Console

01:40:02 Started by upstream project "Trigger" build number 46
01:40:02 originally caused by:
01:40:02  Started by timer
01:40:02 Running as SYSTEM
01:40:02 Building remotely on omero (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-server
01:40:02 [OMERO-server] $ /bin/bash -xe /tmp/jenkins6014519017299582685.sh
01:40:02 + source /home/settings.env
01:40:02 ++ OMERO_DB_HOST=pg
01:40:02 ++ OMERO_DB_USER=postgres
01:40:02 ++ OMERO_DB_PASS=
01:40:02 ++ OMERO_ROOT_PASS=omero
01:40:02 ++ OMERO_DATA_DIR=/OMERO
01:40:02 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
01:40:02 + OMERO_DB_NAME=OMERO-server
01:40:02 + OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server
01:40:02 + export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
01:40:02 + OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
01:40:02 + OMERO_DATA_DIR=/home/omero/omero-server-data
01:40:02 + '[' -e /home/omero/workspace/OMERO-server/OMERO.server ']'
01:40:02 + source /home/omero/workspace/OMERO-server/.venv3/bin/activate
01:40:02 ++ deactivate nondestructive
01:40:02 ++ '[' -n '' ']'
01:40:02 ++ '[' -n '' ']'
01:40:02 ++ hash -r
01:40:02 ++ '[' -n '' ']'
01:40:02 ++ unset VIRTUAL_ENV
01:40:02 ++ unset VIRTUAL_ENV_PROMPT
01:40:02 ++ '[' '!' nondestructive = nondestructive ']'
01:40:02 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3
01:40:02 ++ export VIRTUAL_ENV
01:40:02 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:40:02 ++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:40:02 ++ export PATH
01:40:02 ++ '[' -n '' ']'
01:40:02 ++ '[' -z '' ']'
01:40:02 ++ _OLD_VIRTUAL_PS1=
01:40:02 ++ PS1='(.venv3) '
01:40:02 ++ export PS1
01:40:02 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
01:40:02 ++ export VIRTUAL_ENV_PROMPT
01:40:02 ++ hash -r
01:40:02 + omero admin stop
01:40:14 Waiting on shutdown. Use CTRL-C to exit
01:40:14 .+ sleep 5
01:40:29 + deactivate
01:40:29 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
01:40:29 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:40:29 + export PATH
01:40:29 + unset _OLD_VIRTUAL_PATH
01:40:29 + '[' -n '' ']'
01:40:29 + hash -r
01:40:29 + '[' -n '' ']'
01:40:29 + unset VIRTUAL_ENV
01:40:29 + unset VIRTUAL_ENV_PROMPT
01:40:29 + '[' '!' '' = nondestructive ']'
01:40:29 + unset -f deactivate
01:40:29 + rm -rf /home/omero/workspace/OMERO-server/.venv3
01:42:56 + python3.11 -m venv /home/omero/workspace/OMERO-server/.venv3
01:43:17 + '[' false = true ']'
01:43:17 + echo 'Skipping PURGE_DATA:CleanDbAndRepo'
01:43:17 Skipping PURGE_DATA:CleanDbAndRepo
01:43:17 + rm -rf /home/omero/workspace/OMERO-server/omero-blitz-5.8.6-SNAPSHOT-python.zip /home/omero/workspace/OMERO-server/omero_dropbox-5.7.1.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_marshal-0.9.2.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_py-5.23.1.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_scripts-5.10.1.dev0.tar.gz /home/omero/workspace/OMERO-server/OMERO.server /home/omero/workspace/OMERO-server/omero_web-5.32.1.dev0.tar.gz /home/omero/workspace/OMERO-server/version.properties
01:43:23 Copied 1 artifact from "OMERO-build" build number 37
01:43:23 Copied 5 artifacts from "OMERO-python-superbuild-build" build number 31
01:43:24 Copied 2 artifacts from "OMERO-build-build" build number 43
01:43:24 [OMERO-server] $ /bin/bash -xe /tmp/jenkins17218622726039585706.sh
01:43:24 + source /home/settings.env
01:43:24 ++ OMERO_DB_HOST=pg
01:43:24 ++ OMERO_DB_USER=postgres
01:43:24 ++ OMERO_DB_PASS=
01:43:24 ++ OMERO_ROOT_PASS=omero
01:43:24 ++ OMERO_DATA_DIR=/OMERO
01:43:24 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
01:43:24 + OMERO_DB_NAME=OMERO-server
01:43:24 + OMERO_DATA_DIR=/home/omero/omero-server-data
01:43:24 + mkdir -p /home/omero/omero-server-data
01:43:24 + OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server
01:43:24 + export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
01:43:24 + OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
01:43:24 + export ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip
01:43:24 + ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip
01:43:24 + export VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties
01:43:24 + VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties
01:43:24 ++ ls OMERO.server-5.6.3-637-651be86f17-ice36-b37.zip
01:43:24 + ZIP=OMERO.server-5.6.3-637-651be86f17-ice36-b37.zip
01:43:24 + '[' '!' -z '' ']'
01:43:24 + DIST=OMERO.server-5.6.3-637-651be86f17-ice36-b37
01:43:24 + unzip OMERO.server-5.6.3-637-651be86f17-ice36-b37.zip
01:43:24 Archive:  OMERO.server-5.6.3-637-651be86f17-ice36-b37.zip
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/blitz/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/grid/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/profiles/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/templates/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/templates/error/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/templates/grid/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/scripts/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/scripts/luts/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/scripts/luts/janelia/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/scripts/luts/matplotlib/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/scripts/luts/ncsa_paledit/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/scripts/luts/seaborn/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/scripts/luts/wcif/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/scripts/omero/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/scripts/omero/analysis_scripts/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/scripts/omero/annotation_scripts/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/scripts/omero/export_scripts/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/scripts/omero/figure_scripts/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/scripts/omero/import_scripts/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/scripts/omero/util_scripts/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/server/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/share/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/share/licenses/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/misc/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO3A__1/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO3A__10/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO3A__11/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO3A__2/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO3A__3/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO3A__4/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO3A__5/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO3A__6/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO3A__7/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO3A__8/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO3A__9/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO3__4/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO3__5/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO3__6/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO3__7/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO4.1__0/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO4.2__0/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO4.2__0/t/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO4.3__0/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO4.4__0/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO4__0/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.0__0/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.1__1/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.2__0/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.3__0/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.4DEV__1/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.4DEV__2/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.4DEV__3/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.4__0/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/var/
01:43:24    creating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/var/tmp/
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/LICENSE.txt  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/backup.cfg  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/blitz/mail-senders.example  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/blitz/mail-server.example  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/build.properties  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/env.bat  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/env.sh  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/hibernate.properties  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/ice.config  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/logback-cli.xml  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/logback-indexing-cli.xml  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/logback-indexing.xml  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/logback.xml  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/mime.types  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/node1.cfg  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/node2.cfg  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/omero.properties  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/profiles/psql  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/rollover.cfg  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/templates/Windows.cfg  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/templates/error/maintainance.html  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/templates/grid/README  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/templates/grid/default.xml  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/templates/grid/templates.xml  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/templates/grid/windefault.xml  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/templates/ice.config  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/templates/internal.cfg  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/templates/master.cfg  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/templates/robot.template  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/etc/testdropbox.config  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/history.rst  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/OMEZarrReader.jar  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/accessors-smart.jar  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/activation.jar  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/aggdesigner-algorithm.jar  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/aircompressor.jar  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/antlr.jar  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/aopalliance.jar  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/apiguardian-api.jar  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/asm.jar  
