00:46:03 Started by upstream project "Trigger" build number 74
00:46:03 originally caused by:
00:46:03 Started by timer
00:46:03 Running as SYSTEM
00:46:03 Building remotely on omero (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-server
00:46:03 [OMERO-server] $ /bin/bash -xe /tmp/jenkins17675208341579961544.sh
00:46:03 + source /home/settings.env
00:46:03 ++ OMERO_DB_HOST=pg
00:46:03 ++ OMERO_DB_USER=postgres
00:46:03 ++ OMERO_DB_PASS=
00:46:03 ++ OMERO_ROOT_PASS=omero
00:46:03 ++ OMERO_DATA_DIR=/OMERO
00:46:03 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
00:46:03 + OMERO_DB_NAME=OMERO-server
00:46:03 + OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server
00:46:03 + export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
00:46:03 + OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
00:46:03 + OMERO_DATA_DIR=/home/omero/omero-server-data
00:46:03 + '[' -e /home/omero/workspace/OMERO-server/OMERO.server ']'
00:46:03 + source /home/omero/workspace/OMERO-server/.venv3/bin/activate
00:46:03 ++ deactivate nondestructive
00:46:03 ++ '[' -n '' ']'
00:46:03 ++ '[' -n '' ']'
00:46:03 ++ hash -r
00:46:03 ++ '[' -n '' ']'
00:46:03 ++ unset VIRTUAL_ENV
00:46:03 ++ unset VIRTUAL_ENV_PROMPT
00:46:03 ++ '[' '!' nondestructive = nondestructive ']'
00:46:03 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3
00:46:03 ++ export VIRTUAL_ENV
00:46:03 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:46:03 ++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:46:03 ++ export PATH
00:46:03 ++ '[' -n '' ']'
00:46:03 ++ '[' -z '' ']'
00:46:03 ++ _OLD_VIRTUAL_PS1=
00:46:03 ++ PS1='(.venv3) '
00:46:03 ++ export PS1
00:46:03 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
00:46:03 ++ export VIRTUAL_ENV_PROMPT
00:46:03 ++ hash -r
00:46:03 + omero admin stop
00:46:05 Waiting on shutdown. Use CTRL-C to exit
00:46:05 .+ sleep 5
00:46:20 + deactivate
00:46:20 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
00:46:20 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:46:20 + export PATH
00:46:20 + unset _OLD_VIRTUAL_PATH
00:46:20 + '[' -n '' ']'
00:46:20 + hash -r
00:46:20 + '[' -n '' ']'
00:46:20 + unset VIRTUAL_ENV
00:46:20 + unset VIRTUAL_ENV_PROMPT
00:46:20 + '[' '!' '' = nondestructive ']'
00:46:20 + unset -f deactivate
00:46:20 + rm -rf /home/omero/workspace/OMERO-server/.venv3
00:46:21 + python3.11 -m venv /home/omero/workspace/OMERO-server/.venv3
00:46:24 + '[' false = true ']'
00:46:24 + echo 'Skipping PURGE_DATA:CleanDbAndRepo'
00:46:24 Skipping PURGE_DATA:CleanDbAndRepo
00:46:24 + rm -rf /home/omero/workspace/OMERO-server/omero-blitz-5.8.5-SNAPSHOT-python.zip /home/omero/workspace/OMERO-server/omero_dropbox-5.7.1.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_marshal-0.9.2.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_py-5.22.1.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_scripts-5.10.1.dev0.tar.gz /home/omero/workspace/OMERO-server/OMERO.server /home/omero/workspace/OMERO-server/omero_web-5.30.2.dev0.tar.gz /home/omero/workspace/OMERO-server/version.properties
00:46:26 Copied 1 artifact from "OMERO-build" build number 51
00:46:26 Copied 5 artifacts from "OMERO-python-superbuild-build" build number 47
00:46:27 Copied 2 artifacts from "OMERO-build-build" build number 51
00:46:27 Copied 1 artifact from "OMERO-zarr-pixel-buffer-build" build number 45
00:46:27 [OMERO-server] $ /bin/bash -xe /tmp/jenkins17618721461065654185.sh
00:46:27 + source /home/settings.env
00:46:27 ++ OMERO_DB_HOST=pg
00:46:27 ++ OMERO_DB_USER=postgres
00:46:27 ++ OMERO_DB_PASS=
00:46:27 ++ OMERO_ROOT_PASS=omero
00:46:27 ++ OMERO_DATA_DIR=/OMERO
00:46:27 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
00:46:27 + OMERO_DB_NAME=OMERO-server
00:46:27 + OMERO_DATA_DIR=/home/omero/omero-server-data
00:46:27 + mkdir -p /home/omero/omero-server-data
00:46:27 + OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server
00:46:27 + export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
00:46:27 + OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
00:46:27 + export ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip
00:46:27 + ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip
00:46:27 + export VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties
00:46:27 + VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties
00:46:27 ++ ls OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51.zip
00:46:27 + ZIP=OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51.zip
00:46:27 + '[' '!' -z '' ']'
00:46:27 + DIST=OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51
00:46:27 + unzip OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51.zip
00:46:27 Archive: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51.zip
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/blitz/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/grid/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/profiles/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/templates/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/templates/error/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/templates/grid/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/scripts/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/scripts/luts/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/scripts/luts/janelia/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/scripts/luts/matplotlib/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/scripts/luts/ncsa_paledit/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/scripts/luts/seaborn/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/scripts/luts/wcif/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/scripts/omero/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/scripts/omero/analysis_scripts/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/scripts/omero/annotation_scripts/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/scripts/omero/export_scripts/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/scripts/omero/figure_scripts/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/scripts/omero/import_scripts/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/scripts/omero/util_scripts/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/server/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/share/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/share/licenses/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/misc/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO3A__1/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO3A__10/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO3A__11/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO3A__2/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO3A__3/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO3A__4/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO3A__5/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO3A__6/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO3A__7/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO3A__8/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO3A__9/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO3__4/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO3__5/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO3__6/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO3__7/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO4.1__0/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO4.2__0/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO4.2__0/t/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO4.3__0/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO4.4__0/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO4__0/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.0__0/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.1__1/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.2__0/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.3__0/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.4DEV__1/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.4DEV__2/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.4DEV__3/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.4__0/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/var/
00:46:27 creating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/var/tmp/
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/LICENSE.txt
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/backup.cfg
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/blitz/mail-senders.example
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/blitz/mail-server.example
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/build.properties
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/env.bat
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/env.sh
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/hibernate.properties
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/ice.config
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/logback-cli.xml
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/logback-indexing-cli.xml
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/logback-indexing.xml
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/logback.xml
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/mime.types
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/node1.cfg
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/node2.cfg
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/omero.properties
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/profiles/psql
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/rollover.cfg
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/templates/Windows.cfg
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/templates/error/maintainance.html
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/templates/grid/README
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/templates/grid/default.xml
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/templates/grid/templates.xml
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/templates/grid/windefault.xml
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/templates/ice.config
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/templates/internal.cfg
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/templates/master.cfg
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/templates/robot.template
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/etc/testdropbox.config
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/history.rst
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/OMEZarrReader.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/accessors-smart.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/activation.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/aggdesigner-algorithm.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/aircompressor.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/antlr.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/aopalliance.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/apiguardian-api.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/asm.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/avatica-core.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/avatica-metrics.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/aws-java-sdk-core.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/aws-java-sdk-kms.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/aws-java-sdk-s3.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/base.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/batik-anim.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/batik-awt-util.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/batik-bridge.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/batik-codec.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/batik-constants.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/batik-css.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/batik-dom.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/batik-ext.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/batik-gvt.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/batik-i18n.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/batik-parser.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/batik-script.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/batik-shared-resources.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/batik-svg-dom.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/batik-svggen.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/batik-transcoder.jar
00:46:27 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/lib/client/batik-util.jar
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00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO4.2__0/t/OMERO4.1__0.py
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO4.2__0/t/OMERO4.1__0.test
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO4.3__0/OMERO4.2__0.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO4.3__0/omero-4.2-data-fix.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO4.4__0/OMERO4.1__0.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO4.4__0/OMERO4.3__0.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO4__0/OMERO3A__11.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-fix.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-list.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.0__0/OMERO4.4__0.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.1__1/OMERO5.0__0.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.1__1/OMERO5.1__0.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.2__0/OMERO5.1__1.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.3__0/OMERO5.2__0.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.3__0/delete-ns-orphans.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.3__0/reverse_shape_color_argb_to_rgba.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.4__0/OMERO5.3__0.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.4__0/OMERO5.3__1.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.4__0/psql-footer.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.4__0/psql-header.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.4__0/schema.sql
00:46:29 inflating: OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51/sql/psql/OMERO5.4__0/views.sql
00:46:29 + rm -f OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51.zip
00:46:29 + mv /home/omero/workspace/OMERO-server/OMERO.server-5.6.3-593-9f51ea8b1b-ice36-b51 /home/omero/workspace/OMERO-server/OMERO.server
00:46:29 + rm -rf /home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-java-sdk-core.jar /home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-java-sdk-kms.jar /home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-java-sdk-s3.jar /home/omero/workspace/OMERO-server/OMERO.server/lib/server/jackson-annotations.jar /home/omero/workspace/OMERO-server/OMERO.server/lib/server/jackson-core.jar /home/omero/workspace/OMERO-server/OMERO.server/lib/server/jackson-databind.jar /home/omero/workspace/OMERO-server/OMERO.server/lib/server/logback-classic.jar /home/omero/workspace/OMERO-server/OMERO.server/lib/server/logback-core.jar
00:46:29 + awsSdkVersion=2.34.6
00:46:29 + jacksonVersion=2.20.0
00:46:29 + logbackVersion=1.3.14
00:46:29 + zarrJavaVersion=0.0.10
00:46:29 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/s3/2.34.6/s3-2.34.6.jar
00:46:29 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:46:29 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:46:29 --2026-02-12 00:46:29-- https://repo1.maven.org/maven2/software/amazon/awssdk/s3/2.34.6/s3-2.34.6.jar
00:46:29 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
00:46:29 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:46:29 HTTP request sent, awaiting response... 200 OK
00:46:29 Length: 4083366 (3.9M) [application/java-archive]
00:46:29 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/s3-2.34.6.jar’
00:46:29
00:46:29 0K .......... .......... .......... .......... .......... 1% 36.0M 0s
00:46:29 50K .......... .......... .......... .......... .......... 2% 3.54M 1s
00:46:29 100K .......... .......... .......... .......... .......... 3% 118M 0s
00:46:29 150K .......... .......... .......... .......... .......... 5% 3.73M 1s
00:46:29 200K .......... .......... .......... .......... .......... 6% 139M 0s
00:46:29 250K .......... .......... .......... .......... .......... 7% 329M 0s
00:46:29 300K .......... .......... .......... .......... .......... 8% 60.9M 0s
00:46:29 350K .......... .......... .......... .......... .......... 10% 60.3M 0s
00:46:29 400K .......... .......... .......... .......... .......... 11% 4.14M 0s
00:46:29 450K .......... .......... .......... .......... .......... 12% 300M 0s
00:46:29 500K .......... .......... .......... .......... .......... 13% 54.0M 0s
