEBUG [detached HEAD ecfe2b1] merge master -Dorg -Ssuccess-only 2026-10-10 23:21:54,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-10 23:21:54,262 [ scc.repo] DEBUG ## PRs found: 2026-10-10 23:21:54,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2026-10-10 23:21:55,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None 2026-10-10 23:21:55,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None 2026-10-10 23:21:56,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None 2026-10-10 23:21:56,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459/comments HTTP/1.1" 200 None 2026-10-10 23:21:57,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None 2026-10-10 23:21:57,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-10 23:21:58,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-10-10 23:21:58,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None 2026-10-10 23:21:59,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/57c54f02b543e8f7da852c34a0ababf95562853d?per_page=1 HTTP/1.1" 200 None 2026-10-10 23:21:59,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:00,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/status HTTP/1.1" 200 None 2026-10-10 23:22:00,282 [ scc.repo] DEBUG - PR 459 Tom-TBT 'Wrapper improvements for ROIs' 2026-10-10 23:22:00,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2026-10-10 23:22:01,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2026-10-10 23:22:01,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:02,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-10 23:22:02,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:03,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2026-10-10 23:22:03,401 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2026-10-10 23:22:03,401 [ scc.repo] DEBUG ## Branches found: 2026-10-10 23:22:03,401 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2026-10-10 23:22:03,402 [ scc.git] DEBUG Get sha1 of %s 2026-10-10 23:22:03,402 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:22:03,419 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-10-10 23:22:03,435 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-10-10 23:22:03,435 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-10-10 23:22:03,853 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-10-10 23:22:04,393 [ scc.git] DEBUG Updating b44120b5..8990768d 2026-10-10 23:22:05,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/489 HTTP/1.1" 200 None 2026-10-10 23:22:05,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/498 HTTP/1.1" 200 None 2026-10-10 23:22:06,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/495 HTTP/1.1" 200 None 2026-10-10 23:22:07,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/496 HTTP/1.1" 200 None 2026-10-10 23:22:08,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/199 HTTP/1.1" 200 None 2026-10-10 23:22:09,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/492 HTTP/1.1" 200 None 2026-10-10 23:22:10,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/493 HTTP/1.1" 200 None 2026-10-10 23:22:10,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/491 HTTP/1.1" 200 None 2026-10-10 23:22:11,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/490 HTTP/1.1" 200 None 2026-10-10 23:22:12,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/483 HTTP/1.1" 200 None 2026-10-10 23:22:12,582 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2026-10-10 23:22:13,182 [ scc.git] DEBUG From https://github.com/ome/omero-py 2026-10-10 23:22:13,182 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2026-10-10 23:22:13,210 [ scc.git] DEBUG Calling 'git fetch origin pull/459/head' 2026-10-10 23:22:14,065 [ scc.git] DEBUG From https://github.com/ome/omero-py 2026-10-10 23:22:14,065 [ scc.git] DEBUG * branch refs/pull/459/head -> FETCH_HEAD 2026-10-10 23:22:14,102 [ scc.git] DEBUG ## Unique users: [] 2026-10-10 23:22:14,102 [ scc.git] DEBUG Get sha1 of %s 2026-10-10 23:22:14,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:22:14,124 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2026-10-10 23:22:14,202 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:22:14,219 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2026-10-10 23:22:14,595 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2026-10-10 23:22:14,681 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-10 23:22:14,769 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2026-10-10 23:22:14,769 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2026-10-10 23:22:14,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:22:14,957 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...57c54f02b543e8f7da852c34a0ababf95562853d' 2026-10-10 23:22:15,062 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:22:15,079 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 459 (Wrapper improvements for ROIs) 57c54f02b543e8f7da852c34a0ababf95562853d' 2026-10-10 23:22:15,402 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2026-10-10 23:22:15,484 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-10 23:22:15,569 [ scc.git] DEBUG src/omero/gateway/__init__.py | 45 ++++++++++++++++++++++++++++++++++++------- 2026-10-10 23:22:15,569 [ scc.git] DEBUG 1 file changed, 38 insertions(+), 7 deletions(-) 2026-10-10 23:22:15,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:22:15,760 [ scc.git] DEBUG Calling 'git submodule update' 2026-10-10 23:22:15,913 [ scc.git] DEBUG Get sha1 of %s 2026-10-10 23:22:15,913 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:22:15,930 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-10 23:22:16,059 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-10-10 23:22:16,165 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f067ccaad10> has no local changes 2026-10-10 23:22:16,165 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) Updating b44120b5..8990768d Previously merged: - PR 489 will-moore 'Add more opts support for getObjects('Annotation')' - PR 498 sbesson 'Upgrade GitHub actions' - PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo' - PR 496 will-moore 'Fix ice-3.6 download link in README' - PR 199 joshmoore 'user: allow setting default group' - PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository' - PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse' - PR 