01:43:24   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/avatica-core.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/avatica-metrics.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/aws-java-sdk-core.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/aws-java-sdk-kms.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/aws-java-sdk-s3.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/base.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/batik-anim.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/batik-awt-util.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/batik-bridge.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/batik-codec.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/batik-constants.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/batik-css.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/batik-dom.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/batik-ext.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/batik-gvt.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/batik-i18n.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/batik-parser.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/batik-script.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/batik-shared-resources.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/batik-svg-dom.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/batik-svggen.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/batik-transcoder.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/batik-util.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/batik-xml.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/btm.jar  
01:43:25   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/lib/client/calcite-core.jar  
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01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.1__1/OMERO5.0__0.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.1__1/OMERO5.1__0.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.2__0/OMERO5.1__1.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.3__0/OMERO5.2__0.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.3__0/delete-ns-orphans.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.3__0/reverse_shape_color_argb_to_rgba.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.4__0/OMERO5.3__0.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.4__0/OMERO5.3__1.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.4__0/psql-footer.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.4__0/psql-header.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.4__0/schema.sql  
01:43:38   inflating: OMERO.server-5.6.3-637-651be86f17-ice36-b37/sql/psql/OMERO5.4__0/views.sql  
01:43:39 + rm -f OMERO.server-5.6.3-637-651be86f17-ice36-b37.zip
01:43:39 + mv /home/omero/workspace/OMERO-server/OMERO.server-5.6.3-637-651be86f17-ice36-b37 /home/omero/workspace/OMERO-server/OMERO.server
01:43:39 + source /home/omero/workspace/OMERO-server/.venv3/bin/activate
01:43:39 ++ deactivate nondestructive
01:43:39 ++ '[' -n '' ']'
01:43:39 ++ '[' -n '' ']'
01:43:39 ++ hash -r
01:43:39 ++ '[' -n '' ']'
01:43:39 ++ unset VIRTUAL_ENV
01:43:39 ++ unset VIRTUAL_ENV_PROMPT
01:43:39 ++ '[' '!' nondestructive = nondestructive ']'
01:43:39 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3
01:43:39 ++ export VIRTUAL_ENV
01:43:39 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:43:39 ++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:43:39 ++ export PATH
01:43:39 ++ '[' -n '' ']'
01:43:39 ++ '[' -z '' ']'
01:43:39 ++ _OLD_VIRTUAL_PS1=
01:43:39 ++ PS1='(.venv3) '
01:43:39 ++ export PS1
01:43:39 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
01:43:39 ++ export VIRTUAL_ENV_PROMPT
01:43:39 ++ hash -r
01:43:39 + pip install -U pip
01:43:40 Requirement already satisfied: pip in ./.venv3/lib64/python3.11/site-packages (22.3.1)
01:43:40 Collecting pip
01:43:40   Using cached pip-26.2.1-py3-none-any.whl (1.8 MB)
01:43:40 Installing collected packages: pip
01:43:40   Attempting uninstall: pip
01:43:40     Found existing installation: pip 22.3.1
01:43:41     Uninstalling pip-22.3.1:
01:43:41       Successfully uninstalled pip-22.3.1
01:43:56 Successfully installed pip-26.2.1
01:43:56 + pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl
01:43:57 Collecting zeroc-ice==3.6.5
01:43:57   Downloading zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
01:44:00      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 13.6 MB/s  0:00:02
01:44:00 Installing collected packages: zeroc-ice
01:44:04 Successfully installed zeroc-ice-3.6.5
01:44:04 + pip install markdown
01:44:05 Collecting markdown
01:44:05   Using cached markdown-3.10.3-py3-none-any.whl.metadata (5.1 kB)
01:44:05 Using cached markdown-3.10.3-py3-none-any.whl (110 kB)
01:44:05 Installing collected packages: markdown
01:44:06 Successfully installed markdown-3.10.3
01:44:06 + pip install reportlab
01:44:07 Collecting reportlab
01:44:07   Using cached reportlab-5.0.0-py3-none-any.whl.metadata (1.6 kB)
01:44:07 Collecting pillow>=9.0.0 (from reportlab)
01:44:07   Using cached pillow-12.3.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (9.1 kB)
01:44:08 Collecting charset-normalizer (from reportlab)
01:44:08   Using cached charset_normalizer-3.4.9-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (41 kB)
01:44:08 Using cached reportlab-5.0.0-py3-none-any.whl (2.0 MB)
01:44:08 Using cached pillow-12.3.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (6.9 MB)
01:44:08 Using cached charset_normalizer-3.4.9-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (221 kB)
01:44:08 Installing collected packages: pillow, charset-normalizer, reportlab
01:44:17 
01:44:17 Successfully installed charset-normalizer-3.4.9 pillow-12.3.0 reportlab-5.0.0
01:44:17 + pip install omego
01:44:18 Collecting omego
01:44:18   Using cached omego-0.8.0-py3-none-any.whl.metadata (1.9 kB)
01:44:18 Collecting future (from omego)
01:44:18   Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
01:44:18 Collecting yaclifw>=0.1.1 (from omego)
01:44:18   Using cached yaclifw-0.2.0-py3-none-any.whl
01:44:18 Collecting six (from yaclifw>=0.1.1->omego)
01:44:18   Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
01:44:19 Using cached omego-0.8.0-py3-none-any.whl (41 kB)
01:44:19 Using cached future-1.0.0-py3-none-any.whl (491 kB)
01:44:19 Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
01:44:19 Installing collected packages: six, future, yaclifw, omego
01:44:24 
01:44:24 Successfully installed future-1.0.0 omego-0.8.0 six-1.17.0 yaclifw-0.2.0
01:44:24 + pip install tables
01:44:25 Collecting tables
01:44:25   Using cached tables-3.11.1-cp311-abi3-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.1 kB)
01:44:26 Collecting numpy>=1.20.0 (from tables)
01:44:26   Using cached numpy-2.4.6-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (6.6 kB)
01:44:26 Collecting numexpr>=2.6.2 (from tables)
01:44:26   Using cached numexpr-2.14.2-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (9.0 kB)
01:44:26 Collecting packaging (from tables)
01:44:26   Using cached packaging-26.3-py3-none-any.whl.metadata (3.5 kB)
01:44:26 Collecting py-cpuinfo (from tables)
01:44:26   Using cached py_cpuinfo-9.0.0-py3-none-any.whl.metadata (794 bytes)
01:44:27 Collecting blosc2>=2.3.0 (from tables)
01:44:27   Using cached blosc2-4.10.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (7.8 kB)
01:44:27 Collecting ndindex (from blosc2>=2.3.0->tables)
01:44:27   Using cached ndindex-1.10.1-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (3.6 kB)
01:44:27 Collecting msgpack (from blosc2>=2.3.0->tables)
01:44:27   Using cached msgpack-1.2.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (8.3 kB)
01:44:27 Collecting pydantic (from blosc2>=2.3.0->tables)
01:44:27   Using cached pydantic-2.13.4-py3-none-any.whl.metadata (109 kB)
01:44:27 Collecting httpx[http2] (from blosc2>=2.3.0->tables)
01:44:27   Using cached httpx-0.28.1-py3-none-any.whl.metadata (7.1 kB)
01:44:28 Collecting rich (from blosc2>=2.3.0->tables)
01:44:28   Using cached rich-15.0.0-py3-none-any.whl.metadata (18 kB)
01:44:28 Collecting threadpoolctl (from blosc2>=2.3.0->tables)
01:44:28   Using cached threadpoolctl-3.6.0-py3-none-any.whl.metadata (13 kB)
01:44:28 Collecting anyio (from httpx[http2]->blosc2>=2.3.0->tables)
01:44:28   Using cached anyio-4.14.2-py3-none-any.whl.metadata (4.6 kB)
01:44:28 Collecting certifi (from httpx[http2]->blosc2>=2.3.0->tables)
01:44:28   Using cached certifi-2026.7.22-py3-none-any.whl.metadata (2.5 kB)
01:44:28 Collecting httpcore==1.* (from httpx[http2]->blosc2>=2.3.0->tables)
01:44:28   Using cached httpcore-1.0.9-py3-none-any.whl.metadata (21 kB)
01:44:28 Collecting idna (from httpx[http2]->blosc2>=2.3.0->tables)
01:44:28   Using cached idna-3.18-py3-none-any.whl.metadata (6.1 kB)
01:44:28 Collecting h2<5,>=3 (from httpx[http2]->blosc2>=2.3.0->tables)
01:44:28   Using cached h2-4.4.1-py3-none-any.whl.metadata (3.8 kB)
01:44:28 Collecting hyperframe<7,>=6.1 (from h2<5,>=3->httpx[http2]->blosc2>=2.3.0->tables)
01:44:28   Using cached hyperframe-6.1.0-py3-none-any.whl.metadata (4.3 kB)
01:44:29 Collecting hpack<5,>=4.2 (from h2<5,>=3->httpx[http2]->blosc2>=2.3.0->tables)
01:44:29   Using cached hpack-4.2.0-py3-none-any.whl.metadata (3.3 kB)
01:44:29 Collecting h11>=0.16 (from httpcore==1.*->httpx[http2]->blosc2>=2.3.0->tables)
01:44:29   Using cached h11-0.16.0-py3-none-any.whl.metadata (8.3 kB)
01:44:29 Collecting typing_extensions>=4.5 (from anyio->httpx[http2]->blosc2>=2.3.0->tables)
01:44:29   Using cached typing_extensions-4.16.0-py3-none-any.whl.metadata (3.3 kB)
01:44:29 Collecting annotated-types>=0.6.0 (from pydantic->blosc2>=2.3.0->tables)
01:44:29   Using cached annotated_types-0.8.0-py3-none-any.whl.metadata (15 kB)
01:44:30 Collecting pydantic-core==2.46.4 (from pydantic->blosc2>=2.3.0->tables)
01:44:30   Using cached pydantic_core-2.46.4-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB)
01:44:30 Collecting typing-inspection>=0.4.2 (from pydantic->blosc2>=2.3.0->tables)
01:44:30   Using cached typing_inspection-0.4.2-py3-none-any.whl.metadata (2.6 kB)
01:44:30 Collecting markdown-it-py>=2.2.0 (from rich->blosc2>=2.3.0->tables)
01:44:30   Using cached markdown_it_py-4.2.0-py3-none-any.whl.metadata (7.4 kB)
01:44:30 Collecting pygments<3.0.0,>=2.13.0 (from rich->blosc2>=2.3.0->tables)
01:44:30   Using cached pygments-2.20.0-py3-none-any.whl.metadata (2.5 kB)
01:44:30 Collecting mdurl~=0.1 (from markdown-it-py>=2.2.0->rich->blosc2>=2.3.0->tables)
01:44:30   Using cached mdurl-0.1.2-py3-none-any.whl.metadata (1.6 kB)
01:44:30 Using cached tables-3.11.1-cp311-abi3-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (7.2 MB)
01:44:30 Using cached blosc2-4.10.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (7.4 MB)
01:44:30 Using cached numexpr-2.14.2-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (443 kB)
01:44:30 Using cached numpy-2.4.6-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.9 MB)
01:44:30 Using cached httpx-0.28.1-py3-none-any.whl (73 kB)
01:44:30 Using cached h2-4.4.1-py3-none-any.whl (62 kB)
01:44:30 Using cached hpack-4.2.0-py3-none-any.whl (34 kB)
01:44:30 Using cached httpcore-1.0.9-py3-none-any.whl (78 kB)
01:44:30 Using cached hyperframe-6.1.0-py3-none-any.whl (13 kB)
01:44:30 Using cached h11-0.16.0-py3-none-any.whl (37 kB)
01:44:31 Using cached anyio-4.14.2-py3-none-any.whl (125 kB)
01:44:31 Using cached idna-3.18-py3-none-any.whl (65 kB)
01:44:31 Using cached typing_extensions-4.16.0-py3-none-any.whl (45 kB)
01:44:31 Using cached certifi-2026.7.22-py3-none-any.whl (136 kB)
01:44:31 Using cached msgpack-1.2.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (423 kB)