00:46:29 550K .......... .......... .......... .......... .......... 15% 59.9M 0s
00:46:29 600K .......... .......... .......... .......... .......... 16% 88.3M 0s
00:46:29 650K .......... .......... .......... .......... .......... 17% 4.30M 0s
00:46:29 700K .......... .......... .......... .......... .......... 18% 57.3M 0s
00:46:29 750K .......... .......... .......... .......... .......... 20% 284M 0s
00:46:29 800K .......... .......... .......... .......... .......... 21% 65.9M 0s
00:46:29 850K .......... .......... .......... .......... .......... 22% 70.2M 0s
00:46:29 900K .......... .......... .......... .......... .......... 23% 4.35M 0s
00:46:29 950K .......... .......... .......... .......... .......... 25% 55.3M 0s
00:46:29 1000K .......... .......... .......... .......... .......... 26% 253M 0s
00:46:29 1050K .......... .......... .......... .......... .......... 27% 66.5M 0s
00:46:29 1100K .......... .......... .......... .......... .......... 28% 80.5M 0s
00:46:29 1150K .......... .......... .......... .......... .......... 30% 4.33M 0s
00:46:29 1200K .......... .......... .......... .......... .......... 31% 52.7M 0s
00:46:29 1250K .......... .......... .......... .......... .......... 32% 278M 0s
00:46:29 1300K .......... .......... .......... .......... .......... 33% 65.2M 0s
00:46:29 1350K .......... .......... .......... .......... .......... 35% 96.1M 0s
00:46:29 1400K .......... .......... .......... .......... .......... 36% 4.36M 0s
00:46:29 1450K .......... .......... .......... .......... .......... 37% 21.3M 0s
00:46:29 1500K .......... .......... .......... .......... .......... 38% 25.3M 0s
00:46:29 1550K .......... .......... .......... .......... .......... 40% 12.9M 0s
00:46:29 1600K .......... .......... .......... .......... .......... 41% 17.7M 0s
00:46:29 1650K .......... .......... .......... .......... .......... 42% 17.0M 0s
00:46:29 1700K .......... .......... .......... .......... .......... 43% 21.3M 0s
00:46:29 1750K .......... .......... .......... .......... .......... 45% 25.0M 0s
00:46:29 1800K .......... .......... .......... .......... .......... 46% 17.0M 0s
00:46:29 1850K .......... .......... .......... .......... .......... 47% 17.7M 0s
00:46:29 1900K .......... .......... .......... .......... .......... 48% 17.4M 0s
00:46:29 1950K .......... .......... .......... .......... .......... 50% 15.2M 0s
00:46:29 2000K .......... .......... .......... .......... .......... 51% 23.5M 0s
00:46:29 2050K .......... .......... .......... .......... .......... 52% 13.5M 0s
00:46:29 2100K .......... .......... .......... .......... .......... 53% 17.6M 0s
00:46:29 2150K .......... .......... .......... .......... .......... 55% 25.9M 0s
00:46:29 2200K .......... .......... .......... .......... .......... 56% 19.0M 0s
00:46:29 2250K .......... .......... .......... .......... .......... 57% 17.8M 0s
00:46:29 2300K .......... .......... .......... .......... .......... 58% 17.1M 0s
00:46:29 2350K .......... .......... .......... .......... .......... 60% 14.1M 0s
00:46:29 2400K .......... .......... .......... .......... .......... 61% 25.4M 0s
00:46:29 2450K .......... .......... .......... .......... .......... 62% 18.8M 0s
00:46:29 2500K .......... .......... .......... .......... .......... 63% 15.6M 0s
00:46:29 2550K .......... .......... .......... .......... .......... 65% 17.3M 0s
00:46:29 2600K .......... .......... .......... .......... .......... 66% 26.1M 0s
00:46:29 2650K .......... .......... .......... .......... .......... 67% 15.2M 0s
00:46:29 2700K .......... .......... .......... .......... .......... 68% 19.7M 0s
00:46:29 2750K .......... .......... .......... .......... .......... 70% 14.9M 0s
00:46:29 2800K .......... .......... .......... .......... .......... 71% 14.6M 0s
00:46:30 2850K .......... .......... .......... .......... .......... 72% 37.5M 0s
00:46:30 2900K .......... .......... .......... .......... .......... 73% 15.5M 0s
00:46:30 2950K .......... .......... .......... .......... .......... 75% 19.4M 0s
00:46:30 3000K .......... .......... .......... .......... .......... 76% 15.5M 0s
00:46:30 3050K .......... .......... .......... .......... .......... 77% 14.3M 0s
00:46:30 3100K .......... .......... .......... .......... .......... 78% 32.8M 0s
00:46:30 3150K .......... .......... .......... .......... .......... 80% 16.4M 0s
00:46:30 3200K .......... .......... .......... .......... .......... 81% 18.5M 0s
00:46:30 3250K .......... .......... .......... .......... .......... 82% 13.9M 0s
00:46:30 3300K .......... .......... .......... .......... .......... 84% 14.3M 0s
00:46:30 3350K .......... .......... .......... .......... .......... 85% 25.9M 0s
00:46:30 3400K .......... .......... .......... .......... .......... 86% 22.5M 0s
00:46:30 3450K .......... .......... .......... .......... .......... 87% 18.5M 0s
00:46:30 3500K .......... .......... .......... .......... .......... 89% 14.1M 0s
00:46:30 3550K .......... .......... .......... .......... .......... 90% 11.3M 0s
00:46:30 3600K .......... .......... .......... .......... .......... 91% 32.5M 0s
00:46:30 3650K .......... .......... .......... .......... .......... 92% 22.6M 0s
00:46:30 3700K .......... .......... .......... .......... .......... 94% 22.3M 0s
00:46:30 3750K .......... .......... .......... .......... .......... 95% 13.9M 0s
00:46:30 3800K .......... .......... .......... .......... .......... 96% 15.3M 0s
00:46:30 3850K .......... .......... .......... .......... .......... 97% 19.0M 0s
00:46:30 3900K .......... .......... .......... .......... .......... 99% 23.1M 0s
00:46:30 3950K .......... .......... .......... ....... 100% 27.3M=0.2s
00:46:30
00:46:30 2026-02-12 00:46:30 (16.6 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/s3-2.34.6.jar’ saved [4083366/4083366]
00:46:30
00:46:30 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/auth/2.34.6/auth-2.34.6.jar
00:46:30 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:46:30 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:46:30 --2026-02-12 00:46:30-- https://repo1.maven.org/maven2/software/amazon/awssdk/auth/2.34.6/auth-2.34.6.jar
00:46:30 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
00:46:30 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:46:30 HTTP request sent, awaiting response... 200 OK
00:46:30 Length: 234962 (229K) [application/java-archive]
00:46:30 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/auth-2.34.6.jar’
00:46:30
00:46:30 0K .......... .......... .......... .......... .......... 21% 32.3M 0s
00:46:30 50K .......... .......... .......... .......... .......... 43% 3.59M 0s
00:46:30 100K .......... .......... .......... .......... .......... 65% 3.98M 0s
00:46:30 150K .......... .......... .......... .......... .......... 87% 40.1M 0s
00:46:30 200K .......... .......... ......... 100% 84.8M=0.03s
00:46:30
00:46:30 2026-02-12 00:46:30 (7.74 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/auth-2.34.6.jar’ saved [234962/234962]
00:46:30
00:46:30 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/aws-core/2.34.6/aws-core-2.34.6.jar
00:46:30 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:46:30 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:46:30 --2026-02-12 00:46:30-- https://repo1.maven.org/maven2/software/amazon/awssdk/aws-core/2.34.6/aws-core-2.34.6.jar
00:46:30 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:46:30 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:46:30 HTTP request sent, awaiting response... 200 OK
00:46:30 Length: 192161 (188K) [application/java-archive]
00:46:30 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-core-2.34.6.jar’
00:46:30
00:46:30 0K .......... .......... .......... .......... .......... 26% 36.3M 0s
00:46:30 50K .......... .......... .......... .......... .......... 53% 3.55M 0s
00:46:30 100K .......... .......... .......... .......... .......... 79% 142M 0s
00:46:30 150K .......... .......... .......... ....... 100% 2.81M=0.03s
00:46:30
00:46:30 2026-02-12 00:46:30 (6.42 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-core-2.34.6.jar’ saved [192161/192161]
00:46:30
00:46:30 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/sdk-core/2.34.6/sdk-core-2.34.6.jar
00:46:30 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:46:30 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:46:30 --2026-02-12 00:46:30-- https://repo1.maven.org/maven2/software/amazon/awssdk/sdk-core/2.34.6/sdk-core-2.34.6.jar
00:46:30 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:46:30 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:46:30 HTTP request sent, awaiting response... 200 OK
00:46:30 Length: 1037104 (1013K) [application/java-archive]
00:46:30 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/sdk-core-2.34.6.jar’
00:46:30
00:46:30 0K .......... .......... .......... .......... .......... 4% 3.52M 0s
00:46:30 50K .......... .......... .......... .......... .......... 9% 8.45M 0s
00:46:30 100K .......... .......... .......... .......... .......... 14% 4.51M 0s
00:46:30 150K .......... .......... .......... .......... .......... 19% 10.9M 0s
00:46:30 200K .......... .......... .......... .......... .......... 24% 13.3M 0s
00:46:30 250K .......... .......... .......... .......... .......... 29% 10.9M 0s
00:46:30 300K .......... .......... .......... .......... .......... 34% 15.7M 0s
00:46:30 350K .......... .......... .......... .......... .......... 39% 18.5M 0s
00:46:30 400K .......... .......... .......... .......... .......... 44% 26.8M 0s
00:46:30 450K .......... .......... .......... .......... .......... 49% 12.0M 0s
00:46:30 500K .......... .......... .......... .......... .......... 54% 16.7M 0s
00:46:30 550K .......... .......... .......... .......... .......... 59% 38.9M 0s
00:46:30 600K .......... .......... .......... .......... .......... 64% 13.4M 0s
00:46:30 650K .......... .......... .......... .......... .......... 69% 14.0M 0s
00:46:30 700K .......... .......... .......... .......... .......... 74% 16.6M 0s
00:46:30 750K .......... .......... .......... .......... .......... 78% 22.2M 0s
00:46:30 800K .......... .......... .......... .......... .......... 83% 29.2M 0s
00:46:30 850K .......... .......... .......... .......... .......... 88% 14.9M 0s
00:46:31 900K .......... .......... .......... .......... .......... 93% 26.2M 0s
00:46:31 950K .......... .......... .......... .......... .......... 98% 20.1M 0s
00:46:31 1000K .......... .. 100% 8.94M=0.08s
00:46:31
00:46:31 2026-02-12 00:46:31 (12.1 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/sdk-core-2.34.6.jar’ saved [1037104/1037104]
00:46:31
00:46:31 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/url-connection-client/2.34.6/url-connection-client-2.34.6.jar
00:46:31 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:46:31 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:46:31 --2026-02-12 00:46:31-- https://repo1.maven.org/maven2/software/amazon/awssdk/url-connection-client/2.34.6/url-connection-client-2.34.6.jar
00:46:31 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:46:31 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:46:31 HTTP request sent, awaiting response... 200 OK
00:46:31 Length: 33040 (32K) [application/java-archive]
00:46:31 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/url-connection-client-2.34.6.jar’
00:46:31
00:46:31 0K .......... .......... .......... .. 100% 35.6M=0.001s
00:46:31
00:46:31 2026-02-12 00:46:31 (35.6 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/url-connection-client-2.34.6.jar’ saved [33040/33040]
00:46:31
00:46:31 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/annotations/2.34.6/annotations-2.34.6.jar
00:46:31 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:46:31 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:46:31 --2026-02-12 00:46:31-- https://repo1.maven.org/maven2/software/amazon/awssdk/annotations/2.34.6/annotations-2.34.6.jar
00:46:31 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:46:31 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:46:31 HTTP request sent, awaiting response... 200 OK
00:46:31 Length: 13758 (13K) [application/java-archive]
00:46:31 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/annotations-2.34.6.jar’
00:46:31
00:46:31 0K .......... ... 100% 60.6M=0s
00:46:31
00:46:31 2026-02-12 00:46:31 (60.6 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/annotations-2.34.6.jar’ saved [13758/13758]
00:46:31
00:46:31 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/regions/2.34.6/regions-2.34.6.jar
00:46:31 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:46:31 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:46:31 --2026-02-12 00:46:31-- https://repo1.maven.org/maven2/software/amazon/awssdk/regions/2.34.6/regions-2.34.6.jar
00:46:31 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
00:46:31 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:46:31 HTTP request sent, awaiting response... 200 OK
00:46:31 Length: 962220 (940K) [application/java-archive]
00:46:31 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/regions-2.34.6.jar’
00:46:31
00:46:31 0K .......... .......... .......... .......... .......... 5% 3.52M 0s
00:46:31 50K .......... .......... .......... .......... .......... 10% 7.76M 0s
00:46:31 100K .......... .......... .......... .......... .......... 15% 4.88M 0s
00:46:31 150K .......... .......... .......... .......... .......... 21% 10.3M 0s
00:46:31 200K .......... .......... .......... .......... .......... 26% 12.9M 0s
00:46:31 250K .......... .......... .......... .......... .......... 31% 12.9M 0s
00:46:31 300K .......... .......... .......... .......... .......... 37% 15.6M 0s
00:46:31 350K .......... .......... .......... .......... .......... 42% 16.8M 0s
00:46:31 400K .......... .......... .......... .......... .......... 47% 27.3M 0s
00:46:31 450K .......... .......... .......... .......... .......... 53% 21.4M 0s
00:46:31 500K .......... .......... .......... .......... .......... 58% 14.5M 0s
00:46:31 550K .......... .......... .......... .......... .......... 63% 15.1M 0s
00:46:31 600K .......... .......... .......... .......... .......... 69% 16.6M 0s
00:46:31 650K .......... .......... .......... .......... .......... 74% 24.2M 0s
00:46:31 700K .......... .......... .......... .......... .......... 79% 24.2M 0s
00:46:31 750K .......... .......... .......... .......... .......... 85% 13.2M 0s
00:46:31 800K .......... .......... .......... .......... .......... 90% 12.6M 0s
00:46:31 850K .......... .......... .......... .......... .......... 95% 26.5M 0s
00:46:31 900K .......... .......... .......... ......... 100% 16.8M=0.08s
00:46:31
00:46:31 2026-02-12 00:46:31 (11.8 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/regions-2.34.6.jar’ saved [962220/962220]
00:46:31
00:46:31 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/identity-spi/2.34.6/identity-spi-2.34.6.jar
00:46:31 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:46:31 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:46:31 --2026-02-12 00:46:31-- https://repo1.maven.org/maven2/software/amazon/awssdk/identity-spi/2.34.6/identity-spi-2.34.6.jar
00:46:32 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:46:32 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:46:32 HTTP request sent, awaiting response... 200 OK
00:46:32 Length: 30963 (30K) [application/java-archive]
00:46:32 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/identity-spi-2.34.6.jar’
00:46:32
00:46:32 0K .......... .......... .......... 100% 35.2M=0.001s
00:46:32
00:46:32 2026-02-12 00:46:32 (35.2 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/identity-spi-2.34.6.jar’ saved [30963/30963]
00:46:32
00:46:32 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/utils/2.34.6/utils-2.34.6.jar
00:46:32 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:46:32 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:46:32 --2026-02-12 00:46:32-- https://repo1.maven.org/maven2/software/amazon/awssdk/utils/2.34.6/utils-2.34.6.jar
00:46:32 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
00:46:32 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:46:32 HTTP request sent, awaiting response... 200 OK
00:46:32 Length: 241618 (236K) [application/java-archive]
00:46:32 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/utils-2.34.6.jar’
00:46:32
00:46:32 0K .......... .......... .......... .......... .......... 21% 31.8M 0s
00:46:32 50K .......... .......... .......... .......... .......... 42% 3.46M 0s
00:46:32 100K .......... .......... .......... .......... .......... 63% 74.1M 0s
00:46:32 150K .......... .......... .......... .......... .......... 84% 3.58M 0s
00:46:32 200K .......... .......... .......... ..... 100% 247M=0.03s
00:46:32
00:46:32 2026-02-12 00:46:32 (7.66 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/utils-2.34.6.jar’ saved [241618/241618]
00:46:32
