Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2026-09-25 13:07:17,377 [ scc.config] DEBUG Found github.token
2026-09-25 13:07:17,378 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-09-25 13:07:17,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:07:18,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:07:18,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-09-25 13:07:18,524 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 14:09
2026-09-25 13:07:18,525 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-25 13:07:18,536 [ scc.git] DEBUG Check current status
2026-09-25 13:07:18,536 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-25 13:07:18,561 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-09-25 13:07:18,563 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-25 13:07:18,732 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2026-09-25 13:07:18,808 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2026-09-25 13:07:18,898 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5)
2026-09-25 13:07:18,946 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-09-25 13:07:19,038 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2026-09-25 13:07:19,051 [ scc.config] DEBUG Found remote.origin.url
2026-09-25 13:07:19,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2026-09-25 13:07:19,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-25 13:07:20,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-25 13:07:20,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-25 13:07:21,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-25 13:07:21,288 [ scc.git] DEBUG Resetting...
2026-09-25 13:07:21,288 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-09-25 13:07:21,462 [ scc.git] DEBUG HEAD is now at b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-09-25 13:07:21,463 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-09-25 13:07:21,856 [ scc.git] DEBUG Check current status
2026-09-25 13:07:21,856 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-25 13:07:21,876 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-09-25 13:07:21,877 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-25 13:07:22,042 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2026-09-25 13:07:22,082 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2026-09-25 13:07:22,138 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5)
2026-09-25 13:07:22,183 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-09-25 13:07:22,225 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2026-09-25 13:07:22,225 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-09-25 13:07:22,226 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-09-25 13:07:22,226 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-09-25 13:07:22,226 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-09-25 13:07:22,226 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-09-25 13:07:22,226 [ scc.repo] DEBUG ## PRs found:
2026-09-25 13:07:22,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2026-09-25 13:07:23,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None
2026-09-25 13:07:23,042 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-25 13:07:23,042 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-09-25 13:07:23,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None
2026-09-25 13:07:23,556 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-25 13:07:23,556 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-09-25 13:07:24,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None
2026-09-25 13:07:24,120 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-25 13:07:24,120 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-09-25 13:07:24,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None
2026-09-25 13:07:24,645 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-25 13:07:24,645 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-09-25 13:07:24,645 [ scc.repo] DEBUG ## Branches found:
2026-09-25 13:07:24,645 [ scc.git] DEBUG Get sha1 of %s
2026-09-25 13:07:24,645 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:07:24,658 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-25 13:07:24,677 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-25 13:07:24,677 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-25 13:07:24,700 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-25 13:07:24,757 [ scc.git] DEBUG Already up to date.
2026-09-25 13:07:24,757 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head'
2026-09-25 13:07:25,246 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-25 13:07:25,246 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD
2026-09-25 13:07:25,275 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2026-09-25 13:07:25,769 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-25 13:07:25,769 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2026-09-25 13:07:25,795 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head'
2026-09-25 13:07:26,344 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-25 13:07:26,344 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD
2026-09-25 13:07:26,372 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head'
2026-09-25 13:07:26,882 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-25 13:07:26,882 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD
2026-09-25 13:07:26,910 [ scc.git] DEBUG ## Unique users: []
2026-09-25 13:07:26,910 [ scc.git] DEBUG Get sha1 of %s
2026-09-25 13:07:26,910 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:07:26,921 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c'
2026-09-25 13:07:26,943 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:07:26,954 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c'
2026-09-25 13:07:27,236 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-25 13:07:27,313 [ scc.git] DEBUG omero-marshal | 2 +-
2026-09-25 13:07:27,313 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-09-25 13:07:27,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:07:27,541 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa'
2026-09-25 13:07:27,573 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:07:27,584 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa'
2026-09-25 13:07:27,891 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-25 13:07:27,952 [ scc.git] DEBUG omero-web | 2 +-
2026-09-25 13:07:27,952 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-09-25 13:07:28,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:07:28,162 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf'
2026-09-25 13:07:28,196 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:07:28,207 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf'
2026-09-25 13:07:28,534 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-25 13:07:28,605 [ scc.git] DEBUG omero-dropbox | 2 +-
2026-09-25 13:07:28,606 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-09-25 13:07:28,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:07:28,811 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-09-25 13:07:28,843 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:07:28,854 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-09-25 13:07:29,253 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-25 13:07:29,322 [ scc.git] DEBUG omero-py | 2 +-
2026-09-25 13:07:29,322 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-09-25 13:07:29,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:07:29,505 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-25 13:07:29,891 [ scc.git] DEBUG Submodule path 'omero-dropbox': checked out 'ac93ed4b4a139dd73b414ead55223071fc465de5'
2026-09-25 13:07:30,224 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c'
2026-09-25 13:07:30,841 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1'
2026-09-25 13:07:31,774 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b'
2026-09-25 13:07:31,775 [ scc.git] DEBUG Get sha1 of %s
2026-09-25 13:07:31,775 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:07:31,787 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-25 13:07:32,647 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6c73b93b50> has no local changes
2026-09-25 13:07:32,647 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
- PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
- PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
- PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
Generated by OMERO-python-superbuild-push#79 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/79/)'
2026-09-25 13:07:33,122 [ scc.git] DEBUG [detached HEAD 25b8f4a] merge master -Dorg -Snone
2026-09-25 13:07:33,124 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2026-09-25 13:07:33,124 [ scc.merge] INFO Already up to date.