01:44:31 Using cached ndindex-1.10.1-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (516 kB)
01:44:31 Using cached packaging-26.3-py3-none-any.whl (129 kB)
01:44:31 Using cached py_cpuinfo-9.0.0-py3-none-any.whl (22 kB)
01:44:31 Using cached pydantic-2.13.4-py3-none-any.whl (472 kB)
01:44:31 Using cached pydantic_core-2.46.4-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (2.1 MB)
01:44:31 Using cached annotated_types-0.8.0-py3-none-any.whl (13 kB)
01:44:31 Using cached typing_inspection-0.4.2-py3-none-any.whl (14 kB)
01:44:31 Using cached rich-15.0.0-py3-none-any.whl (310 kB)
01:44:31 Using cached pygments-2.20.0-py3-none-any.whl (1.2 MB)
01:44:31 Using cached markdown_it_py-4.2.0-py3-none-any.whl (91 kB)
01:44:31 Using cached mdurl-0.1.2-py3-none-any.whl (10.0 kB)
01:44:31 Using cached threadpoolctl-3.6.0-py3-none-any.whl (18 kB)
01:44:31 Installing collected packages: py-cpuinfo, typing_extensions, threadpoolctl, pygments, packaging, numpy, ndindex, msgpack, mdurl, idna, hyperframe, hpack, h11, certifi, annotated-types, typing-inspection, pydantic-core, numexpr, markdown-it-py, httpcore, h2, anyio, rich, pydantic, httpx, blosc2, tables
01:45:19 
01:45:19 Successfully installed annotated-types-0.8.0 anyio-4.14.2 blosc2-4.10.0 certifi-2026.7.22 h11-0.16.0 h2-4.4.1 hpack-4.2.0 httpcore-1.0.9 httpx-0.28.1 hyperframe-6.1.0 idna-3.18 markdown-it-py-4.2.0 mdurl-0.1.2 msgpack-1.2.1 ndindex-1.10.1 numexpr-2.14.2 numpy-2.4.6 packaging-26.3 py-cpuinfo-9.0.0 pydantic-2.13.4 pydantic-core-2.46.4 pygments-2.20.0 rich-15.0.0 tables-3.11.1 threadpoolctl-3.6.0 typing-inspection-0.4.2 typing_extensions-4.16.0
01:45:19 + pip install jinja2
01:45:20 Collecting jinja2
01:45:20   Using cached jinja2-3.1.6-py3-none-any.whl.metadata (2.9 kB)
01:45:21 Collecting MarkupSafe>=2.0 (from jinja2)
01:45:21   Using cached markupsafe-3.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.7 kB)
01:45:21 Using cached jinja2-3.1.6-py3-none-any.whl (134 kB)
01:45:21 Using cached markupsafe-3.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (22 kB)
01:45:21 Installing collected packages: MarkupSafe, jinja2
01:45:22 
01:45:22 Successfully installed MarkupSafe-3.0.3 jinja2-3.1.6
01:45:22 + pip install omero-py
01:45:23 Collecting omero-py
01:45:23   Using cached omero_py-5.23.0-py3-none-any.whl.metadata (6.5 kB)
01:45:23 Collecting appdirs (from omero-py)
01:45:23   Using cached appdirs-1.4.4-py2.py3-none-any.whl.metadata (9.0 kB)
01:45:23 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py) (1.0.0)
01:45:23 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (2.4.6)
01:45:23 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (12.3.0)
01:45:23 Collecting PyYAML (from omero-py)
01:45:23   Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB)
01:45:23 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (3.6.5)
01:45:23 Collecting requests (from omero-py)
01:45:23   Using cached requests-2.34.2-py3-none-any.whl.metadata (4.8 kB)
01:45:23 Collecting portalocker (from omero-py)
01:45:23   Using cached portalocker-4.1.0-py3-none-any.whl.metadata (11 kB)
01:45:23 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (3.4.9)
01:45:23 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (3.18)
01:45:24 Collecting urllib3<3,>=1.26 (from requests->omero-py)
01:45:24   Using cached urllib3-2.7.0-py3-none-any.whl.metadata (6.9 kB)
01:45:24 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (2026.7.22)
01:45:24 Using cached omero_py-5.23.0-py3-none-any.whl (2.8 MB)
01:45:24 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
01:45:24 Using cached portalocker-4.1.0-py3-none-any.whl (65 kB)
01:45:24 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
01:45:24 Using cached requests-2.34.2-py3-none-any.whl (73 kB)
01:45:24 Using cached urllib3-2.7.0-py3-none-any.whl (131 kB)
01:45:24 Installing collected packages: appdirs, urllib3, PyYAML, portalocker, requests, omero-py
01:45:42 
01:45:42 Successfully installed PyYAML-6.0.3 appdirs-1.4.4 omero-py-5.23.0 portalocker-4.1.0 requests-2.34.2 urllib3-2.7.0
01:45:42 + pip install git+https://github.com/snoopycrimecop/omero-metadata.git@merge_ci#egg=omero-metadata
01:45:43 Collecting omero-metadata
01:45:43   Cloning https://github.com/snoopycrimecop/omero-metadata.git (to revision merge_ci) to /tmp/pip-install-zw1j1o0_/omero-metadata_e8caae4be65a481fbd9188e19eb73c1a
01:45:43   Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-metadata.git /tmp/pip-install-zw1j1o0_/omero-metadata_e8caae4be65a481fbd9188e19eb73c1a
01:45:44   Resolved https://github.com/snoopycrimecop/omero-metadata.git to commit 498a8d3319630c9bbafc45f5791e4917008d26ab
01:45:44   Installing build dependencies: started
01:45:45   Installing build dependencies: finished with status 'done'
01:45:45   Getting requirements to build wheel: started
01:45:45   Getting requirements to build wheel: finished with status 'done'
01:45:45   Preparing metadata (pyproject.toml): started
01:45:46   Preparing metadata (pyproject.toml): finished with status 'done'
01:45:46 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-metadata) (5.23.0)
01:45:46 Collecting pandas<3,>=2 (from omero-metadata)
01:45:46   Downloading pandas-2.3.3-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (91 kB)
01:45:46 Requirement already satisfied: numpy>=1.23.2 in ./.venv3/lib64/python3.11/site-packages (from pandas<3,>=2->omero-metadata) (2.4.6)
01:45:46 Collecting python-dateutil>=2.8.2 (from pandas<3,>=2->omero-metadata)
01:45:46   Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl.metadata (8.4 kB)
01:45:46 Collecting pytz>=2020.1 (from pandas<3,>=2->omero-metadata)
01:45:46   Using cached pytz-2026.3.post1-py2.py3-none-any.whl.metadata (22 kB)
01:45:47 Collecting tzdata>=2022.7 (from pandas<3,>=2->omero-metadata)
01:45:47   Downloading tzdata-2026.3-py2.py3-none-any.whl.metadata (1.4 kB)
01:45:47 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (1.4.4)
01:45:47 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (1.0.0)
01:45:47 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (12.3.0)
01:45:47 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (6.0.3)
01:45:47 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (3.6.5)
01:45:47 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (2.34.2)
01:45:47 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (4.1.0)
01:45:47 Requirement already satisfied: six>=1.5 in ./.venv3/lib64/python3.11/site-packages (from python-dateutil>=2.8.2->pandas<3,>=2->omero-metadata) (1.17.0)
01:45:47 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.4.9)
01:45:47 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.18)
01:45:47 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (2.7.0)
01:45:47 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (2026.7.22)
01:45:47 Downloading pandas-2.3.3-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (12.8 MB)
01:45:48    ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 12.8/12.8 MB 13.0 MB/s  0:00:00
01:45:48 Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl (229 kB)
01:45:48 Using cached pytz-2026.3.post1-py2.py3-none-any.whl (508 kB)
01:45:48 Downloading tzdata-2026.3-py2.py3-none-any.whl (348 kB)
01:45:48 Building wheels for collected packages: omero-metadata
01:45:48   Building wheel for omero-metadata (pyproject.toml): started
01:45:48   Building wheel for omero-metadata (pyproject.toml): finished with status 'done'
01:45:48   Created wheel for omero-metadata: filename=omero_metadata-0.13.1.dev0-py3-none-any.whl size=39370 sha256=da2f188dc847acd0e88d8231f5a9d2c63f68f3256a57ca51db9998d5d9604993
01:45:48   Stored in directory: /tmp/pip-ephem-wheel-cache-nfi7spyf/wheels/6b/49/26/d56ff0fc3b918823c05ff86cc0686c3a577289ddc39151269b
01:45:48 Successfully built omero-metadata
01:45:48 Installing collected packages: pytz, tzdata, python-dateutil, pandas, omero-metadata
01:46:38 
01:46:39 Successfully installed omero-metadata-0.13.1.dev0 pandas-2.3.3 python-dateutil-2.9.0.post0 pytz-2026.3.post1 tzdata-2026.3
01:46:39 + pip install git+https://github.com/snoopycrimecop/omero-cli-render.git@merge_ci#egg=omero-cli-render
01:46:40 Collecting omero-cli-render
01:46:40   Cloning https://github.com/snoopycrimecop/omero-cli-render.git (to revision merge_ci) to /tmp/pip-install-8ie42c30/omero-cli-render_2d98cca01cb94096bcd9f40d9e3e9dab
01:46:40   Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-render.git /tmp/pip-install-8ie42c30/omero-cli-render_2d98cca01cb94096bcd9f40d9e3e9dab
01:46:41   Running command git checkout -b merge_ci --track origin/merge_ci
01:46:41   Switched to a new branch 'merge_ci'
01:46:41   branch 'merge_ci' set up to track 'origin/merge_ci'.
01:46:41   Resolved https://github.com/snoopycrimecop/omero-cli-render.git to commit 3627ad8f28c9f405a1acde8861763f599f6503db
01:46:41   Installing build dependencies: started
01:46:42   Installing build dependencies: finished with status 'done'
01:46:42   Getting requirements to build wheel: started
01:46:43   Getting requirements to build wheel: finished with status 'done'
01:46:43   Preparing metadata (pyproject.toml): started
01:46:43   Preparing metadata (pyproject.toml): finished with status 'done'
01:46:43 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-cli-render) (6.0.3)
01:46:43 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-render) (5.23.0)
01:46:43 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.4.4)
01:46:43 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.0.0)
01:46:43 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (2.4.6)
01:46:43 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (12.3.0)
01:46:43 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (3.6.5)
01:46:43 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (2.34.2)
01:46:43 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (4.1.0)
01:46:43 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.4.9)
01:46:43 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.18)
01:46:43 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (2.7.0)
01:46:43 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (2026.7.22)
01:46:43 Building wheels for collected packages: omero-cli-render
01:46:43   Building wheel for omero-cli-render (pyproject.toml): started
01:46:43   Building wheel for omero-cli-render (pyproject.toml): finished with status 'done'
01:46:43   Created wheel for omero-cli-render: filename=omero_cli_render-0.8.2.dev0-py3-none-any.whl size=19838 sha256=8735dc19f39d6cc4a9989d50d198267c6fc50c472155a1948e8dbf3031845623
01:46:43   Stored in directory: /tmp/pip-ephem-wheel-cache-fogso00e/wheels/cc/67/86/ff54ee10a8ea8ae7a21cceb878741010ef1de4a7d93df129ee
01:46:43 Successfully built omero-cli-render
01:46:43 Installing collected packages: omero-cli-render
01:46:43 Successfully installed omero-cli-render-0.8.2.dev0
01:46:44 + pip install git+https://github.com/snoopycrimecop/omero-cli-duplicate.git@merge_ci#egg=omero-cli-duplicate
01:46:44 Collecting omero-cli-duplicate
01:46:44   Cloning https://github.com/snoopycrimecop/omero-cli-duplicate.git (to revision merge_ci) to /tmp/pip-install-sj48ukhg/omero-cli-duplicate_d1d0d911626048c4ac21f2bda9c02be3
01:46:44   Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-duplicate.git /tmp/pip-install-sj48ukhg/omero-cli-duplicate_d1d0d911626048c4ac21f2bda9c02be3
01:46:45   Running command git checkout -b merge_ci --track origin/merge_ci
01:46:46   Switched to a new branch 'merge_ci'
01:46:46   branch 'merge_ci' set up to track 'origin/merge_ci'.