491 kkoz 'First pass at better cleanse dry-run output' - PR 490 sbesson 'Remove support from Python 3.9' - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()' Merged PRs: - PR 391 joshmoore 'Add jstack command' - PR 459 Tom-TBT 'Wrapper improvements for ROIs' Generated by OMERO-python-superbuild-push#96 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/96/)' 2026-10-10 23:22:16,360 [ scc.git] DEBUG [detached HEAD c1770c81] merge master -Dorg -Ssuccess-only 2026-10-10 23:22:16,366 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-10 23:22:16,366 [ scc.git] INFO Overriding base-branch from master to develop 2026-10-10 23:22:16,366 [ scc.repo] DEBUG ## PRs found: 2026-10-10 23:22:16,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2026-10-10 23:22:17,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/235 HTTP/1.1" 200 None 2026-10-10 23:22:17,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/235/comments HTTP/1.1" 200 None 2026-10-10 23:22:18,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/9f03fdbd8237f5cdbffeac0a45869ee4bd570327?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:18,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/9f03fdbd8237f5cdbffeac0a45869ee4bd570327/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-10 23:22:19,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/9f03fdbd8237f5cdbffeac0a45869ee4bd570327/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-10-10 23:22:19,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/9f03fdbd8237f5cdbffeac0a45869ee4bd570327?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:20,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/9f03fdbd8237f5cdbffeac0a45869ee4bd570327?per_page=1 HTTP/1.1" 200 2 2026-10-10 23:22:20,300 [ scc.repo] DEBUG - PR 235 will-moore 'Batch roi export tags' 2026-10-10 23:22:20,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/232 HTTP/1.1" 200 None 2026-10-10 23:22:21,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:21,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-10 23:22:22,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-10-10 23:22:22,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:23,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/e190baa635f40826befc84321719243092ee849f?per_page=1 HTTP/1.1" 200 2 2026-10-10 23:22:23,386 [ scc.repo] DEBUG - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' 2026-10-10 23:22:23,386 [ scc.repo] DEBUG ## Branches found: 2026-10-10 23:22:23,386 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2026-10-10 23:22:23,387 [ scc.git] DEBUG Get sha1 of %s 2026-10-10 23:22:23,387 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:22:23,403 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-10-10 23:22:23,423 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-10-10 23:22:23,423 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-10-10 23:22:23,463 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-10-10 23:22:23,720 [ scc.git] DEBUG Updating 03b9116..5b4d768 2026-10-10 23:22:24,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-10-10 23:22:25,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-10-10 23:22:25,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-10-10 23:22:26,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-10-10 23:22:26,927 [ scc.git] DEBUG Calling 'git fetch origin pull/232/head' 2026-10-10 23:22:27,439 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2026-10-10 23:22:27,439 [ scc.git] DEBUG * branch refs/pull/232/head -> FETCH_HEAD 2026-10-10 23:22:27,464 [ scc.git] DEBUG Calling 'git fetch origin pull/235/head' 2026-10-10 23:22:28,084 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2026-10-10 23:22:28,084 [ scc.git] DEBUG * branch refs/pull/235/head -> FETCH_HEAD 2026-10-10 23:22:28,112 [ scc.git] DEBUG ## Unique users: [] 2026-10-10 23:22:28,112 [ scc.git] DEBUG Get sha1 of %s 2026-10-10 23:22:28,112 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:22:28,127 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e190baa635f40826befc84321719243092ee849f' 2026-10-10 23:22:28,162 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:22:28,177 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 232 (Add Auto header detection to `Populate_Metadata.py`) e190baa635f40826befc84321719243092ee849f' 2026-10-10 23:22:28,417 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-10 23:22:28,480 [ scc.git] DEBUG omero/import_scripts/Populate_Metadata.py | 26 ++++++++++++++++++++++++-- 2026-10-10 23:22:28,481 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2026-10-10 23:22:28,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:22:28,667 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9f03fdbd8237f5cdbffeac0a45869ee4bd570327' 2026-10-10 23:22:28,724 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:22:28,737 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 235 (Batch roi export tags) 9f03fdbd8237f5cdbffeac0a45869ee4bd570327' 2026-10-10 23:22:29,040 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-10 23:22:29,154 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 48 +++++++++++++++++++++----------- 2026-10-10 23:22:29,154 [ scc.git] DEBUG test/integration/test_export_scripts.py | 11 ++++++-- 2026-10-10 23:22:29,154 [ scc.git] DEBUG 2 files changed, 40 insertions(+), 19 deletions(-) 2026-10-10 23:22:29,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:22:29,348 [ scc.git] DEBUG Calling 'git submodule update' 2026-10-10 23:22:29,494 [ scc.git] DEBUG Get sha1 of %s 2026-10-10 23:22:29,494 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:22:29,514 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-10 23:22:29,650 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-10-10 23:22:29,734 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f067cd2ae10> has no local changes 2026-10-10 23:22:29,735 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Updating 03b9116..