00:46:32 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/http-client-spi/2.34.6/http-client-spi-2.34.6.jar
00:46:32 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:46:32 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:46:32 --2026-02-12 00:46:32-- https://repo1.maven.org/maven2/software/amazon/awssdk/http-client-spi/2.34.6/http-client-spi-2.34.6.jar
00:46:32 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:46:32 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:46:32 HTTP request sent, awaiting response... 200 OK
00:46:32 Length: 91685 (90K) [application/java-archive]
00:46:32 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-client-spi-2.34.6.jar’
00:46:32
00:46:32 0K .......... .......... .......... .......... .......... 55% 3.57M 0s
00:46:32 50K .......... .......... .......... ......... 100% 8.66M=0.02s
00:46:32
00:46:32 2026-02-12 00:46:32 (4.82 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-client-spi-2.34.6.jar’ saved [91685/91685]
00:46:32
00:46:32 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/retries/2.34.6/retries-2.34.6.jar
00:46:32 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:46:32 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:46:32 --2026-02-12 00:46:32-- https://repo1.maven.org/maven2/software/amazon/awssdk/retries/2.34.6/retries-2.34.6.jar
00:46:32 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:46:32 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:46:32 HTTP request sent, awaiting response... 200 OK
00:46:33 Length: 66309 (65K) [application/java-archive]
00:46:33 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/retries-2.34.6.jar’
00:46:33
00:46:33 0K .......... .......... .......... .......... .......... 77% 3.54M 0s
00:46:33 50K .......... .... 100% 7.73M=0.02s
00:46:33
00:46:33 2026-02-12 00:46:33 (4.03 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/retries-2.34.6.jar’ saved [66309/66309]
00:46:33
00:46:33 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/com/fasterxml/jackson/core/jackson-core/2.20.0/jackson-core-2.20.0.jar
00:46:33 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:46:33 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:46:33 --2026-02-12 00:46:33-- https://repo1.maven.org/maven2/com/fasterxml/jackson/core/jackson-core/2.20.0/jackson-core-2.20.0.jar
00:46:33 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:46:33 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:46:33 HTTP request sent, awaiting response... 200 OK
00:46:33 Length: 593063 (579K) [application/java-archive]
00:46:33 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/jackson-core-2.20.0.jar’
00:46:33
00:46:33 0K .......... .......... .......... .......... .......... 8% 34.7M 0s
00:46:33 50K .......... .......... .......... .......... .......... 17% 3.62M 0s
00:46:33 100K .......... .......... .......... .......... .......... 25% 3.96M 0s
00:46:33 150K .......... .......... .......... .......... .......... 34% 41.2M 0s
00:46:33 200K .......... .......... .......... .......... .......... 43% 135M 0s
00:46:33 250K .......... .......... .......... .......... .......... 51% 48.5M 0s
00:46:33 300K .......... .......... .......... .......... .......... 60% 292M 0s
00:46:33 350K .......... .......... .......... .......... .......... 69% 4.40M 0s
00:46:33 400K .......... .......... .......... .......... .......... 77% 39.5M 0s
00:46:33 450K .......... .......... .......... .......... .......... 86% 45.4M 0s
00:46:33 500K .......... .......... .......... .......... .......... 94% 329M 0s
00:46:33 550K .......... .......... ......... 100% 130M=0.04s
00:46:33
00:46:33 2026-02-12 00:46:33 (12.9 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/jackson-core-2.20.0.jar’ saved [593063/593063]
00:46:33
00:46:33 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/com/fasterxml/jackson/core/jackson-databind/2.20.0/jackson-databind-2.20.0.jar
00:46:33 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:46:33 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:46:33 --2026-02-12 00:46:33-- https://repo1.maven.org/maven2/com/fasterxml/jackson/core/jackson-databind/2.20.0/jackson-databind-2.20.0.jar
00:46:33 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:46:33 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:46:33 HTTP request sent, awaiting response... 200 OK
00:46:33 Length: 1688471 (1.6M) [application/java-archive]
00:46:33 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/jackson-databind-2.20.0.jar’
00:46:33
00:46:33 0K .......... .......... .......... .......... .......... 3% 35.7M 0s
00:46:33 50K .......... .......... .......... .......... .......... 6% 3.37M 0s
00:46:33 100K .......... .......... .......... .......... .......... 9% 70.2M 0s
00:46:33 150K .......... .......... .......... .......... .......... 12% 3.60M 0s
00:46:33 200K .......... .......... .......... .......... .......... 15% 292M 0s
00:46:33 250K .......... .......... .......... .......... .......... 18% 46.4M 0s
00:46:33 300K .......... .......... .......... .......... .......... 21% 54.3M 0s
00:46:33 350K .......... .......... .......... .......... .......... 24% 57.8M 0s
00:46:33 400K .......... .......... .......... .......... .......... 27% 4.22M 0s
00:46:33 450K .......... .......... .......... .......... .......... 30% 47.6M 0s
00:46:33 500K .......... .......... .......... .......... .......... 33% 221M 0s
00:46:33 550K .......... .......... .......... .......... .......... 36% 56.5M 0s
00:46:33 600K .......... .......... .......... .......... .......... 39% 297M 0s
00:46:33 650K .......... .......... .......... .......... .......... 42% 3.85M 0s
00:46:33 700K .......... .......... .......... .......... .......... 45% 74.8M 0s
00:46:33 750K .......... .......... .......... .......... .......... 48% 275M 0s
00:46:33 800K .......... .......... .......... .......... .......... 51% 50.8M 0s
00:46:33 850K .......... .......... .......... .......... .......... 54% 4.60M 0s
00:46:33 900K .......... .......... .......... .......... .......... 57% 18.2M 0s
00:46:33 950K .......... .......... .......... .......... .......... 60% 278M 0s
00:46:33 1000K .......... .......... .......... .......... .......... 63% 55.0M 0s
00:46:33 1050K .......... .......... .......... .......... .......... 66% 289M 0s
00:46:33 1100K .......... .......... .......... .......... .......... 69% 45.9M 0s
00:46:33 1150K .......... .......... .......... .......... .......... 72% 5.01M 0s
00:46:33 1200K .......... .......... .......... .......... .......... 75% 19.2M 0s
00:46:33 1250K .......... .......... .......... .......... .......... 78% 53.5M 0s
00:46:33 1300K .......... .......... .......... .......... .......... 81% 43.5M 0s
00:46:33 1350K .......... .......... .......... .......... .......... 84% 127M 0s
00:46:33 1400K .......... .......... .......... .......... .......... 87% 5.22M 0s
00:46:33 1450K .......... .......... .......... .......... .......... 90% 12.8M 0s
00:46:33 1500K .......... .......... .......... .......... .......... 94% 17.0M 0s
00:46:33 1550K .......... .......... .......... .......... .......... 97% 18.5M 0s
00:46:33 1600K .......... .......... .......... .......... ........ 100% 17.4M=0.1s
00:46:33
00:46:33 2026-02-12 00:46:33 (14.2 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/jackson-databind-2.20.0.jar’ saved [1688471/1688471]
00:46:33
00:46:33 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/com/fasterxml/jackson/datatype/jackson-datatype-jdk8/2.20.0/jackson-datatype-jdk8-2.20.0.jar
00:46:33 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:46:33 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:46:33 --2026-02-12 00:46:33-- https://repo1.maven.org/maven2/com/fasterxml/jackson/datatype/jackson-datatype-jdk8/2.20.0/jackson-datatype-jdk8-2.20.0.jar
00:46:33 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:46:33 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:46:33 HTTP request sent, awaiting response... 200 OK
00:46:34 Length: 36400 (36K) [application/java-archive]
00:46:34 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/jackson-datatype-jdk8-2.20.0.jar’
00:46:34
00:46:34 0K .......... .......... .......... ..... 100% 32.0M=0.001s
00:46:34
00:46:34 2026-02-12 00:46:34 (32.0 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/jackson-datatype-jdk8-2.20.0.jar’ saved [36400/36400]
00:46:34
00:46:34 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/com/fasterxml/jackson/core/jackson-annotations/2.20/jackson-annotations-2.20.jar
00:46:34 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:46:34 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:46:34 --2026-02-12 00:46:34-- https://repo1.maven.org/maven2/com/fasterxml/jackson/core/jackson-annotations/2.20/jackson-annotations-2.20.jar
00:46:34 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:46:34 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:46:34 HTTP request sent, awaiting response... 200 OK
00:46:34 Length: 79195 (77K) [application/java-archive]
00:46:34 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/jackson-annotations-2.20.jar’
00:46:34
00:46:34 0K .......... .......... .......... .......... .......... 64% 35.6M 0s
00:46:34 50K .......... .......... ....... 100% 2.00M=0.01s
00:46:34
00:46:34 2026-02-12 00:46:34 (5.13 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/jackson-annotations-2.20.jar’ saved [79195/79195]
00:46:34
00:46:34 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo.maven.apache.org/maven2/ch/qos/logback/logback-classic/1.3.14/logback-classic-1.3.14.jar
00:46:34 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:46:34 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:46:34 --2026-02-12 00:46:34-- https://repo.maven.apache.org/maven2/ch/qos/logback/logback-classic/1.3.14/logback-classic-1.3.14.jar
00:46:34 Resolving repo.maven.apache.org (repo.maven.apache.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:46:34 Connecting to repo.maven.apache.org (repo.maven.apache.org)|104.18.18.12|:443... connected.
00:46:34 HTTP request sent, awaiting response... 200 OK
00:46:34 Length: 277829 (271K) [application/java-archive]
00:46:34 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/logback-classic-1.3.14.jar’
00:46:34
00:46:34 0K .......... .......... .......... .......... .......... 18% 31.2M 0s
00:46:34 50K .......... .......... .......... .......... .......... 36% 3.57M 0s
00:46:34 100K .......... .......... .......... .......... .......... 55% 4.10M 0s
00:46:34 150K .......... .......... .......... .......... .......... 73% 31.6M 0s
00:46:34 200K .......... .......... .......... .......... .......... 92% 73.6M 0s
00:46:34 250K .......... .......... . 100% 312M=0.03s
00:46:34
00:46:34 2026-02-12 00:46:34 (9.00 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/logback-classic-1.3.14.jar’ saved [277829/277829]
00:46:34
00:46:34 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo.maven.apache.org/maven2/ch/qos/logback/logback-core/1.3.14/logback-core-1.3.14.jar
00:46:34 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:46:34 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:46:34 --2026-02-12 00:46:34-- https://repo.maven.apache.org/maven2/ch/qos/logback/logback-core/1.3.14/logback-core-1.3.14.jar
00:46:34 Resolving repo.maven.apache.org (repo.maven.apache.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
00:46:34 Connecting to repo.maven.apache.org (repo.maven.apache.org)|104.18.19.12|:443... connected.
00:46:34 HTTP request sent, awaiting response... 200 OK
00:46:34 Length: 579673 (566K) [application/java-archive]
00:46:34 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/logback-core-1.3.14.jar’
00:46:34
00:46:34 0K .......... .......... .......... .......... .......... 8% 3.51M 0s
00:46:34 50K .......... .......... .......... .......... .......... 17% 7.69M 0s
00:46:34 100K .......... .......... .......... .......... .......... 26% 4.97M 0s
00:46:34 150K .......... .......... .......... .......... .......... 35% 10.4M 0s
00:46:34 200K .......... .......... .......... .......... .......... 44% 13.1M 0s
00:46:34 250K .......... .......... .......... .......... .......... 52% 10.7M 0s
00:46:35 300K .......... .......... .......... .......... .......... 61% 17.6M 0s
00:46:35 350K .......... .......... .......... .......... .......... 70% 19.7M 0s
00:46:35 400K .......... .......... .......... .......... .......... 79% 20.6M 0s
00:46:35 450K .......... .......... .......... .......... .......... 88% 15.2M 0s
00:46:35 500K .......... .......... .......... .......... .......... 97% 13.1M 0s
00:46:35 550K .......... ...... 100% 214M=0.06s
00:46:35
00:46:35 2026-02-12 00:46:35 (9.58 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/logback-core-1.3.14.jar’ saved [579673/579673]
00:46:35
00:46:35 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo.maven.apache.org/maven2/dev/zarr/zarr-java/0.0.10/zarr-java-0.0.10.jar
00:46:35 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:46:35 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:46:35 --2026-02-12 00:46:35-- https://repo.maven.apache.org/maven2/dev/zarr/zarr-java/0.0.10/zarr-java-0.0.10.jar
00:46:35 Resolving repo.maven.apache.org (repo.maven.apache.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:46:35 Connecting to repo.maven.apache.org (repo.maven.apache.org)|104.18.18.12|:443... connected.
00:46:35 HTTP request sent, awaiting response... 200 OK
00:46:35 Length: 175836 (172K) [application/java-archive]
00:46:35 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/zarr-java-0.0.10.jar’
00:46:35
00:46:35 0K .......... .......... .......... .......... .......... 29% 26.8M 0s
00:46:35 50K .......... .......... .......... .......... .......... 58% 3.62M 0s
00:46:35 100K .......... .......... .......... .......... .......... 87% 4.01M 0s
00:46:35 150K .......... .......... . 100% 19.8M=0.03s
00:46:35
00:46:35 2026-02-12 00:46:35 (5.87 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/zarr-java-0.0.10.jar’ saved [175836/175836]
00:46:35
00:46:35 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo.maven.apache.org/maven2/com/github/ben-manes/caffeine/caffeine/3.1.8/caffeine-3.1.8.jar
00:46:35 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:46:35 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:46:35 --2026-02-12 00:46:35-- https://repo.maven.apache.org/maven2/com/github/ben-manes/caffeine/caffeine/3.1.8/caffeine-3.1.8.jar
00:46:35 Resolving repo.maven.apache.org (repo.maven.apache.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:46:35 Connecting to repo.maven.apache.org (repo.maven.apache.org)|104.18.18.12|:443... connected.
00:46:35 HTTP request sent, awaiting response... 200 OK
00:46:35 Length: 889211 (868K) [application/java-archive]
00:46:35 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/caffeine-3.1.8.jar’
00:46:35
00:46:35 0K .......... .......... .......... .......... .......... 5% 31.8M 0s
00:46:35 50K .......... .......... .......... .......... .......... 11% 3.22M 0s
00:46:35 100K .......... .......... .......... .......... .......... 17% 177M 0s
00:46:35 150K .......... .......... .......... .......... .......... 23% 3.44M 0s
00:46:35 200K .......... .......... .......... .......... .......... 28% 126M 0s
00:46:35 250K .......... .......... .......... .......... .......... 34% 58.2M 0s
00:46:35 300K .......... .......... .......... .......... .......... 40% 65.9M 0s
00:46:35 350K .......... .......... .......... .......... .......... 46% 4.22M 0s
00:46:35 400K .......... .......... .......... .......... .......... 51% 22.4M 0s
00:46:35 450K .......... .......... .......... .......... .......... 57% 118M 0s
00:46:35 500K .......... .......... .......... .......... .......... 63% 286M 0s
00:46:35 550K .......... .......... .......... .......... .......... 69% 50.4M 0s
00:46:35 600K .......... .......... .......... .......... .......... 74% 41.9M 0s
00:46:35 650K .......... .......... .......... .......... .......... 80% 4.04M 0s
00:46:35 700K .......... .......... .......... .......... .......... 86% 31.8M 0s
00:46:35 750K .......... .......... .......... .......... .......... 92% 310M 0s
00:46:35 800K .......... .......... .......... .......... .......... 97% 84.9M 0s
00:46:35 850K .......... ........ 100% 140M=0.06s
00:46:35
00:46:35 2026-02-12 00:46:35 (13.2 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/caffeine-3.1.8.jar’ saved [889211/889211]
00:46:35
00:46:35 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo.maven.apache.org/maven2/org/apache/tika/tika-core/1.28.5/tika-core-1.28.5.jar
00:46:35 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:46:35 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:46:35 --2026-02-12 00:46:35-- https://repo.maven.apache.org/maven2/org/apache/tika/tika-core/1.28.5/tika-core-1.28.5.jar
00:46:35 Resolving repo.maven.apache.org (repo.maven.apache.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:46:35 Connecting to repo.maven.apache.org (repo.maven.apache.org)|104.18.18.12|:443... connected.