01:46:46   Resolved https://github.com/snoopycrimecop/omero-cli-duplicate.git to commit 541e5b24e558bd8e6168d758fd514e3ba50dc8cc
01:46:46   Installing build dependencies: started
01:46:47   Installing build dependencies: finished with status 'done'
01:46:47   Getting requirements to build wheel: started
01:46:47   Getting requirements to build wheel: finished with status 'done'
01:46:47   Preparing metadata (pyproject.toml): started
01:46:47   Preparing metadata (pyproject.toml): finished with status 'done'
01:46:47 Requirement already satisfied: omero-py>=5.8 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-duplicate) (5.23.0)
01:46:47 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.4.4)
01:46:47 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.0.0)
01:46:47 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.4.6)
01:46:47 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (12.3.0)
01:46:47 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (6.0.3)
01:46:47 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.6.5)
01:46:47 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.34.2)
01:46:47 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (4.1.0)
01:46:47 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.4.9)
01:46:47 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.18)
01:46:47 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2.7.0)
01:46:47 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2026.7.22)
01:46:47 Building wheels for collected packages: omero-cli-duplicate
01:46:47   Building wheel for omero-cli-duplicate (pyproject.toml): started
01:46:48   Building wheel for omero-cli-duplicate (pyproject.toml): finished with status 'done'
01:46:48   Created wheel for omero-cli-duplicate: filename=omero_cli_duplicate-0.4.1.dev0-py3-none-any.whl size=11538 sha256=69304dfe63663a3b2d72df010c40ad91c33c21aaf7645e15326b0d280282906d
01:46:48   Stored in directory: /tmp/pip-ephem-wheel-cache-tzfmfdws/wheels/28/e4/77/20667ec1be487a1994d60f59ce11eeba2ac0c8c34aea209b46
01:46:48 Successfully built omero-cli-duplicate
01:46:48 Installing collected packages: omero-cli-duplicate
01:46:48 Successfully installed omero-cli-duplicate-0.4.1.dev0
01:46:48 + pip install git+https://github.com/snoopycrimecop/omero-cli-zarr.git@merge_ci#egg=omero-cli-zarr
01:46:49 Collecting omero-cli-zarr
01:46:49   Cloning https://github.com/snoopycrimecop/omero-cli-zarr.git (to revision merge_ci) to /tmp/pip-install-hi4_g64q/omero-cli-zarr_8aad1c63efd54259ac481f2b9f7024df
01:46:49   Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-zarr.git /tmp/pip-install-hi4_g64q/omero-cli-zarr_8aad1c63efd54259ac481f2b9f7024df
01:46:50   Running command git checkout -b merge_ci --track origin/merge_ci
01:46:50   Switched to a new branch 'merge_ci'
01:46:50   branch 'merge_ci' set up to track 'origin/merge_ci'.
01:46:50   Resolved https://github.com/snoopycrimecop/omero-cli-zarr.git to commit 3f6bf2f0d9fd9b859175f01e4e5021a0a38cd6b5
01:46:50   Installing build dependencies: started
01:46:51   Installing build dependencies: finished with status 'done'
01:46:51   Getting requirements to build wheel: started
01:46:52   Getting requirements to build wheel: finished with status 'done'
01:46:52   Installing backend dependencies: started
01:46:53   Installing backend dependencies: finished with status 'done'
01:46:53   Preparing metadata (pyproject.toml): started
01:46:54   Preparing metadata (pyproject.toml): finished with status 'done'
01:46:54 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-zarr) (5.23.0)
01:46:54 Collecting ome-zarr>=0.13.0 (from omero-cli-zarr)
01:46:54   Using cached ome_zarr-0.18.0-py3-none-any.whl.metadata (2.9 kB)
01:46:54 Requirement already satisfied: numpy in ./.venv3/lib64/python3.11/site-packages (from ome-zarr>=0.13.0->omero-cli-zarr) (2.4.6)
01:46:54 Collecting dask!=2025.12.*,!=2026.1.*,!=2026.2.*,>=2025.2.0 (from ome-zarr>=0.13.0->omero-cli-zarr)
01:46:54   Using cached dask-2026.7.1-py3-none-any.whl.metadata (3.8 kB)
01:46:54 Collecting zarr>=3.0.0 (from ome-zarr>=0.13.0->omero-cli-zarr)
01:46:54   Using cached zarr-3.1.6-py3-none-any.whl.metadata (8.6 kB)
01:46:54 Collecting fsspec!=2021.07.0,!=2023.9.0,>=0.8 (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
01:46:54   Using cached fsspec-2026.7.0-py3-none-any.whl.metadata (10 kB)
01:46:55 Collecting aiohttp (from ome-zarr>=0.13.0->omero-cli-zarr)
01:46:55   Using cached aiohttp-3.14.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (8.3 kB)
01:46:55 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from ome-zarr>=0.13.0->omero-cli-zarr) (2.34.2)
01:46:55 Collecting scikit-image>=0.19.0 (from ome-zarr>=0.13.0->omero-cli-zarr)
01:46:55   Using cached scikit_image-0.26.0-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (15 kB)
01:46:55 Collecting toolz (from ome-zarr>=0.13.0->omero-cli-zarr)
01:46:55   Using cached toolz-1.1.0-py3-none-any.whl.metadata (5.1 kB)
01:46:55 Collecting rangehttpserver (from ome-zarr>=0.13.0->omero-cli-zarr)
01:46:55   Using cached rangehttpserver-1.4.0-py2.py3-none-any.whl.metadata (769 bytes)
01:46:55 Collecting ome-zarr-models>=1.6 (from ome-zarr>=0.13.0->omero-cli-zarr)
01:46:55   Using cached ome_zarr_models-1.7-py3-none-any.whl.metadata (3.0 kB)
01:46:55 Collecting Deprecated (from ome-zarr>=0.13.0->omero-cli-zarr)
01:46:55   Using cached deprecated-1.3.1-py2.py3-none-any.whl.metadata (5.9 kB)
01:46:56 Collecting click>=8.1 (from dask!=2025.12.*,!=2026.1.*,!=2026.2.*,>=2025.2.0->ome-zarr>=0.13.0->omero-cli-zarr)
01:46:56   Using cached click-8.4.2-py3-none-any.whl.metadata (2.6 kB)
01:46:56 Collecting cloudpickle>=3.0.0 (from dask!=2025.12.*,!=2026.1.*,!=2026.2.*,>=2025.2.0->ome-zarr>=0.13.0->omero-cli-zarr)
01:46:56   Using cached cloudpickle-3.1.2-py3-none-any.whl.metadata (7.1 kB)
01:46:56 Requirement already satisfied: packaging>=20.0 in ./.venv3/lib64/python3.11/site-packages (from dask!=2025.12.*,!=2026.1.*,!=2026.2.*,>=2025.2.0->ome-zarr>=0.13.0->omero-cli-zarr) (26.3)
01:46:56 Collecting partd>=1.4.0 (from dask!=2025.12.*,!=2026.1.*,!=2026.2.*,>=2025.2.0->ome-zarr>=0.13.0->omero-cli-zarr)
01:46:56   Using cached partd-1.4.2-py3-none-any.whl.metadata (4.6 kB)
01:46:56 Requirement already satisfied: pyyaml>=5.4.1 in ./.venv3/lib64/python3.11/site-packages (from dask!=2025.12.*,!=2026.1.*,!=2026.2.*,>=2025.2.0->ome-zarr>=0.13.0->omero-cli-zarr) (6.0.3)
01:46:56 Collecting importlib_metadata>=4.13.0 (from dask!=2025.12.*,!=2026.1.*,!=2026.2.*,>=2025.2.0->ome-zarr>=0.13.0->omero-cli-zarr)
01:46:56   Using cached importlib_metadata-9.0.0-py3-none-any.whl.metadata (4.5 kB)
01:46:56 Collecting s3fs>=2026.6.0 (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
01:46:56   Using cached s3fs-2026.7.0-py3-none-any.whl.metadata (1.2 kB)
01:46:56 Collecting zipp>=3.20 (from importlib_metadata>=4.13.0->dask!=2025.12.*,!=2026.1.*,!=2026.2.*,>=2025.2.0->ome-zarr>=0.13.0->omero-cli-zarr)
01:46:56   Using cached zipp-4.1.0-py3-none-any.whl.metadata (3.6 kB)
01:46:56 Collecting pydantic-zarr>=0.8.2 (from ome-zarr-models>=1.6->ome-zarr>=0.13.0->omero-cli-zarr)
01:46:56   Using cached pydantic_zarr-0.9.2-py3-none-any.whl.metadata (4.0 kB)
01:46:56 Collecting pydantic<2.13,>=2.11.5 (from ome-zarr-models>=1.6->ome-zarr>=0.13.0->omero-cli-zarr)
01:46:56   Using cached pydantic-2.12.5-py3-none-any.whl.metadata (90 kB)
01:46:56 Requirement already satisfied: annotated-types>=0.6.0 in ./.venv3/lib64/python3.11/site-packages (from pydantic<2.13,>=2.11.5->ome-zarr-models>=1.6->ome-zarr>=0.13.0->omero-cli-zarr) (0.8.0)
01:46:57 Collecting pydantic-core==2.41.5 (from pydantic<2.13,>=2.11.5->ome-zarr-models>=1.6->ome-zarr>=0.13.0->omero-cli-zarr)
01:46:57   Using cached pydantic_core-2.41.5-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (7.3 kB)
01:46:57 Requirement already satisfied: typing-extensions>=4.14.1 in ./.venv3/lib64/python3.11/site-packages (from pydantic<2.13,>=2.11.5->ome-zarr-models>=1.6->ome-zarr>=0.13.0->omero-cli-zarr) (4.16.0)
01:46:57 Requirement already satisfied: typing-inspection>=0.4.2 in ./.venv3/lib64/python3.11/site-packages (from pydantic<2.13,>=2.11.5->ome-zarr-models>=1.6->ome-zarr>=0.13.0->omero-cli-zarr) (0.4.2)
01:46:57 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (1.4.4)
01:46:57 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (1.0.0)
01:46:57 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (12.3.0)
01:46:57 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (3.6.5)
01:46:57 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (4.1.0)
01:46:57 Collecting locket (from partd>=1.4.0->dask!=2025.12.*,!=2026.1.*,!=2026.2.*,>=2025.2.0->ome-zarr>=0.13.0->omero-cli-zarr)
01:46:57   Using cached locket-1.0.0-py2.py3-none-any.whl.metadata (2.8 kB)
01:46:57 Collecting aiobotocore<4.0.0,>=2.19.0 (from s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