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' Merged PRs: - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' - PR 235 will-moore 'Batch roi export tags' Generated by OMERO-python-superbuild-push#96 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/96/)' 2026-10-10 23:22:29,905 [ scc.git] DEBUG [detached HEAD 03dddbf] merge master -Dorg -Ssuccess-only 2026-10-10 23:22:29,907 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-10 23:22:29,907 [ scc.repo] DEBUG ## PRs found: 2026-10-10 23:22:30,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2026-10-10 23:22:30,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/694 HTTP/1.1" 200 None 2026-10-10 23:22:31,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/828d8d00e3a69b213a069ac150eb7ce1634d002d?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:32,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/828d8d00e3a69b213a069ac150eb7ce1634d002d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-10 23:22:32,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/828d8d00e3a69b213a069ac150eb7ce1634d002d/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-10-10 23:22:33,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/828d8d00e3a69b213a069ac150eb7ce1634d002d?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:33,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/828d8d00e3a69b213a069ac150eb7ce1634d002d?per_page=1 HTTP/1.1" 200 None 2026-10-10 23:22:34,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/828d8d00e3a69b213a069ac150eb7ce1634d002d?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:34,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/828d8d00e3a69b213a069ac150eb7ce1634d002d/status HTTP/1.1" 200 None 2026-10-10 23:22:34,653 [ scc.repo] DEBUG - PR 694 knabar 'Fix exception when ann.ns is null' 2026-10-10 23:22:35,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/693 HTTP/1.1" 200 None 2026-10-10 23:22:35,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/687 HTTP/1.1" 200 None 2026-10-10 23:22:36,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/687/comments HTTP/1.1" 200 None 2026-10-10 23:22:36,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684 HTTP/1.1" 200 None 2026-10-10 23:22:37,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684/comments HTTP/1.1" 200 None 2026-10-10 23:22:37,411 [ scc.repo] DEBUG # ... Include label: include 2026-10-10 23:22:37,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:38,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-10 23:22:39,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-10-10 23:22:39,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:39,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?per_page=1 HTTP/1.1" 200 None 2026-10-10 23:22:40,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:40,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/status HTTP/1.1" 200 None 2026-10-10 23:22:40,960 [ scc.repo] DEBUG - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"' 2026-10-10 23:22:41,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682 HTTP/1.1" 200 None 2026-10-10 23:22:42,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682/comments HTTP/1.1" 200 None 2026-10-10 23:22:42,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:43,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-10 23:22:43,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-10-10 23:22:44,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:44,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/2e6b8720dd1d8506d474bf40e282184270ae2634?per_page=1 HTTP/1.1" 200 None 2026-10-10 23:22:45,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:45,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/status HTTP/1.1" 200 None 2026-10-10 23:22:45,581 [ scc.repo] DEBUG - PR 682 will-moore 'Initial support for JSON api /annotations endpoint' 2026-10-10 23:22:46,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/677 HTTP/1.1" 200 None 2026-10-10 23:22:46,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/677/comments HTTP/1.1" 200 None 2026-10-10 23:22:47,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:47,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-10 23:22:48,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-10-10 23:22:48,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:49,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?per_page=1 HTTP/1.1" 200 None 2026-10-10 23:22:49,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:50,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/status HTTP/1.1" 200 None 2026-10-10 23:22:50,161 [ scc.repo] DEBUG - PR 677 will-moore 'Add table_histogram endpoint' 2026-10-10 23:22:50,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/644 HTTP/1.1" 200 None 2026-10-10 23:22:51,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/644/comments HTTP/1.1" 200 None 2026-10-10 23:22:51,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:52,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-10 23:22:52,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-10-10 23:22:53,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:53,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?per_page=1 HTTP/1.1" 200 None 2026-10-10 23:22:54,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:54,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/status HTTP/1.1" 200 None 2026-10-10 23:22:54,828 [ scc.repo] DEBUG - PR 644 jo-mueller 'Add some install instructions for windows' 2026-10-10 23:22:55,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643 HTTP/1.1" 200 None 2026-10-10 23:22:55,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643/comments HTTP/1.1" 200 None 2026-10-10 23:22:56,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:57,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-10 23:22:57,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-10-10 23:22:58,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:58,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1122646161dfcf0118e5940417b3c04a9568f93e?per_page=1 HTTP/1.1" 200 None 2026-10-10 23:22:59,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None 2026-10-10 23:22:59,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/status HTTP/1.1" 200 None 2026-10-10 23:22:59,507 [ scc.repo] DEBUG - PR 643 will-moore 'Don't disable the histogram for big images' 2026-10-10 23:23:00,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638 HTTP/1.1" 200 None 2026-10-10 23:23:00,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638/comments