00:46:35 HTTP request sent, awaiting response... 200 OK
00:46:35 Length: 736051 (719K) [application/java-archive]
00:46:35 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/tika-core-1.28.5.jar’
00:46:35
00:46:35 0K .......... .......... .......... .......... .......... 6% 36.1M 0s
00:46:35 50K .......... .......... .......... .......... .......... 13% 3.57M 0s
00:46:35 100K .......... .......... .......... .......... .......... 20% 4.13M 0s
00:46:35 150K .......... .......... .......... .......... .......... 27% 27.6M 0s
00:46:35 200K .......... .......... .......... .......... .......... 34% 69.4M 0s
00:46:35 250K .......... .......... .......... .......... .......... 41% 116M 0s
00:46:35 300K .......... .......... .......... .......... .......... 48% 57.5M 0s
00:46:35 350K .......... .......... .......... .......... .......... 55% 68.7M 0s
00:46:35 400K .......... .......... .......... .......... .......... 62% 4.33M 0s
00:46:35 450K .......... .......... .......... .......... .......... 69% 70.1M 0s
00:46:35 500K .......... .......... .......... .......... .......... 76% 224M 0s
00:46:35 550K .......... .......... .......... .......... .......... 83% 53.3M 0s
00:46:35 600K .......... .......... .......... .......... .......... 90% 74.0M 0s
00:46:35 650K .......... .......... .......... .......... .......... 97% 4.38M 0s
00:46:35 700K .......... ........ 100% 165M=0.06s
00:46:35
00:46:35 2026-02-12 00:46:35 (12.5 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/tika-core-1.28.5.jar’ saved [736051/736051]
00:46:35
00:46:35 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/com/squareup/okhttp/okhttp/2.7.5/okhttp-2.7.5.jar
00:46:35 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:46:35 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:46:35 --2026-02-12 00:46:35-- https://repo1.maven.org/maven2/com/squareup/okhttp/okhttp/2.7.5/okhttp-2.7.5.jar
00:46:36 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:46:36 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:46:36 HTTP request sent, awaiting response... 200 OK
00:46:36 Length: 331034 (323K) [application/java-archive]
00:46:36 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/okhttp-2.7.5.jar’
00:46:36
00:46:36 0K .......... .......... .......... .......... .......... 15% 32.9M 0s
00:46:36 50K .......... .......... .......... .......... .......... 30% 3.63M 0s
00:46:36 100K .......... .......... .......... .......... .......... 46% 75.5M 0s
00:46:36 150K .......... .......... .......... .......... .......... 61% 3.76M 0s
00:46:36 200K .......... .......... .......... .......... .......... 77% 153M 0s
00:46:36 250K .......... .......... .......... .......... .......... 92% 58.4M 0s
00:46:36 300K .......... .......... ... 100% 203M=0.03s
00:46:36
00:46:36 2026-02-12 00:46:36 (10.6 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/okhttp-2.7.5.jar’ saved [331034/331034]
00:46:36
00:46:36 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/com/github/luben/zstd-jni/1.5.5-7/zstd-jni-1.5.5-7.jar
00:46:36 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:46:36 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:46:36 --2026-02-12 00:46:36-- https://repo1.maven.org/maven2/com/github/luben/zstd-jni/1.5.5-7/zstd-jni-1.5.5-7.jar
00:46:36 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:46:36 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:46:36 HTTP request sent, awaiting response... 200 OK
00:46:36 Length: 6749842 (6.4M) [application/java-archive]
00:46:36 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/zstd-jni-1.5.5-7.jar’
00:46:36
00:46:36 0K .......... .......... .......... .......... .......... 0% 32.6M 0s
00:46:36 50K .......... .......... .......... .......... .......... 1% 3.61M 1s
00:46:36 100K .......... .......... .......... .......... .......... 2% 78.2M 1s
00:46:36 150K .......... .......... .......... .......... .......... 3% 3.76M 1s
00:46:36 200K .......... .......... .......... .......... .......... 3% 125M 1s
00:46:36 250K .......... .......... .......... .......... .......... 4% 216M 1s
00:46:36 300K .......... .......... .......... .......... .......... 5% 38.3M 1s
00:46:36 350K .......... .......... .......... .......... .......... 6% 311M 0s
00:46:36 400K .......... .......... .......... .......... .......... 6% 4.14M 1s
00:46:36 450K .......... .......... .......... .......... .......... 7% 299M 1s
00:46:36 500K .......... .......... .......... .......... .......... 8% 157M 0s
00:46:36 550K .......... .......... .......... .......... .......... 9% 35.5M 0s
00:46:36 600K .......... .......... .......... .......... .......... 9% 113M 0s
00:46:36 650K .......... .......... .......... .......... .......... 10% 4.28M 0s
00:46:36 700K .......... .......... .......... .......... .......... 11% 145M 0s
00:46:36 750K .......... .......... .......... .......... .......... 12% 246M 0s
00:46:36 800K .......... .......... .......... .......... .......... 12% 35.4M 0s
00:46:36 850K .......... .......... .......... .......... .......... 13% 118M 0s
00:46:36 900K .......... .......... .......... .......... .......... 14% 4.87M 0s
00:46:36 950K .......... .......... .......... .......... .......... 15% 25.9M 0s
00:46:36 1000K .......... .......... .......... .......... .......... 15% 157M 0s
00:46:36 1050K .......... .......... .......... .......... .......... 16% 44.6M 0s
00:46:36 1100K .......... .......... .......... .......... .......... 17% 91.2M 0s
00:46:36 1150K .......... .......... .......... .......... .......... 18% 5.00M 0s
00:46:36 1200K .......... .......... .......... .......... .......... 18% 25.1M 0s
00:46:36 1250K .......... .......... .......... .......... .......... 19% 123M 0s
00:46:36 1300K .......... .......... .......... .......... .......... 20% 48.8M 0s
00:46:36 1350K .......... .......... .......... .......... .......... 21% 92.4M 0s
00:46:36 1400K .......... .......... .......... .......... .......... 21% 4.95M 0s
00:46:36 1450K .......... .......... .......... .......... .......... 22% 18.4M 0s
00:46:36 1500K .......... .......... .......... .......... .......... 23% 18.0M 0s
00:46:36 1550K .......... .......... .......... .......... .......... 24% 25.9M 0s
00:46:36 1600K .......... .......... .......... .......... .......... 25% 26.1M 0s
00:46:36 1650K .......... .......... .......... .......... .......... 25% 10.9M 0s
00:46:36 1700K .......... .......... .......... .......... .......... 26% 18.7M 0s
00:46:36 1750K .......... .......... .......... .......... .......... 27% 24.6M 0s
00:46:36 1800K .......... .......... .......... .......... .......... 28% 18.2M 0s
00:46:36 1850K .......... .......... .......... .......... .......... 28% 25.4M 0s
00:46:36 1900K .......... .......... .......... .......... .......... 29% 11.0M 0s
00:46:36 1950K .......... .......... .......... .......... .......... 30% 14.7M 0s
00:46:36 2000K .......... .......... .......... .......... .......... 31% 33.1M 0s
00:46:36 2050K .......... .......... .......... .......... .......... 31% 26.4M 0s
00:46:36 2100K .......... .......... .......... .......... .......... 32% 24.5M 0s
00:46:36 2150K .......... .......... .......... .......... .......... 33% 18.2M 0s
00:46:36 2200K .......... .......... .......... .......... .......... 34% 8.75M 0s
00:46:36 2250K .......... .......... .......... .......... .......... 34% 30.9M 0s
00:46:36 2300K .......... .......... .......... .......... .......... 35% 26.2M 0s
00:46:36 2350K .......... .......... .......... .......... .......... 36% 25.2M 0s
00:46:36 2400K .......... .......... .......... .......... .......... 37% 18.7M 0s
00:46:36 2450K .......... .......... .......... .......... .......... 37% 8.61M 0s
00:46:36 2500K .......... .......... .......... .......... .......... 38% 54.5M 0s
00:46:36 2550K .......... .......... .......... .......... .......... 39% 18.1M 0s
00:46:36 2600K .......... .......... .......... .......... .......... 40% 22.6M 0s
00:46:36 2650K .......... .......... .......... .......... .......... 40% 18.2M 0s
00:46:36 2700K .......... .......... .......... .......... .......... 41% 9.35M 0s
00:46:36 2750K .......... .......... .......... .......... .......... 42% 25.4M 0s
00:46:36 2800K .......... .......... .......... .......... .......... 43% 25.5M 0s
00:46:36 2850K .......... .......... .......... .......... .......... 43% 26.2M 0s
00:46:36 2900K .......... .......... .......... .......... .......... 44% 23.8M 0s
00:46:36 2950K .......... .......... .......... .......... .......... 45% 10.2M 0s
00:46:36 3000K .......... .......... .......... .......... .......... 46% 15.8M 0s
00:46:36 3050K .......... .......... .......... .......... .......... 47% 24.7M 0s
00:46:36 3100K .......... .......... .......... .......... .......... 47% 27.7M 0s
00:46:36 3150K .......... .......... .......... .......... .......... 48% 23.6M 0s
00:46:36 3200K .......... .......... .......... .......... .......... 49% 10.6M 0s
00:46:36 3250K .......... .......... .......... .......... .......... 50% 15.0M 0s
00:46:36 3300K .......... .......... .......... .......... .......... 50% 22.7M 0s
00:46:36 3350K .......... .......... .......... .......... .......... 51% 23.9M 0s
00:46:36 3400K .......... .......... .......... .......... .......... 52% 21.7M 0s
00:46:36 3450K .......... .......... .......... .......... .......... 53% 9.67M 0s
00:46:36 3500K .......... .......... .......... .......... .......... 53% 21.0M 0s
00:46:36 3550K .......... .......... .......... .......... .......... 54% 22.7M 0s
00:46:36 3600K .......... .......... .......... .......... .......... 55% 26.3M 0s
00:46:36 3650K .......... .......... .......... .......... .......... 56% 21.9M 0s
00:46:36 3700K .......... .......... .......... .......... .......... 56% 24.4M 0s
00:46:36 3750K .......... .......... .......... .......... .......... 57% 8.68M 0s
00:46:36 3800K .......... .......... .......... .......... .......... 58% 30.1M 0s
00:46:36 3850K .......... .......... .......... .......... .......... 59% 31.3M 0s
00:46:36 3900K .......... .......... .......... .......... .......... 59% 16.9M 0s
00:46:36 3950K .......... .......... .......... .......... .......... 60% 23.1M 0s
00:46:36 4000K .......... .......... .......... .......... .......... 61% 8.96M 0s
00:46:36 4050K .......... .......... .......... .......... .......... 62% 22.7M 0s
00:46:36 4100K .......... .......... .......... .......... .......... 62% 27.2M 0s
00:46:36 4150K .......... .......... .......... .......... .......... 63% 23.1M 0s
00:46:36 4200K .......... .......... .......... .......... .......... 64% 23.5M 0s
00:46:36 4250K .......... .......... .......... .......... .......... 65% 13.0M 0s
00:46:36 4300K .......... .......... .......... .......... .......... 65% 15.3M 0s
00:46:36 4350K .......... .......... .......... .......... .......... 66% 19.7M 0s
00:46:36 4400K .......... .......... .......... .......... .......... 67% 22.9M 0s
00:46:36 4450K .......... .......... .......... .......... .......... 68% 19.9M 0s
00:46:36 4500K .......... .......... .......... .......... .......... 69% 13.1M 0s
00:46:36 4550K .......... .......... .......... .......... .......... 69% 13.9M 0s
00:46:36 4600K .......... .......... .......... .......... .......... 70% 27.1M 0s
00:46:36 4650K .......... .......... .......... .......... .......... 71% 22.6M 0s
00:46:36 4700K .......... .......... .......... .......... .......... 72% 25.0M 0s
00:46:36 4750K .......... .......... .......... .......... .......... 72% 11.7M 0s
00:46:36 4800K .......... .......... .......... .......... .......... 73% 13.5M 0s
00:46:36 4850K .......... .......... .......... .......... .......... 74% 19.3M 0s
00:46:36 4900K .......... .......... .......... .......... .......... 75% 25.5M 0s
00:46:36 4950K .......... .......... .......... .......... .......... 75% 25.2M 0s
00:46:36 5000K .......... .......... .......... .......... .......... 76% 13.2M 0s
00:46:36 5050K .......... .......... .......... .......... .......... 77% 13.9M 0s
00:46:36 5100K .......... .......... .......... .......... .......... 78% 28.1M 0s
00:46:36 5150K .......... .......... .......... .......... .......... 78% 15.9M 0s
00:46:36 5200K .......... .......... .......... .......... .......... 79% 25.5M 0s
00:46:36 5250K .......... .......... .......... .......... .......... 80% 13.2M 0s
00:46:36 5300K .......... .......... .......... .......... .......... 81% 15.4M 0s
00:46:36 5350K .......... .......... .......... .......... .......... 81% 27.2M 0s
00:46:36 5400K .......... .......... .......... .......... .......... 82% 22.3M 0s
00:46:36 5450K .......... .......... .......... .......... .......... 83% 20.9M 0s
00:46:36 5500K .......... .......... .......... .......... .......... 84% 34.0M 0s
00:46:36 5550K .......... .......... .......... .......... .......... 84% 8.18M 0s
00:46:36 5600K .......... .......... .......... .......... .......... 85% 29.5M 0s
00:46:36 5650K .......... .......... .......... .......... .......... 86% 21.3M 0s
00:46:36 5700K .......... .......... .......... .......... .......... 87% 22.0M 0s
00:46:36 5750K .......... .......... .......... .......... .......... 87% 29.8M 0s
00:46:36 5800K .......... .......... .......... .......... .......... 88% 10.1M 0s
00:46:36 5850K .......... .......... .......... .......... .......... 89% 28.3M 0s
00:46:36 5900K .......... .......... .......... .......... .......... 90% 16.7M 0s
00:46:36 5950K .......... .......... .......... .......... .......... 91% 16.6M 0s
00:46:36 6000K .......... .......... .......... .......... .......... 91% 34.9M 0s
00:46:36 6050K .......... .......... .......... .......... .......... 92% 8.74M 0s
00:46:36 6100K .......... .......... .......... .......... .......... 93% 30.4M 0s
00:46:36 6150K .......... .......... .......... .......... .......... 94% 21.4M 0s
00:46:36 6200K .......... .......... .......... .......... .......... 94% 18.5M 0s
00:46:36 6250K .......... .......... .......... .......... .......... 95% 25.3M 0s
00:46:36 6300K .......... .......... .......... .......... .......... 96% 9.64M 0s
00:46:36 6350K .......... .......... .......... .......... .......... 97% 27.9M 0s
00:46:36 6400K .......... .......... .......... .......... .......... 97% 15.9M 0s
00:46:36 6450K .......... .......... .......... .......... .......... 98% 26.6M 0s
00:46:36 6500K .......... .......... .......... .......... .......... 99% 18.2M 0s
00:46:36 6550K .......... .......... .......... .......... . 100% 23.1M=0.4s
00:46:36
00:46:36 2026-02-12 00:46:36 (17.2 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/zstd-jni-1.5.5-7.jar’ saved [6749842/6749842]
00:46:36
00:46:36 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/com/scalableminds/blosc-java/0.1-1.21.4/blosc-java-0.1-1.21.4.jar
00:46:36 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:46:36 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:46:36 --2026-02-12 00:46:36-- https://repo1.maven.org/maven2/com/scalableminds/blosc-java/0.1-1.21.4/blosc-java-0.1-1.21.4.jar
00:46:37 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:46:37 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:46:37 HTTP request sent, awaiting response... 200 OK
00:46:37 Length: 1732435 (1.7M) [application/java-archive]
00:46:37 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/blosc-java-0.1-1.21.4.jar’
00:46:37
00:46:37 0K .......... .......... .......... .......... .......... 2% 34.1M 0s
00:46:37 50K .......... .......... .......... .......... .......... 5% 3.62M 0s
00:46:37 100K .......... .......... .......... .......... .......... 8% 39.7M 0s
00:46:37 150K .......... .......... .......... .......... .......... 11% 3.86M 0s
00:46:37 200K .......... .......... .......... .......... .......... 14% 55.3M 0s
00:46:37 250K .......... .......... .......... .......... .......... 17% 49.2M 0s
00:46:37 300K .......... .......... .......... .......... .......... 20% 50.9M 0s
00:46:37 350K .......... .......... .......... .......... .......... 23% 5.36M 0s
00:46:37 400K .......... .......... .......... .......... .......... 26% 29.4M 0s
00:46:37 450K .......... .......... .......... .......... .......... 29% 27.6M 0s
00:46:37 500K .......... .......... .......... .......... .......... 32% 39.8M 0s
00:46:37 550K .......... .......... .......... .......... .......... 35% 125M 0s
00:46:37 600K .......... .......... .......... .......... .......... 38% 89.1M 0s
00:46:37 650K .......... .......... .......... .......... .......... 41% 4.54M 0s
00:46:37 700K .......... .......... .......... .......... .......... 44% 26.2M 0s
00:46:37 750K .......... .......... .......... .......... .......... 47% 106M 0s
00:46:37 800K .......... .......... .......... .......... .......... 50% 233M 0s
00:46:37 850K .......... .......... .......... .......... .......... 53% 44.9M 0s
00:46:37 900K .......... .......... .......... .......... .......... 56% 4.91M 0s
00:46:37 950K .......... .......... .......... .......... .......... 59% 109M 0s
00:46:37 1000K .......... .......... .......... .......... .......... 62% 24.1M 0s
00:46:37 1050K .......... .......... .......... .......... .......... 65% 69.0M 0s
00:46:37 1100K .......... .......... .......... .......... .......... 67% 84.1M 0s
00:46:37 1150K .......... .......... .......... .......... .......... 70% 4.76M 0s
00:46:37 1200K .......... .......... .......... .......... .......... 73% 159M 0s
00:46:37 1250K .......... .......... .......... .......... .......... 76% 20.8M 0s
00:46:37 1300K .......... .......... .......... .......... .......... 79% 83.2M 0s
00:46:37 1350K .......... .......... .......... .......... .......... 82% 248M 0s
00:46:37 1400K .......... .......... .......... .......... .......... 85% 6.20M 0s
00:46:37 1450K .......... .......... .......... .......... .......... 88% 11.1M 0s
00:46:37 1500K .......... .......... .......... .......... .......... 91% 17.3M 0s
00:46:37 1550K .......... .......... .......... .......... .......... 94% 24.4M 0s
00:46:37 1600K .......... .......... .......... .......... .......... 97% 17.2M 0s
00:46:37 1650K .......... .......... .......... .......... . 100% 24.0M=0.1s
00:46:37
00:46:37 2026-02-12 00:46:37 (15.0 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/blosc-java-0.1-1.21.4.jar’ saved [1732435/1732435]
00:46:37
00:46:37 + for x in *.jar
00:46:37 + mv omero-zarr-pixel-buffer-0.6.2-SNAPSHOT.jar /home/omero/workspace/OMERO-server/OMERO.server/lib/server
00:46:37 + source /home/omero/workspace/OMERO-server/.venv3/bin/activate
00:46:37 ++ deactivate nondestructive
00:46:37 ++ '[' -n '' ']'
00:46:37 ++ '[' -n '' ']'
00:46:37 ++ hash -r
00:46:37 ++ '[' -n '' ']'
00:46:37 ++ unset VIRTUAL_ENV
00:46:37 ++ unset VIRTUAL_ENV_PROMPT
00:46:37 ++ '[' '!' nondestructive = nondestructive ']'
00:46:37 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3
00:46:37 ++ export VIRTUAL_ENV
00:46:37 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:46:37 ++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:46:37 ++ export PATH
00:46:37 ++ '[' -n '' ']'
00:46:37 ++ '[' -z '' ']'
00:46:37 ++ _OLD_VIRTUAL_PS1=
00:46:37 ++ PS1='(.venv3) '
00:46:37 ++ export PS1
00:46:37 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
00:46:37 ++ export VIRTUAL_ENV_PROMPT
00:46:37 ++ hash -r
00:46:37 + pip install -U pip
00:46:37 Requirement already satisfied: pip in ./.venv3/lib64/python3.11/site-packages (22.3.1)
00:46:37 Collecting pip
00:46:37 Using cached pip-26.0.1-py3-none-any.whl (1.8 MB)
00:46:37 Installing collected packages: pip
00:46:37 Attempting uninstall: pip
00:46:37 Found existing installation: pip 22.3.1
00:46:38 Uninstalling pip-22.3.1:
00:46:38 Successfully uninstalled pip-22.3.1
00:46:38 Successfully installed pip-26.0.1
00:46:38 WARNING: There was an error checking the latest version of pip.