2026-09-25 13:07:33,124 [ scc.merge] INFO
2026-09-25 13:07:33,124 [ scc.merge] INFO Merged PRs:
2026-09-25 13:07:33,124 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-09-25 13:07:33,124 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-09-25 13:07:33,124 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-09-25 13:07:33,124 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-09-25 13:07:33,124 [ scc.merge] INFO
2026-09-25 13:07:33,124 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-09-25 13:07:33,124 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Submodule path 'omero-marshal': checked out 'f8ff1c2e439f0599d96423b7f64898864548ba9f'
Submodule path 'omero-py': checked out '8990768db971d03ea5dafabc177aab910f567c68'
Submodule path 'omero-scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0'
Submodule path 'omero-web': checked out 'bf6d9d9236add51d41b100c8bc2cff6bdc917389'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2026-09-25 13:07:40,068 [ scc.config] DEBUG Found github.token
2026-09-25 13:07:40,070 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-09-25 13:07:40,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:07:40,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:07:41,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-09-25 13:07:41,207 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 14:09
2026-09-25 13:07:41,208 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-25 13:07:41,220 [ scc.git] DEBUG Check current status
2026-09-25 13:07:41,220 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-25 13:07:41,244 [ scc.git] DEBUG 25b8f4a merge master -Dorg -Snone
2026-09-25 13:07:41,244 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-25 13:07:41,415 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4)
2026-09-25 13:07:41,454 [ scc.git] DEBUG +f8ff1c2e439f0599d96423b7f64898864548ba9f omero-marshal (v0.9.1-3-gf8ff1c2)
2026-09-25 13:07:41,534 [ scc.git] DEBUG +8990768db971d03ea5dafabc177aab910f567c68 omero-py (v5.23.0-37-g8990768d)
2026-09-25 13:07:41,573 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 omero-scripts (v5.10.0-1-g5b4d768)
2026-09-25 13:07:41,624 [ scc.git] DEBUG +bf6d9d9236add51d41b100c8bc2cff6bdc917389 omero-web (v5.33.2-1-gbf6d9d923)
2026-09-25 13:07:41,639 [ scc.config] DEBUG Found remote.origin.url
2026-09-25 13:07:41,639 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2026-09-25 13:07:41,642 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2026-09-25 13:07:41,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2026-09-25 13:07:42,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-25 13:07:42,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-25 13:07:43,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-25 13:07:43,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-25 13:07:43,859 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-25 13:07:43,980 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-09-25 13:07:43,980 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-25 13:07:43,993 [ scc.git] DEBUG Check current status
2026-09-25 13:07:43,993 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-25 13:07:44,013 [ scc.git] DEBUG ac93ed4 Merge pull request #26 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0
2026-09-25 13:07:44,014 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-25 13:07:44,139 [ scc.config] DEBUG Found remote.origin.url
2026-09-25 13:07:44,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2026-09-25 13:07:45,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-25 13:07:45,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-25 13:07:46,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-25 13:07:46,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-25 13:07:46,683 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-25 13:07:46,806 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-25 13:07:46,807 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-09-25 13:07:46,807 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-25 13:07:46,821 [ scc.git] DEBUG Check current status
2026-09-25 13:07:46,821 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-25 13:07:46,840 [ scc.git] DEBUG f8ff1c2 Merge pull request #90 from sbesson/python_3.9_removal
2026-09-25 13:07:46,841 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-25 13:07:46,960 [ scc.config] DEBUG Found remote.origin.url
2026-09-25 13:07:47,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2026-09-25 13:07:47,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-25 13:07:48,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-25 13:07:48,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-25 13:07:49,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-25 13:07:49,162 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-25 13:07:49,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-25 13:07:49,284 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-09-25 13:07:49,284 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-25 13:07:49,296 [ scc.git] DEBUG Check current status
2026-09-25 13:07:49,296 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-25 13:07:49,327 [ scc.git] DEBUG 8990768d Merge pull request #489 from will-moore/getObjects_Annotations
2026-09-25 13:07:49,331 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-25 13:07:49,451 [ scc.config] DEBUG Found remote.origin.url
2026-09-25 13:07:49,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2026-09-25 13:07:50,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-25 13:07:50,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-25 13:07:51,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-25 13:07:51,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-25 13:07:51,699 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-25 13:07:51,813 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-25 13:07:51,813 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-09-25 13:07:51,813 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-25 13:07:51,826 [ scc.git] DEBUG Check current status
2026-09-25 13:07:51,826 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-25 13:07:51,845 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0
2026-09-25 13:07:51,846 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-25 13:07:51,971 [ scc.config] DEBUG Found remote.origin.url
2026-09-25 13:07:51,971 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2026-09-25 13:07:52,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2026-09-25 13:07:52,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-25 13:07:53,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-25 13:07:53,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-25 13:07:54,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-25 13:07:54,208 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-25 13:07:54,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-25 13:07:54,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-09-25 13:07:54,320 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-25 13:07:54,332 [ scc.git] DEBUG Check current status
2026-09-25 13:07:54,332 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-25 13:07:54,359 [ scc.git] DEBUG bf6d9d923 Bump version: 5.33.2 → 5.33.3.dev0
2026-09-25 13:07:54,360 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-25 13:07:54,473 [ scc.config] DEBUG Found remote.origin.url
2026-09-25 13:07:54,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2026-09-25 13:07:55,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-25 13:07:55,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-25 13:07:56,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-25 13:07:56,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-25 13:07:56,799 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-25 13:07:56,917 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-25 13:07:56,917 [ scc.git] DEBUG Resetting...
2026-09-25 13:07:56,917 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-09-25 13:07:57,084 [ scc.git] DEBUG HEAD is now at 25b8f4a merge master -Dorg -Snone
2026-09-25 13:07:57,085 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-09-25 13:07:57,551 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c'
2026-09-25 13:07:58,086 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1'
2026-09-25 13:07:58,427 [ scc.git] DEBUG Submodule path 'omero-scripts': checked out '03b9116196e1a799dd18a666559613d912be01a5'
2026-09-25 13:07:59,476 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b'
2026-09-25 13:07:59,502 [ scc.git] DEBUG Check current status
2026-09-25 13:07:59,502 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-25 13:07:59,522 [ scc.git] DEBUG 25b8f4a merge master -Dorg -Snone
2026-09-25 13:07:59,523 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-25 13:07:59,668 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4)
2026-09-25 13:07:59,707 [ scc.git] DEBUG a3dd99b825ad44c9beadc38a8ae8ba94a155f62c omero-marshal (v0.9.0-18-ga3dd99b)
2026-09-25 13:07:59,760 [ scc.git] DEBUG b44120b5235b24db6dde315369ea1519bbeb30c1 omero-py (v5.21.2-3-gb44120b5)
2026-09-25 13:07:59,798 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-09-25 13:07:59,841 [ scc.git] DEBUG 675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b omero-web (v5.29.3-1-g675d57fd7)
2026-09-25 13:07:59,842 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-09-25 13:07:59,842 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-09-25 13:07:59,842 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-09-25 13:07:59,842 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-09-25 13:07:59,842 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-09-25 13:07:59,842 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2026-09-25 13:07:59,842 [ scc.repo] DEBUG ## PRs found:
2026-09-25 13:08:00,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2026-09-25 13:08:00,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None
2026-09-25 13:08:00,687 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-25 13:08:01,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None
2026-09-25 13:08:01,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-25 13:08:02,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None
2026-09-25 13:08:02,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?per_page=1 HTTP/1.1" 200 2
2026-09-25 13:08:02,968 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-09-25 13:08:03,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None
2026-09-25 13:08:03,460 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-25 13:08:04,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None
2026-09-25 13:08:04,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-25 13:08:05,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None
2026-09-25 13:08:05,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/09050892c054f3697fd3604d05ce68b65af6dedf?per_page=1 HTTP/1.1" 200 2
2026-09-25 13:08:05,573 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-09-25 13:08:06,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None
2026-09-25 13:08:06,095 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-25 13:08:06,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None
2026-09-25 13:08:07,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-25 13:08:07,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None
2026-09-25 13:08:08,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/7632acc02b92ba91ed954701ac52de2732a56daa?per_page=1 HTTP/1.1" 200 2
2026-09-25 13:08:08,180 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-09-25 13:08:08,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None
2026-09-25 13:08:08,707 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-25 13:08:09,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None
2026-09-25 13:08:09,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-25 13:08:10,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None
2026-09-25 13:08:10,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/e5077065e3781e634471b4828f120f18c16dad1c?per_page=1 HTTP/1.1" 200 2
2026-09-25 13:08:10,846 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-09-25 13:08:10,847 [ scc.repo] DEBUG ## Branches found:
2026-09-25 13:08:10,847 [ scc.git] DEBUG Get sha1 of %s
2026-09-25 13:08:10,847 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:08:10,860 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-25 13:08:10,878 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-25 13:08:10,878 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-25 13:08:10,904 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-25 13:08:10,968 [ scc.git] DEBUG Already up to date.