HTTP/1.1" 200 None 2026-10-10 23:23:01,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2026-10-10 23:23:01,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2026-10-10 23:23:02,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None 2026-10-10 23:23:02,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-10 23:23:03,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-10-10 23:23:03,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None 2026-10-10 23:23:04,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2026-10-10 23:23:04,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None 2026-10-10 23:23:05,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2026-10-10 23:23:05,053 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2026-10-10 23:23:05,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2026-10-10 23:23:06,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602/comments HTTP/1.1" 200 None 2026-10-10 23:23:06,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539?page=1 HTTP/1.1" 200 None 2026-10-10 23:23:07,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-10 23:23:07,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539?page=1 HTTP/1.1" 200 None 2026-10-10 23:23:08,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 2 2026-10-10 23:23:08,170 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2026-10-10 23:23:08,170 [ scc.repo] DEBUG ## Branches found: 2026-10-10 23:23:08,170 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2026-10-10 23:23:08,171 [ scc.git] DEBUG Get sha1 of %s 2026-10-10 23:23:08,171 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:23:08,196 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-10-10 23:23:08,216 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-10-10 23:23:08,216 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-10-10 23:23:10,139 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-10-10 23:23:11,349 [ scc.git] DEBUG Updating 675d57fd7..bf6d9d923 2026-10-10 23:23:11,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/691 HTTP/1.1" 200 None 2026-10-10 23:23:12,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/685 HTTP/1.1" 200 None 2026-10-10 23:23:13,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/688 HTTP/1.1" 200 None 2026-10-10 23:23:14,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/683 HTTP/1.1" 200 None 2026-10-10 23:23:15,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/681 HTTP/1.1" 200 None 2026-10-10 23:23:16,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/679 HTTP/1.1" 200 None 2026-10-10 23:23:17,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/676 HTTP/1.1" 200 None 2026-10-10 23:23:17,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/675 HTTP/1.1" 200 None 2026-10-10 23:23:18,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/613 HTTP/1.1" 200 None 2026-10-10 23:23:19,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/670 HTTP/1.1" 200 None 2026-10-10 23:23:20,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/667 HTTP/1.1" 200 None 2026-10-10 23:23:21,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/666 HTTP/1.1" 200 None 2026-10-10 23:23:21,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/655 HTTP/1.1" 200 None 2026-10-10 23:23:22,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/665 HTTP/1.1" 200 None 2026-10-10 23:23:23,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/664 HTTP/1.1" 200 None 2026-10-10 23:23:24,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/658 HTTP/1.1" 200 None 2026-10-10 23:23:25,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/656 HTTP/1.1" 200 None 2026-10-10 23:23:25,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/653 HTTP/1.1" 200 None 2026-10-10 23:23:26,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/646 HTTP/1.1" 200 None 2026-10-10 23:23:27,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/639 HTTP/1.1" 200 None 2026-10-10 23:23:28,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/662 HTTP/1.1" 200 None 2026-10-10 23:23:29,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/651 HTTP/1.1" 200 None 2026-10-10 23:23:29,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/650 HTTP/1.1" 200 None 2026-10-10 23:23:30,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/649 HTTP/1.1" 200 None 2026-10-10 23:23:31,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/648 HTTP/1.1" 200 None 2026-10-10 23:23:32,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/647 HTTP/1.1" 200 None 2026-10-10 23:23:33,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/645 HTTP/1.1" 200 None 2026-10-10 23:23:34,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/637 HTTP/1.1" 200 None 2026-10-10 23:23:34,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/629 HTTP/1.1" 200 None 2026-10-10 23:23:35,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/628 HTTP/1.1" 200 None 2026-10-10 23:23:36,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/619 HTTP/1.1" 200 None 2026-10-10 23:23:37,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/612 HTTP/1.1" 200 None 2026-10-10 23:23:38,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/534 HTTP/1.1" 200 None 2026-10-10 23:23:38,072 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2026-10-10 23:23:38,657 [ scc.git] DEBUG From https://github.com/ome/omero-web 2026-10-10 23:23:38,657 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2026-10-10 23:23:38,687 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2026-10-10 23:23:39,383 [ scc.git] DEBUG From https://github.com/ome/omero-web 2026-10-10 23:23:39,383 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2026-10-10 23:23:39,412 [ scc.git] DEBUG Calling 'git fetch origin pull/643/head' 2026-10-10 23:23:40,048 [ scc.git] DEBUG From https://github.com/ome/omero-web 2026-10-10 23:23:40,049 [ scc.git] DEBUG * branch refs/pull/643/head -> FETCH_HEAD 2026-10-10 23:23:40,081 [ scc.git] DEBUG Calling 'git fetch origin pull/644/head' 2026-10-10 23:23:40,660 [ scc.git] DEBUG From https://github.com/ome/omero-web 2026-10-10 23:23:40,660 [ scc.git] DEBUG * branch refs/pull/644/head -> FETCH_HEAD 2026-10-10 23:23:40,692 [ scc.git] DEBUG Calling 'git fetch origin pull/677/head' 2026-10-10 23:23:41,292 [ scc.git] DEBUG From https://github.com/ome/omero-web 2026-10-10 23:23:41,292 [ scc.git] DEBUG * branch refs/pull/677/head -> FETCH_HEAD 2026-10-10 23:23:41,320 [ scc.git] DEBUG Calling 'git fetch origin pull/682/head' 2026-10-10 23:23:42,161 [ scc.git] DEBUG From https://github.com/ome/omero-web 2026-10-10 23:23:42,161 [ scc.git] DEBUG * branch refs/pull/682/head -> FETCH_HEAD 2026-10-10 23:23:42,190 [ scc.git] DEBUG Calling 'git fetch origin pull/684/head' 2026-10-10 23:23:42,777 [ scc.git] DEBUG From https://github.com/ome/omero-web 2026-10-10 23:23:42,777 [ scc.git] DEBUG * branch refs/pull/684/head -> FETCH_HEAD 2026-10-10 23:23:42,809 [ scc.git] DEBUG Calling 'git fetch origin pull/694/head' 2026-10-10 23:23:43,413 [ scc.git] DEBUG From https://github.com/ome/omero-web 2026-10-10 23:23:43,413 [ scc.git] DEBUG * branch refs/pull/694/head -> FETCH_HEAD 2026-10-10 23:23:43,442 [ scc.git] DEBUG ## Unique users: [] 2026-10-10 23:23:43,442 [ scc.git] DEBUG Get sha1 of %s 2026-10-10 23:23:43,442 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:23:43,458 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2026-10-10 23:23:43,542 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:23:43,558 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2026-10-10 23:23:44,253 [ scc.git] DEBUG Auto-merging omeroweb/webclient/static/webclient/css/dusty.css 2026-10-10 23:23:44,340 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-10 23:23:44,443 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2026-10-10 23:23:44,443 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2026-10-10 23:23:44,443 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2026-10-10 23:23:44,443 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2026-10-10 23:23:44,443 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2026-10-10 23:23:44,443 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2026-10-10 23:23:44,443 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2026-10-10 23:23:44,443 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2026-10-10 23:23:44,443 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2026-10-10 23:23:44,443 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2026-10-10 23:23:44,443 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2026-10-10 23:23:44,443 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2026-10-10 23:23:44,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:23:44,619 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2026-10-10 23:23:44,731 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:23:44,747 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2026-10-10 23:23:45,208 [ scc.git] DEBUG Auto-merging omeroweb/webclient/controller/container.py 2026-10-10 23:23:45,208 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2026-10-10 23:23:45,301 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-10 23:23:45,406 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2026-10-10 23:23:45,406 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2026-10-10 23:23:45,406 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2026-10-10 23:23:45,406 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2026-10-10 23:23:45,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:23:45,600 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122646161dfcf0118e5940417b3c04a9568f93e' 2026-10-10 23:23:45,710 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:23:45,726 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 643 (Don't disable the histogram for big images) 1122646161dfcf0118e5940417b3c04a9568f93e' 2026-10-10 23:23:46,179 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py 2026-10-10 23:23:46,295 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-10 23:23:46,414 [ scc.git] DEBUG .../templates/webclient/annotations/metadata_preview.html | 8 ++++---- 2026-10-10 23:23:46,414 [ scc.git] DEBUG omeroweb/webgateway/static/webgateway/js/ome.histogram.js | 4 ++++ 2026-10-10 23:23:46,414 [ scc.git] DEBUG omeroweb/webgateway/views.py | 4 +--- 2026-10-10 23:23:46,414 [ scc.git] DEBUG 3 files changed, 9 insertions(+), 7 deletions(-) 2026-10-10 23:23:46,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:23:46,598 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1beaa97e6086aaf1e1f8e6147f93dcef722be4f3' 2026-10-10 23:23:46,729 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:23:46,746 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 644 (Add some install instructions for windows) 1beaa97e6086aaf1e1f8e6147f93dcef722be4f3' 2026-10-10 23:23:47,083 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-10 23:23:47,151 [ scc.git] DEBUG README.rst | 50 ++++++++++++++++++++++++++++++++++++++++++++------ 2026-10-10 23:23:47,151 [ scc.git] DEBUG 1 file changed, 44 insertions(+), 6 deletions(-) 2026-10-10 23:23:47,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:23:47,333 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7' 2026-10-10 23:23:47,440 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:23:47,455 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 677 (Add table_histogram endpoint) 1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7' 2026-10-10 23:23:47,766 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py 2026-10-10 23:23:47,841 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-10 23:23:47,920 [ scc.git] DEBUG omeroweb/webgateway/urls.py | 11 +++++ 2026-10-10 23:23:47,920 [ scc.git] DEBUG omeroweb/webgateway/views.py | 108 +++++++++++++++++++++++++++++++++++++++---- 2026-10-10 23:23:47,920 [ scc.git] DEBUG 2 files changed, 109 insertions(+), 10 deletions(-) 2026-10-10 23:23:48,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:23:48,102 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2e6b8720dd1d8506d474bf40e282184270ae2634' 2026-10-10 23:23:48,259 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:23:48,280 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 682 (Initial support for JSON api /annotations endpoint) 2e6b8720dd1d8506d474bf40e282184270ae2634' 2026-10-10 23:23:48,679 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-10 23:23:48,782 [ scc.git] DEBUG omeroweb/api/urls.py | 22 ++++++++++ 2026-10-10 23:23:48,782 [ scc.git] DEBUG