01:06:59 Started by upstream project "Trigger" build number 261
01:06:59 originally caused by:
01:06:59 Started by timer
01:06:59 Running as SYSTEM
01:06:59 Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-test-integration
01:06:59 [OMERO-test-integration] $ /bin/bash -xe /tmp/jenkins10095005463292541684.sh
01:06:59 + rm -rf /home/omero/workspace/OMERO-test-integration/.venv3
01:07:01 + python3 -m venv /home/omero/workspace/OMERO-test-integration/.venv3
01:07:05 + source /home/omero/workspace/OMERO-test-integration/.venv3/bin/activate
01:07:05 ++ deactivate nondestructive
01:07:05 ++ '[' -n '' ']'
01:07:05 ++ '[' -n '' ']'
01:07:05 ++ '[' -n /bin/bash -o -n '' ']'
01:07:05 ++ hash -r
01:07:05 ++ '[' -n '' ']'
01:07:05 ++ unset VIRTUAL_ENV
01:07:05 ++ '[' '!' nondestructive = nondestructive ']'
01:07:05 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-test-integration/.venv3
01:07:05 ++ export VIRTUAL_ENV
01:07:05 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:07:05 ++ PATH=/home/omero/workspace/OMERO-test-integration/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:07:05 ++ export PATH
01:07:05 ++ '[' -n '' ']'
01:07:05 ++ '[' -z '' ']'
01:07:05 ++ _OLD_VIRTUAL_PS1=
01:07:05 ++ PS1='(.venv3) '
01:07:05 ++ export PS1
01:07:05 ++ '[' -n /bin/bash -o -n '' ']'
01:07:05 ++ hash -r
01:07:05 + pip install https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl
01:07:05 Collecting zeroc-ice==3.6.5
01:07:06 Downloading https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl (31.3 MB)
01:07:08 Installing collected packages: zeroc-ice
01:07:09 Successfully installed zeroc-ice-3.6.5
01:07:09 + pip install -U pip future setuptools
01:07:09 Requirement already satisfied: pip in ./.venv3/lib/python3.9/site-packages (21.2.3)
01:07:11 Collecting pip
01:07:11 Using cached pip-24.2-py3-none-any.whl (1.8 MB)
01:07:11 Collecting future
01:07:11 Using cached future-1.0.0-py3-none-any.whl (491 kB)
01:07:11 Requirement already satisfied: setuptools in ./.venv3/lib/python3.9/site-packages (53.0.0)
01:07:11 Collecting setuptools
01:07:11 Using cached setuptools-75.2.0-py3-none-any.whl (1.2 MB)
01:07:12 Installing collected packages: setuptools, pip, future
01:07:12 Attempting uninstall: setuptools
01:07:12 Found existing installation: setuptools 53.0.0
01:07:12 Uninstalling setuptools-53.0.0:
01:07:12 Successfully uninstalled setuptools-53.0.0
01:07:13 Attempting uninstall: pip
01:07:13 Found existing installation: pip 21.2.3
01:07:13 Uninstalling pip-21.2.3:
01:07:13 Successfully uninstalled pip-21.2.3
01:07:14 Successfully installed future-1.0.0 pip-24.2 setuptools-75.2.0
01:07:14 + pip install markdown
01:07:15 Collecting markdown
01:07:15 Using cached Markdown-3.7-py3-none-any.whl.metadata (7.0 kB)
01:07:15 Collecting importlib-metadata>=4.4 (from markdown)
01:07:15 Using cached importlib_metadata-8.5.0-py3-none-any.whl.metadata (4.8 kB)
01:07:15 Collecting zipp>=3.20 (from importlib-metadata>=4.4->markdown)
01:07:15 Using cached zipp-3.20.2-py3-none-any.whl.metadata (3.7 kB)
01:07:15 Using cached Markdown-3.7-py3-none-any.whl (106 kB)
01:07:15 Using cached importlib_metadata-8.5.0-py3-none-any.whl (26 kB)
01:07:15 Using cached zipp-3.20.2-py3-none-any.whl (9.2 kB)
01:07:15 Installing collected packages: zipp, importlib-metadata, markdown
01:07:15 Successfully installed importlib-metadata-8.5.0 markdown-3.7 zipp-3.20.2
01:07:15 + pip install mox3 pytest pytest-django pytest-xdist pytest-mock
01:07:16 Collecting mox3
01:07:16 Using cached mox3-1.1.0-py3-none-any.whl.metadata (3.2 kB)
01:07:16 Collecting pytest
01:07:16 Using cached pytest-8.3.3-py3-none-any.whl.metadata (7.5 kB)
01:07:16 Collecting pytest-django
01:07:16 Using cached pytest_django-4.9.0-py3-none-any.whl.metadata (8.2 kB)
01:07:17 Collecting pytest-xdist
01:07:17 Using cached pytest_xdist-3.6.1-py3-none-any.whl.metadata (4.3 kB)
01:07:17 Collecting pytest-mock
01:07:17 Using cached pytest_mock-3.14.0-py3-none-any.whl.metadata (3.8 kB)
01:07:17 Collecting pbr!=2.1.0,>=2.0.0 (from mox3)
01:07:17 Using cached pbr-6.1.0-py2.py3-none-any.whl.metadata (3.4 kB)
01:07:17 Collecting fixtures>=3.0.0 (from mox3)
01:07:17 Using cached fixtures-4.1.0-py3-none-any.whl.metadata (21 kB)
01:07:17 Collecting iniconfig (from pytest)
01:07:17 Using cached iniconfig-2.0.0-py3-none-any.whl.metadata (2.6 kB)
01:07:17 Collecting packaging (from pytest)
01:07:17 Using cached packaging-24.1-py3-none-any.whl.metadata (3.2 kB)
01:07:17 Collecting pluggy<2,>=1.5 (from pytest)
01:07:17 Using cached pluggy-1.5.0-py3-none-any.whl.metadata (4.8 kB)
01:07:17 Collecting exceptiongroup>=1.0.0rc8 (from pytest)
01:07:17 Using cached exceptiongroup-1.2.2-py3-none-any.whl.metadata (6.6 kB)
01:07:17 Collecting tomli>=1 (from pytest)
01:07:17 Using cached tomli-2.0.2-py3-none-any.whl.metadata (10.0 kB)
01:07:17 Collecting execnet>=2.1 (from pytest-xdist)
01:07:17 Using cached execnet-2.1.1-py3-none-any.whl.metadata (2.9 kB)
01:07:17 Using cached mox3-1.1.0-py3-none-any.whl (43 kB)
01:07:17 Using cached pytest-8.3.3-py3-none-any.whl (342 kB)
01:07:17 Using cached pytest_django-4.9.0-py3-none-any.whl (23 kB)
01:07:17 Using cached pytest_xdist-3.6.1-py3-none-any.whl (46 kB)
01:07:17 Using cached pytest_mock-3.14.0-py3-none-any.whl (9.9 kB)
01:07:17 Using cached exceptiongroup-1.2.2-py3-none-any.whl (16 kB)
01:07:17 Using cached execnet-2.1.1-py3-none-any.whl (40 kB)
01:07:17 Using cached fixtures-4.1.0-py3-none-any.whl (64 kB)
01:07:17 Using cached pbr-6.1.0-py2.py3-none-any.whl (108 kB)
01:07:18 Using cached pluggy-1.5.0-py3-none-any.whl (20 kB)
01:07:18 Using cached tomli-2.0.2-py3-none-any.whl (13 kB)
01:07:18 Using cached iniconfig-2.0.0-py3-none-any.whl (5.9 kB)
01:07:18 Using cached packaging-24.1-py3-none-any.whl (53 kB)
01:07:18 Installing collected packages: tomli, pluggy, pbr, packaging, iniconfig, execnet, exceptiongroup, pytest, fixtures, pytest-xdist, pytest-mock, pytest-django, mox3
01:07:18 Successfully installed exceptiongroup-1.2.2 execnet-2.1.1 fixtures-4.1.0 iniconfig-2.0.0 mox3-1.1.0 packaging-24.1 pbr-6.1.0 pluggy-1.5.0 pytest-8.3.3 pytest-django-4.9.0 pytest-mock-3.14.0 pytest-xdist-3.6.1 tomli-2.0.2
01:07:19 + pip install tables
01:07:19 Collecting tables
01:07:19 Using cached tables-3.9.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.3 kB)
01:07:20 Collecting numpy>=1.19.0 (from tables)
01:07:20 Using cached numpy-2.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (60 kB)
01:07:20 Collecting numexpr>=2.6.2 (from tables)
01:07:20 Using cached numexpr-2.10.1-cp39-cp39-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (1.2 kB)
01:07:20 Requirement already satisfied: packaging in ./.venv3/lib/python3.9/site-packages (from tables) (24.1)
01:07:20 Collecting py-cpuinfo (from tables)
01:07:20 Using cached py_cpuinfo-9.0.0-py3-none-any.whl.metadata (794 bytes)
01:07:20 Collecting blosc2>=2.3.0 (from tables)
01:07:20 Using cached blosc2-2.5.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (9.2 kB)
01:07:20 Collecting ndindex>=1.4 (from blosc2>=2.3.0->tables)
01:07:21 Using cached ndindex-1.9.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.4 kB)
01:07:21 Collecting msgpack (from blosc2>=2.3.0->tables)
01:07:21 Using cached msgpack-1.1.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (8.4 kB)
01:07:21 Using cached tables-3.9.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (7.5 MB)
01:07:21 Using cached blosc2-2.5.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (4.4 MB)
01:07:21 Using cached numexpr-2.10.1-cp39-cp39-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (404 kB)
01:07:21 Using cached numpy-2.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (19.5 MB)
01:07:22 Using cached py_cpuinfo-9.0.0-py3-none-any.whl (22 kB)
01:07:22 Using cached ndindex-1.9.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (478 kB)
01:07:23 Using cached msgpack-1.1.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (377 kB)
01:07:23 Installing collected packages: py-cpuinfo, numpy, ndindex, msgpack, numexpr, blosc2, tables
01:07:27 Successfully installed blosc2-2.5.1 msgpack-1.1.0 ndindex-1.9.2 numexpr-2.10.1 numpy-2.0.2 py-cpuinfo-9.0.0 tables-3.9.2
01:07:27 + pip install jinja2
01:07:28 Collecting jinja2
01:07:28 Using cached jinja2-3.1.4-py3-none-any.whl.metadata (2.6 kB)
01:07:28 Collecting MarkupSafe>=2.0 (from jinja2)
01:07:28 Using cached MarkupSafe-3.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (4.0 kB)
01:07:28 Using cached jinja2-3.1.4-py3-none-any.whl (133 kB)
01:07:28 Using cached MarkupSafe-3.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (20 kB)
01:07:28 Installing collected packages: MarkupSafe, jinja2
01:07:28 Successfully installed MarkupSafe-3.0.2 jinja2-3.1.4
01:07:28 + pip install PyYAML
01:07:28 Collecting PyYAML
01:07:28 Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
01:07:28 Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB)
01:07:29 Installing collected packages: PyYAML
01:07:29 Successfully installed PyYAML-6.0.2
01:07:29 + pip install omero-py omero-web
01:07:29 Collecting omero-py
01:07:30 Using cached omero_py-5.19.5-py3-none-any.whl.metadata (6.3 kB)
01:07:30 Collecting omero-web
01:07:30 Using cached omero_web-5.27.2-py3-none-any.whl.metadata (6.4 kB)
01:07:30 Collecting urllib3<2 (from omero-py)
01:07:30 Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
01:07:30 Collecting appdirs (from omero-py)
01:07:30 Using cached appdirs-1.4.4-py2.py3-none-any.whl.metadata (9.0 kB)
01:07:30 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py) (1.0.0)
01:07:30 Collecting numpy<2 (from omero-py)
01:07:30 Using cached numpy-1.26.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (61 kB)
01:07:31 Collecting Pillow>=10.0.0 (from omero-py)
01:07:31 Using cached pillow-11.0.0-cp39-cp39-manylinux_2_28_x86_64.whl.metadata (9.1 kB)
01:07:31 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py) (6.0.2)
01:07:31 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py) (3.6.5)
01:07:31 Collecting requests (from omero-py)
01:07:31 Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB)
01:07:32 Collecting portalocker (from omero-py)
01:07:32 Using cached portalocker-2.10.1-py3-none-any.whl.metadata (8.5 kB)
01:07:32 Collecting concurrent-log-handler>=0.9.20 (from omero-web)
01:07:32 Using cached concurrent_log_handler-0.9.25-py3-none-any.whl.metadata (17 kB)
01:07:32 Collecting Django<4.3,>=4.2.3 (from omero-web)
01:07:32 Using cached Django-4.2.16-py3-none-any.whl.metadata (4.1 kB)
01:07:32 Collecting django-pipeline==2.1.0 (from omero-web)
01:07:32 Using cached django_pipeline-2.1.0-py3-none-any.whl.metadata (12 kB)
01:07:32 Collecting django-cors-headers==3.7.0 (from omero-web)
01:07:32 Using cached django_cors_headers-3.7.0-py3-none-any.whl.metadata (15 kB)
01:07:33 Collecting whitenoise>=5.3.0 (from omero-web)
01:07:33 Using cached whitenoise-6.7.0-py3-none-any.whl.metadata (3.7 kB)
01:07:33 Collecting gunicorn>=19.3 (from omero-web)
01:07:33 Using cached gunicorn-23.0.0-py3-none-any.whl.metadata (4.4 kB)
01:07:33 Collecting omero-marshal>=0.7.0 (from omero-web)
01:07:33 Using cached omero_marshal-0.9.0-py3-none-any.whl.metadata (2.2 kB)
01:07:33 Collecting pytz (from omero-web)
01:07:33 Using cached pytz-2024.2-py2.py3-none-any.whl.metadata (22 kB)
01:07:33 Requirement already satisfied: packaging in ./.venv3/lib/python3.9/site-packages (from omero-web) (24.1)
01:07:33 Collecting asgiref<4,>=3.6.0 (from Django<4.3,>=4.2.3->omero-web)
01:07:33 Using cached asgiref-3.8.1-py3-none-any.whl.metadata (9.3 kB)
01:07:33 Collecting sqlparse>=0.3.1 (from Django<4.3,>=4.2.3->omero-web)
01:07:33 Using cached sqlparse-0.5.1-py3-none-any.whl.metadata (3.9 kB)
01:07:33 Collecting charset-normalizer<4,>=2 (from requests->omero-py)
01:07:33 Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (34 kB)
01:07:33 Collecting idna<4,>=2.5 (from requests->omero-py)
01:07:33 Using cached idna-3.10-py3-none-any.whl.metadata (10 kB)
01:07:34 Collecting certifi>=2017.4.17 (from requests->omero-py)
01:07:34 Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB)
01:07:34 Collecting typing-extensions>=4 (from asgiref<4,>=3.6.0->Django<4.3,>=4.2.3->omero-web)
01:07:34 Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB)
01:07:34 Using cached omero_py-5.19.5-py3-none-any.whl (2.8 MB)
01:07:35 Using cached omero_web-5.27.2-py3-none-any.whl (2.8 MB)
01:07:35 Using cached django_cors_headers-3.7.0-py3-none-any.whl (12 kB)
01:07:35 Using cached django_pipeline-2.1.0-py3-none-any.whl (38 kB)
01:07:35 Using cached concurrent_log_handler-0.9.25-py3-none-any.whl (25 kB)
01:07:35 Using cached Django-4.2.16-py3-none-any.whl (8.0 MB)
01:07:35 Using cached gunicorn-23.0.0-py3-none-any.whl (85 kB)
01:07:35 Using cached numpy-1.26.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (18.2 MB)
01:07:36 Using cached omero_marshal-0.9.0-py3-none-any.whl (88 kB)
01:07:36 Using cached pillow-11.0.0-cp39-cp39-manylinux_2_28_x86_64.whl (4.4 MB)
01:07:36 Using cached portalocker-2.10.1-py3-none-any.whl (18 kB)
01:07:36 Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
01:07:37 Using cached whitenoise-6.7.0-py3-none-any.whl (19 kB)
01:07:37 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
01:07:37 Using cached pytz-2024.2-py2.py3-none-any.whl (508 kB)
01:07:37 Using cached requests-2.32.3-py3-none-any.whl (64 kB)
01:07:37 Using cached asgiref-3.8.1-py3-none-any.whl (23 kB)
01:07:37 Using cached certifi-2024.8.30-py3-none-any.whl (167 kB)
01:07:37 Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (144 kB)
01:07:37 Using cached idna-3.10-py3-none-any.whl (70 kB)
01:07:37 Using cached sqlparse-0.5.1-py3-none-any.whl (44 kB)
01:07:37 Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB)
01:07:37 Installing collected packages: pytz, django-pipeline, appdirs, whitenoise, urllib3, typing-extensions, sqlparse, portalocker, Pillow, omero-marshal, numpy, idna, gunicorn, charset-normalizer, certifi, requests, concurrent-log-handler, asgiref, omero-py, Django, django-cors-headers, omero-web
01:07:38 Attempting uninstall: numpy
01:07:38 Found existing installation: numpy 2.0.2
01:07:38 Uninstalling numpy-2.0.2:
01:07:38 Successfully uninstalled numpy-2.0.2
01:07:46 Successfully installed Django-4.2.16 Pillow-11.0.0 appdirs-1.4.4 asgiref-3.8.1 certifi-2024.8.30 charset-normalizer-3.4.0 concurrent-log-handler-0.9.25 django-cors-headers-3.7.0 django-pipeline-2.1.0 gunicorn-23.0.0 idna-3.10 numpy-1.26.4 omero-marshal-0.9.0 omero-py-5.19.5 omero-web-5.27.2 portalocker-2.10.1 pytz-2024.2 requests-2.32.3 sqlparse-0.5.1 typing-extensions-4.12.2 urllib3-1.26.20 whitenoise-6.7.0
01:07:46 [OMERO-test-integration] $ /bin/bash -xe /tmp/jenkins981683252511885995.sh
01:07:46 + source /home/settings.env
01:07:46 ++ OMERO_DB_HOST=pg
01:07:46 ++ OMERO_DB_USER=postgres
01:07:46 ++ OMERO_DB_PASS=
01:07:46 ++ OMERO_ROOT_PASS=omero
01:07:46 ++ OMERO_DATA_DIR=/OMERO
01:07:46 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
01:07:46 + OMERO_DB_NAME=OMERO-test-integration
01:07:46 + SRC=/home/omero/workspace/OMERO-test-integration/src
01:07:46 + OMERO_DIST=/home/omero/workspace/OMERO-test-integration/src/dist
01:07:46 + export OMERODIR=/home/omero/workspace/OMERO-test-integration/src/dist
01:07:46 + OMERODIR=/home/omero/workspace/OMERO-test-integration/src/dist
01:07:46 + '[' -e /home/omero/workspace/OMERO-test-integration/src/dist ']'
01:07:46 + source /home/omero/workspace/OMERO-test-integration/.venv3/bin/activate
01:07:46 ++ deactivate nondestructive
01:07:46 ++ '[' -n '' ']'
01:07:46 ++ '[' -n '' ']'
01:07:46 ++ '[' -n /bin/bash -o -n '' ']'
01:07:46 ++ hash -r
01:07:46 ++ '[' -n '' ']'
01:07:46 ++ unset VIRTUAL_ENV
01:07:46 ++ '[' '!' nondestructive = nondestructive ']'
01:07:46 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-test-integration/.venv3
01:07:46 ++ export VIRTUAL_ENV
01:07:46 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:07:46 ++ PATH=/home/omero/workspace/OMERO-test-integration/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:07:46 ++ export PATH
01:07:46 ++ '[' -n '' ']'
01:07:46 ++ '[' -z '' ']'
01:07:46 ++ _OLD_VIRTUAL_PS1=
01:07:46 ++ PS1='(.venv3) '
01:07:46 ++ export PS1
01:07:46 ++ '[' -n /bin/bash -o -n '' ']'
01:07:46 ++ hash -r
01:07:46 + omero admin stop
01:07:48 Waiting on shutdown. Use CTRL-C to exit
01:07:48 .+ deactivate
01:07:59 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
01:07:59 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:07:59 + export PATH
01:07:59 + unset _OLD_VIRTUAL_PATH
01:07:59 + '[' -n '' ']'
01:07:59 + '[' -n /bin/bash -o -n '' ']'
01:07:59 + hash -r
01:07:59 + '[' -n '' ']'
01:07:59 + unset VIRTUAL_ENV
01:07:59 + '[' '!' '' = nondestructive ']'
01:07:59 + unset -f deactivate
01:07:59 + sleep 5
01:08:04 + dropdb -f -h pg -U postgres OMERO-test-integration
01:08:05 + rm -rf /home/omero/workspace/OMERO-test-integration/config /home/omero/workspace/OMERO-test-integration/data /home/omero/workspace/OMERO-test-integration/omero-blitz-5.7.5-SNAPSHOT-python.zip /home/omero/workspace/OMERO-test-integration/omero_dropbox-5.7.1.dev0.tar.gz /home/omero/workspace/OMERO-test-integration/omero_marshal-0.9.1.dev0.tar.gz /home/omero/workspace/OMERO-test-integration/omero_py-5.19.6.dev0.tar.gz /home/omero/workspace/OMERO-test-integration/omero_scripts-5.8.4.dev0.tar.gz /home/omero/workspace/OMERO-test-integration/omero_web-5.27.3.dev0.tar.gz /home/omero/workspace/OMERO-test-integration/src /home/omero/workspace/OMERO-test-integration/version.properties
01:08:06 Copied 1 artifact from "OMERO-build" build number 217
01:08:06 Copied 5 artifacts from "OMERO-python-superbuild-build" build number 214
01:08:06 Copied 2 artifacts from "OMERO-build-build" build number 225
01:08:06 [OMERO-test-integration] $ /bin/bash -xe /tmp/jenkins154387468649975028.sh
01:08:06 + source /home/settings.env
01:08:06 ++ OMERO_DB_HOST=pg
01:08:06 ++ OMERO_DB_USER=postgres
01:08:06 ++ OMERO_DB_PASS=
01:08:06 ++ OMERO_ROOT_PASS=omero
01:08:06 ++ OMERO_DATA_DIR=/OMERO
01:08:06 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
01:08:06 + export ZIP_FILE=/home/omero/workspace/OMERO-test-integration/omero-blitz-VERSION-python.zip
01:08:06 + ZIP_FILE=/home/omero/workspace/OMERO-test-integration/omero-blitz-VERSION-python.zip
01:08:06 + export VERSION_PROPERTIES=/home/omero/workspace/OMERO-test-integration/version.properties
01:08:06 + VERSION_PROPERTIES=/home/omero/workspace/OMERO-test-integration/version.properties
01:08:06 + OMERO_DB_NAME=OMERO-test-integration
01:08:06 + OMERO_DATA_DIR=/home/omero/workspace/OMERO-test-integration/data
01:08:06 + mkdir -p /home/omero/workspace/OMERO-test-integration/data
01:08:06 + SRC=/home/omero/workspace/OMERO-test-integration/src
01:08:06 ++ ls openmicroscopy-5.6.3-513-85571adcc5-ice36.zip
01:08:06 + ZIP_SRC=openmicroscopy-5.6.3-513-85571adcc5-ice36.zip
01:08:06 + unzip openmicroscopy-5.6.3-513-85571adcc5-ice36.zip
01:08:06 Archive: openmicroscopy-5.6.3-513-85571adcc5-ice36.zip
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/.classpath-template
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/.github/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/.github/Pull_Request_Template.md
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/.github/workflows/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/.github/workflows/docker_build.yml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/.github/workflows/release.yml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/.github/workflows/source_build.yml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/.github/workflows/update.yaml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/.mailmap
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/.project
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/CMakeLists.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/CONTRIBUTING.md
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/Dockerfile
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/LICENSE.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/README.md
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/SUPPORT.md
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/build.bat
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/build.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/build.xml
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/antlib/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/antlib/.classpath
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/antlib/.project
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/antlib/resources/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/antlib/resources/excludebugs.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/antlib/resources/global.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/antlib/resources/hibernate.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/antlib/resources/lifecycle.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/antlib/resources/version.xml
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/antlib/scripts/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/antlib/scripts/parse_version
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/antlib/scripts/source-archive.py
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/build.xml
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/README.md
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/build.xml
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/plugins/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/plugins/robot.py
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/resources/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/resources/robot.template
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/resources/web/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/resources/web/annotation.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/resources/web/login.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/resources/web/thumbs.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/resources/web/tree.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/resources/web/webadmin.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/resources/well_sample_posXY.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/robot_setup.sh
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/web/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/web/annotate_test.robot
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/web/center_right_panel_test.robot
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/web/create_scenario.robot
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/web/delete_test.robot
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/web/download_options_test.robot
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/web/filter_test.robot
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/web/forms_test.robot
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/web/history_test.robot
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/web/map_annotations_test.robot
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/web/post_copy_test.robot
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/web/post_cut_test.robot
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/web/post_drag_test.robot
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/web/post_manage_test.robot
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/web/rdef_test.robot
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/web/search.robot
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/web/search_annotation_test.robot
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/web/show_test.robot
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/web/spw_test.robot
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/web/tagging_test.robot
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/web/view_image.robot
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/web/webadmin_create_group_and_user.robot
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/web/webadmin_login.robot
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tests/ui/testcases/web/webadmin_user_settings.robot
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/CMakeLists.txt
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/cmake/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/cmake/CompilerChecks.cmake
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/cmake/FindIce.cmake
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/cmake/GTest.cmake
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/cmake/TemplateCmdConfig.cmake.in
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/cmake/TemplateConfig.cmake.in
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/cmake/TemplateShellConfig.cmake.in
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/cmake/Version.cmake
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/CHANGES
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/CMakeLists.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/CONTRIBUTORS
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/LICENSE
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/README
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/cmake/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/cmake/internal_utils.cmake
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-death-test.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-message.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-param-test.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-param-test.h.pump
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-printers.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-spi.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-test-part.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-typed-test.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest_pred_impl.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest_prod.h
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-death-test-internal.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-filepath.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-internal.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-linked_ptr.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-param-util-generated.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-param-util-generated.h.pump
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-param-util.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-port.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-string.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-tuple.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-tuple.h.pump
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-type-util.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-type-util.h.pump
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/prime_tables.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample1.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample1.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample10_unittest.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample1_unittest.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample2.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample2.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample2_unittest.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample3-inl.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample3_unittest.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample4.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample4.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample4_unittest.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample5_unittest.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample6_unittest.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample7_unittest.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample8_unittest.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample9_unittest.cc
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/scripts/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/scripts/fuse_gtest_files.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/scripts/gen_gtest_pred_impl.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/scripts/gtest-config.in
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/scripts/pump.py
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/scripts/test/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/scripts/test/Makefile
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/src/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-all.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-death-test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-filepath.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-internal-inl.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-port.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-printers.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-test-part.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-typed-test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest_main.cc
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-death-test_ex_test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-death-test_test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-filepath_test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-linked_ptr_test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-listener_test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-message_test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-options_test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-param-test2_test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-param-test_test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-param-test_test.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-port_test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-printers_test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-test-part_test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-tuple_test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-typed-test2_test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-typed-test_test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-typed-test_test.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-unittest-api_test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_all_test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_break_on_failure_unittest.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_break_on_failure_unittest_.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_catch_exceptions_test.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_catch_exceptions_test_.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_color_test.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_color_test_.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_env_var_test.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_env_var_test_.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_environment_test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_filter_unittest.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_filter_unittest_.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_help_test.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_help_test_.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_list_tests_unittest.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_list_tests_unittest_.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_main_unittest.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_no_test_unittest.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_output_test.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_output_test_.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_output_test_golden_lin.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_pred_impl_unittest.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_premature_exit_test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_prod_test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_repeat_test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_shuffle_test.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_shuffle_test_.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_sole_header_test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_stress_test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_test_utils.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_throw_on_failure_ex_test.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_throw_on_failure_test.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_throw_on_failure_test_.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_uninitialized_test.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_uninitialized_test_.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_unittest.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_xml_outfile1_test_.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_xml_outfile2_test_.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_xml_outfiles_test.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_xml_output_unittest.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_xml_output_unittest_.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_xml_test_utils.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/production.cc
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/production.h
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/README.h
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/ClientErrors.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/ClientErrors.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/IceNoWarnPop.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/IceNoWarnPush.h
01:08:06 extracting: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/IcePortPop.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/IcePortPush.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/ObjectFactory.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/ObjectFactory.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/ObjectFactoryRegistrar.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/ObjectFactoryRegistrar.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/RTypesI.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/RTypesI.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/all.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/callbacks.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/callbacks.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/client.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/client.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/clientF.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/clientF.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/conversions.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/conversions.h
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/internal/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/internal/fixes.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/min.h
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/model/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/model/DetailsI.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/model/DetailsI.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/model/ElectricPotentialI.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/model/ElectricPotentialI.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/model/FrequencyI.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/model/FrequencyI.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/model/LengthI.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/model/LengthI.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/model/ObjectFactory.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/model/PermissionsI.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/model/PermissionsI.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/model/PowerI.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/model/PowerI.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/model/PressureI.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/model/PressureI.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/model/TemperatureI.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/model/TemperatureI.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/model/TimeI.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/model/TimeI.h
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/sys/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/sys/ParametersI.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/sys/ParametersI.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/templates.h
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/util/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/util/concurrency.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/util/concurrency.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/util/tiles.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/util/tiles.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/util/uuid.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/src/omero/util/uuid.h
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/CMakeLists.txt
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/integration/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/integration/CMakeLists.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/integration/ClientUsageTest.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/integration/admin.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/integration/annotations.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/integration/api.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/integration/beta3.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/integration/chgrp.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/integration/cmdcallbacktest.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/integration/counts.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/integration/delete.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/integration/guest.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/integration/mapannotation.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/integration/model51.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/integration/permissions.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/integration/rendering_settings_test.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/integration/search.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/integration/sessions.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/main.cpp
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/omero/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/omero/CMakeLists.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/omero/fixture.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/omero/fixture.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/safegtest.h
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/unit/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/unit/CMakeLists.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/unit/client.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/unit/concurrency.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/unit/conversions.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/unit/model.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/unit/operators.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/unit/parameters.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/unit/perms.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/unit/rtypes.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/test/unit/units.cpp
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/utils/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/utils/CMakeLists.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/utils/chgrp.cpp
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroFS/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroFS/build.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroFS/ivy.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroFS/setup.py
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroFS/test/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroFS/test/drivers.py
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroFS/test/integration/
01:08:06 extracting: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroFS/test/integration/__init__.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroFS/test/integration/test_dbclient.py
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroFS/test/records/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroFS/test/records/first.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroFS/test/records/outofsync.txt
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/.classpath-template
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/.project
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/build.gradle
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/build.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/ivy.xml
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/resources/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/settings.gradle
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test.xml
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/fs.testng.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/gateway.testng.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration.testng.xml
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/AbstractServerImportTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/AbstractServerTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/AbstractTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/AdminServiceTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/AgentTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/BfPixelBufferTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/BlockSizeTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/ClientUsageTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/CmdCallbackTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/ConfigurationServiceTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/CreatePojosFixture2.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/DeleteServicePermissionsTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/DeleteServiceTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/DiskUsageTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/DuplicationTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/ExporterTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/ExtendedAnnotationTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/FindParentsChildrenTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/ImportAsTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/ImportLibraryTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/ImporterTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/LegalGraphTargetsTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/LightAdminPrivilegesTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/LightAdminRolesTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/MapAnnotationTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/MetadataServiceTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/ModelMockFactory.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/PermissionsTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/PermissionsTestAll.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/PixelsServiceTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/PojosServiceTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/ProjectionServiceTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/PyramidMinMaxTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/RawFileStoreTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/RawPixelsStoreTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/RenderingEngineTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/RenderingSettingsServicePermissionsTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/RenderingSettingsServiceTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/RepositoryServiceTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/ResetPasswordTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/RoiServiceTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/RolesTests.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/ScriptServiceTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/TableTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/UpdateServiceTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/UpgradeCheckTest.java
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/chgrp/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/chgrp/AnnotationMoveTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveAndPermissionsTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveCombinedDataTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveDatasetTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveImageWithAcquisitionDataTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveImageWithRoiFromOtherUserTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveImageWithRoiTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/chgrp/MultiImageFilesetMoveTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/chgrp/RenderingSettingsMoveTest.java
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/chmod/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/chmod/PermissionsTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/chmod/RolesTest.java
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/chown/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/chown/PermissionsTest.java
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/delete/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/delete/AdditionalDeleteTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/delete/DeleteProjectedImageTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/delete/HierarchyDeleteTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/delete/MultiImageFilesetDeleteTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/delete/SpwDeleteTest.java
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/gateway/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/gateway/AdminFacilityTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/gateway/BrowseFacilityTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/gateway/DataManagerFacilityTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/gateway/GatewayTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/gateway/GatewayUsageTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/gateway/LoadFacilityTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/gateway/MetadataFacilityTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/gateway/ROIFacilityTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/gateway/RawDataFacilityTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/gateway/SearchFacilityTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/gateway/TablesFacilityTest.java
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/thumbnail/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/thumbnail/BatchLoadingTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/thumbnail/SingleFileTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/thumbnail/SkipThumbnailsPermissionsTest.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroJava/test/integration/thumbnail/Utils.java
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/bin/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/bin/omero
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/bin/omero.bat
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/bin/setpythonpath.bat
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/bin/winconfig.bat
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/build.xml
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/examples/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/examples/createSession.py
01:08:06 extracting: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/examples/load.omero
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/examples/projection_1.py
01:08:06 extracting: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/examples/submit.omero
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/examples/upload.omero
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/ice.config
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/ivy.xml
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/manualtests/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/manualtests/README.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/manualtests/populate_roi_test.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/setup.py
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/
01:08:06 extracting: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/__init__.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/conftest.py
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/
01:08:06 extracting: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/__init__.py
01:08:06 extracting: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/client_ctors.cfg
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/
01:08:06 extracting: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/__init__.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/cli.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/test_admin.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/test_chgrp.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/test_chown.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/test_cleanse.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/test_db.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/test_delete.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/test_download.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/test_duplicate.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/test_fs.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/test_group.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/test_import.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/test_import_bulk.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/test_ldap.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/test_metadata.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/test_obj.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/test_pyramids.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/test_script.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/test_search.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/test_sessions.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/test_tag.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/test_upload.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/clitest/test_user.py
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/fstest/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/fstest/test_rename.py
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/__init__.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/test_annotation.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/test_chgrp.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/test_chmod.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/test_chown.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/test_config_service.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/test_connection.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/test_delete.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/test_fs.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/test_get_objects.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/test_helpers.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/test_image.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/test_image_wrapper.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/test_missing_pyramid.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/test_multi_group.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/test_performance.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/test_permissions.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/test_pixels.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/test_plate_wrapper.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/test_rdefs.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/test_search_objects.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/test_services.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/test_ticket10618.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/test_user.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/gatewaytest/test_wrapper.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/helpers.py
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/metadata/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/metadata/bulk_to_map_annotation_context.yml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/metadata/bulk_to_map_annotation_context_ns.csv
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/metadata/bulk_to_map_annotation_context_ns.yml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/metadata/bulk_to_map_annotation_context_ns2.yml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/metadata/bulk_to_map_annotation_context_ns2_empty.yml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/metadata/bulk_to_map_annotation_context_ns2_fail.yml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/metadata/test_metadata_mapannotations.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/metadata/test_populate.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/metadata/test_pydict_text.py
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/scriptsharness/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/scriptsharness/definition.cfg
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/scriptsharness/definition.py
01:08:06 extracting: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/scriptsharness/simple_script.cfg
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/scriptsharness/simple_script.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/scriptsharness/test_harness.py
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/scriptstest/
01:08:06 extracting: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/scriptstest/__init__.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/scriptstest/script.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/scriptstest/test_cli.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/scriptstest/test_coverage.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/scriptstest/test_inputs.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/scriptstest/test_ping.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/scriptstest/test_rand.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/scriptstest/test_repo.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/scriptstest/test_roi_handling_utils.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/scriptstest/test_script_utils.py
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/tablestest/
01:08:06 extracting: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/tablestest/service-reference-dev_4_4_5.h5.bz2
01:08:06 extracting: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/tablestest/service-reference-dev_5_3_4.h5.bz2
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/tablestest/test_backwards_compatibility.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/tablestest/test_populate_metadata.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/tablestest/test_service.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/tablestest/test_tables.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_admin.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_annotation.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_annotationPermissions.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_chgrp.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_chmod.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_chown.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_client_ctors.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_clientusage.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_cmdcallback.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_counts.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_delete.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_exporter.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_files.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_iconfig.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_icontainer.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_ildap.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_imetadata.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_iquery.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_isession.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_ishare.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_itimeline.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_itypes.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_iupdate.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_librarytest.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_mail.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_mapannotation.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_metadatastore.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_model51.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_permissions.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_pixelsService.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_rawfilestore.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_rawpixelsstore.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_reimport.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_render.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_reporawfilestore.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_repository.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_rois.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_scripts.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_search.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_simple.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_thumbnailPerms.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_thumbs.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_tickets1000.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_tickets2000.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_tickets3000.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_tickets4000.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_tickets6000.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroPy/test/integration/test_util.py
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/README.rst
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/build.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/setup.py
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/conftest.py
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_annotate.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_api_containers.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_api_errors.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_api_experimenters_groups.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_api_images.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_api_login.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_api_projects.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_api_rois.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_api_wells.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_chgrp.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_chown.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_config.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_containers.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_csrf.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_decorators.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_download.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_groups_users.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_histogram.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_history.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_links.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_login.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_marshal.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_metadata.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_plategrid.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_rendering.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_scripts.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_show.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_simple.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_table.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_tags.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_thumbnails.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_tree.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_tree_annotations.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroWeb/test/integration/test_webadmin.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/build.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/bump_version.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/common.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/pytest.ini
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/python.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/travis-build
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/headers.txt
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/hudson/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/hudson/OMERO.sh
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/hudson/README.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/hudson/functions.sh
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/images/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/images/block-diagram.svg
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/images/build/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/images/build/build_files.dot
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/images/build/build_files.png
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/images/build/build_files.svg
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/images/build/newbuild.dot
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/install/
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/install/VM/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/install/VM/README.md
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/install/python_deps.sh
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/overview.html
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/package-template.html
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/sequencediagrams/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/sequencediagrams/Sessions.ods
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/sphinx-api/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/sphinx-api/Makefile
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/sphinx-api/build.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/sphinx-api/conf.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/sphinx-api/index.rst
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/sphinx-api/rules.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/sphinx-api/sphinx.xml
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/sphinx-api/themes/
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/sphinx-api/themes/api_theme/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/sphinx-api/themes/api_theme/layout.html
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/sphinx-api/themes/api_theme/static/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/sphinx-api/themes/api_theme/static/api_style.css_t
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/sphinx-api/themes/api_theme/theme.conf
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/styles/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/styles/CodeTemplate.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/styles/CodeTemplate.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/styles/OMERO_Eclipse_Code_Style.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/styles/README.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/styles/checkstyle.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/docs/styles/headers.xml
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/backup.cfg
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/blitz/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/blitz/mail-senders.example
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/blitz/mail-server.example
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/build.properties
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/env.bat
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/env.sh
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/hibernate.properties
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/ice.config
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/ivysettings.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/logback-cli.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/logback-indexing-cli.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/logback-indexing.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/logback.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/mime.types
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/node1.cfg
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/node2.cfg
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/omero.properties
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/profiles/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/profiles/psql
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/rollover.cfg
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/templates/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/templates/Windows.cfg
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/templates/error/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/templates/error/maintainance.html
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/templates/grid/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/templates/grid/README
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/templates/grid/default.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/templates/grid/templates.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/templates/grid/windefault.xml
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/templates/ice.config
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/templates/internal.cfg
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/templates/master.cfg
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/etc/testdropbox.config
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/CMakeLists.txt
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Delete/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Delete/CMakeLists.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Delete/Callback.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Delete/Callback.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Delete/Callback.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Delete/FileAnnotationDelete.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Delete/FileAnnotationDelete.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Delete/Options.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Delete/Options.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Delete/Options.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Delete/Subclass.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Delete/Subclass.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Delete/Subclass.py
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/CMakeLists.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/clientpointer.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/collectionmethods.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/collectionmethods.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/collectionmethods.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/collectionmethods.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/configuration.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/configuration.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/configuration.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/configuration.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/constants.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/constants.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/constants.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/constants.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/constructors.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/constructors.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/constructors.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/constructors.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/details.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/details.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/details.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/details.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/enumerations.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/enumerations.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/enumerations.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/enumerations.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/getsetattr.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/interfaces.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/interfaces.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/interfaces.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/iterators.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/iterators.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/iterators.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/iterators.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/lists.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/lists.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/primitives.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/primitives.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/primitives.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/primitives.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/queries.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/queries.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/queries.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/queries.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/rcollection.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/rcollection.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/rcollection.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/rcollection.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/smartpointers.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/staticfields.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/staticfields.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/staticfields.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/staticfields.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/sudo.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/sudo.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/sudo.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/sudo.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/timeout.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/timeout.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/unloaded.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/unloaded.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/unloaded.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/unloaded.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/updates.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/updates.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/updates.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroClients/updates.py
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroTables/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroTables/FindMeasurements.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroTables/MeasurementTable.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroTables/first.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/OmeroTables/iroi.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/README.txt
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/RegionsOfInterest/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/RegionsOfInterest/CMakeLists.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/RegionsOfInterest/Main.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/RegionsOfInterest/Main.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/RegionsOfInterest/Main.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/RegionsOfInterest/SConscript
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/SConstruct
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/ScreenPlateWell/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/ScreenPlateWell/imagesperwell.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/ScreenPlateWell/imagesperwell.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/ScreenPlateWell/listplates.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/ScreenPlateWell/listplates.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/ScreenPlateWell/platebybarcode.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/ScreenPlateWell/platecodebyimage.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/ScreenPlateWell/platecodebyimage.py
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/ScriptingService/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/ScriptingService/Edit_Descriptions.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/ScriptingService/HelloWorld.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/ScriptingService/NativeWrapperExample.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/ScriptingService/Notifications.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/ScriptingService/Notifications.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/ScriptingService/adminWorkflow.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/ScriptingService/runHelloWorld.py
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/java/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/java/.classpath
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/java/.project
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/java/src/
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/java/src/training/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/java/src/training/CreateImage.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/java/src/training/DeleteData.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/java/src/training/HowToUseTables.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/java/src/training/LoadMetadataAdvanced.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/java/src/training/ROIFolders.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/java/src/training/ROIs.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/java/src/training/RawDataAccess.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/java/src/training/ReadData.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/java/src/training/ReadDataAdvanced.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/java/src/training/RenderImages.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/java/src/training/Setup.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/java/src/training/Sudo.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/java/src/training/WriteData.java
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/javascript/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/javascript/index.html
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/javascript/utils.js
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/markup.py
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/matlab/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/matlab/ConnectToOMERO.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/matlab/CreateImage.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/matlab/DeleteData.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/matlab/Filesets.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/matlab/LoadMetadataAdvanced.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/matlab/ROIs.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/matlab/RawDataAccess.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/matlab/ReadData.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/matlab/ReadDataAdvanced.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/matlab/RenderImages.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/matlab/WriteData.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/matlab/exampleSuite.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/matlab/parseOmeroProperties.m
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Advanced/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Advanced/Create_Image_advanced.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Advanced/Raw_Data_advanced.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Advanced/Read_Data_advanced.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Advanced/Write_data_advanced.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Bulk_Shapes.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Connect_To_OMERO.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Create_Image.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Delete.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Filesets.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Groups_Permissions.py
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Json_Api/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Json_Api/Login.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Metadata.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Parse_OMERO_Properties.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/ROIs.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Raw_Data_Access.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Read_Data.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Render_Images.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Scripting_Service_Example.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Tables.py
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Task_Scripts/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Task_Scripts/ROIs_To_Table.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Task_Scripts/Raw_Data2.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Task_Scripts/Raw_Data_Task.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Task_Scripts/Write_Data_3.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Task_Scripts/Write_Data_4.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/Write_Data.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/python/__main__.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/Training/training_setup.sh
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/TreeList/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/TreeList/AllProjects.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/TreeList/AllProjects.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/TreeList/AllProjects.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/TreeList/AllProjects.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/TreeList/CMakeLists.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/TreeList/Main.cpp
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/TreeList/Main.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/TreeList/Main.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/TreeList/Main.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/TreeList/PrintProjects.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/TreeList/PrintProjects.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/TreeList/PrintProjects.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/TreeList/PrintProjects.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/TreeList/SConscript
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/TreeList/Usage.h
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/TreeList/Usage.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/TreeList/Usage.m
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/examples/TreeList/Usage.py
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/history.rst
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/ivy.xml
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/IVY1016/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/IVY1016/EclipseClasspath.class
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/IVY1016/EclipseClasspath.java
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/LICENSE-ASM.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/LICENSE-AppleJavaExtensions.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/LICENSE-bcel.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/LICENSE-docbook.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/LICENSE-dom4j.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/LICENSE-jcip.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/LICENSE.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/README.txt
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/lib/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/lib/annotations.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/lib/asm-3.0.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/lib/asm-analysis-3.0.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/lib/asm-commons-3.0.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/lib/asm-tree-3.0.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/lib/asm-util-3.0.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/lib/asm-xml-3.0.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/lib/bcel.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/lib/buggy.icns
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/lib/dom4j-full.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/lib/findbugs.jar
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/plugin/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/plugin/coreplugin.jar
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/src/
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/src/xsl/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/src/xsl/default.xsl
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/src/xsl/fancy-hist.xsl
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/src/xsl/fancy.xsl
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/src/xsl/plain.xsl
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/findbugs-1.2.1/src/xsl/summary.xsl
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/keystore
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/README
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/agpl.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/antlr.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/apache-v1.1.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/apache-v2.0.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/asm.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/bouncy_castle_license.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/bsd.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/cddl-v1.0.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/cpl-v10.html
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/crystalclear.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/django.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/dom4j.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/epl-v1.0.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/fbsd.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/freemarker.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/gpl-v2.0.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/gpl.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/gtest.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/iconsweets_license.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/jamon.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/jmock.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/jquery.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/jtidy.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/lgpl-3.0.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/lgpl-v2.0.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/lgpl-v2.1.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/lgpl-v3.0.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/lgpl.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/matplotlib.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/mit.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/mpl-v1_0.htm
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/npl-1_1.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/path.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/pil.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/postgresql.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/psf-v2.0.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/psf-v2.5.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/scons.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/slf4j.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/tablelayout.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/which.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/zlib-libpng.txt
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/licenses/zpl-v2.1.txt
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/linux-native/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/linux-native/libnativewindow_jvm.so
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/linux64-native/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/linux64-native/libnativewindow_jvm.so
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/logback-build.xml
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/patches/
01:08:06 extracting: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/patches/hibernate-3.5-ColumnTransformer.patch.gz
01:08:06 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/JHotDraw-7.0.9.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/TableLayout-bin-jdk1.5-2009-08-26.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/ant-1.8.0.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/ant-contrib-1.0b3.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/ant-junit-1.8.0.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/ant-launcher-1.8.0.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/ant-nodeps-1.8.0.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/ant-trax-1.8.0.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/batik-all-1.8pre-jdk6.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/bufr-1.1.00.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/checkstyle-4.3.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/commons-validator-1.3.1.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/findbugs-ant-1.2.1.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/geronimo-spec-jta-1.0.1B-rc4.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/grib-5.1.03.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/hibernate-core-3.5.6-4510.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/hibernate-jpa-2.0-api-1.0.0.Final.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/hibernate-search-3.1.1.GA.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/hibernate-tools-3.2.0.beta11.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/hibernate-validator-3.1.0.GA.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/ipython-1.2.1.tar.gz
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/ivy-2.4.0.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/omero-icemock-3.5.1.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/omero-icemock-3.6.3.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/omero.java
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/oro-2.0.8.jar
01:08:06 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/lib/repository/scons-local-2.1.0.zip
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/3-3-2_rgb.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/fire.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/glasbey.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/glasbey_inverted.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/glow.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/grays.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/ice.lut
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/janelia/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/janelia/pup_br.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/janelia/pup_nr.lut
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/ncsa_paledit/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/ncsa_paledit/16_colors.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/ncsa_paledit/5_ramps.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/ncsa_paledit/6_shades.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/ncsa_paledit/blue_orange_icb.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/ncsa_paledit/brgbcmyw.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/ncsa_paledit/cool.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/ncsa_paledit/edges.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/ncsa_paledit/gem.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/ncsa_paledit/phase.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/ncsa_paledit/royal.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/ncsa_paledit/sepia.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/ncsa_paledit/smart.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/ncsa_paledit/thal.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/ncsa_paledit/thallium.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/ncsa_paledit/unionjack.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/physics.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/red-green.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/spectrum.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/thermal.lut
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/wcif/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/wcif/cyan_hot.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/wcif/green_fire_blue.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/wcif/hilo.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/wcif/ica.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/wcif/ica2.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/wcif/ica3.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/wcif/magenta_hot.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/wcif/orange_hot.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/wcif/rainbow_rgb.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/wcif/red_hot.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/luts/wcif/yellow_hot.lut
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/omero.class
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/setup.cfg
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/README.txt
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/misc/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/misc/Makefile
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/misc/current.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/misc/enums.py
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__1/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__1/OMERO3__7.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__10/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__10/OMERO3A__9.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__11/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__11/OMERO3A__10.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__11/OMERO3A__5.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__2/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__2/OMERO3A__1.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__3/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__3/OMERO3A__2.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__3/OMERO3__5.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__4/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__4/OMERO3A__3.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__4/OMERO3__5.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__5/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__5/OMERO3A__4.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__6/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__6/OMERO3A__5.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__7/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__7/OMERO3A__6.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__8/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__8/OMERO3A__6.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__9/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3A__9/OMERO3A__8.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3__4/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3__4/OMERO3__1.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3__5/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3__5/OMERO3__4.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3__6/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3__6/OMERO3__5.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3__7/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO3__7/OMERO3__6.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO4.1__0/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO4.1__0/OMERO4__0.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO4.2__0/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO4.2__0/OMERO4.1__0.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO4.2__0/t/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO4.2__0/t/OMERO4.1__0.py
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO4.2__0/t/OMERO4.1__0.test
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO4.3__0/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO4.3__0/OMERO4.2__0.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO4.3__0/omero-4.2-data-fix.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO4.4__0/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO4.4__0/OMERO4.1__0.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO4.4__0/OMERO4.3__0.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO4__0/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO4__0/OMERO3A__11.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.0__0/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-fix.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-list.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.0__0/OMERO4.4__0.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.1__1/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.1__1/OMERO5.0__0.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.1__1/OMERO5.1__0.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.2__0/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.2__0/OMERO5.1__1.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.3__0/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.3__0/OMERO5.2__0.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.3__0/delete-ns-orphans.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.3__0/reverse_shape_color_argb_to_rgba.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.4DEV__1/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.4DEV__2/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.4DEV__3/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql
01:08:07 creating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.4__0/
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.4__0/OMERO5.3__0.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.4__0/OMERO5.3__1.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.4__0/psql-footer.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.4__0/psql-header.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.4__0/schema.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/sql/psql/OMERO5.4__0/views.sql
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/test.xml
01:08:07 inflating: openmicroscopy-5.6.3-513-85571adcc5-ice36/update_dependencies.sh
01:08:07 extracting: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/antlib/resources/gitversion.xml
01:08:07 extracting: openmicroscopy-5.6.3-513-85571adcc5-ice36/components/tools/OmeroCpp/cmake/GitVersion.cmake
01:08:07 + rm -f openmicroscopy-5.6.3-513-85571adcc5-ice36.zip
01:08:07 + mv /home/omero/workspace/OMERO-test-integration/openmicroscopy-5.6.3-513-85571adcc5-ice36 /home/omero/workspace/OMERO-test-integration/src
01:08:07 + source /home/omero/workspace/OMERO-test-integration/.venv3/bin/activate
01:08:07 ++ deactivate nondestructive
01:08:07 ++ '[' -n '' ']'
01:08:07 ++ '[' -n '' ']'
01:08:07 ++ '[' -n /bin/bash -o -n '' ']'
01:08:07 ++ hash -r
01:08:07 ++ '[' -n '' ']'
01:08:07 ++ unset VIRTUAL_ENV
01:08:07 ++ '[' '!' nondestructive = nondestructive ']'
01:08:07 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-test-integration/.venv3
01:08:07 ++ export VIRTUAL_ENV
01:08:07 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:08:07 ++ PATH=/home/omero/workspace/OMERO-test-integration/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:08:07 ++ export PATH
01:08:07 ++ '[' -n '' ']'
01:08:07 ++ '[' -z '' ']'
01:08:07 ++ _OLD_VIRTUAL_PS1=
01:08:07 ++ PS1='(.venv3) '
01:08:07 ++ export PS1
01:08:07 ++ '[' -n /bin/bash -o -n '' ']'
01:08:07 ++ hash -r
01:08:07 + for x in *.tar.gz
01:08:07 + pip install -U omero_dropbox-5.7.1.dev0.tar.gz
01:08:07 Processing ./omero_dropbox-5.7.1.dev0.tar.gz
01:08:07 Installing build dependencies: started
01:08:10 Installing build dependencies: finished with status 'done'
01:08:10 Getting requirements to build wheel: started
01:08:10 Getting requirements to build wheel: finished with status 'done'
01:08:10 Preparing metadata (pyproject.toml): started
01:08:11 Preparing metadata (pyproject.toml): finished with status 'done'
01:08:11 Requirement already satisfied: omero-py in ./.venv3/lib/python3.9/site-packages (from omero-dropbox==5.7.1.dev0) (5.19.5)
01:08:11 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.26.20)
01:08:11 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.4.4)
01:08:11 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.0.0)
01:08:11 Requirement already satisfied: numpy<2 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.26.4)
01:08:11 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (11.0.0)
01:08:11 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (6.0.2)
01:08:11 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5)
01:08:11 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.32.3)
01:08:11 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.10.1)
01:08:11 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.4.0)
01:08:11 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.10)
01:08:11 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2024.8.30)
01:08:11 Building wheels for collected packages: omero-dropbox
01:08:11 Building wheel for omero-dropbox (pyproject.toml): started
01:08:11 Building wheel for omero-dropbox (pyproject.toml): finished with status 'done'
01:08:11 Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49058 sha256=148260f8f0300a940547c7faffdb934fa0db33092992cbce9bf40d285d2e896a
01:08:11 Stored in directory: /home/omero/.cache/pip/wheels/ef/93/2d/d44d5be6e4d9a58eecdbeb6e3385179e95ae7b80719377e781
01:08:11 Successfully built omero-dropbox
01:08:11 Installing collected packages: omero-dropbox
01:08:11 Successfully installed omero-dropbox-5.7.1.dev0
01:08:11 + for x in *.tar.gz
01:08:11 + pip install -U omero_marshal-0.9.1.dev0.tar.gz
01:08:12 Processing ./omero_marshal-0.9.1.dev0.tar.gz
01:08:12 Installing build dependencies: started
01:08:14 Installing build dependencies: finished with status 'done'
01:08:14 Getting requirements to build wheel: started
01:08:14 Getting requirements to build wheel: finished with status 'done'
01:08:14 Preparing metadata (pyproject.toml): started
01:08:14 Preparing metadata (pyproject.toml): finished with status 'done'
01:08:14 Building wheels for collected packages: omero_marshal
01:08:14 Building wheel for omero_marshal (pyproject.toml): started
01:08:15 Building wheel for omero_marshal (pyproject.toml): finished with status 'done'
01:08:15 Created wheel for omero_marshal: filename=omero_marshal-0.9.1.dev0-py3-none-any.whl size=88031 sha256=e449ade6bd4637219d08bc65f34d4d3fb867cb7a4a7aba7eb33a90db97ced81a
01:08:15 Stored in directory: /home/omero/.cache/pip/wheels/1a/3a/cd/b39392f5c8ba80a35bab4a0f80f93c7c4729cce6868750f4f3
01:08:15 Successfully built omero_marshal
01:08:15 Installing collected packages: omero_marshal
01:08:15 Attempting uninstall: omero_marshal
01:08:15 Found existing installation: omero-marshal 0.9.0
01:08:15 Uninstalling omero-marshal-0.9.0:
01:08:15 Successfully uninstalled omero-marshal-0.9.0
01:08:15 Successfully installed omero_marshal-0.9.1.dev0
01:08:15 + for x in *.tar.gz
01:08:15 + pip install -U omero_py-5.19.6.dev0.tar.gz
01:08:16 Processing ./omero_py-5.19.6.dev0.tar.gz
01:08:16 Installing build dependencies: started
01:08:18 Installing build dependencies: finished with status 'done'
01:08:18 Getting requirements to build wheel: started
01:08:18 Getting requirements to build wheel: finished with status 'done'
01:08:18 Preparing metadata (pyproject.toml): started
01:08:18 Preparing metadata (pyproject.toml): finished with status 'done'
01:08:18 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.6.dev0) (1.26.20)
01:08:18 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.6.dev0) (1.4.4)
01:08:18 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.6.dev0) (1.0.0)
01:08:18 Requirement already satisfied: numpy<2 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.6.dev0) (1.26.4)
01:08:18 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.6.dev0) (11.0.0)
01:08:18 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.6.dev0) (6.0.2)
01:08:18 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.6.dev0) (3.6.5)
01:08:18 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.6.dev0) (2.32.3)
01:08:18 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.6.dev0) (2.10.1)
01:08:18 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py==5.19.6.dev0) (3.4.0)
01:08:18 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py==5.19.6.dev0) (3.10)
01:08:18 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py==5.19.6.dev0) (2024.8.30)
01:08:18 Building wheels for collected packages: omero-py
01:08:18 Building wheel for omero-py (pyproject.toml): started
01:08:20 Building wheel for omero-py (pyproject.toml): finished with status 'done'
01:08:20 Created wheel for omero-py: filename=omero_py-5.19.6.dev0-py3-none-any.whl size=2783246 sha256=acf71168e3e6b4d4db1067210b5c337f4ba49116aec2469a3de23c2b3c1cbf44
01:08:20 Stored in directory: /home/omero/.cache/pip/wheels/0e/51/53/0205c66cdbe856d4da23e6b9c5d613133b733ef358e57fa643
01:08:20 Successfully built omero-py
01:08:20 Installing collected packages: omero-py
01:08:20 Attempting uninstall: omero-py
01:08:20 Found existing installation: omero-py 5.19.5
01:08:20 Uninstalling omero-py-5.19.5:
01:08:21 Successfully uninstalled omero-py-5.19.5
01:08:23 Successfully installed omero-py-5.19.6.dev0
01:08:23 + for x in *.tar.gz
01:08:23 + pip install -U omero_scripts-5.8.4.dev0.tar.gz
01:08:23 Processing ./omero_scripts-5.8.4.dev0.tar.gz
01:08:23 Installing build dependencies: started
01:08:25 Installing build dependencies: finished with status 'done'
01:08:25 Getting requirements to build wheel: started
01:08:26 Getting requirements to build wheel: finished with status 'done'
01:08:26 Preparing metadata (pyproject.toml): started
01:08:26 Preparing metadata (pyproject.toml): finished with status 'done'
01:08:26 Building wheels for collected packages: omero-scripts
01:08:26 Building wheel for omero-scripts (pyproject.toml): started
01:08:26 Building wheel for omero-scripts (pyproject.toml): finished with status 'done'
01:08:26 Created wheel for omero-scripts: filename=omero_scripts-5.8.4.dev0-py3-none-any.whl size=116645 sha256=d2ab12550dfaf2329eb3d54e990b55ef1820ab76edd594dd009c0087b9eaed60
01:08:26 Stored in directory: /home/omero/.cache/pip/wheels/28/3e/92/6522b883548147569f7375ed3132e6964d3645235d0b7e283f
01:08:26 Successfully built omero-scripts
01:08:26 Installing collected packages: omero-scripts
01:08:26 Successfully installed omero-scripts-5.8.4.dev0
01:08:27 + for x in *.tar.gz
01:08:27 + pip install -U omero_web-5.27.3.dev0.tar.gz
01:08:27 Processing ./omero_web-5.27.3.dev0.tar.gz
01:08:27 Installing build dependencies: started
01:08:30 Installing build dependencies: finished with status 'done'
01:08:30 Getting requirements to build wheel: started
01:08:30 Getting requirements to build wheel: finished with status 'done'
01:08:30 Preparing metadata (pyproject.toml): started
01:08:30 Preparing metadata (pyproject.toml): finished with status 'done'
01:08:30 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.27.3.dev0) (5.19.6.dev0)
01:08:30 Requirement already satisfied: concurrent-log-handler>=0.9.20 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.27.3.dev0) (0.9.25)
01:08:30 Requirement already satisfied: Django<4.3,>=4.2.3 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.27.3.dev0) (4.2.16)
01:08:30 Requirement already satisfied: django-pipeline==2.1.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.27.3.dev0) (2.1.0)
01:08:30 Requirement already satisfied: django-cors-headers==3.7.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.27.3.dev0) (3.7.0)
01:08:30 Collecting django-csp (from omero-web==5.27.3.dev0)
01:08:30 Using cached django_csp-3.8-py3-none-any.whl.metadata (2.7 kB)
01:08:30 Requirement already satisfied: whitenoise>=5.3.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.27.3.dev0) (6.7.0)
01:08:30 Requirement already satisfied: gunicorn>=19.3 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.27.3.dev0) (23.0.0)
01:08:30 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.27.3.dev0) (0.9.1.dev0)
01:08:30 Requirement already satisfied: Pillow in ./.venv3/lib/python3.9/site-packages (from omero-web==5.27.3.dev0) (11.0.0)
01:08:30 Requirement already satisfied: pytz in ./.venv3/lib/python3.9/site-packages (from omero-web==5.27.3.dev0) (2024.2)
01:08:30 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-web==5.27.3.dev0) (2.10.1)
01:08:30 Requirement already satisfied: packaging in ./.venv3/lib/python3.9/site-packages (from omero-web==5.27.3.dev0) (24.1)
01:08:30 Requirement already satisfied: asgiref<4,>=3.6.0 in ./.venv3/lib/python3.9/site-packages (from Django<4.3,>=4.2.3->omero-web==5.27.3.dev0) (3.8.1)
01:08:30 Requirement already satisfied: sqlparse>=0.3.1 in ./.venv3/lib/python3.9/site-packages (from Django<4.3,>=4.2.3->omero-web==5.27.3.dev0) (0.5.1)
01:08:30 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.27.3.dev0) (1.26.20)
01:08:30 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.27.3.dev0) (1.4.4)
01:08:30 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.27.3.dev0) (1.0.0)
01:08:30 Requirement already satisfied: numpy<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.27.3.dev0) (1.26.4)
01:08:30 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.27.3.dev0) (6.0.2)
01:08:30 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.27.3.dev0) (3.6.5)
01:08:30 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.27.3.dev0) (2.32.3)
01:08:30 Requirement already satisfied: typing-extensions>=4 in ./.venv3/lib/python3.9/site-packages (from asgiref<4,>=3.6.0->Django<4.3,>=4.2.3->omero-web==5.27.3.dev0) (4.12.2)
01:08:30 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.19.0->omero-web==5.27.3.dev0) (3.4.0)
01:08:30 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.19.0->omero-web==5.27.3.dev0) (3.10)
01:08:30 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.19.0->omero-web==5.27.3.dev0) (2024.8.30)
01:08:30 Using cached django_csp-3.8-py3-none-any.whl (17 kB)
01:08:30 Building wheels for collected packages: omero-web
01:08:30 Building wheel for omero-web (pyproject.toml): started
01:08:32 Building wheel for omero-web (pyproject.toml): finished with status 'done'
01:08:32 Created wheel for omero-web: filename=omero_web-5.27.3.dev0-py3-none-any.whl size=2766670 sha256=f7dfc94788b1e571a7e04e5b3b1f2fcdcfcff68ca63347a7a776047d3d016f44
01:08:32 Stored in directory: /home/omero/.cache/pip/wheels/f0/b3/64/dc77f8e1a2385b2f8ef248e63a59b8ba8d51c2c928e147e9d6
01:08:32 Successfully built omero-web
01:08:32 Installing collected packages: django-csp, omero-web
01:08:32 Attempting uninstall: omero-web
01:08:32 Found existing installation: omero-web 5.27.2
01:08:32 Uninstalling omero-web-5.27.2:
01:08:32 Successfully uninstalled omero-web-5.27.2
01:08:33 Successfully installed django-csp-3.8 omero-web-5.27.3.dev0
01:08:33 + pip install omero-certificates
01:08:34 Collecting omero-certificates
01:08:34 Using cached omero_certificates-0.3.2-py3-none-any.whl.metadata (3.7 kB)
01:08:34 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib/python3.9/site-packages (from omero-certificates) (5.19.6.dev0)
01:08:34 Collecting distro==1.8.0 (from omero-certificates)
01:08:34 Using cached distro-1.8.0-py3-none-any.whl.metadata (6.9 kB)
01:08:34 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.26.20)
01:08:34 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.4.4)
01:08:34 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.0.0)
01:08:34 Requirement already satisfied: numpy<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.26.4)
01:08:34 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (11.0.0)
01:08:34 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (6.0.2)
01:08:34 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (3.6.5)
01:08:34 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (2.32.3)
01:08:34 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (2.10.1)
01:08:34 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.4.0)
01:08:34 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.10)
01:08:34 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2024.8.30)
01:08:34 Using cached omero_certificates-0.3.2-py3-none-any.whl (13 kB)
01:08:34 Using cached distro-1.8.0-py3-none-any.whl (20 kB)
01:08:34 Installing collected packages: distro, omero-certificates
01:08:34 Successfully installed distro-1.8.0 omero-certificates-0.3.2
01:08:34 + for x in omero-cli-duplicate
01:08:34 + pip install git+https://github.com/snoopycrimecop/omero-cli-duplicate.git@merge_ci#egg=omero-cli-duplicate
01:08:35 Collecting omero-cli-duplicate
01:08:35 Cloning https://github.com/snoopycrimecop/omero-cli-duplicate.git (to revision merge_ci) to /tmp/pip-install-2c6rx367/omero-cli-duplicate_29532b6e247c44108e5622daa6ee9e97
01:08:35 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-duplicate.git /tmp/pip-install-2c6rx367/omero-cli-duplicate_29532b6e247c44108e5622daa6ee9e97
01:08:36 Running command git checkout -b merge_ci --track origin/merge_ci
01:08:37 Switched to a new branch 'merge_ci'
01:08:37 branch 'merge_ci' set up to track 'origin/merge_ci'.
01:08:37 Resolved https://github.com/snoopycrimecop/omero-cli-duplicate.git to commit 8438822c5351725fa14d38a532064785928011b0
01:08:37 Installing build dependencies: started
01:08:39 Installing build dependencies: finished with status 'done'
01:08:39 Getting requirements to build wheel: started
01:08:39 Getting requirements to build wheel: finished with status 'done'
01:08:39 Preparing metadata (pyproject.toml): started
01:08:39 Preparing metadata (pyproject.toml): finished with status 'done'
01:08:39 Requirement already satisfied: omero-py>=5.8 in ./.venv3/lib/python3.9/site-packages (from omero-cli-duplicate) (5.19.6.dev0)
01:08:39 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.26.20)
01:08:39 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.4.4)
01:08:39 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.0.0)
01:08:39 Requirement already satisfied: numpy<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.26.4)
01:08:39 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (11.0.0)
01:08:39 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (6.0.2)
01:08:39 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.6.5)
01:08:39 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.32.3)
01:08:39 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.10.1)
01:08:39 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.4.0)
01:08:39 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.10)
01:08:39 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2024.8.30)
01:08:39 Building wheels for collected packages: omero-cli-duplicate
01:08:39 Building wheel for omero-cli-duplicate (pyproject.toml): started
01:08:40 Building wheel for omero-cli-duplicate (pyproject.toml): finished with status 'done'
01:08:40 Created wheel for omero-cli-duplicate: filename=omero_cli_duplicate-0.4.1.dev0-py3-none-any.whl size=11442 sha256=64eeb30017cced4ce27f5aac464ef1beed28bef834bb8f2832c43296e21daff4
01:08:40 Stored in directory: /tmp/pip-ephem-wheel-cache-37cx7i56/wheels/f1/55/ac/0cb8b093a4c417e5157143839711e7613efa64eaa21c29ef84
01:08:40 Successfully built omero-cli-duplicate
01:08:40 Installing collected packages: omero-cli-duplicate
01:08:40 Successfully installed omero-cli-duplicate-0.4.1.dev0
01:08:40 + source /home/omero/workspace/OMERO-test-integration/src/docs/hudson/functions.sh
01:08:40 + /home/omero/workspace/OMERO-test-integration/src/build.py build-default test-compile
01:08:40 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
01:08:40 Buildfile: /home/omero/workspace/OMERO-test-integration/src/build.xml
01:08:40
01:08:40 check-ivy:
01:08:40 Creating /home/omero/workspace/OMERO-test-integration/src/etc/local.properties
01:08:40 Created dir: /home/omero/workspace/OMERO-test-integration/src/target
01:08:41 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:08:41 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
01:08:41
01:08:41 build-scons:
01:08:41 Expanding: /home/omero/workspace/OMERO-test-integration/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-test-integration/src/target/scons
01:08:41
01:08:41 build:
01:08:41 No sub-builds to iterate on
01:08:41 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb...
01:08:41 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb...
01:08:41 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroFS...
01:08:41 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava...
01:08:41
01:08:41 tools-init:
01:08:41 no-op
01:08:42
01:08:42 retrieve:
01:08:42 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:08:42 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
01:08:42 WARNING: An illegal reflective access operation has occurred
01:08:42 WARNING: Illegal reflective access by org.apache.ivy.util.url.IvyAuthenticator (file:/home/omero/workspace/OMERO-test-integration/src/lib/repository/ivy-2.4.0.jar) to field java.net.Authenticator.theAuthenticator
01:08:42 WARNING: Please consider reporting this to the maintainers of org.apache.ivy.util.url.IvyAuthenticator
01:08:42 WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
01:08:42 WARNING: All illegal access operations will be denied in a future release
01:08:53
01:08:53 prepare:
01:08:53 Preparing: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs
01:08:53 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/.done
01:08:53 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/src
01:08:53 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources
01:08:53 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes
01:08:53 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/test-classes
01:08:53 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/reports
01:08:53 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources
01:08:53 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes
01:08:53 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources
01:08:53 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes
01:08:53 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources
01:08:53 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes
01:08:53 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources
01:08:53 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes
01:08:53
01:08:53 pre-compile:
01:08:53 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes
01:08:53 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes
01:08:54 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes
01:08:54 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes
01:08:54 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes
01:08:54
01:08:54 compile:
01:08:54 no-op
01:08:54
01:08:54 package:
01:08:54 Building jar: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/omero_client.jar
01:08:55
01:08:55 install:
01:08:55 :: delivering :: omero#omero_client;working@bdaf9f08f5d1 :: 5.6.3-513-85571adcc5-ice36-ice36 :: integration :: Sun Oct 27 01:08:41 UTC 2024
01:08:55 delivering ivy file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/ivy.xml
01:08:55 :: publishing :: omero#omero_client
01:08:55 published omero_client to /home/omero/workspace/OMERO-test-integration/src/target/repository/omero/omero_client/5.6.3-513-85571adcc5-ice36-ice36/omero_client-5.6.3-513-85571adcc5-ice36-ice36.jar
01:08:55 published ivy to /home/omero/workspace/OMERO-test-integration/src/target/repository/omero/omero_client/5.6.3-513-85571adcc5-ice36-ice36/omero_client-5.6.3-513-85571adcc5-ice36-ice36.xml
01:08:55 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy...
01:08:55 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy...
01:08:55
01:08:55 retrieve:
01:08:55 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:08:55 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
01:08:55 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools...
01:08:55
01:08:55 dist:
01:08:55 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/target/service-classes/META-INF
01:08:55 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/target/lib/server
01:08:55 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/target/downloads/scripts
01:08:55 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/target/downloads/scripts/omero_scripts-5.8.4.dev0.tar.gz into /home/omero/workspace/OMERO-test-integration/src/components/tools/target/downloads/scripts
01:08:55 Copying 28 files to /home/omero/workspace/OMERO-test-integration/src/components/tools/target/lib/scripts
01:08:55 Copying 28 files to /home/omero/workspace/OMERO-test-integration/src/dist
01:08:55 Copied 9 empty directories to 1 empty directory under /home/omero/workspace/OMERO-test-integration/src/dist
01:08:56 Entering /home/omero/workspace/OMERO-test-integration/src/components/tests...
01:08:56 Entering /home/omero/workspace/OMERO-test-integration/src/components/tests/ui...
01:08:56
01:08:56 copy-licenses:
01:08:56 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/dist
01:08:56 Created dir: /home/omero/workspace/OMERO-test-integration/src/dist/share
01:08:56 Copying 44 files to /home/omero/workspace/OMERO-test-integration/src/dist/share
01:08:56
01:08:56 copy-history:
01:08:56 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/dist
01:08:56
01:08:56 copy-etc:
01:08:56 Copying 28 files to /home/omero/workspace/OMERO-test-integration/src/dist/etc
01:08:56 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/dist/etc/templates
01:08:56
01:08:56 copy-sql:
01:08:56 Copying 60 files to /home/omero/workspace/OMERO-test-integration/src/dist
01:08:59
01:08:59 copy-server:
01:08:59 conflict on /home/omero/workspace/OMERO-test-integration/src/dist/lib/server/janino.jar in [server]: 3.0.11 won
01:08:59
01:08:59 copy-client:
01:08:59 Created dir: /home/omero/workspace/OMERO-test-integration/src/dist/lib/client
01:09:00 conflict on /home/omero/workspace/OMERO-test-integration/src/dist/lib/client/janino.jar in [client]: 3.0.11 won
01:09:00
01:09:00 update-version:
01:09:00 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/dist/etc
01:09:00
01:09:00 create-workdirs:
01:09:00 Created dir: /home/omero/workspace/OMERO-test-integration/src/dist/etc/grid
01:09:00 Created dir: /home/omero/workspace/OMERO-test-integration/src/dist/var
01:09:00
01:09:00 copy-luts:
01:09:00 Created dir: /home/omero/workspace/OMERO-test-integration/src/dist/lib/scripts/luts
01:09:00 Copying 39 files to /home/omero/workspace/OMERO-test-integration/src/dist/lib/scripts/luts
01:09:00
01:09:00 test-compile:
01:09:00 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
01:09:00 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroFS...
01:09:01 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy...
01:09:01 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy...
01:09:01 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb...
01:09:01 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb...
01:09:01 Entering /home/omero/workspace/OMERO-test-integration/src/components/tests/ui...
01:09:01 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava...
01:09:01
01:09:01 testng-init:
01:09:01 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:09:01 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
01:09:04 01:09:04,154 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
01:09:04 01:09:04,158 |-INFO in ch.qos.logback.classic.util.ContextInitializer@196ca821 - No custom configurators were discovered as a service.
01:09:04 01:09:04,158 |-INFO in ch.qos.logback.classic.util.ContextInitializer@196ca821 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
01:09:04 01:09:04,162 |-INFO in ch.qos.logback.classic.util.ContextInitializer@196ca821 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
01:09:04 01:09:04,162 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
01:09:04 01:09:04,163 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
01:09:04 01:09:04,164 |-INFO in ch.qos.logback.classic.util.ContextInitializer@196ca821 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
01:09:04 01:09:04,164 |-INFO in ch.qos.logback.classic.util.ContextInitializer@196ca821 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
01:09:04 01:09:04,166 |-INFO in ch.qos.logback.classic.util.ContextInitializer@196ca821 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
01:09:04 01:09:04,167 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
01:09:04 01:09:04,167 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml]
01:09:04 01:09:04,168 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@373636f3 - Resource [logback.xml] occurs multiple times on the classpath.
01:09:04 01:09:04,168 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@373636f3 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml]
01:09:04 01:09:04,168 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@373636f3 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
01:09:04 01:09:04,485 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
01:09:04 01:09:04,485 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
01:09:04 01:09:04,504 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
01:09:04 01:09:04,506 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@2ca413f6 - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
01:09:04 01:09:04,506 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@2ca413f6 - Please move "immediateFlush" property into the enclosing appender.
01:09:04 01:09:04,569 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@2ca413f6 - Setting the "immediateFlush" property of the enclosing appender to true
01:09:04 01:09:04,570 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
01:09:04 01:09:04,570 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
01:09:04 01:09:04,570 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
01:09:04 01:09:04,570 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
01:09:04 01:09:04,570 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
01:09:04 01:09:04,570 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
01:09:04 01:09:04,571 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@66e478c7 - End of configuration.
01:09:04 01:09:04,573 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@1a35f99a - Registering current configuration as safe fallback point
01:09:04 01:09:04,573 |-INFO in ch.qos.logback.classic.util.ContextInitializer@196ca821 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 407 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
01:09:04
01:09:04 lifecycle.test-compile:
01:09:04 Copying 3 files to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/test-classes
01:09:04 Compiling 85 source files to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/test-classes
01:09:05 warning: [options] bootstrap class path not set in conjunction with -source 8
01:09:06 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/AbstractServerTest.java:61: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:09:06 import omero.grid.RawAccessRequest;
01:09:06 ^
01:09:06 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:32: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:09:06 import omero.grid.RawAccessRequest;
01:09:06 ^
01:09:06 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:53: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:09:06 import omero.grid.RawAccessRequest;
01:09:06 ^
01:09:06 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:31: warning: [deprecation] ImportJob in omero.model has been deprecated
01:09:06 import omero.model.ImportJob;
01:09:06 ^
01:09:06 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:32: warning: [deprecation] ImportJobI in omero.model has been deprecated
01:09:06 import omero.model.ImportJobI;
01:09:06 ^
01:09:07 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ModelMockFactory.java:1206: warning: [deprecation] newInstance() in Class has been deprecated
01:09:07 IObject link = (IObject) linkClass.newInstance();
01:09:07 ^
01:09:07 where T is a type-variable:
01:09:07 T extends Object declared in class Class
01:09:07 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/CreatePojosFixture2.java:269: warning: [deprecation] newInstance() in Class has been deprecated
01:09:07 T copy = (T) obj.getClass().newInstance();
01:09:07 ^
01:09:07 where T is a type-variable:
01:09:07 T extends Object declared in class Class
01:09:08 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:09:08 RawAccessRequest raw = new RawAccessRequest();
01:09:08 ^
01:09:08 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:09:08 RawAccessRequest raw = new RawAccessRequest();
01:09:08 ^
01:09:08 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:419: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
01:09:08 raw.repoUuid = legacy.root().getHash().getValue();
01:09:08 ^
01:09:08 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:420: warning: [deprecation] command in RawAccessRequest has been deprecated
01:09:08 raw.command = "rm";
01:09:08 ^
01:09:08 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:421: warning: [deprecation] args in RawAccessRequest has been deprecated
01:09:08 raw.args = Arrays.asList(path);
01:09:08 ^
01:09:08 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DiskUsageTest.java:156: warning: [deprecation] newInstance() in Class has been deprecated
01:09:08 final IObject link = linkClass.newInstance();
01:09:08 ^
01:09:08 where T is a type-variable:
01:09:08 T extends Object declared in class Class
01:09:08 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DuplicationTest.java:1332: warning: [deprecation] newInstance() in Class has been deprecated
01:09:08 originalLink.setChild(annotationClass.newInstance());
01:09:08 ^
01:09:08 where T is a type-variable:
01:09:08 T extends Object declared in class Class
01:09:08 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ImporterTest.java:1088: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
01:09:08 RoiResult r = svc.findByImage(id, new RoiOptions());
01:09:08 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:09:09 final RawAccessRequest request = new RawAccessRequest();
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:09:09 final RawAccessRequest request = new RawAccessRequest();
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:901: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
01:09:09 request.repoUuid = repo.root().getHash().getValue();
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:902: warning: [deprecation] command in RawAccessRequest has been deprecated
01:09:09 request.command = "exists";
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:903: warning: [deprecation] args in RawAccessRequest has been deprecated
01:09:09 request.args = Collections.singletonList(dirPath);
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:09:09 final RawAccessRequest request = new RawAccessRequest();
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:09:09 final RawAccessRequest request = new RawAccessRequest();
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:940: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
01:09:09 request.repoUuid = repo.root().getHash().getValue();
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:941: warning: [deprecation] command in RawAccessRequest has been deprecated
01:09:09 request.command = "exists";
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:942: warning: [deprecation] args in RawAccessRequest has been deprecated
01:09:09 request.args = Collections.singletonList(dirName);
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJob in omero.model has been deprecated
01:09:09 final ImportJob importJob = new ImportJobI();
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJobI in omero.model has been deprecated
01:09:09 final ImportJob importJob = new ImportJobI();
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:266: warning: [deprecation] setImageName(RString) in ImportJob has been deprecated
01:09:09 importJob.setImageName(omero.rtypes.rstring(name));
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:268: warning: [deprecation] setImageDescription(RString) in ImportJob has been deprecated
01:09:09 importJob.setImageDescription(omero.rtypes.rstring(desc));
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
01:09:09 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
01:09:09 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:274: warning: [deprecation] getImageName() in ImportJob has been deprecated
01:09:09 final String savedName = sent.getImageName().getValue().toString();
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:275: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
01:09:09 final String savedDesc = sent.getImageDescription().getValue().toString();
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
01:09:09 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
01:09:09 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:278: warning: [deprecation] getImageName() in ImportJob has been deprecated
01:09:09 final String retrievedName = retrievedImportJob.getImageName().getValue().toString();
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:279: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
01:09:09 final String retrievedDesc = retrievedImportJob.getImageDescription().getValue().toString();
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:141: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
01:09:09 RoiResult r = svc.findByImage(image.getId().getValue(),
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:190: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:09:09 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:220: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:09:09 l = svc.getRoiMeasurements(image.getId().getValue(), options);
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:241: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:09:09 l = svc.getRoiMeasurements(image.getId().getValue(), options);
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:313: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:09:09 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:320: warning: [deprecation] getMeasuredRoisMap(long,List<Long>,RoiOptions) in IRoiPrx has been deprecated
01:09:09 Map<Long, RoiResult> values = svc.getMeasuredRoisMap(image.getId()
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:386: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:09:09 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:390: warning: [deprecation] getTable(long) in IRoiPrx has been deprecated
01:09:09 table = svc.getTable(f.getId().getValue());
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:412: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
01:09:09 RoiResult r = svc.findByImage(image.getId().getValue(),
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:426: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
01:09:09 r = svc.findByRoi(r1.getId().getValue(), new RoiOptions());
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:437: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
01:09:09 r = svc.findByRoi(r2.getId().getValue(), new RoiOptions());
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:448: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
01:09:09 r = svc.findByPlane(image.getId().getValue(), 1, 0, new RoiOptions());
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:459: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
01:09:09 r = svc.findByPlane(image.getId().getValue(), 1, 1, new RoiOptions());
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [deprecation] Integer(int) in Integer has been deprecated
01:09:09 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [deprecation] Integer(int) in Integer has been deprecated
01:09:09 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [deprecation] Integer(int) in Integer has been deprecated
01:09:09 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [deprecation] Integer(int) in Integer has been deprecated
01:09:09 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Long(long) in Long has been deprecated
01:09:09 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Integer(int) in Integer has been deprecated
01:09:09 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Integer(int) in Integer has been deprecated
01:09:09 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [deprecation] Integer(int) in Integer has been deprecated
01:09:09 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [deprecation] Integer(int) in Integer has been deprecated
01:09:09 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [deprecation] Integer(int) in Integer has been deprecated
01:09:09 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [deprecation] Integer(int) in Integer has been deprecated
01:09:09 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [deprecation] Integer(int) in Integer has been deprecated
01:09:09 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [deprecation] Integer(int) in Integer has been deprecated
01:09:09 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [deprecation] Integer(int) in Integer has been deprecated
01:09:09 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [deprecation] Integer(int) in Integer has been deprecated
01:09:09 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [deprecation] Integer(int) in Integer has been deprecated
01:09:09 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [deprecation] Integer(int) in Integer has been deprecated
01:09:09 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:755: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
01:09:09 svc.getShapeStatsRestricted(
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:764: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
01:09:09 final ShapeStats [] stats = svc.getShapeStatsRestricted(ids, 0, 0, new int[] {0});
01:09:09 ^
01:09:09 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java:1030: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:09:09 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
01:09:09 ^
01:09:10 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:478: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
01:09:10 request.typesToIgnore = Collections.singletonList("TagAnnotation");
01:09:10 ^
01:09:10 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:495: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
01:09:10 request.typesToIgnore = Collections.singletonList("IAnnotationLink");
01:09:10 ^
01:09:10 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:501: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
01:09:10 request.typesToIgnore = Collections.singletonList("Annotation");
01:09:10 ^
01:09:10 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:547: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
01:09:10 request.typesToIgnore = Collections.singletonList("Annotation");
01:09:10 ^
01:09:10 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/HierarchyDeleteTest.java:537: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:09:10 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
01:09:10 ^
01:09:10 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:37: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:09:10 p2.setRelatedTo(p1);
01:09:10 ^
01:09:10 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:39: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:09:10 Assert.assertEquals(p1.getId(), p2.getRelatedTo().getId());
01:09:10 ^
01:09:10 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:66: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:09:10 pixels1.setRelatedTo(pixels2);
01:09:10 ^
01:09:10 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:68: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:09:10 Pixels pixels = pixels1.getRelatedTo();
01:09:10 ^
01:09:10 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:88: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:09:10 Assert.assertNull(pixels1.getRelatedTo());
01:09:10 ^
01:09:10 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:106: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:09:10 pixels1.setRelatedTo(pixels2);
01:09:10 ^
01:09:10 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:108: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:09:10 Pixels pixels = pixels1.getRelatedTo();
01:09:10 ^
01:09:10 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:128: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:09:10 Assert.assertNull(pixels1.getRelatedTo());
01:09:10 ^
01:09:10 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:113: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:09:10 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:09:10 ^
01:09:10 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:147: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:09:10 l = svc.getRoiMeasurements(image.getId().getValue(), options);
01:09:10 ^
01:09:10 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:186: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:09:10 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:09:10 ^
01:09:10 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:221: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:09:10 l = svc.getRoiMeasurements(image.getId().getValue(), options);
01:09:10 ^
01:09:10 Note: Some input files use unchecked or unsafe operations.