00:46:38 + pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl
00:46:39 Collecting zeroc-ice==3.6.5
00:46:39 Downloading https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
00:46:42 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 13.9 MB/s 0:00:02
00:46:42 Installing collected packages: zeroc-ice
00:46:43 Successfully installed zeroc-ice-3.6.5
00:46:43 + pip install markdown
00:46:43 Collecting markdown
00:46:43 Using cached markdown-3.10.2-py3-none-any.whl.metadata (5.1 kB)
00:46:43 Using cached markdown-3.10.2-py3-none-any.whl (108 kB)
00:46:43 Installing collected packages: markdown
00:46:43 Successfully installed markdown-3.10.2
00:46:43 + pip install reportlab
00:46:44 Collecting reportlab
00:46:44 Using cached reportlab-4.4.9-py3-none-any.whl.metadata (1.7 kB)
00:46:44 Collecting pillow>=9.0.0 (from reportlab)
00:46:44 Downloading pillow-12.1.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (8.8 kB)
00:46:44 Collecting charset-normalizer (from reportlab)
00:46:44 Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (37 kB)
00:46:44 Using cached reportlab-4.4.9-py3-none-any.whl (2.0 MB)
00:46:44 Downloading pillow-12.1.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (7.0 MB)
00:46:45 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 7.0/7.0 MB 13.5 MB/s 0:00:00
00:46:45 Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (151 kB)
00:46:45 Installing collected packages: pillow, charset-normalizer, reportlab
00:46:46
00:46:46 Successfully installed charset-normalizer-3.4.4 pillow-12.1.1 reportlab-4.4.9
00:46:46 + pip install omego
00:46:46 Collecting omego
00:46:46 Using cached omego-0.7.0-py3-none-any.whl
00:46:46 Collecting future (from omego)
00:46:46 Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
00:46:46 Collecting yaclifw>=0.1.1 (from omego)
00:46:46 Using cached yaclifw-0.2.0-py3-none-any.whl
00:46:46 Collecting six (from yaclifw>=0.1.1->omego)
00:46:46 Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
00:46:46 Using cached future-1.0.0-py3-none-any.whl (491 kB)
00:46:46 Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
00:46:46 Installing collected packages: six, future, yaclifw, omego
00:46:47
00:46:47 Successfully installed future-1.0.0 omego-0.7.0 six-1.17.0 yaclifw-0.2.0
00:46:47 + pip install tables
00:46:47 Collecting tables
00:46:47 Using cached tables-3.10.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.0 kB)
00:46:47 Collecting numpy>=1.20.0 (from tables)
00:46:47 Using cached numpy-2.4.2-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (6.6 kB)
00:46:47 Collecting numexpr>=2.6.2 (from tables)
00:46:47 Using cached numexpr-2.14.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (9.0 kB)
00:46:48 Collecting packaging (from tables)
00:46:48 Using cached packaging-26.0-py3-none-any.whl.metadata (3.3 kB)
00:46:48 Collecting py-cpuinfo (from tables)
00:46:48 Using cached py_cpuinfo-9.0.0-py3-none-any.whl.metadata (794 bytes)
00:46:48 Collecting blosc2>=2.3.0 (from tables)
00:46:48 Using cached blosc2-4.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (7.6 kB)
00:46:48 Collecting typing-extensions>=4.4.0 (from tables)
00:46:48 Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB)
00:46:48 Collecting ndindex (from blosc2>=2.3.0->tables)
00:46:48 Using cached ndindex-1.10.1-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (3.6 kB)
00:46:48 Collecting msgpack (from blosc2>=2.3.0->tables)
00:46:48 Using cached msgpack-1.1.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (8.1 kB)
00:46:48 Collecting requests (from blosc2>=2.3.0->tables)
00:46:48 Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB)
00:46:48 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->blosc2>=2.3.0->tables) (3.4.4)
00:46:48 Collecting idna<4,>=2.5 (from requests->blosc2>=2.3.0->tables)
00:46:48 Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB)
00:46:48 Collecting urllib3<3,>=1.21.1 (from requests->blosc2>=2.3.0->tables)
00:46:48 Using cached urllib3-2.6.3-py3-none-any.whl.metadata (6.9 kB)
00:46:48 Collecting certifi>=2017.4.17 (from requests->blosc2>=2.3.0->tables)
00:46:48 Using cached certifi-2026.1.4-py3-none-any.whl.metadata (2.5 kB)
00:46:48 Using cached tables-3.10.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (7.5 MB)
00:46:48 Using cached blosc2-4.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (4.7 MB)
00:46:48 Using cached numexpr-2.14.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (442 kB)
00:46:48 Using cached numpy-2.4.2-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.9 MB)
00:46:48 Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB)
00:46:48 Using cached msgpack-1.1.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (426 kB)
00:46:48 Using cached ndindex-1.10.1-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (516 kB)
00:46:48 Using cached packaging-26.0-py3-none-any.whl (74 kB)
00:46:48 Using cached py_cpuinfo-9.0.0-py3-none-any.whl (22 kB)
00:46:48 Using cached requests-2.32.5-py3-none-any.whl (64 kB)
00:46:48 Using cached idna-3.11-py3-none-any.whl (71 kB)
00:46:48 Using cached urllib3-2.6.3-py3-none-any.whl (131 kB)
00:46:48 Using cached certifi-2026.1.4-py3-none-any.whl (152 kB)
00:46:48 Installing collected packages: py-cpuinfo, urllib3, typing-extensions, packaging, numpy, ndindex, msgpack, idna, certifi, requests, numexpr, blosc2, tables
00:46:52
00:46:52 Successfully installed blosc2-4.0.0 certifi-2026.1.4 idna-3.11 msgpack-1.1.2 ndindex-1.10.1 numexpr-2.14.1 numpy-2.4.2 packaging-26.0 py-cpuinfo-9.0.0 requests-2.32.5 tables-3.10.2 typing-extensions-4.15.0 urllib3-2.6.3
00:46:52 + pip install jinja2
00:46:52 Collecting jinja2
00:46:52 Using cached jinja2-3.1.6-py3-none-any.whl.metadata (2.9 kB)
00:46:52 Collecting MarkupSafe>=2.0 (from jinja2)
00:46:52 Using cached markupsafe-3.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.7 kB)
00:46:52 Using cached jinja2-3.1.6-py3-none-any.whl (134 kB)
00:46:52 Using cached markupsafe-3.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (22 kB)
00:46:52 Installing collected packages: MarkupSafe, jinja2
00:46:52
00:46:52 Successfully installed MarkupSafe-3.0.3 jinja2-3.1.6
00:46:52 + pip install omero-py
00:46:53 Collecting omero-py
00:46:53 Using cached omero_py-5.22.0-py3-none-any.whl.metadata (6.5 kB)
00:46:53 Collecting appdirs (from omero-py)
00:46:53 Using cached appdirs-1.4.4-py2.py3-none-any.whl.metadata (9.0 kB)
00:46:53 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py) (1.0.0)
00:46:53 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (2.4.2)
00:46:53 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (12.1.1)
00:46:53 Collecting PyYAML (from omero-py)
00:46:53 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB)
00:46:53 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (3.6.5)
00:46:53 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py) (2.32.5)
00:46:53 Collecting portalocker (from omero-py)
00:46:53 Using cached portalocker-3.2.0-py3-none-any.whl.metadata (8.7 kB)
00:46:53 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (3.4.4)
00:46:53 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (3.11)
00:46:53 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (2.6.3)
00:46:53 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (2026.1.4)
00:46:53 Using cached omero_py-5.22.0-py3-none-any.whl (2.8 MB)
00:46:53 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
00:46:53 Using cached portalocker-3.2.0-py3-none-any.whl (22 kB)
00:46:53 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
00:46:53 Installing collected packages: appdirs, PyYAML, portalocker, omero-py
00:46:55
00:46:55 Successfully installed PyYAML-6.0.3 appdirs-1.4.4 omero-py-5.22.0 portalocker-3.2.0
00:46:55 + pip install pyarrow
00:46:57 Collecting pyarrow
00:46:57 Using cached pyarrow-23.0.0-cp311-cp311-manylinux_2_28_x86_64.whl.metadata (3.0 kB)
00:46:57 Using cached pyarrow-23.0.0-cp311-cp311-manylinux_2_28_x86_64.whl (47.5 MB)
00:46:57 Installing collected packages: pyarrow
00:46:59 Successfully installed pyarrow-23.0.0
00:46:59 + pip install git+https://github.com/snoopycrimecop/omero-metadata.git@merge_ci#egg=omero-metadata
00:46:59 Collecting omero-metadata
00:46:59 Cloning https://github.com/snoopycrimecop/omero-metadata.git (to revision merge_ci) to /tmp/pip-install-t_56scmi/omero-metadata_00ebe48cb5c04ff9ae9bb28e5dcb61dd
00:46:59 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-metadata.git /tmp/pip-install-t_56scmi/omero-metadata_00ebe48cb5c04ff9ae9bb28e5dcb61dd
00:47:00 Resolved https://github.com/snoopycrimecop/omero-metadata.git to commit 33ee661034364a4e09eff8ddede491dab788d7a7
00:47:00 Installing build dependencies: started
00:47:01 Installing build dependencies: finished with status 'done'
00:47:01 Getting requirements to build wheel: started
00:47:01 Getting requirements to build wheel: finished with status 'done'
00:47:01 Preparing metadata (pyproject.toml): started
00:47:01 Preparing metadata (pyproject.toml): finished with status 'done'
00:47:01 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-metadata) (5.22.0)
00:47:01 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-metadata) (6.0.3)
00:47:01 Requirement already satisfied: jinja2 in ./.venv3/lib64/python3.11/site-packages (from omero-metadata) (3.1.6)
00:47:01 Collecting pandas (from omero-metadata)
00:47:01 Using cached pandas-3.0.0-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (79 kB)
00:47:01 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (1.4.4)
00:47:01 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (1.0.0)
00:47:01 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (2.4.2)
00:47:01 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (12.1.1)
00:47:01 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (3.6.5)
00:47:01 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (2.32.5)
00:47:01 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (3.2.0)
00:47:01 Requirement already satisfied: MarkupSafe>=2.0 in ./.venv3/lib64/python3.11/site-packages (from jinja2->omero-metadata) (3.0.3)
00:47:01 Collecting python-dateutil>=2.8.2 (from pandas->omero-metadata)
00:47:01 Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl.metadata (8.4 kB)
00:47:01 Requirement already satisfied: six>=1.5 in ./.venv3/lib64/python3.11/site-packages (from python-dateutil>=2.8.2->pandas->omero-metadata) (1.17.0)
00:47:01 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.4.4)
00:47:01 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.11)
00:47:01 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (2.6.3)
00:47:01 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (2026.1.4)
00:47:01 Using cached pandas-3.0.0-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (11.2 MB)
00:47:01 Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl (229 kB)
00:47:02 Building wheels for collected packages: omero-metadata
00:47:02 Building wheel for omero-metadata (pyproject.toml): started
00:47:02 Building wheel for omero-metadata (pyproject.toml): finished with status 'done'
00:47:02 Created wheel for omero-metadata: filename=omero_metadata-0.13.1.dev0-py3-none-any.whl size=39376 sha256=1258f94a3d5fe5a11ffb9c29ec5bd84c5bb31ae5e5fbe997ae6bfd9ae0a312bb
00:47:02 Stored in directory: /tmp/pip-ephem-wheel-cache-em0lkz1t/wheels/6b/49/26/d56ff0fc3b918823c05ff86cc0686c3a577289ddc39151269b
00:47:02 Successfully built omero-metadata
00:47:02 Installing collected packages: python-dateutil, pandas, omero-metadata
00:47:06
00:47:06 Successfully installed omero-metadata-0.13.1.dev0 pandas-3.0.0 python-dateutil-2.9.0.post0
00:47:06 + pip install git+https://github.com/snoopycrimecop/omero-cli-render.git@merge_ci#egg=omero-cli-render
00:47:07 Collecting omero-cli-render
00:47:07 Cloning https://github.com/snoopycrimecop/omero-cli-render.git (to revision merge_ci) to /tmp/pip-install-173rdwti/omero-cli-render_4bd87ca2f55e4838a082547650ca1802
00:47:07 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-render.git /tmp/pip-install-173rdwti/omero-cli-render_4bd87ca2f55e4838a082547650ca1802
00:47:08 Running command git checkout -b merge_ci --track origin/merge_ci
00:47:08 Switched to a new branch 'merge_ci'
00:47:08 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:47:08 Resolved https://github.com/snoopycrimecop/omero-cli-render.git to commit 3c206456b03f95e615eba6bdbe121ac475095f85
00:47:08 Installing build dependencies: started
00:47:09 Installing build dependencies: finished with status 'done'
00:47:09 Getting requirements to build wheel: started
00:47:09 Getting requirements to build wheel: finished with status 'done'
00:47:09 Preparing metadata (pyproject.toml): started
00:47:09 Preparing metadata (pyproject.toml): finished with status 'done'
00:47:09 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-cli-render) (6.0.3)
00:47:09 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-render) (5.22.0)
00:47:09 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.4.4)
00:47:09 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.0.0)
00:47:09 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (2.4.2)
00:47:09 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (12.1.1)
00:47:09 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (3.6.5)
00:47:09 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (2.32.5)
00:47:09 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (3.2.0)
00:47:09 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.4.4)
00:47:09 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.11)
00:47:09 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (2.6.3)
00:47:09 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (2026.1.4)
00:47:09 Building wheels for collected packages: omero-cli-render
00:47:09 Building wheel for omero-cli-render (pyproject.toml): started
00:47:10 Building wheel for omero-cli-render (pyproject.toml): finished with status 'done'
00:47:10 Created wheel for omero-cli-render: filename=omero_cli_render-0.8.2.dev0-py3-none-any.whl size=19840 sha256=15b655f263498560df6fb4eb85d8c9c8ff4983eee7cdd1c975e6c17a8eb95054
00:47:10 Stored in directory: /tmp/pip-ephem-wheel-cache-aetgvm2c/wheels/cc/67/86/ff54ee10a8ea8ae7a21cceb878741010ef1de4a7d93df129ee
00:47:10 Successfully built omero-cli-render
00:47:10 Installing collected packages: omero-cli-render
00:47:10 Successfully installed omero-cli-render-0.8.2.dev0
00:47:10 + pip install git+https://github.com/snoopycrimecop/omero-cli-duplicate.git@merge_ci#egg=omero-cli-duplicate
00:47:10 Collecting omero-cli-duplicate
00:47:10 Cloning https://github.com/snoopycrimecop/omero-cli-duplicate.git (to revision merge_ci) to /tmp/pip-install-6j9oa4bh/omero-cli-duplicate_d0b8cb0591ba4613802cc7ff0b5863c3
00:47:10 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-duplicate.git /tmp/pip-install-6j9oa4bh/omero-cli-duplicate_d0b8cb0591ba4613802cc7ff0b5863c3
00:47:11 Running command git checkout -b merge_ci --track origin/merge_ci
00:47:11 Switched to a new branch 'merge_ci'
00:47:11 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:47:11 Resolved https://github.com/snoopycrimecop/omero-cli-duplicate.git to commit 249ef023a71a24cdab25ae67a8ca3e73e1954105
00:47:11 Installing build dependencies: started
00:47:12 Installing build dependencies: finished with status 'done'
00:47:12 Getting requirements to build wheel: started
00:47:12 Getting requirements to build wheel: finished with status 'done'
00:47:12 Preparing metadata (pyproject.toml): started
00:47:13 Preparing metadata (pyproject.toml): finished with status 'done'
00:47:13 Requirement already satisfied: omero-py>=5.8 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-duplicate) (5.22.0)
00:47:13 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.4.4)
00:47:13 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.0.0)
00:47:13 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.4.2)
00:47:13 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (12.1.1)
00:47:13 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (6.0.3)
00:47:13 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.6.5)
00:47:13 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.32.5)
00:47:13 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.2.0)
00:47:13 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.4.4)
00:47:13 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.11)
00:47:13 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2.6.3)
00:47:13 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2026.1.4)
00:47:13 Building wheels for collected packages: omero-cli-duplicate
00:47:13 Building wheel for omero-cli-duplicate (pyproject.toml): started
00:47:13 Building wheel for omero-cli-duplicate (pyproject.toml): finished with status 'done'
00:47:13 Created wheel for omero-cli-duplicate: filename=omero_cli_duplicate-0.4.1.dev0-py3-none-any.whl size=11539 sha256=5a8a854f3baccb7befd24eed3241172ec6ad9c86da19023f61c7ecf03e8c3f9b
00:47:13 Stored in directory: /tmp/pip-ephem-wheel-cache-gyglhzkn/wheels/28/e4/77/20667ec1be487a1994d60f59ce11eeba2ac0c8c34aea209b46
00:47:13 Successfully built omero-cli-duplicate
00:47:13 Installing collected packages: omero-cli-duplicate
00:47:13 Successfully installed omero-cli-duplicate-0.4.1.dev0
00:47:13 + pip install git+https://github.com/snoopycrimecop/omero-cli-zarr.git@merge_ci#egg=omero-cli-zarr
00:47:13 Collecting omero-cli-zarr
00:47:13 Cloning https://github.com/snoopycrimecop/omero-cli-zarr.git (to revision merge_ci) to /tmp/pip-install-1fwufm6u/omero-cli-zarr_1b95dee8ae1940a587f88311182fad99
00:47:13 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-zarr.git /tmp/pip-install-1fwufm6u/omero-cli-zarr_1b95dee8ae1940a587f88311182fad99
00:47:14 Running command git checkout -b merge_ci --track origin/merge_ci
00:47:14 Switched to a new branch 'merge_ci'
00:47:14 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:47:14 Resolved https://github.com/snoopycrimecop/omero-cli-zarr.git to commit 6cb5e05d0d1f30362fcf6096ccfe665bd832636d
00:47:14 Installing build dependencies: started
00:47:15 Installing build dependencies: finished with status 'done'
00:47:15 Getting requirements to build wheel: started
00:47:15 Getting requirements to build wheel: finished with status 'done'
00:47:15 Installing backend dependencies: started
00:47:16 Installing backend dependencies: finished with status 'done'
00:47:16 Preparing metadata (pyproject.toml): started
00:47:16 Preparing metadata (pyproject.toml): finished with status 'done'
00:47:16 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-zarr) (5.22.0)
00:47:18 Collecting ome-zarr>=0.12.0 (from omero-cli-zarr)
00:47:18 Using cached ome_zarr-0.13.0-py3-none-any.whl.metadata (2.9 kB)
00:47:18 Requirement already satisfied: numpy in ./.venv3/lib64/python3.11/site-packages (from ome-zarr>=0.12.0->omero-cli-zarr) (2.4.2)
00:47:18 Collecting dask<=2026.1.1,>=2025.12.0 (from ome-zarr>=0.12.0->omero-cli-zarr)
00:47:18 Using cached dask-2026.1.1-py3-none-any.whl.metadata (3.8 kB)
00:47:19 Collecting zarr>=3.0.0 (from ome-zarr>=0.12.0->omero-cli-zarr)
00:47:19 Using cached zarr-3.1.5-py3-none-any.whl.metadata (10 kB)
00:47:19 Collecting fsspec!=2021.07.0,!=2023.9.0,>=0.8 (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:19 Using cached fsspec-2026.2.0-py3-none-any.whl.metadata (10 kB)
00:47:21 Collecting aiohttp (from ome-zarr>=0.12.0->omero-cli-zarr)
00:47:21 Using cached aiohttp-3.13.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (8.1 kB)
00:47:21 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from ome-zarr>=0.12.0->omero-cli-zarr) (2.32.5)
00:47:21 Collecting scikit-image>=0.19.0 (from ome-zarr>=0.12.0->omero-cli-zarr)
00:47:21 Using cached scikit_image-0.26.0-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (15 kB)
00:47:21 Collecting toolz (from ome-zarr>=0.12.0->omero-cli-zarr)
00:47:21 Using cached toolz-1.1.0-py3-none-any.whl.metadata (5.1 kB)
00:47:21 Collecting rangehttpserver (from ome-zarr>=0.12.0->omero-cli-zarr)
00:47:21 Using cached rangehttpserver-1.4.0-py2.py3-none-any.whl.metadata (769 bytes)
00:47:21 Collecting click>=8.1 (from dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:21 Using cached click-8.3.1-py3-none-any.whl.metadata (2.6 kB)
00:47:21 Collecting cloudpickle>=3.0.0 (from dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:21 Using cached cloudpickle-3.1.2-py3-none-any.whl.metadata (7.1 kB)
00:47:21 Requirement already satisfied: packaging>=20.0 in ./.venv3/lib64/python3.11/site-packages (from dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.12.0->omero-cli-zarr) (26.0)
00:47:21 Collecting partd>=1.4.0 (from dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:21 Using cached partd-1.4.2-py3-none-any.whl.metadata (4.6 kB)
00:47:21 Requirement already satisfied: pyyaml>=5.3.1 in ./.venv3/lib64/python3.11/site-packages (from dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.12.0->omero-cli-zarr) (6.0.3)
00:47:21 Collecting importlib_metadata>=4.13.0 (from dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:21 Using cached importlib_metadata-8.7.1-py3-none-any.whl.metadata (4.7 kB)
00:47:21 Collecting s3fs>2024.2.0 (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:21 Using cached s3fs-2026.2.0-py3-none-any.whl.metadata (1.2 kB)
00:47:21 Collecting zipp>=3.20 (from importlib_metadata>=4.13.0->dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:21 Using cached zipp-3.23.0-py3-none-any.whl.metadata (3.6 kB)
00:47:21 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (1.4.4)
00:47:21 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (1.0.0)
00:47:21 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (12.1.1)
00:47:21 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (3.6.5)
00:47:21 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (3.2.0)
00:47:21 Collecting locket (from partd>=1.4.0->dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:21 Using cached locket-1.0.0-py2.py3-none-any.whl.metadata (2.8 kB)
00:47:21 Collecting aiobotocore<4.0.0,>=2.19.0 (from s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:21 Using cached aiobotocore-3.1.2-py3-none-any.whl.metadata (26 kB)
00:47:21 Collecting aioitertools<1.0.0,>=0.5.1 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:21 Using cached aioitertools-0.13.0-py3-none-any.whl.metadata (3.3 kB)
00:47:21 Collecting botocore<1.42.43,>=1.41.0 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:21 Using cached botocore-1.42.42-py3-none-any.whl.metadata (5.9 kB)
00:47:21 Requirement already satisfied: python-dateutil<3.0.0,>=2.1 in ./.venv3/lib64/python3.11/site-packages (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.12.0->omero-cli-zarr) (2.9.0.post0)
00:47:21 Collecting jmespath<2.0.0,>=0.7.1 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:21 Using cached jmespath-1.1.0-py3-none-any.whl.metadata (7.6 kB)
00:47:22 Collecting multidict<7.0.0,>=6.0.0 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:22 Using cached multidict-6.7.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (5.3 kB)
00:47:22 Collecting wrapt<3.0.0,>=1.10.10 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:22 Using cached wrapt-2.1.1-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl.metadata (7.4 kB)
00:47:22 Collecting aiohappyeyeballs>=2.5.0 (from aiohttp->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:22 Using cached aiohappyeyeballs-2.6.1-py3-none-any.whl.metadata (5.9 kB)
00:47:22 Collecting aiosignal>=1.4.0 (from aiohttp->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:22 Using cached aiosignal-1.4.0-py3-none-any.whl.metadata (3.7 kB)
00:47:22 Collecting attrs>=17.3.0 (from aiohttp->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:22 Using cached attrs-25.4.0-py3-none-any.whl.metadata (10 kB)
00:47:22 Collecting frozenlist>=1.1.1 (from aiohttp->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:22 Using cached frozenlist-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl.metadata (20 kB)
00:47:22 Collecting propcache>=0.2.0 (from aiohttp->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:22 Using cached propcache-0.4.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (13 kB)
00:47:22 Collecting yarl<2.0,>=1.17.0 (from aiohttp->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:22 Using cached yarl-1.22.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (75 kB)
00:47:22 Requirement already satisfied: urllib3!=2.2.0,<3,>=1.25.4 in ./.venv3/lib64/python3.11/site-packages (from botocore<1.42.43,>=1.41.0->aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.12.0->omero-cli-zarr) (2.6.3)
00:47:22 Requirement already satisfied: six>=1.5 in ./.venv3/lib64/python3.11/site-packages (from python-dateutil<3.0.0,>=2.1->aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.12.0->omero-cli-zarr) (1.17.0)
00:47:22 Requirement already satisfied: idna>=2.0 in ./.venv3/lib64/python3.11/site-packages (from yarl<2.0,>=1.17.0->aiohttp->ome-zarr>=0.12.0->omero-cli-zarr) (3.11)
00:47:22 Requirement already satisfied: typing-extensions>=4.2 in ./.venv3/lib64/python3.11/site-packages (from aiosignal>=1.4.0->aiohttp->ome-zarr>=0.12.0->omero-cli-zarr) (4.15.0)
00:47:23 Collecting scipy>=1.11.4 (from scikit-image>=0.19.0->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:23 Using cached scipy-1.17.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (62 kB)
00:47:23 Collecting networkx>=3.0 (from scikit-image>=0.19.0->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:23 Using cached networkx-3.6.1-py3-none-any.whl.metadata (6.8 kB)
00:47:23 Collecting imageio!=2.35.0,>=2.33 (from scikit-image>=0.19.0->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:23 Using cached imageio-2.37.2-py3-none-any.whl.metadata (9.7 kB)
00:47:23 Collecting tifffile>=2022.8.12 (from scikit-image>=0.19.0->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:23 Using cached tifffile-2026.1.28-py3-none-any.whl.metadata (30 kB)
00:47:23 Collecting lazy-loader>=0.4 (from scikit-image>=0.19.0->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:23 Using cached lazy_loader-0.4-py3-none-any.whl.metadata (7.6 kB)
00:47:23 Collecting donfig>=0.8 (from zarr>=3.0.0->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:23 Using cached donfig-0.8.1.post1-py3-none-any.whl.metadata (5.0 kB)
00:47:23 Collecting google-crc32c>=1.5 (from zarr>=3.0.0->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:23 Using cached google_crc32c-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_5_x86_64.whl.metadata (1.7 kB)
00:47:23 Collecting numcodecs>=0.14 (from zarr>=3.0.0->ome-zarr>=0.12.0->omero-cli-zarr)
00:47:23 Using cached numcodecs-0.16.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (3.4 kB)
00:47:23 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->ome-zarr>=0.12.0->omero-cli-zarr) (3.4.4)
00:47:23 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->ome-zarr>=0.12.0->omero-cli-zarr) (2026.1.4)
00:47:23 Using cached ome_zarr-0.13.0-py3-none-any.whl (42 kB)
00:47:23 Using cached dask-2026.1.1-py3-none-any.whl (1.5 MB)
00:47:23 Using cached click-8.3.1-py3-none-any.whl (108 kB)
00:47:23 Using cached cloudpickle-3.1.2-py3-none-any.whl (22 kB)
00:47:23 Using cached fsspec-2026.2.0-py3-none-any.whl (202 kB)
00:47:23 Using cached importlib_metadata-8.7.1-py3-none-any.whl (27 kB)
00:47:23 Using cached partd-1.4.2-py3-none-any.whl (18 kB)
00:47:23 Using cached s3fs-2026.2.0-py3-none-any.whl (31 kB)
00:47:23 Using cached aiobotocore-3.1.2-py3-none-any.whl (87 kB)
00:47:23 Using cached aiohttp-3.13.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (1.7 MB)
00:47:23 Using cached aioitertools-0.13.0-py3-none-any.whl (24 kB)
00:47:23 Using cached botocore-1.42.42-py3-none-any.whl (14.6 MB)
00:47:23 Using cached jmespath-1.1.0-py3-none-any.whl (20 kB)
00:47:23 Using cached multidict-6.7.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (246 kB)
00:47:23 Using cached wrapt-2.1.1-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl (113 kB)
00:47:23 Using cached yarl-1.22.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (365 kB)
00:47:23 Using cached aiohappyeyeballs-2.6.1-py3-none-any.whl (15 kB)
00:47:23 Using cached aiosignal-1.4.0-py3-none-any.whl (7.5 kB)
00:47:23 Using cached attrs-25.4.0-py3-none-any.whl (67 kB)
00:47:23 Using cached frozenlist-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl (231 kB)
00:47:23 Using cached propcache-0.4.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (210 kB)
00:47:23 Using cached scikit_image-0.26.0-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (13.7 MB)
00:47:23 Using cached imageio-2.37.2-py3-none-any.whl (317 kB)
00:47:23 Using cached lazy_loader-0.4-py3-none-any.whl (12 kB)
00:47:23 Using cached networkx-3.6.1-py3-none-any.whl (2.1 MB)
00:47:23 Using cached scipy-1.17.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (35.1 MB)
00:47:23 Using cached tifffile-2026.1.28-py3-none-any.whl (233 kB)
00:47:23 Using cached toolz-1.1.0-py3-none-any.whl (58 kB)
00:47:23 Using cached zarr-3.1.5-py3-none-any.whl (284 kB)
00:47:23 Using cached donfig-0.8.1.post1-py3-none-any.whl (21 kB)
00:47:23 Using cached google_crc32c-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_5_x86_64.whl (33 kB)
00:47:23 Using cached numcodecs-0.16.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (9.1 MB)
00:47:23 Using cached zipp-3.23.0-py3-none-any.whl (10 kB)
00:47:23 Using cached locket-1.0.0-py2.py3-none-any.whl (4.4 kB)
00:47:23 Using cached rangehttpserver-1.4.0-py2.py3-none-any.whl (7.8 kB)
00:47:23 Building wheels for collected packages: omero-cli-zarr
00:47:23 Building wheel for omero-cli-zarr (pyproject.toml): started
00:47:24 Building wheel for omero-cli-zarr (pyproject.toml): finished with status 'done'
00:47:24 Created wheel for omero-cli-zarr: filename=omero_cli_zarr-0.5.5.dev152+g6cb5e05-py3-none-any.whl size=38158 sha256=dad31b6423b009ec5ad57f92a1a56293049f901acc67af1b7c880dda2a72a1c8
00:47:24 Stored in directory: /tmp/pip-ephem-wheel-cache-h2_noxw0/wheels/23/9b/a6/58188c5a16d0876457bd9f2c6a2fb9759c671db67032a0e529
00:47:24 Successfully built omero-cli-zarr
00:47:24 Installing collected packages: rangehttpserver, zipp, wrapt, toolz, tifffile, scipy, propcache, numcodecs, networkx, multidict, locket, lazy-loader, jmespath, imageio, google-crc32c, fsspec, frozenlist, donfig, cloudpickle, click, attrs, aioitertools, aiohappyeyeballs, zarr, yarl, scikit-image, partd, importlib_metadata, botocore, aiosignal, dask, aiohttp, aiobotocore, s3fs, ome-zarr, omero-cli-zarr
00:47:33
00:47:33 Successfully installed aiobotocore-3.1.2 aiohappyeyeballs-2.6.1 aiohttp-3.13.3 aioitertools-0.13.0 aiosignal-1.4.0 attrs-25.4.0 botocore-1.42.42 click-8.3.1 cloudpickle-3.1.2 dask-2026.1.1 donfig-0.8.1.post1 frozenlist-1.8.0 fsspec-2026.2.0 google-crc32c-1.8.0 imageio-2.37.2 importlib_metadata-8.7.1 jmespath-1.1.0 lazy-loader-0.4 locket-1.0.0 multidict-6.7.1 networkx-3.6.1 numcodecs-0.16.5 ome-zarr-0.13.0 omero-cli-zarr-0.5.5.dev152+g6cb5e05 partd-1.4.2 propcache-0.4.1 rangehttpserver-1.4.0 s3fs-2026.2.0 scikit-image-0.26.0 scipy-1.17.0 tifffile-2026.1.28 toolz-1.1.0 wrapt-2.1.1 yarl-1.22.0 zarr-3.1.5 zipp-3.23.0
00:47:33 + pip install omero-certificates
00:47:34 Collecting omero-certificates
00:47:34 Using cached omero_certificates-0.4.0-py3-none-any.whl.metadata (3.3 kB)
00:47:34 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-certificates) (5.22.0)
00:47:34 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (1.4.4)
00:47:34 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (1.0.0)
00:47:34 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (2.4.2)
00:47:34 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (12.1.1)
00:47:34 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (6.0.3)
00:47:34 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (3.6.5)
00:47:34 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (2.32.5)
00:47:34 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (3.2.0)
00:47:34 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.4.4)
00:47:34 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.11)
00:47:34 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2.6.3)
00:47:34 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2026.1.4)
00:47:34 Using cached omero_certificates-0.4.0-py3-none-any.whl (11 kB)
00:47:34 Installing collected packages: omero-certificates
00:47:34 Successfully installed omero-certificates-0.4.0
00:47:34 + for x in *.tar.gz
00:47:34 + pip install -U omero_dropbox-5.7.1.dev0.tar.gz
00:47:34 Processing ./omero_dropbox-5.7.1.dev0.tar.gz
00:47:34 Installing build dependencies: started
00:47:35 Installing build dependencies: finished with status 'done'
00:47:35 Getting requirements to build wheel: started
00:47:36 Getting requirements to build wheel: finished with status 'done'
00:47:36 Preparing metadata (pyproject.toml): started
00:47:36 Preparing metadata (pyproject.toml): finished with status 'done'
00:47:36 Requirement already satisfied: omero-py in ./.venv3/lib64/python3.11/site-packages (from omero-dropbox==5.7.1.dev0) (5.22.0)
00:47:36 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.4.4)
00:47:36 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.0.0)
00:47:36 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.4.2)
00:47:36 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (12.1.1)
00:47:36 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (6.0.3)
00:47:36 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5)
00:47:36 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.32.5)
00:47:36 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.2.0)
00:47:36 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.4.4)
00:47:36 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.11)
00:47:36 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2.6.3)
00:47:36 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2026.1.4)
00:47:36 Building wheels for collected packages: omero-dropbox
00:47:36 Building wheel for omero-dropbox (pyproject.toml): started
00:47:36 Building wheel for omero-dropbox (pyproject.toml): finished with status 'done'
00:47:36 Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49138 sha256=32fc047d5bf58b6ad389c53b4c207cdfa2af4d00d3f3c22c6086d14c4380a342
00:47:36 Stored in directory: /home/omero/.cache/pip/wheels/97/54/5f/8dccf5c24b891c9bef25978dac72ee622eda35946855e06c92
00:47:36 Successfully built omero-dropbox
00:47:36 Installing collected packages: omero-dropbox
00:47:36 Successfully installed omero-dropbox-5.7.1.dev0
00:47:36 + for x in *.tar.gz
00:47:36 + pip install -U omero_marshal-0.9.2.dev0.tar.gz
00:47:36 Processing ./omero_marshal-0.9.2.dev0.tar.gz
00:47:37 Installing build dependencies: started
00:47:37 Installing build dependencies: finished with status 'done'
00:47:37 Getting requirements to build wheel: started
00:47:38 Getting requirements to build wheel: finished with status 'done'
00:47:38 Preparing metadata (pyproject.toml): started
00:47:38 Preparing metadata (pyproject.toml): finished with status 'done'
00:47:38 Building wheels for collected packages: omero_marshal
00:47:38 Building wheel for omero_marshal (pyproject.toml): started
00:47:38 Building wheel for omero_marshal (pyproject.toml): finished with status 'done'
00:47:38 Created wheel for omero_marshal: filename=omero_marshal-0.9.2.dev0-py3-none-any.whl size=88131 sha256=c0b626921ba64bccb0bafcca8c8d5ba2c2c3965004f32ec012732123516fa5aa
00:47:38 Stored in directory: /home/omero/.cache/pip/wheels/38/19/f8/b7cbc5aa44dc10bd3c24777f40a22cf6ed1baeac622bbf8230
00:47:38 Successfully built omero_marshal
00:47:38 Installing collected packages: omero_marshal
00:47:38 Successfully installed omero_marshal-0.9.2.dev0
00:47:38 + for x in *.tar.gz
00:47:38 + pip install -U omero_py-5.22.1.dev0.tar.gz
00:47:39 Processing ./omero_py-5.22.1.dev0.tar.gz
00:47:39 Installing build dependencies: started
00:47:40 Installing build dependencies: finished with status 'done'
00:47:40 Getting requirements to build wheel: started
00:47:40 Getting requirements to build wheel: finished with status 'done'
00:47:40 Preparing metadata (pyproject.toml): started
00:47:40 Preparing metadata (pyproject.toml): finished with status 'done'
00:47:40 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.1.dev0) (1.4.4)
00:47:40 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.1.dev0) (1.0.0)
00:47:40 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.1.dev0) (2.4.2)
00:47:40 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.1.dev0) (12.1.1)
00:47:40 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.1.dev0) (6.0.3)
00:47:40 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.1.dev0) (3.6.5)
00:47:40 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.1.dev0) (2.32.5)
00:47:40 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.1.dev0) (3.2.0)
00:47:40 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.1.dev0) (3.4.4)
00:47:40 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.1.dev0) (3.11)
00:47:40 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.1.dev0) (2.6.3)
00:47:40 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.1.dev0) (2026.1.4)
00:47:40 Building wheels for collected packages: omero-py
00:47:40 Building wheel for omero-py (pyproject.toml): started
00:47:41 Building wheel for omero-py (pyproject.toml): finished with status 'done'
00:47:41 Created wheel for omero-py: filename=omero_py-5.22.1.dev0-py3-none-any.whl size=2786544 sha256=630c2dc604d137f842357a28634f0c4205fb80d9760b0af15d69c7f2a1af05fc
00:47:41 Stored in directory: /home/omero/.cache/pip/wheels/e5/0d/4a/1d505358a194b66ce24f7dc55acc515e437e72953730429407
00:47:41 Successfully built omero-py
00:47:41 Installing collected packages: omero-py
00:47:41 Attempting uninstall: omero-py
00:47:41 Found existing installation: omero-py 5.22.0
00:47:41 Uninstalling omero-py-5.22.0:
00:47:42 Successfully uninstalled omero-py-5.22.0
00:47:44 Successfully installed omero-py-5.22.1.dev0
00:47:44 + for x in *.tar.gz
00:47:44 + pip install -U omero_scripts-5.10.1.dev0.tar.gz
00:47:44 Processing ./omero_scripts-5.10.1.dev0.tar.gz
00:47:44 Installing build dependencies: started
00:47:45 Installing build dependencies: finished with status 'done'
00:47:45 Getting requirements to build wheel: started
00:47:45 Getting requirements to build wheel: finished with status 'done'
00:47:45 Preparing metadata (pyproject.toml): started
00:47:45 Preparing metadata (pyproject.toml): finished with status 'done'
00:47:45 Building wheels for collected packages: omero-scripts
00:47:45 Building wheel for omero-scripts (pyproject.toml): started
00:47:46 Building wheel for omero-scripts (pyproject.toml): finished with status 'done'
00:47:46 Created wheel for omero-scripts: filename=omero_scripts-5.10.1.dev0-py3-none-any.whl size=137002 sha256=ce123124c50babda0e701c87710fd1fd68ca4241e168eb11691641e3dd622ae2
00:47:46 Stored in directory: /home/omero/.cache/pip/wheels/42/27/9e/76575465f2b255db596bcfcfc1a50c113f5603b7dc93ec491e
00:47:46 Successfully built omero-scripts
00:47:46 Installing collected packages: omero-scripts
00:47:46 Successfully installed omero-scripts-5.10.1.dev0
00:47:46 + for x in *.tar.gz
00:47:46 + pip install -U omero_web-5.30.2.dev0.tar.gz
00:47:46 Processing ./omero_web-5.30.2.dev0.tar.gz
00:47:47 Installing build dependencies: started
00:47:47 Installing build dependencies: finished with status 'done'
00:47:47 Getting requirements to build wheel: started
00:47:48 Getting requirements to build wheel: finished with status 'done'
00:47:48 Preparing metadata (pyproject.toml): started
00:47:48 Preparing metadata (pyproject.toml): finished with status 'done'
00:47:48 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (5.22.1.dev0)
00:47:48 Collecting concurrent-log-handler>=0.9.20 (from omero-web==5.30.2.dev0)
00:47:48 Using cached concurrent_log_handler-0.9.28-py3-none-any.whl.metadata (23 kB)
00:47:48 Collecting Django<5.3,>=5.2.9 (from omero-web==5.30.2.dev0)
00:47:48 Using cached django-5.2.11-py3-none-any.whl.metadata (4.1 kB)
00:47:48 Collecting django-pipeline>=4.1.0 (from omero-web==5.30.2.dev0)
00:47:48 Using cached django_pipeline-4.1.0-py3-none-any.whl.metadata (5.9 kB)
00:47:48 Collecting django-cors-headers==3.7.0 (from omero-web==5.30.2.dev0)
00:47:48 Using cached django_cors_headers-3.7.0-py3-none-any.whl.metadata (15 kB)
00:47:48 Collecting whitenoise>=5.3.0 (from omero-web==5.30.2.dev0)
00:47:48 Using cached whitenoise-6.11.0-py3-none-any.whl.metadata (3.7 kB)
00:47:48 Collecting gunicorn>=19.3 (from omero-web==5.30.2.dev0)
00:47:48 Using cached gunicorn-25.0.3-py3-none-any.whl.metadata (5.5 kB)
00:47:48 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (0.9.2.dev0)
00:47:48 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (12.1.1)
00:47:48 Collecting pytz (from omero-web==5.30.2.dev0)
00:47:48 Using cached pytz-2025.2-py2.py3-none-any.whl.metadata (22 kB)
00:47:48 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (3.2.0)
00:47:48 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (26.0)
00:47:48 Collecting importlib-resources (from omero-web==5.30.2.dev0)
00:47:48 Using cached importlib_resources-6.5.2-py3-none-any.whl.metadata (3.9 kB)
00:47:48 Collecting asgiref>=3.8.1 (from Django<5.3,>=5.2.9->omero-web==5.30.2.dev0)
00:47:48 Using cached asgiref-3.11.1-py3-none-any.whl.metadata (9.3 kB)
00:47:48 Collecting sqlparse>=0.3.1 (from Django<5.3,>=5.2.9->omero-web==5.30.2.dev0)
00:47:48 Using cached sqlparse-0.5.5-py3-none-any.whl.metadata (4.7 kB)
00:47:48 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web==5.30.2.dev0) (65.5.1)
00:47:48 Collecting wheel (from django-pipeline>=4.1.0->omero-web==5.30.2.dev0)
00:47:48 Using cached wheel-0.46.3-py3-none-any.whl.metadata (2.4 kB)
00:47:48 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (1.4.4)
00:47:48 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (1.0.0)
00:47:48 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (2.4.2)
00:47:48 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (6.0.3)
00:47:48 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (3.6.5)
00:47:48 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (2.32.5)
00:47:48 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.30.2.dev0) (3.4.4)
00:47:48 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.30.2.dev0) (3.11)
00:47:48 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.30.2.dev0) (2.6.3)
00:47:48 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.30.2.dev0) (2026.1.4)
00:47:49 Using cached django_cors_headers-3.7.0-py3-none-any.whl (12 kB)
00:47:49 Using cached django-5.2.11-py3-none-any.whl (8.3 MB)
00:47:49 Using cached asgiref-3.11.1-py3-none-any.whl (24 kB)
00:47:49 Using cached concurrent_log_handler-0.9.28-py3-none-any.whl (28 kB)
00:47:49 Using cached django_pipeline-4.1.0-py3-none-any.whl (75 kB)
00:47:49 Using cached gunicorn-25.0.3-py3-none-any.whl (171 kB)
00:47:49 Using cached sqlparse-0.5.5-py3-none-any.whl (46 kB)
00:47:49 Using cached whitenoise-6.11.0-py3-none-any.whl (20 kB)
00:47:49 Using cached importlib_resources-6.5.2-py3-none-any.whl (37 kB)
00:47:49 Using cached pytz-2025.2-py2.py3-none-any.whl (509 kB)
00:47:49 Using cached wheel-0.46.3-py3-none-any.whl (30 kB)
00:47:49 Building wheels for collected packages: omero-web
00:47:49 Building wheel for omero-web (pyproject.toml): started
00:47:50 Building wheel for omero-web (pyproject.toml): finished with status 'done'
00:47:50 Created wheel for omero-web: filename=omero_web-5.30.2.dev0-py3-none-any.whl size=2819268 sha256=d58cf56de9ed7df00fe4914139120d2d97d83fa9fecebc8b1e9c366c141dd37b
00:47:50 Stored in directory: /home/omero/.cache/pip/wheels/22/8a/f9/2aa2b64b8351936989ad8693ee70db658c8360167f1ee574e7
00:47:50 Successfully built omero-web
00:47:50 Installing collected packages: pytz, whitenoise, wheel, sqlparse, importlib-resources, gunicorn, concurrent-log-handler, asgiref, django-pipeline, Django, django-cors-headers, omero-web
00:47:53
00:47:53 Successfully installed Django-5.2.11 asgiref-3.11.1 concurrent-log-handler-0.9.28 django-cors-headers-3.7.0 django-pipeline-4.1.0 gunicorn-25.0.3 importlib-resources-6.5.2 omero-web-5.30.2.dev0 pytz-2025.2 sqlparse-0.5.5 wheel-0.46.3 whitenoise-6.11.0
00:47:53 + wget https://raw.githubusercontent.com/snoopycrimecop/omero-figure/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
00:47:53 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:47:53 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:47:53 --2026-02-12 00:47:53-- https://raw.githubusercontent.com/snoopycrimecop/omero-figure/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
00:47:53 Resolving raw.githubusercontent.com (raw.githubusercontent.com)... 185.199.111.133, 185.199.110.133, 185.199.108.133, ...