omeroweb/api/views.py | 115 +++++++++++++++++++++++++++++++++++++++++++++++++- 2026-10-10 23:23:48,782 [ scc.git] DEBUG 2 files changed, 136 insertions(+), 1 deletion(-) 2026-10-10 23:23:48,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:23:48,973 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8dbf1c22784a7faaa1db2ff9d5150edbc823e575' 2026-10-10 23:23:49,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:23:49,123 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 684 (add config "omero.web.annotation_order") 8dbf1c22784a7faaa1db2ff9d5150edbc823e575' 2026-10-10 23:23:49,513 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-10 23:23:49,589 [ scc.git] DEBUG omeroweb/settings.py | 21 +++++++++++++++++++++ 2026-10-10 23:23:49,589 [ scc.git] DEBUG omeroweb/webclient/tree.py | 27 ++++++++++++++++++++++++++- 2026-10-10 23:23:49,590 [ scc.git] DEBUG 2 files changed, 47 insertions(+), 1 deletion(-) 2026-10-10 23:23:49,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:23:49,778 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...828d8d00e3a69b213a069ac150eb7ce1634d002d' 2026-10-10 23:23:49,922 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:23:49,943 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 694 (Fix exception when ann.ns is null) 828d8d00e3a69b213a069ac150eb7ce1634d002d' 2026-10-10 23:23:50,355 [ scc.git] DEBUG Auto-merging omeroweb/webclient/templates/webclient/annotations/mapanns_underscore.html 2026-10-10 23:23:50,456 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-10 23:23:50,571 [ scc.git] DEBUG .../webclient/templates/webclient/annotations/mapanns_underscore.html | 4 +++- 2026-10-10 23:23:50,571 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 1 deletion(-) 2026-10-10 23:23:50,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:23:50,756 [ scc.git] DEBUG Calling 'git submodule update' 2026-10-10 23:23:50,945 [ scc.git] DEBUG Get sha1 of %s 2026-10-10 23:23:50,945 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-10 23:23:50,963 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-10 23:23:51,089 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-10-10 23:23:51,258 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f067cc0df50> has no local changes 2026-10-10 23:23:51,259 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 693 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 687 TorecLuik 'Preserve formatting in script activity messages' (user: TorecLuik) - PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment) Updating 675d57fd7..bf6d9d923 Previously merged: - PR 691 sbesson 'Honor the configured login view when redirecting as the public user' - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission' - PR 688 pwalczysko 'Fix formatting and linting failures' - PR 683 will-moore 'Post data save imgRdef' - PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web' - PR 679 knabar 'Allow POST requests from public user for specific URLs' - PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel' - PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 613 will-moore 'externalInfo display' - PR 670 sbesson 'Webclient activites: defensively cast start_time to string' - PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing' - PR 655 will-moore 'Handle invalid group id in switch_active_group' - PR 665 sbesson 'Bump minimal django-redis requirement to 6.x' - PR 664 knabar 'Pin django-pipeline to a recent version' - PR 658 will-moore 'Description scrollable if taller than 350px' - PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions' - PR 646 knabar 'Force Django 5.2 in next release' - PR 639 Rdornier 'Split view user label' - PR 662 jburel 'Add gunicorn doc links' - PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property' - PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 649 Tom-TBT 'Strip line endings from LUTs in text format' - PR 648 will-moore 'hide scrollbar for top-links' - PR 647 jburel 'Replace manual changelog by automated GH release step' - PR 645 knabar 'Update changelog for 5.30.0 release' - PR 637 knabar 'Upgrade to Django 5.2 ' - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 628 jburel 'Add protocol required since Django4' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' Merged PRs: - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 643 will-moore 'Don't disable the histogram for big images' - PR 644 jo-mueller 'Add some install instructions for windows' - PR 677 will-moore 'Add table_histogram endpoint' - PR 682 will-moore 'Initial support for JSON api /annotations endpoint' - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"' - PR 694 knabar 'Fix exception when ann.ns is null' Generated by OMERO-python-superbuild-push#96 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/96/)' 2026-10-10 23:23:51,429 [ scc.git] DEBUG [detached HEAD 64395fcaf] merge master -Dorg -Ssuccess-only 2026-10-10 23:23:51,431 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-10 23:23:51,431 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-10 23:23:51,584 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2026-10-10 23:23:51,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:23:51,826 [ scc.config] DEBUG Found submodule.omero-marshal.url 2026-10-10 23:23:52,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:23:52,250 [ scc.config] DEBUG Found submodule.omero-py.url 2026-10-10 23:23:52,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:23:52,677 [ scc.config] DEBUG Found submodule.omero-scripts.url 2026-10-10 23:23:53,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:23:53,328 [ scc.config] DEBUG Found submodule.omero-web.url 2026-10-10 23:23:53,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-10 23:23:53,997 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-10-10 23:23:54,834 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f067f6d7e50> has local changes 2026-10-10 23:23:54,834 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`' - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`' - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`' - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`' Repository: ome/omero-dropbox Already up to date. Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Updating a3dd99b..f8ff1c2 Previously merged: - PR 90 sbesson 'Remove Python 3.9 from the testing matrix' - PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step' - PR 69 will-moore 'Roi encoder allows Shape None' - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages' Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) Updating b44120b5..8990768d Previously merged: - PR 489 will-moore 'Add more opts support for getObjects('Annotation')' - PR 498 sbesson 'Upgrade GitHub actions' - PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo' - PR 496 will-moore 'Fix ice-3.6 download link in README' - PR 199 joshmoore 'user: allow setting default group' - PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository' - PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse' - PR 491 kkoz 'First pass at better cleanse dry-run output' - PR 490 sbesson 'Remove support from Python 3.9' - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()' Merged PRs: - PR 391 joshmoore 'Add jstack command' - PR 459 Tom-TBT 'Wrapper improvements for ROIs' Repository: ome/omero-scripts Updating 03b9116..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' Merged PRs: - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' - PR 235 will-moore 'Batch roi export tags' Repository: ome/omero-web Excluded PRs: - PR 693 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 687 TorecLuik 'Preserve formatting in script activity messages' (user: TorecLuik) - PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment) Updating 675d57fd7..bf6d9d923 Previously merged: - PR 691 sbesson 'Honor the configured login view when redirecting as the public user' - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission' - PR 688 pwalczysko 'Fix formatting and linting failures' - PR 683 will-moore 'Post data save imgRdef' - PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web' - PR 679 knabar 'Allow POST requests from public user for specific URLs' - PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel' - PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 613 will-moore 'externalInfo display' - PR 670 sbesson 'Webclient activites: defensively cast start_time to string' - PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing' - PR 655 will-moore 'Handle invalid group id in switch_active_group' - PR 665 sbesson 'Bump minimal django-redis requirement to 6.x' - PR 664 knabar 'Pin django-pipeline to a recent version' - PR 658 will-moore 'Description scrollable if taller than 350px' - PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions' - PR 646 knabar 'Force Django 5.2 in next release' - PR 639 Rdornier 'Split view user label' - PR 662 jburel 'Add gunicorn doc links' - PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property' - PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 649 Tom-TBT 'Strip line endings from LUTs in text format' - PR 648 will-moore 'hide scrollbar for top-links' - PR 647 jburel 'Replace manual changelog by automated GH release step' - PR 645 knabar 'Update changelog for 5.30.0 release' - PR 637 knabar 'Upgrade to Django 5.2 ' - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 628 jburel 'Add protocol required since Django4' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' Merged PRs: - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 643 will-moore 'Don't disable the histogram for big images' - PR 644 jo-mueller 'Add some install instructions for windows' - PR 677 will-moore 'Add table_histogram endpoint' - PR 682 will-moore 'Initial support for JSON api /annotations endpoint' - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"' - PR 694 knabar 'Fix exception when ann.ns is null' Generated by OMERO-python-superbuild-push#96 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/96/)' 2026-10-10 23:23:55,172 [ scc.git] DEBUG [detached HEAD 9f9f0b3] merge master -Dorg -Ssuccess-only 2026-10-10 23:23:55,173 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2026-10-10 23:23:55,175 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2026-10-10 23:23:55,175 [ scc.merge] INFO Already up to date. 2026-10-10 23:23:55,175 [ scc.merge] INFO 2026-10-10 23:23:55,175 [ scc.merge] INFO Merged PRs: 2026-10-10 23:23:55,175 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`' 2026-10-10 23:23:55,175 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`' 2026-10-10 23:23:55,175 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`' 2026-10-10 23:23:55,175 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`' 2026-10-10 23:23:55,175 [ scc.merge] INFO 2026-10-10 23:23:55,176 [ scc.merge] INFO Repository: ome/omero-dropbox 2026-10-10 23:23:55,176 [ scc.merge] INFO Already up to date. 2026-10-10 23:23:55,176 [ scc.merge] INFO 2026-10-10 23:23:55,176 [ scc.merge] INFO 2026-10-10 23:23:55,176 [ scc.merge] INFO Repository: ome/omero-marshal 2026-10-10 23:23:55,176 [ scc.merge] INFO Excluded PRs: 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2026-10-10 23:23:55,176 [ scc.merge] INFO Updating a3dd99b..f8ff1c2 2026-10-10 23:23:55,176 [ scc.merge] INFO Previously merged: 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 90 sbesson 'Remove Python 3.9 from the testing matrix' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages' 2026-10-10 23:23:55,176 [ scc.merge] INFO 2026-10-10 23:23:55,176 [ scc.merge] INFO 2026-10-10 23:23:55,176 [ scc.merge] INFO Repository: ome/omero-py 2026-10-10 23:23:55,176 [ scc.merge] INFO Excluded PRs: 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric) 2026-10-10 23:23:55,176 [ scc.merge] INFO Updating b44120b5..8990768d 2026-10-10 23:23:55,176 [ scc.merge] INFO Previously merged: 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 489 will-moore 'Add more opts support for getObjects('Annotation')' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 498 sbesson 'Upgrade GitHub actions' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 496 will-moore 'Fix ice-3.6 download link in README' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 491 kkoz 'First pass at better cleanse dry-run output' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 490 sbesson 'Remove support from Python 3.9' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()' 2026-10-10 23:23:55,176 [ scc.merge] INFO 