01:46:57   Using cached aiobotocore-3.9.0-py3-none-any.whl.metadata (30 kB)
01:46:57 Collecting aioitertools<1.0.0,>=0.5.1 (from aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
01:46:57   Using cached aioitertools-0.13.0-py3-none-any.whl.metadata (3.3 kB)
01:46:58 Collecting botocore<1.43.57,>=1.43.3 (from aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
01:46:58   Using cached botocore-1.43.56-py3-none-any.whl.metadata (5.6 kB)
01:46:58 Collecting jmespath<2.0.0,>=0.7.1 (from aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
01:46:58   Using cached jmespath-1.1.0-py3-none-any.whl.metadata (7.6 kB)
01:46:58 Collecting multidict<7.0.0,>=6.0.0 (from aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
01:46:58   Using cached multidict-6.7.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (5.3 kB)
01:46:58 Requirement already satisfied: python-dateutil<3.0.0,>=2.1 in ./.venv3/lib64/python3.11/site-packages (from aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr) (2.9.0.post0)
01:46:59 Collecting wrapt<3.0.0,>=1.10.10 (from aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
01:46:59   Using cached wrapt-2.3.0-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl.metadata (7.4 kB)
01:46:59 Collecting aiohappyeyeballs>=2.5.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
01:46:59   Using cached aiohappyeyeballs-2.7.1-py3-none-any.whl.metadata (5.9 kB)
01:46:59 Collecting aiosignal>=1.4.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
01:46:59   Using cached aiosignal-1.4.0-py3-none-any.whl.metadata (3.7 kB)
01:46:59 Collecting attrs>=17.3.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
01:46:59   Using cached attrs-26.1.0-py3-none-any.whl.metadata (8.8 kB)
01:46:59 Collecting frozenlist>=1.1.1 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
01:46:59   Using cached frozenlist-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl.metadata (20 kB)
01:46:59 Collecting propcache>=0.2.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
01:46:59   Using cached propcache-0.5.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (16 kB)
01:46:59 Collecting yarl<2.0,>=1.17.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
01:47:00   Using cached yarl-1.24.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (103 kB)
01:47:00 Requirement already satisfied: urllib3!=2.2.0,<3,>=1.25.4 in ./.venv3/lib64/python3.11/site-packages (from botocore<1.43.57,>=1.43.3->aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr) (2.7.0)
01:47:00 Requirement already satisfied: six>=1.5 in ./.venv3/lib64/python3.11/site-packages (from python-dateutil<3.0.0,>=2.1->aiobotocore<4.0.0,>=2.19.0->s3fs>=2026.6.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr) (1.17.0)
01:47:00 Requirement already satisfied: idna>=2.0 in ./.venv3/lib64/python3.11/site-packages (from yarl<2.0,>=1.17.0->aiohttp->ome-zarr>=0.13.0->omero-cli-zarr) (3.18)
01:47:00 Collecting scipy>=1.11.4 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
01:47:00   Using cached scipy-1.17.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (62 kB)
01:47:00 Collecting networkx>=3.0 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
01:47:00   Using cached networkx-3.6.1-py3-none-any.whl.metadata (6.8 kB)
01:47:00 Collecting imageio!=2.35.0,>=2.33 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
01:47:00   Using cached imageio-2.37.4-py3-none-any.whl.metadata (9.6 kB)
01:47:00 Collecting tifffile>=2022.8.12 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
01:47:00   Using cached tifffile-2026.3.3-py3-none-any.whl.metadata (31 kB)
01:47:00 Collecting lazy-loader>=0.4 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
01:47:00   Using cached lazy_loader-0.5-py3-none-any.whl.metadata (5.9 kB)
01:47:00 Collecting donfig>=0.8 (from zarr>=3.0.0->ome-zarr>=0.13.0->omero-cli-zarr)
01:47:00   Using cached donfig-0.8.1.post1-py3-none-any.whl.metadata (5.0 kB)
01:47:00 Collecting google-crc32c>=1.5 (from zarr>=3.0.0->ome-zarr>=0.13.0->omero-cli-zarr)
01:47:00   Using cached google_crc32c-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_5_x86_64.whl.metadata (1.7 kB)
01:47:01 Collecting numcodecs>=0.14 (from zarr>=3.0.0->ome-zarr>=0.13.0->omero-cli-zarr)
01:47:01   Using cached numcodecs-0.16.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (3.4 kB)
01:47:01 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->ome-zarr>=0.13.0->omero-cli-zarr) (3.4.9)
01:47:01 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->ome-zarr>=0.13.0->omero-cli-zarr) (2026.7.22)
01:47:01 Using cached ome_zarr-0.18.0-py3-none-any.whl (57 kB)
01:47:01 Using cached dask-2026.7.1-py3-none-any.whl (1.5 MB)
01:47:01 Using cached click-8.4.2-py3-none-any.whl (119 kB)
01:47:01 Using cached cloudpickle-3.1.2-py3-none-any.whl (22 kB)
01:47:01 Using cached fsspec-2026.7.0-py3-none-any.whl (206 kB)
01:47:01 Using cached importlib_metadata-9.0.0-py3-none-any.whl (27 kB)
01:47:01 Using cached ome_zarr_models-1.7-py3-none-any.whl (64 kB)
01:47:01 Using cached pydantic-2.12.5-py3-none-any.whl (463 kB)
01:47:01 Using cached pydantic_core-2.41.5-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (2.1 MB)
01:47:01 Using cached partd-1.4.2-py3-none-any.whl (18 kB)
01:47:01 Using cached pydantic_zarr-0.9.2-py3-none-any.whl (52 kB)
01:47:01 Using cached s3fs-2026.7.0-py3-none-any.whl (32 kB)
01:47:01 Using cached aiobotocore-3.9.0-py3-none-any.whl (100 kB)
01:47:01 Using cached aiohttp-3.14.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (1.8 MB)
01:47:01 Using cached aioitertools-0.13.0-py3-none-any.whl (24 kB)
01:47:01 Using cached botocore-1.43.56-py3-none-any.whl (15.4 MB)
01:47:01 Using cached jmespath-1.1.0-py3-none-any.whl (20 kB)
01:47:01 Using cached multidict-6.7.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (246 kB)
01:47:01 Using cached wrapt-2.3.0-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl (161 kB)
01:47:01 Using cached yarl-1.24.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (111 kB)
01:47:01 Using cached aiohappyeyeballs-2.7.1-py3-none-any.whl (15 kB)
01:47:01 Using cached aiosignal-1.4.0-py3-none-any.whl (7.5 kB)
01:47:01 Using cached attrs-26.1.0-py3-none-any.whl (67 kB)
01:47:01 Using cached frozenlist-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl (231 kB)
01:47:01 Using cached propcache-0.5.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (58 kB)
01:47:01 Using cached scikit_image-0.26.0-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (13.7 MB)
01:47:01 Using cached imageio-2.37.4-py3-none-any.whl (318 kB)
01:47:01 Using cached lazy_loader-0.5-py3-none-any.whl (8.0 kB)
01:47:01 Using cached networkx-3.6.1-py3-none-any.whl (2.1 MB)
01:47:01 Using cached scipy-1.17.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (35.3 MB)
01:47:01 Using cached tifffile-2026.3.3-py3-none-any.whl (243 kB)
01:47:01 Using cached toolz-1.1.0-py3-none-any.whl (58 kB)
01:47:01 Using cached zarr-3.1.6-py3-none-any.whl (295 kB)
01:47:01 Using cached donfig-0.8.1.post1-py3-none-any.whl (21 kB)
01:47:01 Using cached google_crc32c-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_5_x86_64.whl (33 kB)
01:47:01 Using cached numcodecs-0.16.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (9.1 MB)
01:47:01 Using cached zipp-4.1.0-py3-none-any.whl (10 kB)
01:47:02 Using cached deprecated-1.3.1-py2.py3-none-any.whl (11 kB)
01:47:02 Using cached locket-1.0.0-py2.py3-none-any.whl (4.4 kB)
01:47:02 Using cached rangehttpserver-1.4.0-py2.py3-none-any.whl (7.8 kB)
01:47:02 Building wheels for collected packages: omero-cli-zarr
01:47:02   Building wheel for omero-cli-zarr (pyproject.toml): started
01:47:02   Building wheel for omero-cli-zarr (pyproject.toml): finished with status 'done'
01:47:02   Created wheel for omero-cli-zarr: filename=omero_cli_zarr-0.5.5.dev168+g3f6bf2f-py3-none-any.whl size=38399 sha256=faa3f3223c995ae74e0c0fb7bd50c6620b8fd53d0dd270646793528b97212471
01:47:02   Stored in directory: /tmp/pip-ephem-wheel-cache-3b64589r/wheels/23/9b/a6/58188c5a16d0876457bd9f2c6a2fb9759c671db67032a0e529
01:47:02 Successfully built omero-cli-zarr
01:47:02 Installing collected packages: rangehttpserver, zipp, wrapt, toolz, tifffile, scipy, pydantic-core, propcache, numcodecs, networkx, multidict, locket, lazy-loader, jmespath, imageio, google-crc32c, fsspec, frozenlist, donfig, cloudpickle, click, attrs, aioitertools, aiohappyeyeballs, zarr, yarl, scikit-image, pydantic, partd, importlib_metadata, Deprecated, botocore, aiosignal, pydantic-zarr, dask, aiohttp, ome-zarr-models, aiobotocore, s3fs, ome-zarr, omero-cli-zarr
01:47:39   Attempting uninstall: pydantic-core
01:47:39     Found existing installation: pydantic_core 2.46.4
01:47:39     Uninstalling pydantic_core-2.46.4:
01:47:39       Successfully uninstalled pydantic_core-2.46.4
01:48:14   Attempting uninstall: pydantic
01:48:14     Found existing installation: pydantic 2.13.4
01:48:15     Uninstalling pydantic-2.13.4:
01:48:15       Successfully uninstalled pydantic-2.13.4
01:48:56 
01:48:56 Successfully installed Deprecated-1.3.1 aiobotocore-3.9.0 aiohappyeyeballs-2.7.1 aiohttp-3.14.3 aioitertools-0.13.0 aiosignal-1.4.0 attrs-26.1.0 botocore-1.43.56 click-8.4.2 cloudpickle-3.1.2 dask-2026.7.1 donfig-0.8.1.post1 frozenlist-1.8.0 fsspec-2026.7.0 google-crc32c-1.8.0 imageio-2.37.4 importlib_metadata-9.0.0 jmespath-1.1.0 lazy-loader-0.5 locket-1.0.0 multidict-6.7.1 networkx-3.6.1 numcodecs-0.16.5 ome-zarr-0.18.0 ome-zarr-models-1.7 omero-cli-zarr-0.5.5.dev168+g3f6bf2f partd-1.4.2 propcache-0.5.2 pydantic-2.12.5 pydantic-core-2.41.5 pydantic-zarr-0.9.2 rangehttpserver-1.4.0 s3fs-2026.7.0 scikit-image-0.26.0 scipy-1.17.1 tifffile-2026.3.3 toolz-1.1.0 wrapt-2.3.0 yarl-1.24.5 zarr-3.1.6 zipp-4.1.0
01:48:56 + pip install omero-certificates
01:48:57 Collecting omero-certificates
01:48:57   Using cached omero_certificates-0.4.0-py3-none-any.whl.metadata (3.3 kB)
01:48:57 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-certificates) (5.23.0)
01:48:57 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (1.4.4)
01:48:57 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (1.0.0)
01:48:57 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (2.4.6)
01:48:57 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (12.3.0)
01:48:57 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (6.0.3)
01:48:57 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (3.6.5)
01:48:57 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (2.34.2)
01:48:57 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (4.1.0)
01:48:57 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.4.9)
01:48:57 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.18)
01:48:57 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2.7.0)
01:48:57 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2026.7.22)
01:48:57 Using cached omero_certificates-0.4.0-py3-none-any.whl (11 kB)
01:48:58 Installing collected packages: omero-certificates
01:48:58 Successfully installed omero-certificates-0.4.0
01:48:58 + for x in *.tar.gz
01:48:58 + pip install -U omero_dropbox-5.7.1.dev0.tar.gz
01:48:59 Processing ./omero_dropbox-5.7.1.dev0.tar.gz
01:48:59   Installing build dependencies: started
01:49:00   Installing build dependencies: finished with status 'done'
01:49:00   Getting requirements to build wheel: started
01:49:00   Getting requirements to build wheel: finished with status 'done'
01:49:00   Preparing metadata (pyproject.toml): started
01:49:01   Preparing metadata (pyproject.toml): finished with status 'done'
01:49:01 Requirement already satisfied: omero-py in ./.venv3/lib64/python3.11/site-packages (from omero-dropbox==5.7.1.dev0) (5.23.0)
01:49:01 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.4.4)
01:49:01 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.0.0)
01:49:01 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.4.6)
01:49:01 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (12.3.0)
01:49:01 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (6.0.3)
01:49:01 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5)
01:49:01 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.34.2)
01:49:01 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (4.1.0)
01:49:01 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.4.9)
01:49:01 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.18)
01:49:01 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2.7.0)
01:49:01 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2026.7.22)
01:49:01 Building wheels for collected packages: omero-dropbox
01:49:01   Building wheel for omero-dropbox (pyproject.toml): started
01:49:01   Building wheel for omero-dropbox (pyproject.toml): finished with status 'done'
01:49:01   Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49153 sha256=cd77ac7b0d8be5a1811bfa55f68b39f1258e2c26139ecbe236253abc66dc841e
01:49:01   Stored in directory: /home/omero/.cache/pip/wheels/97/54/5f/8dccf5c24b891c9bef25978dac72ee622eda35946855e06c92
01:49:01 Successfully built omero-dropbox
01:49:01 Installing collected packages: omero-dropbox
01:49:02 Successfully installed omero-dropbox-5.7.1.dev0
01:49:02 + for x in *.tar.gz
01:49:02 + pip install -U omero_marshal-0.9.2.dev0.tar.gz
01:49:03 Processing ./omero_marshal-0.9.2.dev0.tar.gz
01:49:03   Installing build dependencies: started
01:49:04   Installing build dependencies: finished with status 'done'
01:49:04   Getting requirements to build wheel: started
01:49:04   Getting requirements to build wheel: finished with status 'done'
01:49:04   Preparing metadata (pyproject.toml): started
01:49:05   Preparing metadata (pyproject.toml): finished with status 'done'
01:49:05 Building wheels for collected packages: omero_marshal
01:49:05   Building wheel for omero_marshal (pyproject.toml): started
01:49:05   Building wheel for omero_marshal (pyproject.toml): finished with status 'done'
01:49:05   Created wheel for omero_marshal: filename=omero_marshal-0.9.2.dev0-py3-none-any.whl size=88129 sha256=5415ceb675de9322f3ae2037fc26a858b86244ac892465fe8e397b890ffad41c
01:49:05   Stored in directory: /home/omero/.cache/pip/wheels/38/19/f8/b7cbc5aa44dc10bd3c24777f40a22cf6ed1baeac622bbf8230
01:49:05 Successfully built omero_marshal
01:49:05 Installing collected packages: omero_marshal
01:49:08 Successfully installed omero_marshal-0.9.2.dev0
01:49:08 + for x in *.tar.gz
01:49:08 + pip install -U omero_py-5.23.1.dev0.tar.gz
01:49:09 Processing ./omero_py-5.23.1.dev0.tar.gz
01:49:09   Installing build dependencies: started
01:49:10   Installing build dependencies: finished with status 'done'
01:49:10   Getting requirements to build wheel: started
01:49:11   Getting requirements to build wheel: finished with status 'done'
01:49:11   Preparing metadata (pyproject.toml): started
01:49:11   Preparing metadata (pyproject.toml): finished with status 'done'
01:49:11 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (1.4.4)
01:49:11 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (1.0.0)
01:49:11 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (2.4.6)
01:49:11 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (12.3.0)
01:49:11 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (6.0.3)
01:49:11 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (3.6.5)
01:49:11 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (2.34.2)
01:49:11 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.23.1.dev0) (4.1.0)
01:49:11 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.23.1.dev0) (3.4.9)
01:49:11 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.23.1.dev0) (3.18)
01:49:11 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.23.1.dev0) (2.7.0)
01:49:11 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.23.1.dev0) (2026.7.22)
01:49:11 Building wheels for collected packages: omero-py
01:49:11   Building wheel for omero-py (pyproject.toml): started
01:49:12   Building wheel for omero-py (pyproject.toml): finished with status 'done'
01:49:12   Created wheel for omero-py: filename=omero_py-5.23.1.dev0-py3-none-any.whl size=2786710 sha256=a9bbe2076a88b040d55303244d549fdefb584af56a6d9f38ca6427d48b9449fe
01:49:12   Stored in directory: /home/omero/.cache/pip/wheels/99/0a/38/75d301c3c2feff37b61c572a590c9d07ab2e52df205857b74d
01:49:12 Successfully built omero-py
01:49:13 Installing collected packages: omero-py
01:49:13   Attempting uninstall: omero-py
01:49:13     Found existing installation: omero-py 5.23.0
01:49:13     Uninstalling omero-py-5.23.0:
01:49:24       Successfully uninstalled omero-py-5.23.0
01:49:40 Successfully installed omero-py-5.23.1.dev0
01:49:40 + for x in *.tar.gz
01:49:40 + pip install -U omero_scripts-5.10.1.dev0.tar.gz
01:49:41 Processing ./omero_scripts-5.10.1.dev0.tar.gz
01:49:41   Installing build dependencies: started
01:49:43   Installing build dependencies: finished with status 'done'
01:49:43   Getting requirements to build wheel: started
01:49:43   Getting requirements to build wheel: finished with status 'done'
01:49:43   Preparing metadata (pyproject.toml): started
01:49:43   Preparing metadata (pyproject.toml): finished with status 'done'
01:49:43 Building wheels for collected packages: omero-scripts
01:49:43   Building wheel for omero-scripts (pyproject.toml): started
01:49:44   Building wheel for omero-scripts (pyproject.toml): finished with status 'done'
01:49:44   Created wheel for omero-scripts: filename=omero_scripts-5.10.1.dev0-py3-none-any.whl size=137216 sha256=c7af7a3a6fef7f7daf1a7c1d3f2e4baa8e0b91583a2e5ac9b7c2d0eb290e7beb
01:49:44   Stored in directory: /home/omero/.cache/pip/wheels/42/27/9e/76575465f2b255db596bcfcfc1a50c113f5603b7dc93ec491e
01:49:44 Successfully built omero-scripts
01:49:44 Installing collected packages: omero-scripts
01:49:45 Successfully installed omero-scripts-5.10.1.dev0
01:49:45 + for x in *.tar.gz
01:49:45 + pip install -U omero_web-5.32.1.dev0.tar.gz
01:49:46 Processing ./omero_web-5.32.1.dev0.tar.gz
01:49:46   Installing build dependencies: started
01:49:47   Installing build dependencies: finished with status 'done'
01:49:47   Getting requirements to build wheel: started
01:49:48   Getting requirements to build wheel: finished with status 'done'
01:49:48   Preparing metadata (pyproject.toml): started
01:49:48   Preparing metadata (pyproject.toml): finished with status 'done'
01:49:48 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (5.23.1.dev0)
01:49:48 Collecting concurrent-log-handler>=0.9.20 (from omero-web==5.32.1.dev0)
01:49:48   Using cached concurrent_log_handler-0.9.29-py3-none-any.whl.metadata (27 kB)
01:49:48 Collecting Django<5.3,>=5.2.9 (from omero-web==5.32.1.dev0)
01:49:48   Using cached django-5.2.17-py3-none-any.whl.metadata (4.1 kB)
01:49:49 Collecting django-pipeline>=4.1.0 (from omero-web==5.32.1.dev0)
01:49:49   Using cached django_pipeline-4.1.0-py3-none-any.whl.metadata (5.9 kB)
01:49:49 Collecting django-cors-headers==3.7.0 (from omero-web==5.32.1.dev0)
01:49:49   Using cached django_cors_headers-3.7.0-py3-none-any.whl.metadata (15 kB)
01:49:49 Collecting whitenoise>=5.3.0 (from omero-web==5.32.1.dev0)
01:49:49   Using cached whitenoise-6.12.0-py3-none-any.whl.metadata (3.7 kB)
01:49:49 Collecting gunicorn>=19.3 (from omero-web==5.32.1.dev0)
01:49:49   Using cached gunicorn-26.0.0-py3-none-any.whl.metadata (5.4 kB)
01:49:49 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (0.9.2.dev0)
01:49:49 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (12.3.0)
01:49:49 Requirement already satisfied: pytz in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (2026.3.post1)
01:49:49 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (4.1.0)
01:49:49 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (26.3)
01:49:49 Collecting importlib-resources (from omero-web==5.32.1.dev0)
01:49:49   Using cached importlib_resources-7.1.0-py3-none-any.whl.metadata (4.0 kB)
01:49:49 Collecting asgiref>=3.8.1 (from Django<5.3,>=5.2.9->omero-web==5.32.1.dev0)
01:49:49   Using cached asgiref-3.12.1-py3-none-any.whl.metadata (9.4 kB)
01:49:49 Collecting sqlparse>=0.3.1 (from Django<5.3,>=5.2.9->omero-web==5.32.1.dev0)
01:49:49   Using cached sqlparse-0.5.5-py3-none-any.whl.metadata (4.7 kB)
01:49:49 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web==5.32.1.dev0) (65.5.1)
01:49:49 Collecting wheel (from django-pipeline>=4.1.0->omero-web==5.32.1.dev0)
01:49:49   Using cached wheel-0.47.0-py3-none-any.whl.metadata (2.3 kB)
01:49:49 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (1.4.4)
01:49:49 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (1.0.0)
01:49:49 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (2.4.6)
01:49:49 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (6.0.3)
01:49:49 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (3.6.5)
01:49:49 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (2.34.2)
01:49:49 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.32.1.dev0) (3.4.9)
01:49:49 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.32.1.dev0) (3.18)
01:49:49 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.32.1.dev0) (2.7.0)
01:49:49 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.32.1.dev0) (2026.7.22)
01:49:49 Using cached django_cors_headers-3.7.0-py3-none-any.whl (12 kB)
01:49:50 Using cached django-5.2.17-py3-none-any.whl (8.3 MB)
01:49:50 Using cached asgiref-3.12.1-py3-none-any.whl (25 kB)
01:49:50 Using cached concurrent_log_handler-0.9.29-py3-none-any.whl (32 kB)
01:49:50 Using cached django_pipeline-4.1.0-py3-none-any.whl (75 kB)
01:49:50 Using cached gunicorn-26.0.0-py3-none-any.whl (212 kB)
01:49:50 Using cached sqlparse-0.5.5-py3-none-any.whl (46 kB)
01:49:50 Using cached whitenoise-6.12.0-py3-none-any.whl (20 kB)
01:49:50 Using cached importlib_resources-7.1.0-py3-none-any.whl (37 kB)
01:49:50 Using cached wheel-0.47.0-py3-none-any.whl (32 kB)
01:49:50 Building wheels for collected packages: omero-web
01:49:50   Building wheel for omero-web (pyproject.toml): started
01:49:51   Building wheel for omero-web (pyproject.toml): finished with status 'done'
01:49:51   Created wheel for omero-web: filename=omero_web-5.32.1.dev0-py3-none-any.whl size=2820229 sha256=f1333eebe09ef0474ca528204518a8f027d88b071493e140a33b0406ef13c9fd
01:49:51   Stored in directory: /home/omero/.cache/pip/wheels/e6/f6/6f/ec36dda9edad720aabd7330edafa8a6a62d6ebfa4c7467248f
01:49:51 Successfully built omero-web
01:49:51 Installing collected packages: whitenoise, wheel, sqlparse, importlib-resources, gunicorn, concurrent-log-handler, asgiref, django-pipeline, Django, django-cors-headers, omero-web
01:50:59 
01:50:59 Successfully installed Django-5.2.17 asgiref-3.12.1 concurrent-log-handler-0.9.29 django-cors-headers-3.7.0 django-pipeline-4.1.0 gunicorn-26.0.0 importlib-resources-7.1.0 omero-web-5.32.1.dev0 sqlparse-0.5.5 wheel-0.47.0 whitenoise-6.12.0
01:50:59 + wget https://raw.githubusercontent.com/snoopycrimecop/omero-figure/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
01:50:59 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
01:50:59 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
01:50:59 --2026-08-06 01:50:59--  https://raw.githubusercontent.com/snoopycrimecop/omero-figure/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
01:50:59 Resolving raw.githubusercontent.com (raw.githubusercontent.com)... 185.199.111.133, 185.199.108.133, 185.199.109.133, ...
01:50:59 Connecting to raw.githubusercontent.com (raw.githubusercontent.com)|185.199.111.133|:443... connected.
01:50:59 HTTP request sent, awaiting response... 200 OK
01:51:00 Length: 139337 (136K) [text/plain]
01:51:00 Saving to: ‘Figure_To_Pdf.py’
01:51:00 
01:51:00      0K .......... .......... .......... .......... .......... 36% 2.91M 0s
01:51:00     50K .......... .......... .......... .......... .......... 73% 5.95M 0s
01:51:00    100K .......... .......... .......... ......               100% 4.81M=0.03s
01:51:00 
01:51:00 2026-08-06 01:51:00 (4.11 MB/s) - ‘Figure_To_Pdf.py’ saved [139337/139337]
01:51:00 
01:51:00 + chmod 755 Figure_To_Pdf.py
01:51:00 + mv Figure_To_Pdf.py /home/omero/workspace/OMERO-server/OMERO.server/lib/scripts/omero/figure_scripts
01:51:00 + omero config set omero.db.name OMERO-server
01:51:07 + omero config set omero.db.host pg
01:51:12 + omero config set omero.db.user postgres
01:51:17 + omero config set omero.data.dir /home/omero/omero-server-data
01:51:21 + omero config set omero.fs.repo.path %user%_%userId%/%thread%//%year%-%month%/%day%/%time%
01:51:27 + omero config set omero.db.poolsize 25
01:51:32 + omero config set omero.security.trustStore /etc/pki/ca-trust/extracted/java/cacerts
01:51:37 + omero config set omero.security.trustStorePassword changeit
01:51:42 + omero config set omero.mail.config true
01:51:47 + omero config set omero.server.nodedescriptors master:Blitz-0,Indexer-0,Processor-0,Storm,Tables-0
01:51:52 + omero config set omero.jvmcfg.append '--add-opens java.base/java.lang=ALL-UNNAMED --add-exports java.naming/com.sun.jndi.ldap=ALL-UNNAMED'
01:51:56 + omero certificates
01:52:01 OpenSSL 3.5.5 27 Jan 2026 (Library: OpenSSL 3.5.5 27 Jan 2026)
01:52:01 certificates created: /home/omero/omero-server-data/certs/server.pem /home/omero/omero-server-data/certs/server.p12
01:52:01 + '[' false = true ']'
01:52:01 + echo 'Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade'
01:52:01 Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade
01:52:01 + omego db -vvv upgrade --serverdir /home/omero/workspace/OMERO-server/OMERO.server --dbname OMERO-server
01:52:02 2026-08-06 01:52:02,177 [    omego.db] DEBUG            dbcommand => upgrade
01:52:02 2026-08-06 01:52:02,178 [    omego.db] DEBUG               dbhost => localhost
01:52:02 2026-08-06 01:52:02,178 [    omego.db] DEBUG               dbname => OMERO-server
01:52:02 2026-08-06 01:52:02,178 [    omego.db] DEBUG               dbpass => omero
01:52:02 2026-08-06 01:52:02,178 [    omego.db] DEBUG               dbuser => omero
01:52:02 2026-08-06 01:52:02,178 [    omego.db] DEBUG             rootpass => omero
01:52:02 2026-08-06 01:52:02,178 [    omego.db] DEBUG            serverdir => /home/omero/workspace/OMERO-server/OMERO.server
01:52:02 2026-08-06 01:52:02,179 [omego.extern] INFO  Executing : omero version
01:52:06 OMERO.py version:
01:52:06 OMERO.server version:
01:52:06 5.6.3-637-651be86f17-ice36-b37
01:52:06 5.23.1.dev0
01:52:07 2026-08-06 01:52:07,324 [omego.extern] INFO  Completed [5.145 s]
01:52:07 2026-08-06 01:52:07,324 [omego.extern] DEBUG Using omero CLI from omero
01:52:07 2026-08-06 01:52:07,324 [    omego.db] INFO  DbAdmin: DbAdmin /home/omero/workspace/OMERO-server/OMERO.server ...
01:52:07 2026-08-06 01:52:07,324 [omego.extern] INFO  Running [current environment]: omero config get --show-password
01:52:07 2026-08-06 01:52:07,324 [omego.extern] INFO  Executing : omero config get --show-password
01:52:12 2026-08-06 01:52:12,230 [omego.extern] INFO  Completed [4.905 s]
01:52:12 2026-08-06 01:52:12,230 [    omego.db] INFO  Failed to lookup parameter omero.db.pass, using omero
01:52:12 2026-08-06 01:52:12,230 [omego.extern] INFO  Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t --version
01:52:12 2026-08-06 01:52:12,236 [omego.extern] INFO  Completed [0.006 s]
01:52:12 2026-08-06 01:52:12,236 [    omego.db] DEBUG stdout: b'psql (PostgreSQL) 16.14\n'
01:52:12 2026-08-06 01:52:12,237 [    omego.db] INFO  psql version: psql (PostgreSQL) 16.14
01:52:12 
01:52:12 2026-08-06 01:52:12,237 [omego.extern] INFO  Running [current environment]: omero config get --show-password
01:52:12 2026-08-06 01:52:12,237 [omego.extern] INFO  Executing : omero config get --show-password
01:52:17 2026-08-06 01:52:17,127 [omego.extern] INFO  Completed [4.890 s]
01:52:17 2026-08-06 01:52:17,127 [    omego.db] INFO  Failed to lookup parameter omero.db.pass, using omero
01:52:17 2026-08-06 01:52:17,127 [omego.extern] INFO  Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c \conninfo
01:52:17 2026-08-06 01:52:17,143 [omego.extern] INFO  Completed [0.016 s]
01:52:17 2026-08-06 01:52:17,143 [    omego.db] DEBUG stdout: b'You are connected to database "OMERO-server" as user "postgres" on host "pg" (address "172.18.0.5") at port "5432".\n'
01:52:17 2026-08-06 01:52:17,143 [    omego.db] DEBUG Executing query: SELECT currentversion, currentpatch FROM dbpatch ORDER BY id DESC LIMIT 1
01:52:17 2026-08-06 01:52:17,143 [omego.extern] INFO  Running [current environment]: omero config get --show-password
01:52:17 2026-08-06 01:52:17,143 [omego.extern] INFO  Executing : omero config get --show-password
01:52:22 2026-08-06 01:52:22,469 [omego.extern] INFO  Completed [5.326 s]
01:52:22 2026-08-06 01:52:22,469 [    omego.db] INFO  Failed to lookup parameter omero.db.pass, using omero
01:52:22 2026-08-06 01:52:22,469 [omego.extern] INFO  Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c SELECT currentversion, currentpatch FROM dbpatch ORDER BY id DESC LIMIT 1
01:52:22 2026-08-06 01:52:22,498 [omego.extern] INFO  Completed [0.028 s]
01:52:22 2026-08-06 01:52:22,498 [    omego.db] DEBUG stdout: b'OMERO5.4|0\n'
01:52:22 2026-08-06 01:52:22,498 [    omego.db] INFO  Current omero db version: ('OMERO5.4', '0')
01:52:22 2026-08-06 01:52:22,543 [    omego.db] INFO  Database is already at OMERO5.4__0
01:52:22 + export LANG=en_US.UTF-8
01:52:22 + LANG=en_US.UTF-8
01:52:22 + export LANGUAGE=en_US:en
01:52:22 + LANGUAGE=en_US:en
01:52:22 + export LC_ALL=en_US.UTF-8
01:52:22 + LC_ALL=en_US.UTF-8
01:52:22 + BUILD_ID=DONT_KILL_ME
01:52:22 + omero admin start
01:52:33 No descriptor given. Using etc/grid/default.xml
01:52:42 Creating /home/omero/workspace/OMERO-server/OMERO.server/var/master
01:52:42 Initializing /home/omero/workspace/OMERO-server/OMERO.server/var/log
01:52:42 Creating /home/omero/workspace/OMERO-server/OMERO.server/var/registry
01:52:42 Waiting on startup. Use CTRL-C to exit
01:52:42 + omero admin waitup
01:52:47 Waiting on startup. Use CTRL-C to exit
01:52:48 + omero admin diagnostics
01:52:53 
01:52:53 ================================================================================
01:52:53 OMERO Diagnostics (admin)
01:52:53 ================================================================================
01:52:53         
01:52:53 Commands:   java -version                  21.0.12   (/usr/bin/java)
01:52:53 Commands:   python -V                      3.11.13   (/home/omero/workspace/OMERO-server/.venv3/bin/python)
01:52:53 Commands:   icegridnode --version          3.6.5     (/opt/ice-3.6.5/bin/icegridnode)
01:52:53 Commands:   icegridadmin --version         3.6.5     (/opt/ice-3.6.5/bin/icegridadmin)
01:52:53 Commands:   psql --version                 16.14     (/usr/bin/psql)
01:52:53 Commands:   openssl version                3.5.527   (/usr/bin/openssl)
01:52:53 
01:52:53 Component:  OMERO.py                       5.23.1.dev0
01:52:53 Component:  OMERO.server                   5.6.3-637-651be86f17-ice36-b37
01:52:53 
01:52:53 Server:     icegridnode                    running
01:52:53 Server:     Blitz-0                        active (pid = 17908, enabled)
01:52:53 Server:     Indexer-0                      active (pid = 17932, enabled)
01:52:53 Server:     OMERO.Glacier2                 active (pid = 17952, enabled)
01:52:53 Server:     OMERO.IceStorm                 active (pid = 17965, enabled)
01:52:53 Server:     Processor-0                    active (pid = 17956, enabled)
01:52:53 Server:     Tables-0                       active (pid = 17936, enabled)
01:52:53 
01:52:53 Log dir:    /home/omero/workspace/OMERO-server/OMERO.server/var/log exists
01:52:53 Log files:  Blitz-0.log                    32.1 KB       errors=0    warnings=1   
01:52:53 Log files:  DropBox.log                    n/a
01:52:53 Log files:  FileServer.log                 n/a
01:52:53 Log files:  Indexer-0.log                  2.6 KB       
01:52:53 Log files:  MonitorServer.log              n/a
01:52:53 Log files:  Processor-0.log                735 B        
01:52:53 Log files:  Tables-0.log                   961 B        
01:52:53 Log files:  TestDropBox.log                n/a
01:52:53 Log files:  master.err                     empty
01:52:53 Log files:  master.out                     30.5 KB      
01:52:53 Log files:  Total size                     0.07 MB
01:52:53 
01:52:53 
01:52:53 Environment:OMERO_HOME=(unset)             
01:52:53 Environment:OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server 
01:52:53 Environment:OMERO_NODE=(unset)             
01:52:53 Environment:OMERO_MASTER=(unset)           
01:52:53 Environment:OMERO_USERDIR=(unset)          
01:52:53 Environment:OMERO_TMPDIR=(unset)           
01:52:53 Environment:PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 
01:52:53 Environment:PYTHONPATH=(unset)             
01:52:53 Environment:ICE_HOME=/opt/ice-3.6.5        
01:52:53 Environment:LD_LIBRARY_PATH=(unset)        
01:52:53 Environment:DYLD_LIBRARY_PATH=(unset)      
01:52:53 
01:52:53 OMERO SSL port:4064                           
01:52:53 OMERO TCP port:4063                           
01:52:53 OMERO data dir:'/home/omero/omero-server-data' Exists? True	Is writable? True
01:52:54 OMERO temp dir:'/home/omero/omero/tmp'        Exists? True	Is writable? True   (Size: 0)
01:52:54 
01:52:54 JVM settings: Blitz-${index}                -Xmx7200m
01:52:54 JVM settings: Indexer-${index}              -Xmx4800m
01:52:54 JVM settings: PixelData-${index}            -Xmx7200m
01:52:54 JVM settings: Repository-${index}           -Xmx4800m
01:52:54 
01:52:54 Jar:        lib/server/formats-api.jar     Bio-Formats API	8.5.0	18 March 2026	877c317e4e396381dc76e56c1539b24947f71dce
01:52:54 Jar:        lib/server/formats-bsd.jar     BSD Bio-Formats readers and writers	8.5.0	18 March 2026	877c317e4e396381dc76e56c1539b24947f71dce
01:52:54 Jar:        lib/server/formats-gpl.jar     Bio-Formats library	8.5.0	18 March 2026	877c317e4e396381dc76e56c1539b24947f71dce
01:52:54 Jar:        lib/server/ome-codecs.jar      OME Codecs	1.1.3	26 February 2026	70fd9b72a9834f1af4852c1e5b5676c57a2c360e
01:52:54 Jar:        lib/server/ome-common.jar      OME Common Java	6.2.1	27 February 2026	a24fbcbf04a3a3acba14e9575d7fb1d36a484dff
01:52:54 Jar:        lib/server/ome-jai.jar         OME JAI	0.1.5	30 June 2025	257a1c1410c0103485248d05752a5174262a38b6
01:52:54 Jar:        lib/server/ome-mdbtools.jar    MDB Tools (Java port)	5.3.4	25 June 2025	57553b46e5f0cf9aefe5d97d2b1c8dd2073a4d37
01:52:54 Jar:        lib/server/ome-poi.jar         OME POI	5.3.11	11 November 2025	a2f3944ac71db9e7e51a6f64ec46beeb60613afb
01:52:54 Jar:        lib/server/ome-xml.jar         OME XML library	6.5.3	22 January 2026	21d1362abd9ce26e13888d2b2d028753d21ac96e
01:52:54 Jar:        lib/server/omero-blitz.jar     jar	5.8.6-SNAPSHOT		
01:52:54 Jar:        lib/server/omero-common.jar    jar	5.7.6-SNAPSHOT		
01:52:54 Jar:        lib/server/omero-gateway.jar   jar	5.11.1-SNAPSHOT		
01:52:54 Jar:        lib/server/omero-model.jar     jar	5.7.6-SNAPSHOT		
01:52:54 Jar:        lib/server/omero-renderer.jar  jar	5.6.6-SNAPSHOT		
01:52:54 Jar:        lib/server/omero-romio.jar     jar	5.8.6-SNAPSHOT		
01:52:54 Jar:        lib/server/omero-server.jar    jar	5.7.6-SNAPSHOT		
01:52:54 + deactivate
01:52:54 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
01:52:54 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:52:54 + export PATH
01:52:54 + unset _OLD_VIRTUAL_PATH
01:52:54 + '[' -n '' ']'
01:52:54 + hash -r
01:52:54 + '[' -n '' ']'
01:52:54 + unset VIRTUAL_ENV
01:52:54 + unset VIRTUAL_ENV_PROMPT
01:52:54 + '[' '!' '' = nondestructive ']'
01:52:54 + unset -f deactivate
01:52:54 Finished: SUCCESS