00:47:53 Connecting to raw.githubusercontent.com (raw.githubusercontent.com)|185.199.111.133|:443... connected.
00:47:53 HTTP request sent, awaiting response... 200 OK
00:47:53 Length: 137709 (134K) [text/plain]
00:47:53 Saving to: ‘Figure_To_Pdf.py’
00:47:53
00:47:53 0K .......... .......... .......... .......... .......... 37% 4.53M 0s
00:47:53 50K .......... .......... .......... .......... .......... 74% 4.84M 0s
00:47:53 100K .......... .......... .......... .... 100% 26.7M=0.02s
00:47:53
00:47:53 2026-02-12 00:47:53 (5.94 MB/s) - ‘Figure_To_Pdf.py’ saved [137709/137709]
00:47:53
00:47:53 + chmod 755 Figure_To_Pdf.py
00:47:53 + mv Figure_To_Pdf.py /home/omero/workspace/OMERO-server/OMERO.server/lib/scripts/omero/figure_scripts
00:47:53 + omero config set omero.db.name OMERO-server
00:47:55 + omero config set omero.db.host pg
00:47:57 + omero config set omero.db.user postgres
00:47:59 + omero config set omero.data.dir /home/omero/omero-server-data
00:48:01 + omero config set omero.fs.repo.path %user%_%userId%/%thread%//%year%-%month%/%day%/%time%
00:48:03 + omero config set omero.db.poolsize 25
00:48:05 + omero config set omero.security.trustStore /etc/pki/ca-trust/extracted/java/cacerts
00:48:07 + omero config set omero.security.trustStorePassword changeit
00:48:09 + omero config set omero.mail.config true
00:48:11 + omero config set omero.server.nodedescriptors master:Blitz-0,Indexer-0,Processor-0,Storm,Tables-0
00:48:13 + omero config set omero.jvmcfg.append '--add-opens java.base/java.lang=ALL-UNNAMED --add-exports java.naming/com.sun.jndi.ldap=ALL-UNNAMED'
00:48:15 + omero certificates
00:48:17 OpenSSL 3.5.1 1 Jul 2025 (Library: OpenSSL 3.5.1 1 Jul 2025)
00:48:17 certificates created: /home/omero/omero-server-data/certs/server.pem /home/omero/omero-server-data/certs/server.p12
00:48:17 + '[' false = true ']'
00:48:17 + echo 'Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade'
00:48:17 Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade
00:48:17 + omego db -vvv upgrade --serverdir /home/omero/workspace/OMERO-server/OMERO.server --dbname OMERO-server
00:48:17 2026-02-12 00:48:17,706 [ omego.db] DEBUG dbcommand => upgrade
00:48:17 2026-02-12 00:48:17,706 [ omego.db] DEBUG dbhost => localhost
00:48:17 2026-02-12 00:48:17,706 [ omego.db] DEBUG dbname => OMERO-server
00:48:17 2026-02-12 00:48:17,706 [ omego.db] DEBUG dbpass => omero
00:48:17 2026-02-12 00:48:17,706 [ omego.db] DEBUG dbuser => omero
00:48:17 2026-02-12 00:48:17,706 [ omego.db] DEBUG rootpass => omero
00:48:17 2026-02-12 00:48:17,706 [ omego.db] DEBUG serverdir => /home/omero/workspace/OMERO-server/OMERO.server
00:48:17 2026-02-12 00:48:17,706 [omego.extern] INFO Executing : omero version
00:48:19 OMERO.py version:
00:48:19 OMERO.server version:
00:48:19 5.6.3-593-9f51ea8b1b-ice36-b51
00:48:19 5.22.1.dev0
00:48:19 2026-02-12 00:48:19,705 [omego.extern] INFO Completed [1.999 s]
00:48:19 2026-02-12 00:48:19,705 [omego.extern] DEBUG Using omero CLI from omero
00:48:19 2026-02-12 00:48:19,705 [ omego.db] INFO DbAdmin: DbAdmin /home/omero/workspace/OMERO-server/OMERO.server ...
00:48:19 2026-02-12 00:48:19,705 [omego.extern] INFO Running [current environment]: omero config get --show-password
00:48:19 2026-02-12 00:48:19,705 [omego.extern] INFO Executing : omero config get --show-password
00:48:21 2026-02-12 00:48:21,643 [omego.extern] INFO Completed [1.937 s]
00:48:21 2026-02-12 00:48:21,643 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero
00:48:21 2026-02-12 00:48:21,643 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t --version
00:48:21 2026-02-12 00:48:21,649 [omego.extern] INFO Completed [0.006 s]
00:48:21 2026-02-12 00:48:21,649 [ omego.db] DEBUG stdout: b'psql (PostgreSQL) 16.11\n'
00:48:21 2026-02-12 00:48:21,649 [ omego.db] INFO psql version: psql (PostgreSQL) 16.11
00:48:21
00:48:21 2026-02-12 00:48:21,649 [omego.extern] INFO Running [current environment]: omero config get --show-password
00:48:21 2026-02-12 00:48:21,649 [omego.extern] INFO Executing : omero config get --show-password
00:48:23 2026-02-12 00:48:23,582 [omego.extern] INFO Completed [1.933 s]
00:48:23 2026-02-12 00:48:23,582 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero
00:48:23 2026-02-12 00:48:23,582 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c \conninfo
00:48:23 2026-02-12 00:48:23,591 [omego.extern] INFO Completed [0.009 s]
00:48:23 2026-02-12 00:48:23,591 [ omego.db] DEBUG stdout: b'You are connected to database "OMERO-server" as user "postgres" on host "pg" (address "172.18.0.9") at port "5432".\n'
00:48:23 2026-02-12 00:48:23,591 [ omego.db] DEBUG Executing query: SELECT currentversion, currentpatch FROM dbpatch ORDER BY id DESC LIMIT 1
00:48:23 2026-02-12 00:48:23,591 [omego.extern] INFO Running [current environment]: omero config get --show-password
00:48:23 2026-02-12 00:48:23,591 [omego.extern] INFO Executing : omero config get --show-password
00:48:25 2026-02-12 00:48:25,549 [omego.extern] INFO Completed [1.958 s]
00:48:25 2026-02-12 00:48:25,550 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero
00:48:25 2026-02-12 00:48:25,550 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c SELECT currentversion, currentpatch FROM dbpatch ORDER BY id DESC LIMIT 1
00:48:25 2026-02-12 00:48:25,559 [omego.extern] INFO Completed [0.010 s]
00:48:25 2026-02-12 00:48:25,560 [ omego.db] DEBUG stdout: b'OMERO5.4|0\n'
00:48:25 2026-02-12 00:48:25,560 [ omego.db] INFO Current omero db version: ('OMERO5.4', '0')
00:48:25 2026-02-12 00:48:25,561 [ omego.db] INFO Database is already at OMERO5.4__0
00:48:25 + export LANG=en_US.UTF-8
00:48:25 + LANG=en_US.UTF-8
00:48:25 + export LANGUAGE=en_US:en
00:48:25 + LANGUAGE=en_US:en
00:48:25 + export LC_ALL=en_US.UTF-8
00:48:25 + LC_ALL=en_US.UTF-8
00:48:25 + BUILD_ID=DONT_KILL_ME
00:48:25 + omero admin start
00:48:30 No descriptor given. Using etc/grid/default.xml
00:48:38 Creating /home/omero/workspace/OMERO-server/OMERO.server/var/master
00:48:38 Initializing /home/omero/workspace/OMERO-server/OMERO.server/var/log
00:48:38 Creating /home/omero/workspace/OMERO-server/OMERO.server/var/registry
00:48:38 Waiting on startup. Use CTRL-C to exit
00:48:38 + omero admin waitup
00:48:40 Waiting on startup. Use CTRL-C to exit
00:48:40 + omero admin diagnostics
00:48:42
00:48:42 ================================================================================
00:48:42 OMERO Diagnostics (admin)
00:48:42 ================================================================================
00:48:42
00:48:42 Commands: java -version 17.0.17 (/usr/bin/java)
00:48:42 Commands: python -V 3.11.13 (/home/omero/workspace/OMERO-server/.venv3/bin/python)
00:48:42 Commands: icegridnode --version 3.6.5 (/opt/ice-3.6.5/bin/icegridnode)
00:48:42 Commands: icegridadmin --version 3.6.5 (/opt/ice-3.6.5/bin/icegridadmin)
00:48:42 Commands: psql --version 16.11 (/usr/bin/psql)
00:48:42 Commands: openssl version 3.5.11 (/usr/bin/openssl)
00:48:42
00:48:42 Component: OMERO.py 5.22.1.dev0
00:48:42 Component: OMERO.server 5.6.3-593-9f51ea8b1b-ice36-b51
00:48:42
00:48:42 Server: icegridnode running
00:48:42 Server: Blitz-0 active (pid = 17682, enabled)
00:48:42 Server: Indexer-0 activating (enabled)
00:48:42 Server: OMERO.Glacier2 active (pid = 17715, enabled)
00:48:42 Server: OMERO.IceStorm active (pid = 17742, enabled)
00:48:42 Server: Processor-0 active (pid = 17731, enabled)
00:48:42 Server: Tables-0 active (pid = 17743, enabled)
00:48:42
00:48:42 Log dir: /home/omero/workspace/OMERO-server/OMERO.server/var/log exists
00:48:42 Log files: Blitz-0.log 30.5 KB errors=0 warnings=1
00:48:42 Log files: DropBox.log n/a
00:48:42 Log files: FileServer.log n/a
00:48:42 Log files: Indexer-0.log 358 B
00:48:42 Log files: MonitorServer.log n/a
00:48:42 Log files: Processor-0.log 735 B
00:48:42 Log files: Tables-0.log 961 B
00:48:42 Log files: TestDropBox.log n/a
00:48:42 Log files: master.err empty
00:48:42 Log files: master.out 30.1 KB
00:48:42 Log files: Total size 0.06 MB
00:48:42
00:48:42
00:48:42 Environment:OMERO_HOME=(unset)
00:48:42 Environment:OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
00:48:42 Environment:OMERO_NODE=(unset)
00:48:42 Environment:OMERO_MASTER=(unset)
00:48:42 Environment:OMERO_USERDIR=(unset)
00:48:42 Environment:OMERO_TMPDIR=(unset)
00:48:42 Environment:PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:48:42 Environment:PYTHONPATH=(unset)
00:48:42 Environment:ICE_HOME=/opt/ice-3.6.5
00:48:42 Environment:LD_LIBRARY_PATH=(unset)
00:48:42 Environment:DYLD_LIBRARY_PATH=(unset)
00:48:42
00:48:42 OMERO SSL port:4064
00:48:42 OMERO TCP port:4063
00:48:42 OMERO data dir:'/home/omero/omero-server-data' Exists? True Is writable? True
00:48:42 OMERO temp dir:'/home/omero/omero/tmp' Exists? True Is writable? True (Size: 0)
00:48:42
00:48:42 JVM settings: Blitz-${index} -Xmx7200m
00:48:42 JVM settings: Indexer-${index} -Xmx4800m
00:48:42 JVM settings: PixelData-${index} -Xmx7200m
00:48:42 JVM settings: Repository-${index} -Xmx4800m
00:48:42
00:48:42 Jar: lib/server/formats-api.jar Bio-Formats API 8.5.0-SNAPSHOT 12 February 2026 e6cafe4335932060e39aa21d8a64b8d6d5ae9423
00:48:42 Jar: lib/server/formats-bsd.jar BSD Bio-Formats readers and writers 8.5.0-SNAPSHOT 12 February 2026 e6cafe4335932060e39aa21d8a64b8d6d5ae9423
00:48:42 Jar: lib/server/formats-gpl.jar Bio-Formats library 8.5.0-SNAPSHOT 12 February 2026 e6cafe4335932060e39aa21d8a64b8d6d5ae9423
00:48:42 Jar: lib/server/ome-codecs.jar OME Codecs 1.1.3-SNAPSHOT 12 February 2026 3e0c7ac5b5d8fa6ce16579dd755080ed3c00d564
00:48:42 Jar: lib/server/ome-common.jar OME Common Java 6.2.1-SNAPSHOT 12 February 2026 3e0c7ac5b5d8fa6ce16579dd755080ed3c00d564
00:48:42 Jar: lib/server/ome-jai.jar OME JAI 0.1.6-SNAPSHOT 12 February 2026 3e0c7ac5b5d8fa6ce16579dd755080ed3c00d564
00:48:42 Jar: lib/server/ome-mdbtools.jar MDB Tools (Java port) 5.3.5-SNAPSHOT 12 February 2026 3e0c7ac5b5d8fa6ce16579dd755080ed3c00d564
00:48:42 Jar: lib/server/ome-poi.jar OME POI 5.3.11-SNAPSHOT 12 February 2026 3e0c7ac5b5d8fa6ce16579dd755080ed3c00d564
00:48:42 Jar: lib/server/ome-xml.jar OME XML library 6.5.4-SNAPSHOT 12 February 2026 3e0c7ac5b5d8fa6ce16579dd755080ed3c00d564
00:48:42 Jar: lib/server/omero-blitz.jar jar 5.8.5-SNAPSHOT
00:48:42 Jar: lib/server/omero-common.jar jar 5.7.5-SNAPSHOT
00:48:42 Jar: lib/server/omero-gateway.jar jar 5.10.6-SNAPSHOT
00:48:42 Jar: lib/server/omero-model.jar jar 5.7.5-SNAPSHOT
00:48:42 Jar: lib/server/omero-renderer.jar jar 5.6.5-SNAPSHOT
00:48:42 Jar: lib/server/omero-romio.jar jar 5.8.5-SNAPSHOT
00:48:42 Jar: lib/server/omero-server.jar jar 5.7.5-SNAPSHOT
00:48:42 Jar: lib/server/omero-zarr-pixel-buffer-0.6.2-SNAPSHOT.jar OMERO Zarr Pixel Buffer 0.6.2-SNAPSHOT 8b8ca25e340d21c1e52da66e0a5e747728d19ee0
00:48:43 + deactivate
00:48:43 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
00:48:43 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:48:43 + export PATH
00:48:43 + unset _OLD_VIRTUAL_PATH
00:48:43 + '[' -n '' ']'
00:48:43 + hash -r
00:48:43 + '[' -n '' ']'
00:48:43 + unset VIRTUAL_ENV
00:48:43 + unset VIRTUAL_ENV_PROMPT
00:48:43 + '[' '!' '' = nondestructive ']'
00:48:43 + unset -f deactivate
00:48:43 Finished: SUCCESS