2026-10-10 23:23:55,176 [ scc.merge] INFO Merged PRs: 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' 2026-10-10 23:23:55,176 [ scc.merge] INFO 2026-10-10 23:23:55,176 [ scc.merge] INFO Repository: ome/omero-scripts 2026-10-10 23:23:55,176 [ scc.merge] INFO Updating 03b9116..5b4d768 2026-10-10 23:23:55,176 [ scc.merge] INFO Previously merged: 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-10-10 23:23:55,176 [ scc.merge] INFO 2026-10-10 23:23:55,176 [ scc.merge] INFO Merged PRs: 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 235 will-moore 'Batch roi export tags' 2026-10-10 23:23:55,176 [ scc.merge] INFO 2026-10-10 23:23:55,176 [ scc.merge] INFO Repository: ome/omero-web 2026-10-10 23:23:55,176 [ scc.merge] INFO Excluded PRs: 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 693 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 687 TorecLuik 'Preserve formatting in script activity messages' (user: TorecLuik) 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment) 2026-10-10 23:23:55,176 [ scc.merge] INFO Updating 675d57fd7..bf6d9d923 2026-10-10 23:23:55,176 [ scc.merge] INFO Previously merged: 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 691 sbesson 'Honor the configured login view when redirecting as the public user' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 688 pwalczysko 'Fix formatting and linting failures' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 683 will-moore 'Post data save imgRdef' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 679 knabar 'Allow POST requests from public user for specific URLs' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 670 sbesson 'Webclient activites: defensively cast start_time to string' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 655 will-moore 'Handle invalid group id in switch_active_group' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 665 sbesson 'Bump minimal django-redis requirement to 6.x' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 664 knabar 'Pin django-pipeline to a recent version' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 658 will-moore 'Description scrollable if taller than 350px' 2026-10-10 23:23:55,176 [ scc.merge] INFO - PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' 2026-10-10 23:23:55,177 [ scc.merge] INFO - PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions' 2026-10-10 23:23:55,177 [ scc.merge] INFO - PR 646 knabar 'Force Django 5.2 in next release' 2026-10-10 23:23:55,177 [ scc.merge] INFO - PR 639 Rdornier 'Split view user label' 2026-10-10 23:23:55,177 [ scc.merge] INFO - PR 662 jburel 'Add gunicorn doc links' 2026-10-10 23:23:55,177 [ scc.merge] INFO - PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property' 2026-10-10 23:23:55,177 [ scc.merge] INFO - PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' 2026-10-10 23:23:55,177 [ scc.merge] INFO - PR 649 Tom-TBT 'Strip line endings from LUTs in text format' 2026-10-10 23:23:55,177 [ scc.merge] INFO - PR 648 will-moore 'hide scrollbar for top-links' 2026-10-10 23:23:55,177 [ scc.merge] INFO - PR 647 jburel 'Replace manual changelog by automated GH release step' 2026-10-10 23:23:55,177 [ scc.merge] INFO - PR 645 knabar 'Update changelog for 5.30.0 release' 2026-10-10 23:23:55,177 [ scc.merge] INFO - PR 637 knabar 'Upgrade to Django 5.2 ' 2026-10-10 23:23:55,177 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' 2026-10-10 23:23:55,177 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4' 2026-10-10 23:23:55,177 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins' 2026-10-10 23:23:55,177 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2026-10-10 23:23:55,177 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2026-10-10 23:23:55,177 [ scc.merge] INFO 2026-10-10 23:23:55,177 [ scc.merge] INFO Merged PRs: 2026-10-10 23:23:55,177 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2026-10-10 23:23:55,177 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2026-10-10 23:23:55,177 [ scc.merge] INFO - PR 643 will-moore 'Don't disable the histogram for big images' 2026-10-10 23:23:55,177 [ scc.merge] INFO - PR 644 jo-mueller 'Add some install instructions for windows' 2026-10-10 23:23:55,177 [ scc.merge] INFO - PR 677 will-moore 'Add table_histogram endpoint' 2026-10-10 23:23:55,177 [ scc.merge] INFO - PR 682 will-moore 'Initial support for JSON api /annotations endpoint' 2026-10-10 23:23:55,177 [ scc.merge] INFO - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"' 2026-10-10 23:23:55,177 [ scc.merge] INFO - PR 694 knabar 'Fix exception when ann.ns is null' 2026-10-10 23:23:55,177 [ scc.merge] INFO 2026-10-10 23:23:55,177 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-10-10 23:23:55,177 [ scc.git] DEBUG Calling 'git remote' 2026-10-10 23:23:55,195 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2026-10-10 23:23:55,196 [ scc.git] DEBUG Calling 'git remote' 2026-10-10 23:23:55,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-10 23:23:55,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2026-10-10 23:23:55,215 [ scc.git] DEBUG Calling 'git remote' 2026-10-10 23:23:55,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-10 23:23:55,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2026-10-10 23:23:55,234 [ scc.git] DEBUG Calling 'git remote' 2026-10-10 23:23:55,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-10 23:23:55,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2026-10-10 23:23:55,251 [ scc.git] DEBUG Calling 'git remote' 2026-10-10 23:23:55,273 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-10 23:23:55,273 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2026-10-10 23:23:55,273 [ scc.git] DEBUG Calling 'git remote' 2026-10-10 23:23:55,294 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from ac93ed4 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from a3dd99b nothing to commit, working tree clean Entering 'omero-py' HEAD detached from b44120b5 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 03b9116 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 675d57fd7 nothing to commit, working tree clean HEAD detached from b68c3cf nothing to commit, working tree clean 2026-10-10 23:24:37,582 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS