00:47:24 Started by upstream project "Trigger" build number 55
00:47:24 originally caused by:
00:47:24 Started by timer
00:47:24 Running as SYSTEM
00:47:24 Building remotely on omero (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-server
00:47:24 [OMERO-server] $ /bin/bash -xe /tmp/jenkins17262125054240181766.sh
00:47:24 + source /home/settings.env
00:47:24 ++ OMERO_DB_HOST=pg
00:47:24 ++ OMERO_DB_USER=postgres
00:47:24 ++ OMERO_DB_PASS=
00:47:24 ++ OMERO_ROOT_PASS=omero
00:47:24 ++ OMERO_DATA_DIR=/OMERO
00:47:24 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
00:47:24 + OMERO_DB_NAME=OMERO-server
00:47:24 + OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server
00:47:24 + export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
00:47:24 + OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
00:47:24 + OMERO_DATA_DIR=/home/omero/omero-server-data
00:47:24 + '[' -e /home/omero/workspace/OMERO-server/OMERO.server ']'
00:47:24 + source /home/omero/workspace/OMERO-server/.venv3/bin/activate
00:47:24 ++ deactivate nondestructive
00:47:24 ++ '[' -n '' ']'
00:47:24 ++ '[' -n '' ']'
00:47:24 ++ hash -r
00:47:24 ++ '[' -n '' ']'
00:47:24 ++ unset VIRTUAL_ENV
00:47:24 ++ unset VIRTUAL_ENV_PROMPT
00:47:24 ++ '[' '!' nondestructive = nondestructive ']'
00:47:24 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3
00:47:24 ++ export VIRTUAL_ENV
00:47:24 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:47:24 ++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:47:24 ++ export PATH
00:47:24 ++ '[' -n '' ']'
00:47:24 ++ '[' -z '' ']'
00:47:24 ++ _OLD_VIRTUAL_PS1=
00:47:24 ++ PS1='(.venv3) '
00:47:24 ++ export PS1
00:47:24 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
00:47:24 ++ export VIRTUAL_ENV_PROMPT
00:47:24 ++ hash -r
00:47:24 + omero admin stop
00:47:25 Waiting on shutdown. Use CTRL-C to exit
00:47:25 .+ sleep 5
00:47:41 + deactivate
00:47:41 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
00:47:41 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:47:41 + export PATH
00:47:41 + unset _OLD_VIRTUAL_PATH
00:47:41 + '[' -n '' ']'
00:47:41 + hash -r
00:47:41 + '[' -n '' ']'
00:47:41 + unset VIRTUAL_ENV
00:47:41 + unset VIRTUAL_ENV_PROMPT
00:47:41 + '[' '!' '' = nondestructive ']'
00:47:41 + unset -f deactivate
00:47:41 + rm -rf /home/omero/workspace/OMERO-server/.venv3
00:47:41 + python3.11 -m venv /home/omero/workspace/OMERO-server/.venv3
00:47:45 + '[' false = true ']'
00:47:45 + echo 'Skipping PURGE_DATA:CleanDbAndRepo'
00:47:45 Skipping PURGE_DATA:CleanDbAndRepo
00:47:45 + rm -rf /home/omero/workspace/OMERO-server/omero-blitz-5.8.4-SNAPSHOT-python.zip /home/omero/workspace/OMERO-server/omero_dropbox-5.7.1.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_marshal-0.9.2.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_py-5.22.0.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_scripts-5.9.2.dev0.tar.gz /home/omero/workspace/OMERO-server/OMERO.server /home/omero/workspace/OMERO-server/omero_web-5.30.2.dev0.tar.gz /home/omero/workspace/OMERO-server/version.properties
00:47:47 Copied 1 artifact from "OMERO-build" build number 32
00:47:47 Copied 5 artifacts from "OMERO-python-superbuild-build" build number 28
00:47:47 Copied 2 artifacts from "OMERO-build-build" build number 32
00:47:47 Copied 1 artifact from "OMERO-zarr-pixel-buffer-build" build number 25
00:47:47 [OMERO-server] $ /bin/bash -xe /tmp/jenkins443273341394254091.sh
00:47:47 + source /home/settings.env
00:47:47 ++ OMERO_DB_HOST=pg
00:47:47 ++ OMERO_DB_USER=postgres
00:47:47 ++ OMERO_DB_PASS=
00:47:47 ++ OMERO_ROOT_PASS=omero
00:47:47 ++ OMERO_DATA_DIR=/OMERO
00:47:47 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
00:47:47 + OMERO_DB_NAME=OMERO-server
00:47:47 + OMERO_DATA_DIR=/home/omero/omero-server-data
00:47:47 + mkdir -p /home/omero/omero-server-data
00:47:47 + OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server
00:47:47 + export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
00:47:47 + OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
00:47:47 + export ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip
00:47:47 + ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip
00:47:47 + export VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties
00:47:47 + VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties
00:47:47 ++ ls OMERO.server-5.6.3-586-382a020f33-ice36-b32.zip
00:47:47 + ZIP=OMERO.server-5.6.3-586-382a020f33-ice36-b32.zip
00:47:47 + '[' '!' -z '' ']'
00:47:47 + DIST=OMERO.server-5.6.3-586-382a020f33-ice36-b32
00:47:47 + unzip OMERO.server-5.6.3-586-382a020f33-ice36-b32.zip
00:47:47 Archive: OMERO.server-5.6.3-586-382a020f33-ice36-b32.zip
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/blitz/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/grid/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/profiles/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/templates/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/templates/error/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/templates/grid/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/scripts/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/scripts/luts/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/scripts/luts/janelia/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/scripts/luts/matplotlib/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/scripts/luts/ncsa_paledit/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/scripts/luts/seaborn/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/scripts/luts/wcif/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/scripts/omero/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/scripts/omero/analysis_scripts/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/scripts/omero/annotation_scripts/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/scripts/omero/export_scripts/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/scripts/omero/figure_scripts/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/scripts/omero/import_scripts/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/scripts/omero/util_scripts/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/server/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/share/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/share/licenses/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/misc/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO3A__1/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO3A__10/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO3A__11/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO3A__2/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO3A__3/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO3A__4/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO3A__5/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO3A__6/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO3A__7/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO3A__8/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO3A__9/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO3__4/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO3__5/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO3__6/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO3__7/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO4.1__0/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO4.2__0/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO4.2__0/t/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO4.3__0/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO4.4__0/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO4__0/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO5.0__0/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO5.1__1/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO5.2__0/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO5.3__0/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO5.4DEV__1/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO5.4DEV__2/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO5.4DEV__3/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO5.4__0/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/var/
00:47:47 creating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/var/tmp/
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/LICENSE.txt
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/backup.cfg
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/blitz/mail-senders.example
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/blitz/mail-server.example
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/build.properties
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/env.bat
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/env.sh
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/hibernate.properties
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/ice.config
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/logback-cli.xml
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/logback-indexing-cli.xml
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/logback-indexing.xml
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/logback.xml
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/mime.types
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/node1.cfg
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/node2.cfg
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/omero.properties
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/profiles/psql
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/rollover.cfg
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/templates/Windows.cfg
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/templates/error/maintainance.html
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/templates/grid/README
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/templates/grid/default.xml
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/templates/grid/templates.xml
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/templates/grid/windefault.xml
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/templates/ice.config
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/templates/internal.cfg
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/templates/master.cfg
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/templates/robot.template
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/etc/testdropbox.config
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/history.rst
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/OMEZarrReader.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/accessors-smart.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/activation.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/aggdesigner-algorithm.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/aircompressor.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/annotations.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/antlr.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/aopalliance.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/apiguardian-api.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/asm.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/avatica-core.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/avatica-metrics.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/aws-java-sdk-core.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/aws-java-sdk-kms.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/aws-java-sdk-s3.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/base.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/batik-anim.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/batik-awt-util.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/batik-bridge.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/batik-codec.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/batik-constants.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/batik-css.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/batik-dom.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/batik-ext.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/batik-gvt.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/batik-i18n.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/batik-parser.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/batik-script.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/batik-shared-resources.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/batik-svg-dom.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/batik-svggen.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/batik-transcoder.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/batik-util.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/batik-xml.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/btm.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/calcite-core.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/calcite-linq4j.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/cdm-core.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/checker-qual.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/commons-beanutils.jar
00:47:47 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/lib/client/commons-codec.jar
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00:47:49 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql
00:47:49 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql
00:47:49 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql
00:47:49 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql
00:47:49 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql
00:47:49 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO5.4__0/OMERO5.3__0.sql
00:47:49 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql
00:47:49 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO5.4__0/OMERO5.3__1.sql
00:47:49 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql
00:47:49 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql
00:47:49 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO5.4__0/psql-footer.sql
00:47:49 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO5.4__0/psql-header.sql
00:47:49 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO5.4__0/schema.sql
00:47:49 inflating: OMERO.server-5.6.3-586-382a020f33-ice36-b32/sql/psql/OMERO5.4__0/views.sql
00:47:49 + rm -f OMERO.server-5.6.3-586-382a020f33-ice36-b32.zip
00:47:49 + mv /home/omero/workspace/OMERO-server/OMERO.server-5.6.3-586-382a020f33-ice36-b32 /home/omero/workspace/OMERO-server/OMERO.server
00:47:49 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo.maven.apache.org/maven2/com/github/ben-manes/caffeine/caffeine/3.1.8/caffeine-3.1.8.jar
00:47:49 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:47:49 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:47:49 --2026-01-24 00:47:49-- https://repo.maven.apache.org/maven2/com/github/ben-manes/caffeine/caffeine/3.1.8/caffeine-3.1.8.jar
00:47:49 Resolving repo.maven.apache.org (repo.maven.apache.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:47:49 Connecting to repo.maven.apache.org (repo.maven.apache.org)|104.18.19.12|:443... connected.