2026-09-25 13:08:10,969 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head'
2026-09-25 13:08:11,442 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-25 13:08:11,443 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD
2026-09-25 13:08:11,473 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2026-09-25 13:08:11,938 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-25 13:08:11,939 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2026-09-25 13:08:11,964 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head'
2026-09-25 13:08:12,487 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-25 13:08:12,487 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD
2026-09-25 13:08:12,517 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head'
2026-09-25 13:08:13,009 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-25 13:08:13,009 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD
2026-09-25 13:08:13,034 [ scc.git] DEBUG ## Unique users: []
2026-09-25 13:08:13,034 [ scc.git] DEBUG Get sha1 of %s
2026-09-25 13:08:13,034 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:08:13,043 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c'
2026-09-25 13:08:13,069 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:08:13,081 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c'
2026-09-25 13:08:13,140 [ scc.git] DEBUG Already up to date.
2026-09-25 13:08:13,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:08:13,327 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa'
2026-09-25 13:08:13,355 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:08:13,370 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa'
2026-09-25 13:08:13,433 [ scc.git] DEBUG Already up to date.
2026-09-25 13:08:13,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:08:13,763 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf'
2026-09-25 13:08:13,793 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:08:13,804 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf'
2026-09-25 13:08:13,861 [ scc.git] DEBUG Already up to date.
2026-09-25 13:08:14,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:08:14,209 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-09-25 13:08:14,235 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:08:14,246 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-09-25 13:08:14,292 [ scc.git] DEBUG Already up to date.
2026-09-25 13:08:14,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:08:14,646 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-25 13:08:14,903 [ scc.git] DEBUG Get sha1 of %s
2026-09-25 13:08:14,903 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:08:14,913 [ scc.repo] DEBUG ## PRs found:
2026-09-25 13:08:15,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 2
2026-09-25 13:08:15,133 [ scc.repo] DEBUG ## Branches found:
2026-09-25 13:08:15,133 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-09-25 13:08:15,133 [ scc.git] DEBUG Get sha1 of %s
2026-09-25 13:08:15,133 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:08:15,149 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-25 13:08:15,165 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-25 13:08:15,165 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-25 13:08:15,186 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-25 13:08:15,243 [ scc.git] DEBUG Already up to date.
2026-09-25 13:08:15,243 [ scc.git] DEBUG ## Unique users: []
2026-09-25 13:08:15,243 [ scc.git] DEBUG Get sha1 of %s
2026-09-25 13:08:15,243 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:08:15,257 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-25 13:08:15,373 [ scc.git] DEBUG Get sha1 of %s
2026-09-25 13:08:15,373 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:08:15,386 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-25 13:08:15,503 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-25 13:08:15,551 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd624897c50> has no local changes
2026-09-25 13:08:15,551 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Generated by OMERO-python-superbuild-push#79 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/79/)'
2026-09-25 13:08:15,693 [ scc.git] DEBUG [detached HEAD 2e52e33] merge master -Dorg -Ssuccess-only
2026-09-25 13:08:15,695 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-25 13:08:15,696 [ scc.repo] DEBUG ## PRs found:
2026-09-25 13:08:16,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2026-09-25 13:08:16,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None
2026-09-25 13:08:17,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None
2026-09-25 13:08:17,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2026-09-25 13:08:18,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2026-09-25 13:08:18,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2026-09-25 13:08:19,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2026-09-25 13:08:19,042 [ scc.repo] DEBUG ## Branches found:
2026-09-25 13:08:19,042 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-09-25 13:08:19,042 [ scc.git] DEBUG Get sha1 of %s
2026-09-25 13:08:19,042 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:08:19,059 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-25 13:08:19,077 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-25 13:08:19,077 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-25 13:08:19,102 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-25 13:08:19,406 [ scc.git] DEBUG Updating a3dd99b..f8ff1c2
2026-09-25 13:08:20,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/90 HTTP/1.1" 200 None
2026-09-25 13:08:21,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/89 HTTP/1.1" 200 None
2026-09-25 13:08:22,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/69 HTTP/1.1" 200 None
2026-09-25 13:08:23,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/88 HTTP/1.1" 200 None
2026-09-25 13:08:23,368 [ scc.git] DEBUG ## Unique users: []
2026-09-25 13:08:23,368 [ scc.git] DEBUG Get sha1 of %s
2026-09-25 13:08:23,368 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:08:23,389 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-25 13:08:23,513 [ scc.git] DEBUG Get sha1 of %s
2026-09-25 13:08:23,513 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:08:23,528 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-25 13:08:23,644 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-25 13:08:23,749 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd624d60450> has no local changes
2026-09-25 13:08:23,749 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Updating a3dd99b..f8ff1c2
Previously merged:
- PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
- PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
- PR 69 will-moore 'Roi encoder allows Shape None'
- PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
Generated by OMERO-python-superbuild-push#79 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/79/)'
2026-09-25 13:08:23,920 [ scc.git] DEBUG [detached HEAD 24c9d36] merge master -Dorg -Ssuccess-only
2026-09-25 13:08:23,923 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-25 13:08:23,923 [ scc.repo] DEBUG ## PRs found:
2026-09-25 13:08:24,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2026-09-25 13:08:24,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None
2026-09-25 13:08:25,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None
2026-09-25 13:08:25,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None
2026-09-25 13:08:26,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459/comments HTTP/1.1" 200 None
2026-09-25 13:08:26,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None
2026-09-25 13:08:27,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-25 13:08:28,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-25 13:08:28,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None
2026-09-25 13:08:28,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/57c54f02b543e8f7da852c34a0ababf95562853d?per_page=1 HTTP/1.1" 200 None
2026-09-25 13:08:29,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None
2026-09-25 13:08:29,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/status HTTP/1.1" 200 None
2026-09-25 13:08:29,969 [ scc.repo] DEBUG - PR 459 Tom-TBT 'Wrapper improvements for ROIs'
2026-09-25 13:08:30,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2026-09-25 13:08:30,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None
2026-09-25 13:08:31,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None
2026-09-25 13:08:32,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-25 13:08:32,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None
2026-09-25 13:08:33,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2
2026-09-25 13:08:33,017 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2026-09-25 13:08:33,017 [ scc.repo] DEBUG ## Branches found:
2026-09-25 13:08:33,017 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-09-25 13:08:33,018 [ scc.git] DEBUG Get sha1 of %s
2026-09-25 13:08:33,018 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:08:33,035 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-25 13:08:33,058 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-25 13:08:33,058 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-25 13:08:33,438 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-25 13:08:33,986 [ scc.git] DEBUG Updating b44120b5..8990768d
2026-09-25 13:08:36,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/489 HTTP/1.1" 200 None
2026-09-25 13:08:37,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/498 HTTP/1.1" 200 None
2026-09-25 13:08:38,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/495 HTTP/1.1" 200 None
2026-09-25 13:08:38,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/496 HTTP/1.1" 200 None
2026-09-25 13:08:40,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/199 HTTP/1.1" 200 None
2026-09-25 13:08:41,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/492 HTTP/1.1" 200 None
2026-09-25 13:08:42,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/493 HTTP/1.1" 200 None
2026-09-25 13:08:43,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/491 HTTP/1.1" 200 None
2026-09-25 13:08:43,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/490 HTTP/1.1" 200 None
2026-09-25 13:08:44,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/483 HTTP/1.1" 200 None
2026-09-25 13:08:44,694 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2026-09-25 13:08:45,349 [ scc.git] DEBUG From https://github.com/ome/omero-py
2026-09-25 13:08:45,349 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2026-09-25 13:08:45,378 [ scc.git] DEBUG Calling 'git fetch origin pull/459/head'
2026-09-25 13:08:46,281 [ scc.git] DEBUG From https://github.com/ome/omero-py
2026-09-25 13:08:46,281 [ scc.git] DEBUG * branch refs/pull/459/head -> FETCH_HEAD
2026-09-25 13:08:46,316 [ scc.git] DEBUG ## Unique users: []
2026-09-25 13:08:46,316 [ scc.git] DEBUG Get sha1 of %s
2026-09-25 13:08:46,316 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:08:46,330 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2026-09-25 13:08:46,393 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:08:46,413 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2026-09-25 13:08:46,711 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2026-09-25 13:08:46,800 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-25 13:08:46,881 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2026-09-25 13:08:46,881 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2026-09-25 13:08:47,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:08:47,082 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...57c54f02b543e8f7da852c34a0ababf95562853d'
2026-09-25 13:08:47,165 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:08:47,181 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 459 (Wrapper improvements for ROIs) 57c54f02b543e8f7da852c34a0ababf95562853d'
2026-09-25 13:08:47,505 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2026-09-25 13:08:47,601 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-25 13:08:47,691 [ scc.git] DEBUG src/omero/gateway/__init__.py | 45 ++++++++++++++++++++++++++++++++++++-------
2026-09-25 13:08:47,691 [ scc.git] DEBUG 1 file changed, 38 insertions(+), 7 deletions(-)
2026-09-25 13:08:47,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:08:47,879 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-25 13:08:48,029 [ scc.git] DEBUG Get sha1 of %s
2026-09-25 13:08:48,029 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:08:48,042 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-25 13:08:48,166 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-25 13:08:48,456 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd6248d8150> has no local changes
2026-09-25 13:08:48,457 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
Updating b44120b5..8990768d
Previously merged:
- PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
- PR 498 sbesson 'Upgrade GitHub actions'
- PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
- PR 496 will-moore 'Fix ice-3.6 download link in README'
- PR 199 joshmoore 'user: allow setting default group'
- PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
- PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
- PR 491 kkoz 'First pass at better cleanse dry-run output'
- PR 490 sbesson 'Remove support from Python 3.9'
- PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
Merged PRs:
- PR 391 joshmoore 'Add jstack command'
- PR 459 Tom-TBT 'Wrapper improvements for ROIs'
Generated by OMERO-python-superbuild-push#79 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/79/)'
2026-09-25 13:08:48,648 [ scc.git] DEBUG [detached HEAD 4381aa9a] merge master -Dorg -Ssuccess-only
2026-09-25 13:08:48,654 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-25 13:08:48,654 [ scc.git] INFO Overriding base-branch from master to develop
2026-09-25 13:08:48,654 [ scc.repo] DEBUG ## PRs found:
2026-09-25 13:08:48,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2026-09-25 13:08:49,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/232 HTTP/1.1" 200 None
2026-09-25 13:08:50,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None
2026-09-25 13:08:50,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-25 13:08:51,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-25 13:08:51,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None
2026-09-25 13:08:52,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/e190baa635f40826befc84321719243092ee849f?per_page=1 HTTP/1.1" 200 2
2026-09-25 13:08:52,111 [ scc.repo] DEBUG - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
2026-09-25 13:08:52,111 [ scc.repo] DEBUG ## Branches found:
2026-09-25 13:08:52,111 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-09-25 13:08:52,112 [ scc.git] DEBUG Get sha1 of %s
2026-09-25 13:08:52,112 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:08:52,131 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2026-09-25 13:08:52,150 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-25 13:08:52,150 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2026-09-25 13:08:52,193 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2026-09-25 13:08:52,449 [ scc.git] DEBUG Updating 03b9116..5b4d768
2026-09-25 13:08:53,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None
2026-09-25 13:08:53,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None
2026-09-25 13:08:54,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None
2026-09-25 13:08:55,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None
2026-09-25 13:08:55,692 [ scc.git] DEBUG Calling 'git fetch origin pull/232/head'
2026-09-25 13:08:56,379 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2026-09-25 13:08:56,379 [ scc.git] DEBUG * branch refs/pull/232/head -> FETCH_HEAD
2026-09-25 13:08:56,410 [ scc.git] DEBUG ## Unique users: []
2026-09-25 13:08:56,410 [ scc.git] DEBUG Get sha1 of %s
2026-09-25 13:08:56,410 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:08:56,428 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e190baa635f40826befc84321719243092ee849f'
2026-09-25 13:08:56,466 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:08:56,481 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 232 (Add Auto header detection to `Populate_Metadata.py`) e190baa635f40826befc84321719243092ee849f'
2026-09-25 13:08:56,761 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-25 13:08:56,862 [ scc.git] DEBUG omero/import_scripts/Populate_Metadata.py | 26 ++++++++++++++++++++++++--
2026-09-25 13:08:56,862 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-)
2026-09-25 13:08:57,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:08:57,157 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-25 13:08:57,298 [ scc.git] DEBUG Get sha1 of %s
2026-09-25 13:08:57,298 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:08:57,313 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-25 13:08:57,440 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-25 13:08:57,510 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd623721ed0> has no local changes
2026-09-25 13:08:57,510 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Updating 03b9116..5b4d768
Previously merged:
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
Merged PRs:
- PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
Generated by OMERO-python-superbuild-push#79 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/79/)'
2026-09-25 13:08:57,678 [ scc.git] DEBUG [detached HEAD e930eb1] merge master -Dorg -Ssuccess-only
2026-09-25 13:08:57,680 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-25 13:08:57,680 [ scc.repo] DEBUG ## PRs found:
2026-09-25 13:08:58,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2026-09-25 13:08:58,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/687 HTTP/1.1" 200 None
2026-09-25 13:08:59,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/687/comments HTTP/1.1" 200 None
2026-09-25 13:08:59,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684 HTTP/1.1" 200 None
2026-09-25 13:09:00,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684/comments HTTP/1.1" 200 None
2026-09-25 13:09:00,257 [ scc.repo] DEBUG # ... Include label: include
2026-09-25 13:09:00,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-09-25 13:09:01,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-25 13:09:01,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-25 13:09:02,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-09-25 13:09:02,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?per_page=1 HTTP/1.1" 200 None
2026-09-25 13:09:03,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-09-25 13:09:03,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/status HTTP/1.1" 200 None
2026-09-25 13:09:03,871 [ scc.repo] DEBUG - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
2026-09-25 13:09:04,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682 HTTP/1.1" 200 None
2026-09-25 13:09:04,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682/comments HTTP/1.1" 200 None
2026-09-25 13:09:05,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None
2026-09-25 13:09:06,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-25 13:09:06,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-25 13:09:07,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None
2026-09-25 13:09:07,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/2e6b8720dd1d8506d474bf40e282184270ae2634?per_page=1 HTTP/1.1" 200 None
2026-09-25 13:09:08,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None
2026-09-25 13:09:08,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/status HTTP/1.1" 200 None
2026-09-25 13:09:08,617 [ scc.repo] DEBUG - PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
2026-09-25 13:09:09,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/677 HTTP/1.1" 200 None
2026-09-25 13:09:09,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/677/comments HTTP/1.1" 200 None
2026-09-25 13:09:10,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-09-25 13:09:10,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-25 13:09:11,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-25 13:09:11,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-09-25 13:09:12,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?per_page=1 HTTP/1.1" 200 None
2026-09-25 13:09:12,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-09-25 13:09:13,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/status HTTP/1.1" 200 None
2026-09-25 13:09:13,428 [ scc.repo] DEBUG - PR 677 will-moore 'Add table_histogram endpoint'
2026-09-25 13:09:13,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/644 HTTP/1.1" 200 None
2026-09-25 13:09:14,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/644/comments HTTP/1.1" 200 None
2026-09-25 13:09:15,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-09-25 13:09:15,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-25 13:09:16,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-25 13:09:16,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-09-25 13:09:17,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?per_page=1 HTTP/1.1" 200 None
2026-09-25 13:09:17,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-09-25 13:09:18,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/status HTTP/1.1" 200 None
2026-09-25 13:09:18,106 [ scc.repo] DEBUG - PR 644 jo-mueller 'Add some install instructions for windows'
2026-09-25 13:09:18,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643 HTTP/1.1" 200 None
2026-09-25 13:09:19,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643/comments HTTP/1.1" 200 None
2026-09-25 13:09:19,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-09-25 13:09:20,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-25 13:09:21,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-25 13:09:21,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-09-25 13:09:22,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1122646161dfcf0118e5940417b3c04a9568f93e?per_page=1 HTTP/1.1" 200 None
2026-09-25 13:09:22,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-09-25 13:09:23,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/status HTTP/1.1" 200 None
2026-09-25 13:09:23,120 [ scc.repo] DEBUG - PR 643 will-moore 'Don't disable the histogram for big images'
2026-09-25 13:09:23,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638 HTTP/1.1" 200 None
2026-09-25 13:09:24,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638/comments HTTP/1.1" 200 None
2026-09-25 13:09:24,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None
2026-09-25 13:09:25,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None
2026-09-25 13:09:26,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-09-25 13:09:26,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-25 13:09:27,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-25 13:09:27,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-09-25 13:09:28,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None
2026-09-25 13:09:28,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-09-25 13:09:29,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None
2026-09-25 13:09:29,210 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf'
2026-09-25 13:09:29,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None
2026-09-25 13:09:30,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602/comments HTTP/1.1" 200 None
2026-09-25 13:09:30,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539?page=1 HTTP/1.1" 200 None
2026-09-25 13:09:31,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-25 13:09:31,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539?page=1 HTTP/1.1" 200 None
2026-09-25 13:09:32,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 2
2026-09-25 13:09:32,359 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations'
2026-09-25 13:09:32,360 [ scc.repo] DEBUG ## Branches found:
2026-09-25 13:09:32,360 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-09-25 13:09:32,361 [ scc.git] DEBUG Get sha1 of %s
2026-09-25 13:09:32,361 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:09:32,382 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-25 13:09:32,405 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-25 13:09:32,406 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-25 13:09:33,714 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-25 13:09:35,105 [ scc.git] DEBUG Updating 675d57fd7..bf6d9d923
2026-09-25 13:09:35,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/691 HTTP/1.1" 200 None
2026-09-25 13:09:36,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/685 HTTP/1.1" 200 None
2026-09-25 13:09:37,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/688 HTTP/1.1" 200 None
2026-09-25 13:09:38,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/683 HTTP/1.1" 200 None
2026-09-25 13:09:38,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/681 HTTP/1.1" 200 None
2026-09-25 13:09:39,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/679 HTTP/1.1" 200 None
2026-09-25 13:09:40,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/676 HTTP/1.1" 200 None
2026-09-25 13:09:41,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/675 HTTP/1.1" 200 None
2026-09-25 13:09:42,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/613 HTTP/1.1" 200 None
2026-09-25 13:09:43,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/670 HTTP/1.1" 200 None
2026-09-25 13:09:44,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/667 HTTP/1.1" 200 None
2026-09-25 13:09:45,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/666 HTTP/1.1" 200 None
2026-09-25 13:09:46,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/655 HTTP/1.1" 200 None
2026-09-25 13:09:47,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/665 HTTP/1.1" 200 None
2026-09-25 13:09:48,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/664 HTTP/1.1" 200 None
2026-09-25 13:09:49,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/658 HTTP/1.1" 200 None
2026-09-25 13:09:50,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/656 HTTP/1.1" 200 None
2026-09-25 13:09:50,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/653 HTTP/1.1" 200 None
2026-09-25 13:09:51,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/646 HTTP/1.1" 200 None
2026-09-25 13:09:52,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/639 HTTP/1.1" 200 None
2026-09-25 13:09:53,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/662 HTTP/1.1" 200 None
2026-09-25 13:09:54,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/651 HTTP/1.1" 200 None
2026-09-25 13:09:54,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/650 HTTP/1.1" 200 None
2026-09-25 13:09:55,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/649 HTTP/1.1" 200 None
2026-09-25 13:09:56,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/648 HTTP/1.1" 200 None
2026-09-25 13:09:57,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/647 HTTP/1.1" 200 None
2026-09-25 13:09:58,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/645 HTTP/1.1" 200 None
2026-09-25 13:09:59,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/637 HTTP/1.1" 200 None
2026-09-25 13:09:59,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/629 HTTP/1.1" 200 None
2026-09-25 13:10:00,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/628 HTTP/1.1" 200 None
2026-09-25 13:10:01,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/619 HTTP/1.1" 200 None
2026-09-25 13:10:02,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/612 HTTP/1.1" 200 None
2026-09-25 13:10:03,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/534 HTTP/1.1" 200 None
2026-09-25 13:10:03,600 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head'
2026-09-25 13:10:04,242 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-25 13:10:04,242 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD
2026-09-25 13:10:04,268 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head'
2026-09-25 13:10:04,981 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-25 13:10:04,981 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD
2026-09-25 13:10:05,010 [ scc.git] DEBUG Calling 'git fetch origin pull/643/head'
2026-09-25 13:10:05,704 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-25 13:10:05,704 [ scc.git] DEBUG * branch refs/pull/643/head -> FETCH_HEAD
2026-09-25 13:10:05,733 [ scc.git] DEBUG Calling 'git fetch origin pull/644/head'
2026-09-25 13:10:06,609 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-25 13:10:06,609 [ scc.git] DEBUG * branch refs/pull/644/head -> FETCH_HEAD
2026-09-25 13:10:06,639 [ scc.git] DEBUG Calling 'git fetch origin pull/677/head'
2026-09-25 13:10:07,291 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-25 13:10:07,291 [ scc.git] DEBUG * branch refs/pull/677/head -> FETCH_HEAD
2026-09-25 13:10:07,322 [ scc.git] DEBUG Calling 'git fetch origin pull/682/head'
2026-09-25 13:10:08,908 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-25 13:10:08,908 [ scc.git] DEBUG * branch refs/pull/682/head -> FETCH_HEAD
2026-09-25 13:10:08,934 [ scc.git] DEBUG Calling 'git fetch origin pull/684/head'
2026-09-25 13:10:09,619 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-25 13:10:09,619 [ scc.git] DEBUG * branch refs/pull/684/head -> FETCH_HEAD
2026-09-25 13:10:09,651 [ scc.git] DEBUG ## Unique users: []
2026-09-25 13:10:09,651 [ scc.git] DEBUG Get sha1 of %s
2026-09-25 13:10:09,651 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:10:09,665 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539'
2026-09-25 13:10:09,740 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:10:09,756 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539'
2026-09-25 13:10:10,314 [ scc.git] DEBUG Auto-merging omeroweb/webclient/static/webclient/css/dusty.css
2026-09-25 13:10:10,394 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-25 13:10:10,495 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 -
2026-09-25 13:10:10,495 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++--
2026-09-25 13:10:10,495 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++-
2026-09-25 13:10:10,495 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +-
2026-09-25 13:10:10,495 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++-
2026-09-25 13:10:10,495 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++--
2026-09-25 13:10:10,495 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++--
2026-09-25 13:10:10,495 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++-----
2026-09-25 13:10:10,495 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 +
2026-09-25 13:10:10,495 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +-
2026-09-25 13:10:10,495 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++--
2026-09-25 13:10:10,495 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-)
2026-09-25 13:10:10,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:10:10,687 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2026-09-25 13:10:10,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:10:10,793 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2026-09-25 13:10:11,229 [ scc.git] DEBUG Auto-merging omeroweb/webclient/controller/container.py
2026-09-25 13:10:11,229 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2026-09-25 13:10:11,305 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-25 13:10:11,407 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------
2026-09-25 13:10:11,408 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +---
2026-09-25 13:10:11,408 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 -----------------
2026-09-25 13:10:11,408 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-)
2026-09-25 13:10:11,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:10:11,603 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122646161dfcf0118e5940417b3c04a9568f93e'
2026-09-25 13:10:11,726 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:10:11,742 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 643 (Don't disable the histogram for big images) 1122646161dfcf0118e5940417b3c04a9568f93e'
2026-09-25 13:10:12,164 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2026-09-25 13:10:12,244 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-25 13:10:12,356 [ scc.git] DEBUG .../templates/webclient/annotations/metadata_preview.html | 8 ++++----
2026-09-25 13:10:12,356 [ scc.git] DEBUG omeroweb/webgateway/static/webgateway/js/ome.histogram.js | 4 ++++
2026-09-25 13:10:12,356 [ scc.git] DEBUG omeroweb/webgateway/views.py | 4 +---
2026-09-25 13:10:12,356 [ scc.git] DEBUG 3 files changed, 9 insertions(+), 7 deletions(-)
2026-09-25 13:10:12,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:10:12,576 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1beaa97e6086aaf1e1f8e6147f93dcef722be4f3'
2026-09-25 13:10:12,672 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:10:12,687 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 644 (Add some install instructions for windows) 1beaa97e6086aaf1e1f8e6147f93dcef722be4f3'
2026-09-25 13:10:13,000 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-25 13:10:13,068 [ scc.git] DEBUG README.rst | 50 ++++++++++++++++++++++++++++++++++++++++++++------
2026-09-25 13:10:13,069 [ scc.git] DEBUG 1 file changed, 44 insertions(+), 6 deletions(-)
2026-09-25 13:10:13,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:10:13,251 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7'
2026-09-25 13:10:13,366 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:10:13,383 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 677 (Add table_histogram endpoint) 1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7'
2026-09-25 13:10:13,732 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2026-09-25 13:10:13,820 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-25 13:10:13,897 [ scc.git] DEBUG omeroweb/webgateway/urls.py | 11 +++++
2026-09-25 13:10:13,897 [ scc.git] DEBUG omeroweb/webgateway/views.py | 108 +++++++++++++++++++++++++++++++++++++++----
2026-09-25 13:10:13,897 [ scc.git] DEBUG 2 files changed, 109 insertions(+), 10 deletions(-)
2026-09-25 13:10:14,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:10:14,097 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2e6b8720dd1d8506d474bf40e282184270ae2634'
2026-09-25 13:10:14,222 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:10:14,237 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 682 (Initial support for JSON api /annotations endpoint) 2e6b8720dd1d8506d474bf40e282184270ae2634'
2026-09-25 13:10:14,592 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-25 13:10:14,673 [ scc.git] DEBUG omeroweb/api/urls.py | 22 ++++++++++
2026-09-25 13:10:14,674 [ scc.git] DEBUG omeroweb/api/views.py | 115 +++++++++++++++++++++++++++++++++++++++++++++++++-
2026-09-25 13:10:14,674 [ scc.git] DEBUG 2 files changed, 136 insertions(+), 1 deletion(-)
2026-09-25 13:10:14,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:10:14,871 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8dbf1c22784a7faaa1db2ff9d5150edbc823e575'
2026-09-25 13:10:15,001 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:10:15,015 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 684 (add config "omero.web.annotation_order") 8dbf1c22784a7faaa1db2ff9d5150edbc823e575'
2026-09-25 13:10:15,412 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-25 13:10:15,494 [ scc.git] DEBUG omeroweb/settings.py | 21 +++++++++++++++++++++
2026-09-25 13:10:15,494 [ scc.git] DEBUG omeroweb/webclient/tree.py | 27 ++++++++++++++++++++++++++-
2026-09-25 13:10:15,494 [ scc.git] DEBUG 2 files changed, 47 insertions(+), 1 deletion(-)
2026-09-25 13:10:15,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:10:15,683 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-25 13:10:15,806 [ scc.git] DEBUG Get sha1 of %s
2026-09-25 13:10:15,806 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-25 13:10:15,819 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-25 13:10:15,928 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-25 13:10:16,089 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd62495e2d0> has no local changes
2026-09-25 13:10:16,090 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 687 TorecLuik 'Preserve formatting in script activity messages' (user: TorecLuik)
- PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
Updating 675d57fd7..bf6d9d923
Previously merged:
- PR 691 sbesson 'Honor the configured login view when redirecting as the public user'
- PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
- PR 688 pwalczysko 'Fix formatting and linting failures'
- PR 683 will-moore 'Post data save imgRdef'
- PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
- PR 679 knabar 'Allow POST requests from public user for specific URLs'
- PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
- PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 613 will-moore 'externalInfo display'
- PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
- PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
- PR 655 will-moore 'Handle invalid group id in switch_active_group'
- PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
- PR 664 knabar 'Pin django-pipeline to a recent version'
- PR 658 will-moore 'Description scrollable if taller than 350px'
- PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
- PR 646 knabar 'Force Django 5.2 in next release'
- PR 639 Rdornier 'Split view user label'
- PR 662 jburel 'Add gunicorn doc links'
- PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
- PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
- PR 648 will-moore 'hide scrollbar for top-links'
- PR 647 jburel 'Replace manual changelog by automated GH release step'
- PR 645 knabar 'Update changelog for 5.30.0 release'
- PR 637 knabar 'Upgrade to Django 5.2 '
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 628 jburel 'Add protocol required since Django4'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Merged PRs:
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 643 will-moore 'Don't disable the histogram for big images'
- PR 644 jo-mueller 'Add some install instructions for windows'
- PR 677 will-moore 'Add table_histogram endpoint'
- PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
- PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
Generated by OMERO-python-superbuild-push#79 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/79/)'
2026-09-25 13:10:16,296 [ scc.git] DEBUG [detached HEAD 5425848e3] merge master -Dorg -Ssuccess-only
2026-09-25 13:10:16,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-25 13:10:16,298 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-25 13:10:16,438 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2026-09-25 13:10:16,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:10:16,669 [ scc.config] DEBUG Found submodule.omero-marshal.url
2026-09-25 13:10:17,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:10:17,101 [ scc.config] DEBUG Found submodule.omero-py.url
2026-09-25 13:10:17,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:10:17,591 [ scc.config] DEBUG Found submodule.omero-scripts.url
2026-09-25 13:10:17,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:10:18,027 [ scc.config] DEBUG Found submodule.omero-web.url
2026-09-25 13:10:18,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-25 13:10:18,469 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-25 13:10:19,192 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd624e42490> has local changes
2026-09-25 13:10:19,192 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
- PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
- PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
- PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
Repository: ome/omero-dropbox
Already up to date.
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Updating a3dd99b..f8ff1c2
Previously merged:
- PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
- PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
- PR 69 will-moore 'Roi encoder allows Shape None'
- PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
Updating b44120b5..8990768d
Previously merged:
- PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
- PR 498 sbesson 'Upgrade GitHub actions'
- PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
- PR 496 will-moore 'Fix ice-3.6 download link in README'
- PR 199 joshmoore 'user: allow setting default group'
- PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
- PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
- PR 491 kkoz 'First pass at better cleanse dry-run output'
- PR 490 sbesson 'Remove support from Python 3.9'
- PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
Merged PRs:
- PR 391 joshmoore 'Add jstack command'
- PR 459 Tom-TBT 'Wrapper improvements for ROIs'
Repository: ome/omero-scripts
Updating 03b9116..5b4d768
Previously merged:
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
Merged PRs:
- PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
Repository: ome/omero-web
Excluded PRs:
- PR 687 TorecLuik 'Preserve formatting in script activity messages' (user: TorecLuik)
- PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
Updating 675d57fd7..bf6d9d923
Previously merged:
- PR 691 sbesson 'Honor the configured login view when redirecting as the public user'
- PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
- PR 688 pwalczysko 'Fix formatting and linting failures'
- PR 683 will-moore 'Post data save imgRdef'
- PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
- PR 679 knabar 'Allow POST requests from public user for specific URLs'
- PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
- PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 613 will-moore 'externalInfo display'
- PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
- PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
- PR 655 will-moore 'Handle invalid group id in switch_active_group'
- PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
- PR 664 knabar 'Pin django-pipeline to a recent version'
- PR 658 will-moore 'Description scrollable if taller than 350px'
- PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
- PR 646 knabar 'Force Django 5.2 in next release'
- PR 639 Rdornier 'Split view user label'
- PR 662 jburel 'Add gunicorn doc links'
- PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
- PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
- PR 648 will-moore 'hide scrollbar for top-links'
- PR 647 jburel 'Replace manual changelog by automated GH release step'
- PR 645 knabar 'Update changelog for 5.30.0 release'
- PR 637 knabar 'Upgrade to Django 5.2 '
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 628 jburel 'Add protocol required since Django4'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Merged PRs:
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 643 will-moore 'Don't disable the histogram for big images'
- PR 644 jo-mueller 'Add some install instructions for windows'
- PR 677 will-moore 'Add table_histogram endpoint'
- PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
- PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
Generated by OMERO-python-superbuild-push#79 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/79/)'
2026-09-25 13:10:19,478 [ scc.git] DEBUG [detached HEAD 14bee7f] merge master -Dorg -Ssuccess-only
2026-09-25 13:10:19,478 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2026-09-25 13:10:19,480 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2026-09-25 13:10:19,480 [ scc.merge] INFO Already up to date.
2026-09-25 13:10:19,480 [ scc.merge] INFO
2026-09-25 13:10:19,480 [ scc.merge] INFO Merged PRs:
2026-09-25 13:10:19,480 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-09-25 13:10:19,480 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-09-25 13:10:19,480 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-09-25 13:10:19,480 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-09-25 13:10:19,480 [ scc.merge] INFO
2026-09-25 13:10:19,480 [ scc.merge] INFO Repository: ome/omero-dropbox
2026-09-25 13:10:19,480 [ scc.merge] INFO Already up to date.
2026-09-25 13:10:19,480 [ scc.merge] INFO
2026-09-25 13:10:19,480 [ scc.merge] INFO
2026-09-25 13:10:19,480 [ scc.merge] INFO Repository: ome/omero-marshal
2026-09-25 13:10:19,480 [ scc.merge] INFO Excluded PRs:
2026-09-25 13:10:19,480 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
2026-09-25 13:10:19,480 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2026-09-25 13:10:19,480 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2026-09-25 13:10:19,480 [ scc.merge] INFO Updating a3dd99b..f8ff1c2
2026-09-25 13:10:19,481 [ scc.merge] INFO Previously merged:
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
2026-09-25 13:10:19,481 [ scc.merge] INFO
2026-09-25 13:10:19,481 [ scc.merge] INFO
2026-09-25 13:10:19,481 [ scc.merge] INFO Repository: ome/omero-py
2026-09-25 13:10:19,481 [ scc.merge] INFO Excluded PRs:
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric)
2026-09-25 13:10:19,481 [ scc.merge] INFO Updating b44120b5..8990768d
2026-09-25 13:10:19,481 [ scc.merge] INFO Previously merged:
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 498 sbesson 'Upgrade GitHub actions'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 496 will-moore 'Fix ice-3.6 download link in README'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 491 kkoz 'First pass at better cleanse dry-run output'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 490 sbesson 'Remove support from Python 3.9'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
2026-09-25 13:10:19,481 [ scc.merge] INFO
2026-09-25 13:10:19,481 [ scc.merge] INFO Merged PRs:
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs'
2026-09-25 13:10:19,481 [ scc.merge] INFO
2026-09-25 13:10:19,481 [ scc.merge] INFO Repository: ome/omero-scripts
2026-09-25 13:10:19,481 [ scc.merge] INFO Updating 03b9116..5b4d768
2026-09-25 13:10:19,481 [ scc.merge] INFO Previously merged:
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 231 jburel 'Create Release '
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix'
2026-09-25 13:10:19,481 [ scc.merge] INFO
2026-09-25 13:10:19,481 [ scc.merge] INFO Merged PRs:
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
2026-09-25 13:10:19,481 [ scc.merge] INFO
2026-09-25 13:10:19,481 [ scc.merge] INFO Repository: ome/omero-web
2026-09-25 13:10:19,481 [ scc.merge] INFO Excluded PRs:
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 687 TorecLuik 'Preserve formatting in script activity messages' (user: TorecLuik)
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
2026-09-25 13:10:19,481 [ scc.merge] INFO Updating 675d57fd7..bf6d9d923
2026-09-25 13:10:19,481 [ scc.merge] INFO Previously merged:
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 691 sbesson 'Honor the configured login view when redirecting as the public user'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 688 pwalczysko 'Fix formatting and linting failures'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 683 will-moore 'Post data save imgRdef'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 679 knabar 'Allow POST requests from public user for specific URLs'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 655 will-moore 'Handle invalid group id in switch_active_group'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 664 knabar 'Pin django-pipeline to a recent version'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 658 will-moore 'Description scrollable if taller than 350px'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 646 knabar 'Force Django 5.2 in next release'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 639 Rdornier 'Split view user label'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 662 jburel 'Add gunicorn doc links'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 648 will-moore 'hide scrollbar for top-links'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 647 jburel 'Replace manual changelog by automated GH release step'
2026-09-25 13:10:19,481 [ scc.merge] INFO - PR 645 knabar 'Update changelog for 5.30.0 release'
2026-09-25 13:10:19,482 [ scc.merge] INFO - PR 637 knabar 'Upgrade to Django 5.2 '
2026-09-25 13:10:19,482 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-25 13:10:19,482 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4'
2026-09-25 13:10:19,482 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins'
2026-09-25 13:10:19,482 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2026-09-25 13:10:19,482 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2026-09-25 13:10:19,482 [ scc.merge] INFO
2026-09-25 13:10:19,482 [ scc.merge] INFO Merged PRs:
2026-09-25 13:10:19,482 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations'
2026-09-25 13:10:19,482 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf'
2026-09-25 13:10:19,482 [ scc.merge] INFO - PR 643 will-moore 'Don't disable the histogram for big images'
2026-09-25 13:10:19,482 [ scc.merge] INFO - PR 644 jo-mueller 'Add some install instructions for windows'
2026-09-25 13:10:19,482 [ scc.merge] INFO - PR 677 will-moore 'Add table_histogram endpoint'
2026-09-25 13:10:19,482 [ scc.merge] INFO - PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
2026-09-25 13:10:19,482 [ scc.merge] INFO - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
2026-09-25 13:10:19,482 [ scc.merge] INFO
2026-09-25 13:10:19,482 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-09-25 13:10:19,482 [ scc.git] DEBUG Calling 'git remote'
2026-09-25 13:10:19,496 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-09-25 13:10:19,496 [ scc.git] DEBUG Calling 'git remote'
2026-09-25 13:10:19,511 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-25 13:10:19,511 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-09-25 13:10:19,512 [ scc.git] DEBUG Calling 'git remote'
2026-09-25 13:10:19,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-25 13:10:19,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-09-25 13:10:19,525 [ scc.git] DEBUG Calling 'git remote'
2026-09-25 13:10:19,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-25 13:10:19,542 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-09-25 13:10:19,542 [ scc.git] DEBUG Calling 'git remote'
2026-09-25 13:10:19,556 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-25 13:10:19,556 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-09-25 13:10:19,556 [ scc.git] DEBUG Calling 'git remote'
2026-09-25 13:10:19,573 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from ac93ed4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from a3dd99b
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from b44120b5
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 03b9116
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 675d57fd7
nothing to commit, working tree clean
HEAD detached from b68c3cf
nothing to commit, working tree clean
2026-09-25 13:11:01,687 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