00:47:50 HTTP request sent, awaiting response... 200 OK
00:47:50 Length: 889211 (868K) [application/java-archive]
00:47:50 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/caffeine-3.1.8.jar’
00:47:50
00:47:50 0K .......... .......... .......... .......... .......... 5% 31.9M 0s
00:47:50 50K .......... .......... .......... .......... .......... 11% 3.57M 0s
00:47:50 100K .......... .......... .......... .......... .......... 17% 3.96M 0s
00:47:50 150K .......... .......... .......... .......... .......... 23% 34.0M 0s
00:47:50 200K .......... .......... .......... .......... .......... 28% 229M 0s
00:47:50 250K .......... .......... .......... .......... .......... 34% 47.6M 0s
00:47:50 300K .......... .......... .......... .......... .......... 40% 211M 0s
00:47:50 350K .......... .......... .......... .......... .......... 46% 4.45M 0s
00:47:50 400K .......... .......... .......... .......... .......... 51% 40.5M 0s
00:47:50 450K .......... .......... .......... .......... .......... 57% 137M 0s
00:47:50 500K .......... .......... .......... .......... .......... 63% 47.1M 0s
00:47:50 550K .......... .......... .......... .......... .......... 69% 291M 0s
00:47:50 600K .......... .......... .......... .......... .......... 74% 4.46M 0s
00:47:50 650K .......... .......... .......... .......... .......... 80% 35.9M 0s
00:47:50 700K .......... .......... .......... .......... .......... 86% 135M 0s
00:47:50 750K .......... .......... .......... .......... .......... 92% 51.6M 0s
00:47:50 800K .......... .......... .......... .......... .......... 97% 243M 0s
00:47:50 850K .......... ........ 100% 294M=0.06s
00:47:50
00:47:50 2026-01-24 00:47:50 (14.6 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/caffeine-3.1.8.jar’ saved [889211/889211]
00:47:50
00:47:50 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo.maven.apache.org/maven2/dev/zarr/jzarr/0.4.2/jzarr-0.4.2.jar
00:47:50 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:47:50 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:47:50 --2026-01-24 00:47:50-- https://repo.maven.apache.org/maven2/dev/zarr/jzarr/0.4.2/jzarr-0.4.2.jar
00:47:50 Resolving repo.maven.apache.org (repo.maven.apache.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:47:50 Connecting to repo.maven.apache.org (repo.maven.apache.org)|104.18.19.12|:443... connected.
00:47:50 HTTP request sent, awaiting response... 200 OK
00:47:50 Length: 73309 (72K) [application/java-archive]
00:47:50 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/jzarr-0.4.2.jar’
00:47:50
00:47:50 0K .......... .......... .......... .......... .......... 69% 31.7M 0s
00:47:50 50K .......... .......... . 100% 1.70M=0.01s
00:47:50
00:47:50 2026-01-24 00:47:50 (5.01 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/jzarr-0.4.2.jar’ saved [73309/73309]
00:47:50
00:47:50 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo.maven.apache.org/maven2/org/lasersonlab/s3fs/2.2.3/s3fs-2.2.3.jar
00:47:50 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:47:50 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:47:50 --2026-01-24 00:47:50-- https://repo.maven.apache.org/maven2/org/lasersonlab/s3fs/2.2.3/s3fs-2.2.3.jar
00:47:50 Resolving repo.maven.apache.org (repo.maven.apache.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:47:50 Connecting to repo.maven.apache.org (repo.maven.apache.org)|104.18.18.12|:443... connected.
00:47:50 HTTP request sent, awaiting response... 200 OK
00:47:50 Length: 63303 (62K) [application/java-archive]
00:47:50 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/s3fs-2.2.3.jar’
00:47:50
00:47:50 0K .......... .......... .......... .......... .......... 80% 25.4M 0s
00:47:50 50K .......... . 100% 179M=0.002s
00:47:50
00:47:50 2026-01-24 00:47:50 (30.3 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/s3fs-2.2.3.jar’ saved [63303/63303]
00:47:50
00:47:50 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo.maven.apache.org/maven2/com/amazonaws/aws-java-sdk-s3/1.12.659/aws-java-sdk-s3-1.12.659.jar
00:47:50 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:47:50 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:47:50 --2026-01-24 00:47:50-- https://repo.maven.apache.org/maven2/com/amazonaws/aws-java-sdk-s3/1.12.659/aws-java-sdk-s3-1.12.659.jar
00:47:50 Resolving repo.maven.apache.org (repo.maven.apache.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
00:47:50 Connecting to repo.maven.apache.org (repo.maven.apache.org)|104.18.19.12|:443... connected.
00:47:50 HTTP request sent, awaiting response... 200 OK
00:47:51 Length: 1271272 (1.2M) [application/java-archive]
00:47:51 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-java-sdk-s3-1.12.659.jar’
00:47:51
00:47:51 0K .......... .......... .......... .......... .......... 4% 32.3M 0s
00:47:51 50K .......... .......... .......... .......... .......... 8% 3.62M 0s
00:47:51 100K .......... .......... .......... .......... .......... 12% 19.0M 0s
00:47:51 150K .......... .......... .......... .......... .......... 16% 4.15M 0s
00:47:51 200K .......... .......... .......... .......... .......... 20% 24.9M 0s
00:47:51 250K .......... .......... .......... .......... .......... 24% 13.8M 0s
00:47:51 300K .......... .......... .......... .......... .......... 28% 25.1M 0s
00:47:51 350K .......... .......... .......... .......... .......... 32% 11.5M 0s
00:47:51 400K .......... .......... .......... .......... .......... 36% 17.0M 0s
00:47:51 450K .......... .......... .......... .......... .......... 40% 45.3M 0s
00:47:51 500K .......... .......... .......... .......... .......... 44% 18.2M 0s
00:47:51 550K .......... .......... .......... .......... .......... 48% 13.6M 0s
00:47:51 600K .......... .......... .......... .......... .......... 52% 48.7M 0s
00:47:51 650K .......... .......... .......... .......... .......... 56% 7.82M 0s
00:47:51 700K .......... .......... .......... .......... .......... 60% 113M 0s
00:47:51 750K .......... .......... .......... .......... .......... 64% 16.4M 0s
00:47:51 800K .......... .......... .......... .......... .......... 68% 16.5M 0s
00:47:51 850K .......... .......... .......... .......... .......... 72% 41.2M 0s
00:47:51 900K .......... .......... .......... .......... .......... 76% 8.07M 0s
00:47:51 950K .......... .......... .......... .......... .......... 80% 80.2M 0s
00:47:51 1000K .......... .......... .......... .......... .......... 84% 11.3M 0s
00:47:51 1050K .......... .......... .......... .......... .......... 88% 33.0M 0s
00:47:51 1100K .......... .......... .......... .......... .......... 92% 34.2M 0s
00:47:51 1150K .......... .......... .......... .......... .......... 96% 7.74M 0s
00:47:51 1200K .......... .......... .......... .......... . 100% 162M=0.09s
00:47:51
00:47:51 2026-01-24 00:47:51 (14.0 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-java-sdk-s3-1.12.659.jar’ saved [1271272/1271272]
00:47:51
00:47:51 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/com/amazonaws/aws-java-sdk-core/1.12.659/aws-java-sdk-core-1.12.659.jar
00:47:51 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:47:51 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:47:51 --2026-01-24 00:47:51-- https://repo1.maven.org/maven2/com/amazonaws/aws-java-sdk-core/1.12.659/aws-java-sdk-core-1.12.659.jar
00:47:51 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:47:51 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:47:51 HTTP request sent, awaiting response... 200 OK
00:47:51 Length: 1036468 (1012K) [application/java-archive]
00:47:51 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-java-sdk-core-1.12.659.jar’
00:47:51
00:47:51 0K .......... .......... .......... .......... .......... 4% 28.5M 0s
00:47:51 50K .......... .......... .......... .......... .......... 9% 3.50M 0s
00:47:51 100K .......... .......... .......... .......... .......... 14% 4.10M 0s
00:47:51 150K .......... .......... .......... .......... .......... 19% 34.4M 0s
00:47:51 200K .......... .......... .......... .......... .......... 24% 93.8M 0s
00:47:51 250K .......... .......... .......... .......... .......... 29% 53.0M 0s
00:47:51 300K .......... .......... .......... .......... .......... 34% 58.3M 0s
00:47:51 350K .......... .......... .......... .......... .......... 39% 4.89M 0s
00:47:51 400K .......... .......... .......... .......... .......... 44% 22.5M 0s
00:47:51 450K .......... .......... .......... .......... .......... 49% 194M 0s
00:47:51 500K .......... .......... .......... .......... .......... 54% 99.4M 0s
00:47:51 550K .......... .......... .......... .......... .......... 59% 57.3M 0s
00:47:51 600K .......... .......... .......... .......... .......... 64% 290M 0s
00:47:51 650K .......... .......... .......... .......... .......... 69% 3.89M 0s
00:47:51 700K .......... .......... .......... .......... .......... 74% 252M 0s
00:47:51 750K .......... .......... .......... .......... .......... 79% 138M 0s
00:47:51 800K .......... .......... .......... .......... .......... 83% 64.8M 0s
00:47:51 850K .......... .......... .......... .......... .......... 88% 58.2M 0s
00:47:51 900K .......... .......... .......... .......... .......... 93% 4.27M 0s
00:47:51 950K .......... .......... .......... .......... .......... 98% 257M 0s
00:47:51 1000K .......... .. 100% 242M=0.07s
00:47:51
00:47:51 2026-01-24 00:47:51 (13.8 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-java-sdk-core-1.12.659.jar’ saved [1036468/1036468]
00:47:51
00:47:51 + for x in *.jar
00:47:51 + mv omero-zarr-pixel-buffer-0.6.2-SNAPSHOT.jar /home/omero/workspace/OMERO-server/OMERO.server/lib/server
00:47:51 + source /home/omero/workspace/OMERO-server/.venv3/bin/activate
00:47:51 ++ deactivate nondestructive
00:47:51 ++ '[' -n '' ']'
00:47:51 ++ '[' -n '' ']'
00:47:51 ++ hash -r
00:47:51 ++ '[' -n '' ']'
00:47:51 ++ unset VIRTUAL_ENV
00:47:51 ++ unset VIRTUAL_ENV_PROMPT
00:47:51 ++ '[' '!' nondestructive = nondestructive ']'
00:47:51 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3
00:47:51 ++ export VIRTUAL_ENV
00:47:51 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:47:51 ++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:47:51 ++ export PATH
00:47:51 ++ '[' -n '' ']'
00:47:51 ++ '[' -z '' ']'
00:47:51 ++ _OLD_VIRTUAL_PS1=
00:47:51 ++ PS1='(.venv3) '
00:47:51 ++ export PS1
00:47:51 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
00:47:51 ++ export VIRTUAL_ENV_PROMPT
00:47:51 ++ hash -r
00:47:51 + pip install -U pip
00:47:51 Requirement already satisfied: pip in ./.venv3/lib64/python3.11/site-packages (22.3.1)
00:47:51 Collecting pip
00:47:51 Using cached pip-25.3-py3-none-any.whl (1.8 MB)
00:47:52 Installing collected packages: pip
00:47:52 Attempting uninstall: pip
00:47:52 Found existing installation: pip 22.3.1
00:47:52 Uninstalling pip-22.3.1:
00:47:52 Successfully uninstalled pip-22.3.1
00:47:53 Successfully installed pip-25.3
00:47:53 + pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl
00:47:53 Collecting zeroc-ice==3.6.5
00:47:53 Downloading https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
00:47:56 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 15.8 MB/s 0:00:02
00:47:56 Installing collected packages: zeroc-ice
00:47:57 Successfully installed zeroc-ice-3.6.5
00:47:57 + pip install markdown
00:47:57 Collecting markdown
00:47:57 Using cached markdown-3.10.1-py3-none-any.whl.metadata (5.1 kB)
00:47:57 Using cached markdown-3.10.1-py3-none-any.whl (107 kB)
00:47:57 Installing collected packages: markdown
00:47:57 Successfully installed markdown-3.10.1
00:47:57 + pip install reportlab
00:47:58 Collecting reportlab
00:47:58 Using cached reportlab-4.4.9-py3-none-any.whl.metadata (1.7 kB)
00:47:58 Collecting pillow>=9.0.0 (from reportlab)
00:47:58 Using cached pillow-12.1.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (8.8 kB)
00:47:58 Collecting charset-normalizer (from reportlab)
00:47:58 Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (37 kB)
00:47:58 Using cached reportlab-4.4.9-py3-none-any.whl (2.0 MB)
00:47:58 Using cached pillow-12.1.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (7.0 MB)
00:47:58 Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (151 kB)
00:47:58 Installing collected packages: pillow, charset-normalizer, reportlab
00:47:59
00:47:59 Successfully installed charset-normalizer-3.4.4 pillow-12.1.0 reportlab-4.4.9
00:47:59 + pip install omego
00:47:59 Collecting omego
00:47:59 Using cached omego-0.7.0-py3-none-any.whl
00:47:59 Collecting future (from omego)
00:47:59 Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
00:48:00 Collecting yaclifw>=0.1.1 (from omego)
00:48:00 Using cached yaclifw-0.2.0-py3-none-any.whl
00:48:00 Collecting six (from yaclifw>=0.1.1->omego)
00:48:00 Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
00:48:00 Using cached future-1.0.0-py3-none-any.whl (491 kB)
00:48:00 Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
00:48:00 Installing collected packages: six, future, yaclifw, omego
00:48:00
00:48:00 Successfully installed future-1.0.0 omego-0.7.0 six-1.17.0 yaclifw-0.2.0
00:48:00 + pip install tables
00:48:01 Collecting tables
00:48:01 Using cached tables-3.10.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.0 kB)
00:48:02 Collecting numpy>=1.20.0 (from tables)
00:48:02 Using cached numpy-2.4.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (6.6 kB)
00:48:02 Collecting numexpr>=2.6.2 (from tables)
00:48:02 Using cached numexpr-2.14.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (9.0 kB)
00:48:02 Collecting packaging (from tables)
00:48:02 Using cached packaging-26.0-py3-none-any.whl.metadata (3.3 kB)
00:48:02 Collecting py-cpuinfo (from tables)
00:48:02 Using cached py_cpuinfo-9.0.0-py3-none-any.whl.metadata (794 bytes)
00:48:02 Collecting blosc2>=2.3.0 (from tables)
00:48:02 Using cached blosc2-3.12.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (7.1 kB)
00:48:02 Collecting typing-extensions>=4.4.0 (from tables)
00:48:02 Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB)
00:48:02 Collecting ndindex (from blosc2>=2.3.0->tables)
00:48:02 Using cached ndindex-1.10.1-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (3.6 kB)
00:48:02 Collecting msgpack (from blosc2>=2.3.0->tables)
00:48:02 Using cached msgpack-1.1.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (8.1 kB)
00:48:02 Collecting platformdirs (from blosc2>=2.3.0->tables)
00:48:02 Using cached platformdirs-4.5.1-py3-none-any.whl.metadata (12 kB)
00:48:02 Collecting requests (from blosc2>=2.3.0->tables)
00:48:02 Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB)
00:48:02 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->blosc2>=2.3.0->tables) (3.4.4)
00:48:02 Collecting idna<4,>=2.5 (from requests->blosc2>=2.3.0->tables)
00:48:02 Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB)
00:48:02 Collecting urllib3<3,>=1.21.1 (from requests->blosc2>=2.3.0->tables)
00:48:02 Using cached urllib3-2.6.3-py3-none-any.whl.metadata (6.9 kB)
00:48:02 Collecting certifi>=2017.4.17 (from requests->blosc2>=2.3.0->tables)
00:48:02 Using cached certifi-2026.1.4-py3-none-any.whl.metadata (2.5 kB)
00:48:02 Using cached tables-3.10.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (7.5 MB)
00:48:02 Using cached blosc2-3.12.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (4.5 MB)
00:48:02 Using cached numexpr-2.14.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (442 kB)
00:48:02 Using cached numpy-2.4.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.7 MB)
00:48:02 Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB)
00:48:02 Using cached msgpack-1.1.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (426 kB)
00:48:02 Using cached ndindex-1.10.1-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (516 kB)
00:48:02 Using cached packaging-26.0-py3-none-any.whl (74 kB)
00:48:02 Using cached platformdirs-4.5.1-py3-none-any.whl (18 kB)
00:48:02 Using cached py_cpuinfo-9.0.0-py3-none-any.whl (22 kB)
00:48:02 Using cached requests-2.32.5-py3-none-any.whl (64 kB)
00:48:02 Using cached idna-3.11-py3-none-any.whl (71 kB)
00:48:02 Using cached urllib3-2.6.3-py3-none-any.whl (131 kB)
00:48:02 Using cached certifi-2026.1.4-py3-none-any.whl (152 kB)
00:48:02 Installing collected packages: py-cpuinfo, urllib3, typing-extensions, platformdirs, packaging, numpy, ndindex, msgpack, idna, certifi, requests, numexpr, blosc2, tables
00:48:06
00:48:06 Successfully installed blosc2-3.12.2 certifi-2026.1.4 idna-3.11 msgpack-1.1.2 ndindex-1.10.1 numexpr-2.14.1 numpy-2.4.1 packaging-26.0 platformdirs-4.5.1 py-cpuinfo-9.0.0 requests-2.32.5 tables-3.10.2 typing-extensions-4.15.0 urllib3-2.6.3
00:48:06 + pip install jinja2
00:48:06 Collecting jinja2
00:48:06 Using cached jinja2-3.1.6-py3-none-any.whl.metadata (2.9 kB)
00:48:06 Collecting MarkupSafe>=2.0 (from jinja2)
00:48:06 Using cached markupsafe-3.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.7 kB)
00:48:06 Using cached jinja2-3.1.6-py3-none-any.whl (134 kB)
00:48:06 Using cached markupsafe-3.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (22 kB)
00:48:06 Installing collected packages: MarkupSafe, jinja2
00:48:06
00:48:06 Successfully installed MarkupSafe-3.0.3 jinja2-3.1.6
00:48:06 + pip install omero-py
00:48:07 Collecting omero-py
00:48:07 Using cached omero_py-5.21.3-py3-none-any.whl.metadata (6.5 kB)
00:48:07 Collecting appdirs (from omero-py)
00:48:07 Using cached appdirs-1.4.4-py2.py3-none-any.whl.metadata (9.0 kB)
00:48:07 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py) (1.0.0)
00:48:07 Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (2.4.1)
00:48:07 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (12.1.0)
00:48:07 Collecting PyYAML (from omero-py)
00:48:07 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB)
00:48:07 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (3.6.5)
00:48:07 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py) (2.32.5)
00:48:07 Collecting portalocker (from omero-py)
00:48:07 Using cached portalocker-3.2.0-py3-none-any.whl.metadata (8.7 kB)
00:48:07 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (3.4.4)
00:48:07 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (3.11)
00:48:07 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (2.6.3)
00:48:07 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (2026.1.4)
00:48:07 Using cached omero_py-5.21.3-py3-none-any.whl (2.8 MB)
00:48:07 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
00:48:07 Using cached portalocker-3.2.0-py3-none-any.whl (22 kB)
00:48:07 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
00:48:07 Installing collected packages: appdirs, PyYAML, portalocker, omero-py
00:48:09
00:48:09 Successfully installed PyYAML-6.0.3 appdirs-1.4.4 omero-py-5.21.3 portalocker-3.2.0
00:48:09 + pip install git+https://github.com/snoopycrimecop/omero-metadata.git@merge_ci#egg=omero-metadata
00:48:09 Collecting omero-metadata
00:48:09 Cloning https://github.com/snoopycrimecop/omero-metadata.git (to revision merge_ci) to /tmp/pip-install-9ulpaup4/omero-metadata_191e030d8c994ae7a4eea1899977e500
00:48:09 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-metadata.git /tmp/pip-install-9ulpaup4/omero-metadata_191e030d8c994ae7a4eea1899977e500
00:48:15 Resolved https://github.com/snoopycrimecop/omero-metadata.git to commit 91024254159dd749b6f10a56770879f1fced632f
00:48:15 Installing build dependencies: started
00:48:16 Installing build dependencies: finished with status 'done'
00:48:16 Getting requirements to build wheel: started
00:48:16 Getting requirements to build wheel: finished with status 'done'
00:48:16 Preparing metadata (pyproject.toml): started
00:48:16 Preparing metadata (pyproject.toml): finished with status 'done'
00:48:16 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-metadata) (5.21.3)
00:48:16 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-metadata) (6.0.3)
00:48:16 Requirement already satisfied: jinja2 in ./.venv3/lib64/python3.11/site-packages (from omero-metadata) (3.1.6)
00:48:17 Collecting pandas (from omero-metadata)
00:48:17 Using cached pandas-3.0.0-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (79 kB)
00:48:17 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (1.4.4)
00:48:17 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (1.0.0)
00:48:17 Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (2.4.1)
00:48:17 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (12.1.0)
00:48:17 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (3.6.5)
00:48:17 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (2.32.5)
00:48:17 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (3.2.0)
00:48:17 Requirement already satisfied: MarkupSafe>=2.0 in ./.venv3/lib64/python3.11/site-packages (from jinja2->omero-metadata) (3.0.3)
00:48:17 Collecting python-dateutil>=2.8.2 (from pandas->omero-metadata)
00:48:17 Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl.metadata (8.4 kB)
00:48:17 Requirement already satisfied: six>=1.5 in ./.venv3/lib64/python3.11/site-packages (from python-dateutil>=2.8.2->pandas->omero-metadata) (1.17.0)
00:48:17 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.4.4)
00:48:17 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.11)
00:48:17 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (2.6.3)
00:48:17 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (2026.1.4)
00:48:17 Using cached pandas-3.0.0-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (11.2 MB)
00:48:17 Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl (229 kB)
00:48:17 Building wheels for collected packages: omero-metadata
00:48:17 Building wheel for omero-metadata (pyproject.toml): started
00:48:17 Building wheel for omero-metadata (pyproject.toml): finished with status 'done'
00:48:17 Created wheel for omero-metadata: filename=omero_metadata-0.13.1.dev0-py3-none-any.whl size=39373 sha256=7601f815e6f6c4356477c82a93ad03069b7016fbbff8377eb09fe26e2cd5a207
00:48:17 Stored in directory: /tmp/pip-ephem-wheel-cache-3wfgi2kb/wheels/6b/49/26/d56ff0fc3b918823c05ff86cc0686c3a577289ddc39151269b
00:48:17 Successfully built omero-metadata
00:48:17 Installing collected packages: python-dateutil, pandas, omero-metadata
00:48:23
00:48:23 Successfully installed omero-metadata-0.13.1.dev0 pandas-3.0.0 python-dateutil-2.9.0.post0
00:48:23 + pip install git+https://github.com/snoopycrimecop/omero-cli-render.git@merge_ci#egg=omero-cli-render
00:48:23 Collecting omero-cli-render
00:48:23 Cloning https://github.com/snoopycrimecop/omero-cli-render.git (to revision merge_ci) to /tmp/pip-install-j1wc8fwm/omero-cli-render_1e5a7fc5d5d5492f8b80fc8911b663f1
00:48:23 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-render.git /tmp/pip-install-j1wc8fwm/omero-cli-render_1e5a7fc5d5d5492f8b80fc8911b663f1
00:48:26 Running command git checkout -b merge_ci --track origin/merge_ci
00:48:26 Switched to a new branch 'merge_ci'
00:48:26 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:48:26 Resolved https://github.com/snoopycrimecop/omero-cli-render.git to commit afdf523f5d5fbd608c0102474b7adc88bb98aaa6
00:48:26 Installing build dependencies: started
00:48:27 Installing build dependencies: finished with status 'done'
00:48:27 Getting requirements to build wheel: started
00:48:27 Getting requirements to build wheel: finished with status 'done'
00:48:27 Preparing metadata (pyproject.toml): started
00:48:27 Preparing metadata (pyproject.toml): finished with status 'done'
00:48:27 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-cli-render) (6.0.3)
00:48:27 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-render) (5.21.3)
00:48:27 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.4.4)
00:48:27 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.0.0)
00:48:27 Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (2.4.1)
00:48:27 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (12.1.0)
00:48:27 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (3.6.5)
00:48:27 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (2.32.5)
00:48:27 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (3.2.0)
00:48:27 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.4.4)
00:48:27 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.11)
00:48:27 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (2.6.3)
00:48:27 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (2026.1.4)
00:48:27 Building wheels for collected packages: omero-cli-render
00:48:27 Building wheel for omero-cli-render (pyproject.toml): started
00:48:27 Building wheel for omero-cli-render (pyproject.toml): finished with status 'done'
00:48:27 Created wheel for omero-cli-render: filename=omero_cli_render-0.8.2.dev0-py3-none-any.whl size=19841 sha256=f4bc85c5c8b708a7d8851fbb2ffaa615626d3ef516bdb865168ec48d059b9942
00:48:27 Stored in directory: /tmp/pip-ephem-wheel-cache-zu1wrat4/wheels/cc/67/86/ff54ee10a8ea8ae7a21cceb878741010ef1de4a7d93df129ee
00:48:27 Successfully built omero-cli-render
00:48:27 Installing collected packages: omero-cli-render
00:48:27 Successfully installed omero-cli-render-0.8.2.dev0
00:48:28 + pip install git+https://github.com/snoopycrimecop/omero-cli-duplicate.git@merge_ci#egg=omero-cli-duplicate
00:48:28 Collecting omero-cli-duplicate
00:48:28 Cloning https://github.com/snoopycrimecop/omero-cli-duplicate.git (to revision merge_ci) to /tmp/pip-install-gzfi9s1u/omero-cli-duplicate_ec5c060fedaf41398cb87bc82af0f9f0
00:48:28 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-duplicate.git /tmp/pip-install-gzfi9s1u/omero-cli-duplicate_ec5c060fedaf41398cb87bc82af0f9f0
00:48:29 Running command git checkout -b merge_ci --track origin/merge_ci
00:48:29 Switched to a new branch 'merge_ci'
00:48:29 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:48:29 Resolved https://github.com/snoopycrimecop/omero-cli-duplicate.git to commit 70466b6d4729dde93d0fa4757b53d42c8ec07cf1
00:48:29 Installing build dependencies: started
00:48:30 Installing build dependencies: finished with status 'done'
00:48:30 Getting requirements to build wheel: started
00:48:30 Getting requirements to build wheel: finished with status 'done'
00:48:30 Preparing metadata (pyproject.toml): started
00:48:30 Preparing metadata (pyproject.toml): finished with status 'done'
00:48:30 Requirement already satisfied: omero-py>=5.8 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-duplicate) (5.21.3)
00:48:30 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.4.4)
00:48:30 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.0.0)
00:48:30 Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.4.1)
00:48:30 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (12.1.0)
00:48:30 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (6.0.3)
00:48:30 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.6.5)
00:48:30 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.32.5)
00:48:30 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.2.0)
00:48:30 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.4.4)
00:48:30 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.11)
00:48:30 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2.6.3)
00:48:30 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2026.1.4)
00:48:30 Building wheels for collected packages: omero-cli-duplicate
00:48:30 Building wheel for omero-cli-duplicate (pyproject.toml): started
00:48:30 Building wheel for omero-cli-duplicate (pyproject.toml): finished with status 'done'
00:48:30 Created wheel for omero-cli-duplicate: filename=omero_cli_duplicate-0.4.1.dev0-py3-none-any.whl size=11538 sha256=8559a175a101666b036e1e47e6de9ffdc0f1c86591d6181f3c4ecbeade1c7465
00:48:30 Stored in directory: /tmp/pip-ephem-wheel-cache-yxg2apjz/wheels/28/e4/77/20667ec1be487a1994d60f59ce11eeba2ac0c8c34aea209b46
00:48:30 Successfully built omero-cli-duplicate
00:48:30 Installing collected packages: omero-cli-duplicate
00:48:30 Successfully installed omero-cli-duplicate-0.4.1.dev0
00:48:30 + pip install git+https://github.com/snoopycrimecop/omero-cli-zarr.git@merge_ci#egg=omero-cli-zarr
00:48:31 Collecting omero-cli-zarr
00:48:31 Cloning https://github.com/snoopycrimecop/omero-cli-zarr.git (to revision merge_ci) to /tmp/pip-install-4kn6d5kw/omero-cli-zarr_ae0deae528c641a6b7fec15177b0d360
00:48:31 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-zarr.git /tmp/pip-install-4kn6d5kw/omero-cli-zarr_ae0deae528c641a6b7fec15177b0d360
00:48:31 Running command git checkout -b merge_ci --track origin/merge_ci
00:48:32 Switched to a new branch 'merge_ci'
00:48:32 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:48:32 Resolved https://github.com/snoopycrimecop/omero-cli-zarr.git to commit d141a45a33b913ef4c14fec2ac215c91d46049f7
00:48:32 Installing build dependencies: started
00:48:32 Installing build dependencies: finished with status 'done'
00:48:33 Getting requirements to build wheel: started
00:48:33 Getting requirements to build wheel: finished with status 'done'
00:48:33 Installing backend dependencies: started
00:48:34 Installing backend dependencies: finished with status 'done'
00:48:34 Preparing metadata (pyproject.toml): started
00:48:34 Preparing metadata (pyproject.toml): finished with status 'done'
00:48:34 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-zarr) (5.21.3)
00:48:34 Collecting ome-zarr>=0.12.0 (from omero-cli-zarr)
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00:48:34 Requirement already satisfied: numpy in ./.venv3/lib64/python3.11/site-packages (from ome-zarr>=0.12.0->omero-cli-zarr) (2.4.1)
00:48:34 Collecting dask (from ome-zarr>=0.12.0->omero-cli-zarr)
00:48:34 Using cached dask-2026.1.1-py3-none-any.whl.metadata (3.8 kB)
00:48:34 Collecting zarr>=v3.0.0 (from ome-zarr>=0.12.0->omero-cli-zarr)
00:48:34 Downloading zarr-3.1.5-py3-none-any.whl.metadata (10 kB)
00:48:35 Collecting fsspec!=2021.07.0,!=2023.9.0,>=0.8 (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.12.0->omero-cli-zarr)
00:48:35 Using cached fsspec-2026.1.0-py3-none-any.whl.metadata (10 kB)
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00:48:35 Using cached aiohttp-3.13.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (8.1 kB)
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00:48:35 Collecting scikit-image>=0.19.0 (from ome-zarr>=0.12.0->omero-cli-zarr)
00:48:35 Using cached scikit_image-0.26.0-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (15 kB)
00:48:35 Collecting toolz (from ome-zarr>=0.12.0->omero-cli-zarr)
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00:48:35 Collecting s3fs (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.12.0->omero-cli-zarr)
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00:48:35 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (3.2.0)
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00:48:36 Using cached scipy-1.17.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (62 kB)
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00:48:36 Using cached networkx-3.6.1-py3-none-any.whl.metadata (6.8 kB)
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00:48:36 Collecting lazy-loader>=0.4 (from scikit-image>=0.19.0->ome-zarr>=0.12.0->omero-cli-zarr)
00:48:36 Using cached lazy_loader-0.4-py3-none-any.whl.metadata (7.6 kB)
00:48:36 Collecting donfig>=0.8 (from zarr>=v3.0.0->ome-zarr>=0.12.0->omero-cli-zarr)
00:48:36 Downloading donfig-0.8.1.post1-py3-none-any.whl.metadata (5.0 kB)
00:48:36 Collecting google-crc32c>=1.5 (from zarr>=v3.0.0->ome-zarr>=0.12.0->omero-cli-zarr)
00:48:36 Downloading google_crc32c-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_5_x86_64.whl.metadata (1.7 kB)
00:48:36 Collecting numcodecs>=0.14 (from zarr>=v3.0.0->ome-zarr>=0.12.0->omero-cli-zarr)
00:48:36 Downloading numcodecs-0.16.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (3.4 kB)
00:48:36 Requirement already satisfied: typing-extensions>=4.9 in ./.venv3/lib64/python3.11/site-packages (from zarr>=v3.0.0->ome-zarr>=0.12.0->omero-cli-zarr) (4.15.0)
00:48:36 Collecting aiohappyeyeballs>=2.5.0 (from aiohttp->ome-zarr>=0.12.0->omero-cli-zarr)
00:48:36 Using cached aiohappyeyeballs-2.6.1-py3-none-any.whl.metadata (5.9 kB)
00:48:36 Collecting aiosignal>=1.4.0 (from aiohttp->ome-zarr>=0.12.0->omero-cli-zarr)
00:48:36 Using cached aiosignal-1.4.0-py3-none-any.whl.metadata (3.7 kB)
00:48:36 Collecting attrs>=17.3.0 (from aiohttp->ome-zarr>=0.12.0->omero-cli-zarr)
00:48:36 Using cached attrs-25.4.0-py3-none-any.whl.metadata (10 kB)
00:48:36 Collecting frozenlist>=1.1.1 (from aiohttp->ome-zarr>=0.12.0->omero-cli-zarr)
00:48:36 Using cached frozenlist-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl.metadata (20 kB)
00:48:36 Collecting multidict<7.0,>=4.5 (from aiohttp->ome-zarr>=0.12.0->omero-cli-zarr)
00:48:36 Using cached multidict-6.7.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (5.3 kB)
00:48:37 Collecting propcache>=0.2.0 (from aiohttp->ome-zarr>=0.12.0->omero-cli-zarr)
00:48:37 Using cached propcache-0.4.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (13 kB)
00:48:37 Collecting yarl<2.0,>=1.17.0 (from aiohttp->ome-zarr>=0.12.0->omero-cli-zarr)
00:48:37 Using cached yarl-1.22.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (75 kB)
00:48:37 Requirement already satisfied: idna>=2.0 in ./.venv3/lib64/python3.11/site-packages (from yarl<2.0,>=1.17.0->aiohttp->ome-zarr>=0.12.0->omero-cli-zarr) (3.11)
00:48:37 Collecting click>=8.1 (from dask->ome-zarr>=0.12.0->omero-cli-zarr)
00:48:37 Using cached click-8.3.1-py3-none-any.whl.metadata (2.6 kB)
00:48:37 Collecting cloudpickle>=3.0.0 (from dask->ome-zarr>=0.12.0->omero-cli-zarr)
00:48:37 Using cached cloudpickle-3.1.2-py3-none-any.whl.metadata (7.1 kB)
00:48:37 Collecting partd>=1.4.0 (from dask->ome-zarr>=0.12.0->omero-cli-zarr)
00:48:37 Using cached partd-1.4.2-py3-none-any.whl.metadata (4.6 kB)
00:48:37 Collecting importlib_metadata>=4.13.0 (from dask->ome-zarr>=0.12.0->omero-cli-zarr)
00:48:37 Using cached importlib_metadata-8.7.1-py3-none-any.whl.metadata (4.7 kB)
00:48:37 Collecting zipp>=3.20 (from importlib_metadata>=4.13.0->dask->ome-zarr>=0.12.0->omero-cli-zarr)
00:48:37 Using cached zipp-3.23.0-py3-none-any.whl.metadata (3.6 kB)
00:48:37 Collecting locket (from partd>=1.4.0->dask->ome-zarr>=0.12.0->omero-cli-zarr)
00:48:37 Using cached locket-1.0.0-py2.py3-none-any.whl.metadata (2.8 kB)
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00:48:37 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->ome-zarr>=0.12.0->omero-cli-zarr) (2026.1.4)
00:48:37 Collecting aiobotocore<4.0.0,>=2.5.4 (from s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.12.0->omero-cli-zarr)
00:48:37 Using cached aiobotocore-3.1.1-py3-none-any.whl.metadata (26 kB)
00:48:37 Collecting aioitertools<1.0.0,>=0.5.1 (from aiobotocore<4.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.12.0->omero-cli-zarr)
00:48:37 Using cached aioitertools-0.13.0-py3-none-any.whl.metadata (3.3 kB)
00:48:38 Collecting botocore<1.42.31,>=1.41.0 (from aiobotocore<4.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.12.0->omero-cli-zarr)
00:48:38 Using cached botocore-1.42.30-py3-none-any.whl.metadata (5.9 kB)
00:48:38 Requirement already satisfied: python-dateutil<3.0.0,>=2.1 in ./.venv3/lib64/python3.11/site-packages (from aiobotocore<4.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.12.0->omero-cli-zarr) (2.9.0.post0)
00:48:38 Collecting jmespath<2.0.0,>=0.7.1 (from aiobotocore<4.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.12.0->omero-cli-zarr)
00:48:38 Using cached jmespath-1.1.0-py3-none-any.whl.metadata (7.6 kB)
00:48:38 Collecting wrapt<3.0.0,>=1.10.10 (from aiobotocore<4.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.12.0->omero-cli-zarr)
00:48:38 Using cached wrapt-2.0.1-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl.metadata (9.0 kB)
00:48:38 Requirement already satisfied: six>=1.5 in ./.venv3/lib64/python3.11/site-packages (from python-dateutil<3.0.0,>=2.1->aiobotocore<4.0.0,>=2.5.4->s3fs->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.12.0->omero-cli-zarr) (1.17.0)
00:48:38 Downloading ome_zarr-0.12.2-py3-none-any.whl (41 kB)
00:48:38 Using cached fsspec-2026.1.0-py3-none-any.whl (201 kB)
00:48:38 Using cached scikit_image-0.26.0-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (13.7 MB)
00:48:38 Using cached imageio-2.37.2-py3-none-any.whl (317 kB)
00:48:38 Using cached lazy_loader-0.4-py3-none-any.whl (12 kB)
00:48:38 Using cached networkx-3.6.1-py3-none-any.whl (2.1 MB)
00:48:38 Using cached scipy-1.17.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (35.1 MB)
00:48:38 Using cached tifffile-2026.1.14-py3-none-any.whl (232 kB)
00:48:38 Downloading zarr-3.1.5-py3-none-any.whl (284 kB)
00:48:38 Downloading donfig-0.8.1.post1-py3-none-any.whl (21 kB)
00:48:38 Downloading google_crc32c-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_5_x86_64.whl (33 kB)
00:48:38 Downloading numcodecs-0.16.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (9.1 MB)
00:48:39 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 9.1/9.1 MB 21.2 MB/s 0:00:00
00:48:39 Using cached aiohttp-3.13.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (1.7 MB)
00:48:39 Using cached multidict-6.7.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (246 kB)
00:48:39 Using cached yarl-1.22.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (365 kB)
00:48:39 Using cached aiohappyeyeballs-2.6.1-py3-none-any.whl (15 kB)
00:48:39 Using cached aiosignal-1.4.0-py3-none-any.whl (7.5 kB)
00:48:39 Using cached attrs-25.4.0-py3-none-any.whl (67 kB)
00:48:39 Using cached frozenlist-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl (231 kB)
00:48:39 Using cached propcache-0.4.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (210 kB)
00:48:39 Using cached dask-2026.1.1-py3-none-any.whl (1.5 MB)
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00:48:39 Using cached locket-1.0.0-py2.py3-none-any.whl (4.4 kB)
00:48:39 Using cached s3fs-2026.1.0-py3-none-any.whl (30 kB)
00:48:39 Using cached aiobotocore-3.1.1-py3-none-any.whl (87 kB)
00:48:39 Using cached aioitertools-0.13.0-py3-none-any.whl (24 kB)
00:48:39 Using cached botocore-1.42.30-py3-none-any.whl (14.6 MB)
00:48:39 Using cached jmespath-1.1.0-py3-none-any.whl (20 kB)
00:48:39 Using cached wrapt-2.0.1-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl (114 kB)
00:48:39 Building wheels for collected packages: omero-cli-zarr
00:48:39 Building wheel for omero-cli-zarr (pyproject.toml): started
00:48:39 Building wheel for omero-cli-zarr (pyproject.toml): finished with status 'done'
00:48:39 Created wheel for omero-cli-zarr: filename=omero_cli_zarr-0.5.5.dev137+gd141a45-py3-none-any.whl size=37765 sha256=239e2dfcf50bd1416a6bd7786d00faa7579a994ddaeb85337db5cede3f113307
00:48:39 Stored in directory: /tmp/pip-ephem-wheel-cache-omob4dzo/wheels/23/9b/a6/58188c5a16d0876457bd9f2c6a2fb9759c671db67032a0e529
00:48:39 Successfully built omero-cli-zarr
00:48:39 Installing collected packages: zipp, wrapt, toolz, tifffile, scipy, propcache, numcodecs, networkx, multidict, locket, lazy-loader, jmespath, imageio, google-crc32c, fsspec, frozenlist, donfig, cloudpickle, click, attrs, aioitertools, aiohappyeyeballs, zarr, yarl, scikit-image, partd, importlib_metadata, botocore, aiosignal, dask, aiohttp, aiobotocore, s3fs, ome-zarr, omero-cli-zarr
00:48:49
00:48:49 Successfully installed aiobotocore-3.1.1 aiohappyeyeballs-2.6.1 aiohttp-3.13.3 aioitertools-0.13.0 aiosignal-1.4.0 attrs-25.4.0 botocore-1.42.30 click-8.3.1 cloudpickle-3.1.2 dask-2026.1.1 donfig-0.8.1.post1 frozenlist-1.8.0 fsspec-2026.1.0 google-crc32c-1.8.0 imageio-2.37.2 importlib_metadata-8.7.1 jmespath-1.1.0 lazy-loader-0.4 locket-1.0.0 multidict-6.7.0 networkx-3.6.1 numcodecs-0.16.5 ome-zarr-0.12.2 omero-cli-zarr-0.5.5.dev137+gd141a45 partd-1.4.2 propcache-0.4.1 s3fs-2026.1.0 scikit-image-0.26.0 scipy-1.17.0 tifffile-2026.1.14 toolz-1.1.0 wrapt-2.0.1 yarl-1.22.0 zarr-3.1.5 zipp-3.23.0
00:48:50 + pip install omero-certificates
00:48:50 Collecting omero-certificates
00:48:50 Using cached omero_certificates-0.4.0-py3-none-any.whl.metadata (3.3 kB)
00:48:50 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-certificates) (5.21.3)
00:48:50 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (1.4.4)
00:48:50 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (1.0.0)
00:48:50 Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (2.4.1)
00:48:50 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (12.1.0)
00:48:50 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (6.0.3)
00:48:50 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (3.6.5)
00:48:50 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (2.32.5)
00:48:50 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (3.2.0)
00:48:50 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.4.4)
00:48:50 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.11)
00:48:50 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2.6.3)
00:48:50 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2026.1.4)
00:48:50 Using cached omero_certificates-0.4.0-py3-none-any.whl (11 kB)
00:48:50 Installing collected packages: omero-certificates
00:48:50 Successfully installed omero-certificates-0.4.0
00:48:50 + for x in *.tar.gz
00:48:50 + pip install -U omero_dropbox-5.7.1.dev0.tar.gz
00:48:51 Processing ./omero_dropbox-5.7.1.dev0.tar.gz
00:48:51 Installing build dependencies: started
00:48:51 Installing build dependencies: finished with status 'done'
00:48:51 Getting requirements to build wheel: started
00:48:52 Getting requirements to build wheel: finished with status 'done'
00:48:52 Preparing metadata (pyproject.toml): started
00:48:52 Preparing metadata (pyproject.toml): finished with status 'done'
00:48:52 Requirement already satisfied: omero-py in ./.venv3/lib64/python3.11/site-packages (from omero-dropbox==5.7.1.dev0) (5.21.3)
00:48:52 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.4.4)
00:48:52 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.0.0)
00:48:52 Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.4.1)
00:48:52 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (12.1.0)
00:48:52 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (6.0.3)
00:48:52 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5)
00:48:52 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.32.5)
00:48:52 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.2.0)
00:48:52 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.4.4)
00:48:52 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.11)
00:48:52 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2.6.3)
00:48:52 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2026.1.4)
00:48:52 Building wheels for collected packages: omero-dropbox
00:48:52 Building wheel for omero-dropbox (pyproject.toml): started
00:48:53 Building wheel for omero-dropbox (pyproject.toml): finished with status 'done'
00:48:53 Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49138 sha256=1c599c3f3feaf7c8019f1a1fcc7f1b54c89d3694c32723bf37493ec303f8cd38
00:48:53 Stored in directory: /home/omero/.cache/pip/wheels/97/54/5f/8dccf5c24b891c9bef25978dac72ee622eda35946855e06c92
00:48:53 Successfully built omero-dropbox
00:48:53 Installing collected packages: omero-dropbox
00:48:53 Successfully installed omero-dropbox-5.7.1.dev0
00:48:53 + for x in *.tar.gz
00:48:53 + pip install -U omero_marshal-0.9.2.dev0.tar.gz
00:48:53 Processing ./omero_marshal-0.9.2.dev0.tar.gz
00:48:53 Installing build dependencies: started
00:48:54 Installing build dependencies: finished with status 'done'
00:48:54 Getting requirements to build wheel: started
00:48:54 Getting requirements to build wheel: finished with status 'done'
00:48:54 Preparing metadata (pyproject.toml): started
00:48:55 Preparing metadata (pyproject.toml): finished with status 'done'
00:48:55 Building wheels for collected packages: omero_marshal
00:48:55 Building wheel for omero_marshal (pyproject.toml): started
00:48:55 Building wheel for omero_marshal (pyproject.toml): finished with status 'done'
00:48:55 Created wheel for omero_marshal: filename=omero_marshal-0.9.2.dev0-py3-none-any.whl size=88128 sha256=4185b06ade3d0e16c7c687e42a1d04ccbbb06fb8a9006d732b3aad8275730c6d
00:48:55 Stored in directory: /home/omero/.cache/pip/wheels/38/19/f8/b7cbc5aa44dc10bd3c24777f40a22cf6ed1baeac622bbf8230
00:48:55 Successfully built omero_marshal
00:48:55 Installing collected packages: omero_marshal
00:48:55 Successfully installed omero_marshal-0.9.2.dev0
00:48:55 + for x in *.tar.gz
00:48:55 + pip install -U omero_py-5.22.0.dev0.tar.gz
00:48:56 Processing ./omero_py-5.22.0.dev0.tar.gz
00:48:56 Installing build dependencies: started
00:48:57 Installing build dependencies: finished with status 'done'
00:48:57 Getting requirements to build wheel: started
00:48:57 Getting requirements to build wheel: finished with status 'done'
00:48:57 Preparing metadata (pyproject.toml): started
00:48:57 Preparing metadata (pyproject.toml): finished with status 'done'
00:48:57 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (1.4.4)
00:48:57 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (1.0.0)
00:48:57 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (2.4.1)
00:48:57 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (12.1.0)
00:48:57 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (6.0.3)
00:48:57 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (3.6.5)
00:48:57 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (2.32.5)
00:48:57 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (3.2.0)
00:48:57 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.0.dev0) (3.4.4)
00:48:57 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.0.dev0) (3.11)
00:48:57 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.0.dev0) (2.6.3)
00:48:57 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.0.dev0) (2026.1.4)
00:48:57 Building wheels for collected packages: omero-py
00:48:57 Building wheel for omero-py (pyproject.toml): started
00:48:58 Building wheel for omero-py (pyproject.toml): finished with status 'done'
00:48:58 Created wheel for omero-py: filename=omero_py-5.22.0.dev0-py3-none-any.whl size=2786450 sha256=6f737743f8bf33850148e38eeb075f5087fc7bc338d00ffa7ed65d77841e6424
00:48:58 Stored in directory: /home/omero/.cache/pip/wheels/b2/dd/fb/0f3c8a08eddbfe6a2bff7fe7d61ee876973c474d282bc441e3
00:48:58 Successfully built omero-py
00:48:58 Installing collected packages: omero-py
00:48:58 Attempting uninstall: omero-py
00:48:58 Found existing installation: omero-py 5.21.3
00:48:58 Uninstalling omero-py-5.21.3:
00:48:59 Successfully uninstalled omero-py-5.21.3
00:49:01 Successfully installed omero-py-5.22.0.dev0
00:49:01 + for x in *.tar.gz
00:49:01 + pip install -U omero_scripts-5.9.2.dev0.tar.gz
00:49:01 Processing ./omero_scripts-5.9.2.dev0.tar.gz
00:49:01 Installing build dependencies: started
00:49:02 Installing build dependencies: finished with status 'done'
00:49:02 Getting requirements to build wheel: started
00:49:02 Getting requirements to build wheel: finished with status 'done'
00:49:02 Preparing metadata (pyproject.toml): started
00:49:02 Preparing metadata (pyproject.toml): finished with status 'done'
00:49:02 Building wheels for collected packages: omero-scripts
00:49:02 Building wheel for omero-scripts (pyproject.toml): started
00:49:03 Building wheel for omero-scripts (pyproject.toml): finished with status 'done'
00:49:03 Created wheel for omero-scripts: filename=omero_scripts-5.9.2.dev0-py3-none-any.whl size=136991 sha256=fc9afe2f74cb45c6ab42064931c803e249b9990539d975f4a2034e6b9a59ee12
00:49:03 Stored in directory: /home/omero/.cache/pip/wheels/e3/db/94/c7ed73401c8459f3935212f514ee953d11b520ca8c20333850
00:49:03 Successfully built omero-scripts
00:49:03 Installing collected packages: omero-scripts
00:49:03 Successfully installed omero-scripts-5.9.2.dev0
00:49:03 + for x in *.tar.gz
00:49:03 + pip install -U omero_web-5.30.2.dev0.tar.gz
00:49:03 Processing ./omero_web-5.30.2.dev0.tar.gz
00:49:04 Installing build dependencies: started
00:49:04 Installing build dependencies: finished with status 'done'
00:49:04 Getting requirements to build wheel: started
00:49:05 Getting requirements to build wheel: finished with status 'done'
00:49:05 Preparing metadata (pyproject.toml): started
00:49:05 Preparing metadata (pyproject.toml): finished with status 'done'
00:49:05 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (5.22.0.dev0)
00:49:05 Collecting concurrent-log-handler>=0.9.20 (from omero-web==5.30.2.dev0)
00:49:05 Using cached concurrent_log_handler-0.9.28-py3-none-any.whl.metadata (23 kB)
00:49:05 Collecting Django<5.3,>=5.2.9 (from omero-web==5.30.2.dev0)
00:49:05 Using cached django-5.2.10-py3-none-any.whl.metadata (4.1 kB)
00:49:05 Collecting django-pipeline (from omero-web==5.30.2.dev0)
00:49:05 Using cached django_pipeline-4.1.0-py3-none-any.whl.metadata (5.9 kB)
00:49:05 Collecting django-cors-headers==3.7.0 (from omero-web==5.30.2.dev0)
00:49:05 Using cached django_cors_headers-3.7.0-py3-none-any.whl.metadata (15 kB)
00:49:05 Collecting whitenoise>=5.3.0 (from omero-web==5.30.2.dev0)
00:49:05 Using cached whitenoise-6.11.0-py3-none-any.whl.metadata (3.7 kB)
00:49:05 Collecting gunicorn>=19.3 (from omero-web==5.30.2.dev0)
00:49:05 Downloading gunicorn-24.1.0-py3-none-any.whl.metadata (4.5 kB)
00:49:05 Requirement already satisfied: omero-marshal>=0.9.1 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (0.9.2.dev0)
00:49:05 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (12.1.0)
00:49:05 Collecting pytz (from omero-web==5.30.2.dev0)
00:49:05 Using cached pytz-2025.2-py2.py3-none-any.whl.metadata (22 kB)
00:49:06 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (3.2.0)
00:49:06 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (26.0)
00:49:06 Collecting importlib-resources (from omero-web==5.30.2.dev0)
00:49:06 Using cached importlib_resources-6.5.2-py3-none-any.whl.metadata (3.9 kB)
00:49:06 Collecting asgiref>=3.8.1 (from Django<5.3,>=5.2.9->omero-web==5.30.2.dev0)
00:49:06 Using cached asgiref-3.11.0-py3-none-any.whl.metadata (9.3 kB)
00:49:06 Collecting sqlparse>=0.3.1 (from Django<5.3,>=5.2.9->omero-web==5.30.2.dev0)
00:49:06 Using cached sqlparse-0.5.5-py3-none-any.whl.metadata (4.7 kB)
00:49:06 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (1.4.4)
00:49:06 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (1.0.0)
00:49:06 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (2.4.1)
00:49:06 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (6.0.3)
00:49:06 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (3.6.5)
00:49:06 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (2.32.5)
00:49:06 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web==5.30.2.dev0) (65.5.1)
00:49:06 Collecting wheel (from django-pipeline->omero-web==5.30.2.dev0)
00:49:06 Using cached wheel-0.46.3-py3-none-any.whl.metadata (2.4 kB)
00:49:06 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.30.2.dev0) (3.4.4)
00:49:06 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.30.2.dev0) (3.11)
00:49:06 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.30.2.dev0) (2.6.3)
00:49:06 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.30.2.dev0) (2026.1.4)
00:49:06 Using cached django_cors_headers-3.7.0-py3-none-any.whl (12 kB)
00:49:06 Using cached django-5.2.10-py3-none-any.whl (8.3 MB)
00:49:06 Using cached asgiref-3.11.0-py3-none-any.whl (24 kB)
00:49:06 Using cached concurrent_log_handler-0.9.28-py3-none-any.whl (28 kB)
00:49:06 Downloading gunicorn-24.1.0-py3-none-any.whl (114 kB)
00:49:06 Using cached sqlparse-0.5.5-py3-none-any.whl (46 kB)
00:49:06 Using cached whitenoise-6.11.0-py3-none-any.whl (20 kB)
00:49:06 Using cached django_pipeline-4.1.0-py3-none-any.whl (75 kB)
00:49:06 Using cached importlib_resources-6.5.2-py3-none-any.whl (37 kB)
00:49:06 Using cached pytz-2025.2-py2.py3-none-any.whl (509 kB)
00:49:06 Using cached wheel-0.46.3-py3-none-any.whl (30 kB)
00:49:06 Building wheels for collected packages: omero-web
00:49:06 Building wheel for omero-web (pyproject.toml): started
00:49:07 Building wheel for omero-web (pyproject.toml): finished with status 'done'
00:49:07 Created wheel for omero-web: filename=omero_web-5.30.2.dev0-py3-none-any.whl size=2819316 sha256=37d821ae7956b01d74da9bfb6e69666184cdc082dc568678ab99e59d8f5ff7bd
00:49:07 Stored in directory: /home/omero/.cache/pip/wheels/22/8a/f9/2aa2b64b8351936989ad8693ee70db658c8360167f1ee574e7
00:49:07 Successfully built omero-web
00:49:07 Installing collected packages: pytz, whitenoise, wheel, sqlparse, importlib-resources, gunicorn, concurrent-log-handler, asgiref, django-pipeline, Django, django-cors-headers, omero-web
00:49:10
00:49:10 Successfully installed Django-5.2.10 asgiref-3.11.0 concurrent-log-handler-0.9.28 django-cors-headers-3.7.0 django-pipeline-4.1.0 gunicorn-24.1.0 importlib-resources-6.5.2 omero-web-5.30.2.dev0 pytz-2025.2 sqlparse-0.5.5 wheel-0.46.3 whitenoise-6.11.0
00:49:10 + wget https://raw.githubusercontent.com/snoopycrimecop/omero-figure/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
00:49:10 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:49:10 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:49:10 --2026-01-24 00:49:10-- https://raw.githubusercontent.com/snoopycrimecop/omero-figure/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
00:49:10 Resolving raw.githubusercontent.com (raw.githubusercontent.com)... 185.199.108.133, 185.199.109.133, 185.199.111.133, ...
00:49:10 Connecting to raw.githubusercontent.com (raw.githubusercontent.com)|185.199.108.133|:443... connected.
00:49:10 HTTP request sent, awaiting response... 200 OK
00:49:10 Length: 129238 (126K) [text/plain]
00:49:10 Saving to: ‘Figure_To_Pdf.py’
00:49:10
00:49:10 0K .......... .......... .......... .......... .......... 39% 3.91M 0s
00:49:10 50K .......... .......... .......... .......... .......... 79% 11.8M 0s
00:49:10 100K .......... .......... ...... 100% 5.67M=0.02s
00:49:10
00:49:10 2026-01-24 00:49:10 (5.83 MB/s) - ‘Figure_To_Pdf.py’ saved [129238/129238]
00:49:10
00:49:10 + chmod 755 Figure_To_Pdf.py
00:49:10 + mv Figure_To_Pdf.py /home/omero/workspace/OMERO-server/OMERO.server/lib/scripts/omero/figure_scripts
00:49:10 + omero config set omero.db.name OMERO-server
00:49:12 + omero config set omero.db.host pg
00:49:14 + omero config set omero.db.user postgres
00:49:16 + omero config set omero.data.dir /home/omero/omero-server-data
00:49:17 + omero config set omero.fs.repo.path %user%_%userId%/%thread%//%year%-%month%/%day%/%time%
00:49:19 + omero config set omero.db.poolsize 25
00:49:21 + omero config set omero.security.trustStore /etc/pki/ca-trust/extracted/java/cacerts
00:49:23 + omero config set omero.security.trustStorePassword changeit
00:49:25 + omero config set omero.mail.config true
00:49:27 + omero config set omero.server.nodedescriptors master:Blitz-0,Indexer-0,Processor-0,Storm,Tables-0
00:49:28 + omero config set omero.jvmcfg.append '--add-opens java.base/java.lang=ALL-UNNAMED --add-exports java.naming/com.sun.jndi.ldap=ALL-UNNAMED'
00:49:30 + omero certificates
00:49:32 OpenSSL 3.5.1 1 Jul 2025 (Library: OpenSSL 3.5.1 1 Jul 2025)
00:49:32 certificates created: /home/omero/omero-server-data/certs/server.pem /home/omero/omero-server-data/certs/server.p12
00:49:32 + '[' false = true ']'
00:49:32 + echo 'Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade'
00:49:32 Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade
00:49:32 + omego db -vvv upgrade --serverdir /home/omero/workspace/OMERO-server/OMERO.server --dbname OMERO-server
00:49:32 2026-01-24 00:49:32,895 [ omego.db] DEBUG dbcommand => upgrade
00:49:32 2026-01-24 00:49:32,895 [ omego.db] DEBUG dbhost => localhost
00:49:32 2026-01-24 00:49:32,895 [ omego.db] DEBUG dbname => OMERO-server
00:49:32 2026-01-24 00:49:32,895 [ omego.db] DEBUG dbpass => omero
00:49:32 2026-01-24 00:49:32,895 [ omego.db] DEBUG dbuser => omero
00:49:32 2026-01-24 00:49:32,895 [ omego.db] DEBUG rootpass => omero
00:49:32 2026-01-24 00:49:32,895 [ omego.db] DEBUG serverdir => /home/omero/workspace/OMERO-server/OMERO.server
00:49:32 2026-01-24 00:49:32,895 [omego.extern] INFO Executing : omero version
00:49:34 OMERO.py version:
00:49:34 OMERO.server version:
00:49:34 5.6.3-586-382a020f33-ice36-b32
00:49:34 5.22.0.dev0
00:49:34 2026-01-24 00:49:34,875 [omego.extern] INFO Completed [1.980 s]
00:49:34 2026-01-24 00:49:34,876 [omego.extern] DEBUG Using omero CLI from omero
00:49:34 2026-01-24 00:49:34,876 [ omego.db] INFO DbAdmin: DbAdmin /home/omero/workspace/OMERO-server/OMERO.server ...
00:49:34 2026-01-24 00:49:34,876 [omego.extern] INFO Running [current environment]: omero config get --show-password
00:49:34 2026-01-24 00:49:34,876 [omego.extern] INFO Executing : omero config get --show-password
00:49:36 2026-01-24 00:49:36,728 [omego.extern] INFO Completed [1.853 s]
00:49:36 2026-01-24 00:49:36,729 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero
00:49:36 2026-01-24 00:49:36,729 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t --version
00:49:36 2026-01-24 00:49:36,734 [omego.extern] INFO Completed [0.006 s]
00:49:36 2026-01-24 00:49:36,735 [ omego.db] DEBUG stdout: b'psql (PostgreSQL) 16.11\n'
00:49:36 2026-01-24 00:49:36,735 [ omego.db] INFO psql version: psql (PostgreSQL) 16.11
00:49:36
00:49:36 2026-01-24 00:49:36,735 [omego.extern] INFO Running [current environment]: omero config get --show-password
00:49:36 2026-01-24 00:49:36,735 [omego.extern] INFO Executing : omero config get --show-password
00:49:38 2026-01-24 00:49:38,617 [omego.extern] INFO Completed [1.882 s]
00:49:38 2026-01-24 00:49:38,617 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero
00:49:38 2026-01-24 00:49:38,617 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c \conninfo
00:49:38 2026-01-24 00:49:38,626 [omego.extern] INFO Completed [0.009 s]
00:49:38 2026-01-24 00:49:38,626 [ omego.db] DEBUG stdout: b'You are connected to database "OMERO-server" as user "postgres" on host "pg" (address "172.18.0.7") at port "5432".\n'
00:49:38 2026-01-24 00:49:38,626 [ omego.db] DEBUG Executing query: SELECT currentversion, currentpatch FROM dbpatch ORDER BY id DESC LIMIT 1
00:49:38 2026-01-24 00:49:38,626 [omego.extern] INFO Running [current environment]: omero config get --show-password
00:49:38 2026-01-24 00:49:38,627 [omego.extern] INFO Executing : omero config get --show-password
00:49:40 2026-01-24 00:49:40,488 [omego.extern] INFO Completed [1.862 s]
00:49:40 2026-01-24 00:49:40,488 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero
00:49:40 2026-01-24 00:49:40,489 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c SELECT currentversion, currentpatch FROM dbpatch ORDER BY id DESC LIMIT 1
00:49:40 2026-01-24 00:49:40,499 [omego.extern] INFO Completed [0.010 s]
00:49:40 2026-01-24 00:49:40,499 [ omego.db] DEBUG stdout: b'OMERO5.4|0\n'
00:49:40 2026-01-24 00:49:40,499 [ omego.db] INFO Current omero db version: ('OMERO5.4', '0')
00:49:40 2026-01-24 00:49:40,500 [ omego.db] INFO Database is already at OMERO5.4__0
00:49:40 + export LANG=en_US.UTF-8
00:49:40 + LANG=en_US.UTF-8
00:49:40 + export LANGUAGE=en_US:en
00:49:40 + LANGUAGE=en_US:en
00:49:40 + export LC_ALL=en_US.UTF-8
00:49:40 + LC_ALL=en_US.UTF-8
00:49:40 + BUILD_ID=DONT_KILL_ME
00:49:40 + omero admin start
00:49:45 No descriptor given. Using etc/grid/default.xml
00:49:52 Creating /home/omero/workspace/OMERO-server/OMERO.server/var/master
00:49:52 Initializing /home/omero/workspace/OMERO-server/OMERO.server/var/log
00:49:52 Creating /home/omero/workspace/OMERO-server/OMERO.server/var/registry
00:49:52 Waiting on startup. Use CTRL-C to exit
00:49:53 + omero admin waitup
00:49:54 Waiting on startup. Use CTRL-C to exit
00:49:55 + omero admin diagnostics
00:49:56
00:49:56 ================================================================================
00:49:56 OMERO Diagnostics (admin)
00:49:56 ================================================================================
00:49:56
00:49:56 Commands: java -version 17.0.17 (/usr/bin/java)
00:49:57 Commands: python -V 3.11.13 (/home/omero/workspace/OMERO-server/.venv3/bin/python)
00:49:57 Commands: icegridnode --version 3.6.5 (/opt/ice-3.6.5/bin/icegridnode)
00:49:57 Commands: icegridadmin --version 3.6.5 (/opt/ice-3.6.5/bin/icegridadmin)
00:49:57 Commands: psql --version 16.11 (/usr/bin/psql)
00:49:57 Commands: openssl version 3.5.11 (/usr/bin/openssl)
00:49:57
00:49:57 Component: OMERO.py 5.22.0.dev0
00:49:57 Component: OMERO.server 5.6.3-586-382a020f33-ice36-b32
00:49:57
00:49:57 Server: icegridnode running
00:49:57 Server: Blitz-0 active (pid = 57161, enabled)
00:49:57 Server: Indexer-0 activating (enabled)
00:49:57 Server: OMERO.Glacier2 active (pid = 57194, enabled)
00:49:57 Server: OMERO.IceStorm active (pid = 57222, enabled)
00:49:57 Server: Processor-0 active (pid = 57211, enabled)
00:49:57 Server: Tables-0 active (pid = 57223, enabled)
00:49:57
00:49:57 Log dir: /home/omero/workspace/OMERO-server/OMERO.server/var/log exists
00:49:57 Log files: Blitz-0.log 33.2 KB errors=0 warnings=1
00:49:57 Log files: DropBox.log n/a
00:49:57 Log files: FileServer.log n/a
00:49:57 Log files: Indexer-0.log 238 B
00:49:57 Log files: MonitorServer.log n/a
00:49:57 Log files: Processor-0.log 735 B
00:49:57 Log files: Tables-0.log 961 B
00:49:57 Log files: TestDropBox.log n/a
00:49:57 Log files: master.err empty
00:49:57 Log files: master.out 30.5 KB
00:49:57 Log files: Total size 0.07 MB
00:49:57
00:49:57
00:49:57 Environment:OMERO_HOME=(unset)
00:49:57 Environment:OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
00:49:57 Environment:OMERO_NODE=(unset)
00:49:57 Environment:OMERO_MASTER=(unset)
00:49:57 Environment:OMERO_USERDIR=(unset)
00:49:57 Environment:OMERO_TMPDIR=(unset)
00:49:57 Environment:PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:49:57 Environment:PYTHONPATH=(unset)
00:49:57 Environment:ICE_HOME=/opt/ice-3.6.5
00:49:57 Environment:LD_LIBRARY_PATH=(unset)
00:49:57 Environment:DYLD_LIBRARY_PATH=(unset)
00:49:57
00:49:57 OMERO SSL port:4064
00:49:57 OMERO TCP port:4063
00:49:57 OMERO data dir:'/home/omero/omero-server-data' Exists? True Is writable? True
00:49:57 OMERO temp dir:'/home/omero/omero/tmp' Exists? True Is writable? True (Size: 0)
00:49:57
00:49:57 JVM settings: Blitz-${index} -Xmx7200m
00:49:57 JVM settings: Indexer-${index} -Xmx4800m
00:49:57 JVM settings: PixelData-${index} -Xmx7200m
00:49:57 JVM settings: Repository-${index} -Xmx4800m
00:49:57
00:49:57 Jar: lib/server/formats-api.jar Bio-Formats API 8.5.0-SNAPSHOT 24 January 2026 041a1fc5ee509b47f793a0fa52bc0239ddf70a54
00:49:57 Jar: lib/server/formats-bsd.jar BSD Bio-Formats readers and writers 8.5.0-SNAPSHOT 24 January 2026 041a1fc5ee509b47f793a0fa52bc0239ddf70a54
00:49:57 Jar: lib/server/formats-gpl.jar Bio-Formats library 8.5.0-SNAPSHOT 24 January 2026 041a1fc5ee509b47f793a0fa52bc0239ddf70a54
00:49:57 Jar: lib/server/ome-codecs.jar OME Codecs 1.1.3-SNAPSHOT 24 January 2026 4cf299ba4b9ab40a682fd60b15f313ae2dd89349
00:49:57 Jar: lib/server/ome-common.jar OME Common Java 6.1.3-SNAPSHOT 24 January 2026 4cf299ba4b9ab40a682fd60b15f313ae2dd89349
00:49:57 Jar: lib/server/ome-jai.jar OME JAI 0.1.6-SNAPSHOT 24 January 2026 4cf299ba4b9ab40a682fd60b15f313ae2dd89349
00:49:57 Jar: lib/server/ome-mdbtools.jar MDB Tools (Java port) 5.3.5-SNAPSHOT 24 January 2026 4cf299ba4b9ab40a682fd60b15f313ae2dd89349
00:49:57 Jar: lib/server/ome-poi.jar OME POI 5.3.11-SNAPSHOT 24 January 2026 4cf299ba4b9ab40a682fd60b15f313ae2dd89349
00:49:57 Jar: lib/server/ome-xml.jar OME XML library 6.5.4-SNAPSHOT 24 January 2026 4cf299ba4b9ab40a682fd60b15f313ae2dd89349
00:49:57 Jar: lib/server/omero-blitz.jar jar 5.8.4-SNAPSHOT
00:49:57 Jar: lib/server/omero-common.jar jar 5.7.4-SNAPSHOT
00:49:57 Jar: lib/server/omero-gateway.jar jar 5.10.5-SNAPSHOT
00:49:57 Jar: lib/server/omero-model.jar jar 5.7.4-SNAPSHOT
00:49:57 Jar: lib/server/omero-renderer.jar jar 5.6.4-SNAPSHOT
00:49:57 Jar: lib/server/omero-romio.jar jar 5.8.4-SNAPSHOT
00:49:57 Jar: lib/server/omero-server.jar jar 5.7.4-SNAPSHOT
00:49:57 Jar: lib/server/omero-zarr-pixel-buffer-0.6.2-SNAPSHOT.jar OMERO Zarr Pixel Buffer 0.6.2-SNAPSHOT 13afc02a1b0b079bac43dab29fce848b63186ab0
00:49:57 + deactivate
00:49:57 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
00:49:57 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:49:57 + export PATH
00:49:57 + unset _OLD_VIRTUAL_PATH
00:49:57 + '[' -n '' ']'
00:49:57 + hash -r
00:49:57 + '[' -n '' ']'
00:49:57 + unset VIRTUAL_ENV
00:49:57 + unset VIRTUAL_ENV_PROMPT
00:49:57 + '[' '!' '' = nondestructive ']'
00:49:57 + unset -f deactivate
00:49:57 Finished: SUCCESS