01:09:10 Note: Recompile with -Xlint:unchecked for details.
01:09:10 88 warnings
01:09:10 Deleting: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/_omero_build_1065250055.tmp
01:09:10 Building jar: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/OmeroJava-test.jar
01:09:10 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
01:09:10 :: delivering :: omero#OmeroJava-test;working@bdaf9f08f5d1 :: 5.6.3-513-85571adcc5-ice36-ice36 :: integration :: Sun Oct 27 01:09:01 UTC 2024
01:09:10 delivering ivy file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/OmeroJava-test.xml
01:09:10 :: publishing :: omero#OmeroJava-test
01:09:10 published OmeroJava-test to /home/omero/workspace/OMERO-test-integration/src/target/test-repository/OmeroJava-test-5.6.3-513-85571adcc5-ice36-ice36.jar
01:09:10 published ivy to /home/omero/workspace/OMERO-test-integration/src/target/test-repository/OmeroJava-test-5.6.3-513-85571adcc5-ice36-ice36.xml
01:09:10
01:09:10 BUILD SUCCESSFUL
01:09:10 Total time: 30 seconds
01:09:10 + OMERO_DIST=/home/omero/workspace/OMERO-test-integration/src/dist
01:09:10 + export OMERODIR=/home/omero/workspace/OMERO-test-integration/src/dist
01:09:10 + OMERODIR=/home/omero/workspace/OMERO-test-integration/src/dist
01:09:10 + omero config set omero.db.name OMERO-test-integration
01:09:11 + omero config set omero.db.host pg
01:09:12 + omero config set omero.db.user postgres
01:09:13 + omero config set omero.db.poolsize 50
01:09:15 + omero config set omero.jvmcfg.max_system_memory.blitz 64000
01:09:16 + omero config set omero.data.dir /home/omero/workspace/OMERO-test-integration/data
01:09:17 + omero config set omero.ports.prefix 1
01:09:18 + omero config set omero.web.server_list '[["testintegration",14064,"testintegration"]]'
01:09:19 + omero certificates
01:09:21 OpenSSL 3.0.7 1 Nov 2022 (Library: OpenSSL 3.0.7 1 Nov 2022)
01:09:21 certificates created: /home/omero/workspace/OMERO-test-integration/data/certs/server.key /home/omero/workspace/OMERO-test-integration/data/certs/server.pem /home/omero/workspace/OMERO-test-integration/data/certs/server.p12
01:09:21 + createdb -h pg -U postgres OMERO-test-integration
01:09:22 + omero db script -f dbsetup.sql '' '' omero
01:09:23 WARNING: Positional arguments are deprecated
01:09:23 Using OMERO5.4 for version
01:09:23 Using 0 for patch
01:09:23 Using password from commandline
01:09:24 + psql -h pg -U postgres -d OMERO-test-integration -f dbsetup.sql
01:09:25 BEGIN
01:09:25 CREATE FUNCTION
01:09:25 CREATE FUNCTION
01:09:25 assert_db_server_prerequisites
01:09:25 --------------------------------
01:09:25
01:09:25 (1 row)
01:09:25
01:09:25 DROP FUNCTION
01:09:25 DROP FUNCTION
01:09:25 CREATE DOMAIN
01:09:25 CREATE DOMAIN
01:09:25 CREATE DOMAIN
01:09:25 CREATE DOMAIN
01:09:25 CREATE DOMAIN
01:09:25 CREATE TYPE
01:09:25 CREATE TYPE
01:09:25 CREATE TYPE
01:09:25 CREATE TYPE
01:09:25 CREATE TYPE
01:09:25 CREATE TYPE
01:09:25 CREATE TYPE
01:09:25 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:26 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 CREATE TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 psql:dbsetup.sql:2842: NOTICE: identifier "fkcontraststretchingcontext_codomainmapcontext_id_codomainmapcontext" will be truncated to "fkcontraststretchingcontext_codomainmapcontext_id_codomainmapco"
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 psql:dbsetup.sql:4712: NOTICE: identifier "fklogicalchannel_photometricinterpretation_photometricinterpretation" will be truncated to "fklogicalchannel_photometricinterpretation_photometricinterpret"
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 psql:dbsetup.sql:5697: NOTICE: identifier "fkreverseintensitycontext_codomainmapcontext_id_codomainmapcontext" will be truncated to "fkreverseintensitycontext_codomainmapcontext_id_codomainmapcont"
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 ALTER TABLE
01:09:27 CREATE TABLE
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 DROP TABLE
01:09:27 CREATE VIEW
01:09:27 CREATE FUNCTION
01:09:27 CREATE TRIGGER
01:09:27 CREATE FUNCTION
01:09:27 CREATE TRIGGER
01:09:27 CREATE FUNCTION
01:09:27 CREATE TRIGGER
01:09:27 CREATE FUNCTION
01:09:27 CREATE TRIGGER
01:09:27 CREATE FUNCTION
01:09:27 CREATE TRIGGER
01:09:27 CREATE FUNCTION
01:09:27 CREATE TRIGGER
01:09:27 CREATE FUNCTION
01:09:27 CREATE TRIGGER
01:09:27 CREATE FUNCTION
01:09:27 CREATE TRIGGER
01:09:27 CREATE FUNCTION
01:09:27 CREATE TRIGGER
01:09:27 CREATE FUNCTION
01:09:27 CREATE TRIGGER
01:09:27 CREATE FUNCTION
01:09:27 CREATE TRIGGER
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:27 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE FUNCTION
01:09:28 SET CONSTRAINTS
01:09:28 CREATE FUNCTION
01:09:28 CREATE SEQUENCE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 CREATE INDEX
01:09:28 CREATE FUNCTION
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE SEQUENCE
01:09:28 INSERT 0 1
01:09:28 CREATE FUNCTION
01:09:28 CREATE FUNCTION
01:09:28 CREATE FUNCTION
01:09:28 CREATE TABLE
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 CREATE FUNCTION
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE FUNCTION
01:09:28 CREATE FUNCTION
01:09:28 CREATE FUNCTION
01:09:28 CREATE FUNCTION
01:09:28 CREATE FUNCTION
01:09:28 CREATE FUNCTION
01:09:28 CREATE FUNCTION
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 INSERT 0 1
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 UPDATE 1
01:09:28 UPDATE 1
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 UPDATE 1
01:09:28 UPDATE 1
01:09:28 UPDATE 1
01:09:28 UPDATE 1
01:09:28 UPDATE 1
01:09:28 UPDATE 1
01:09:28 UPDATE 1
01:09:28 UPDATE 1
01:09:28 UPDATE 1
01:09:28 UPDATE 1
01:09:28 UPDATE 1
01:09:28 ALTER TABLE
01:09:28 CREATE FUNCTION
01:09:28 CREATE TABLE
01:09:28 INSERT 0 1
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 CREATE INDEX
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 ALTER TABLE
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE TABLE
01:09:28 INSERT 0 1
01:09:28 INSERT 0 1
01:09:28 CREATE TABLE
01:09:28 INSERT 0 1
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 CREATE TABLE
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE INDEX
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 CREATE FUNCTION
01:09:28 CREATE FUNCTION
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 DROP TABLE
01:09:28 DROP TABLE
01:09:28 DROP TABLE
01:09:28 DROP TABLE
01:09:28 DROP TABLE
01:09:28 CREATE VIEW
01:09:28 CREATE VIEW
01:09:28 CREATE VIEW
01:09:28 CREATE VIEW
01:09:28 CREATE VIEW
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 ALTER TABLE
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 CREATE TABLE
01:09:28 CREATE INDEX
01:09:28 CREATE FUNCTION
01:09:28 CREATE FUNCTION
01:09:28 CREATE FUNCTION
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE FUNCTION
01:09:28 CREATE FUNCTION
01:09:28 CREATE TRIGGER
01:09:28 CREATE TRIGGER
01:09:28 CREATE INDEX
01:09:28 UPDATE 1
01:09:28 COMMIT
01:09:28 + rm dbsetup.sql
01:09:28 + export OMERO_PROFILE=/home/omero/workspace/OMERO-test-integration/config
01:09:28 + OMERO_PROFILE=/home/omero/workspace/OMERO-test-integration/config
01:09:28 + mkdir -p /home/omero/workspace/OMERO-test-integration/config/blitz
01:09:28 + cp /home/omero/workspace/OMERO-test-integration/src/dist/etc/blitz/mail-senders.example /home/omero/workspace/OMERO-test-integration/src/dist/etc/blitz/mail-server.example /home/omero/workspace/OMERO-test-integration/config/blitz
01:09:28 + for f in $OMERO_PROFILE/blitz/*
01:09:28 ++ basename /home/omero/workspace/OMERO-test-integration/config/blitz/mail-senders.example .example
01:09:28 + mv /home/omero/workspace/OMERO-test-integration/config/blitz/mail-senders.example /home/omero/workspace/OMERO-test-integration/config/blitz/mail-senders.xml
01:09:28 + for f in $OMERO_PROFILE/blitz/*
01:09:28 ++ basename /home/omero/workspace/OMERO-test-integration/config/blitz/mail-server.example .example
01:09:28 + mv /home/omero/workspace/OMERO-test-integration/config/blitz/mail-server.example /home/omero/workspace/OMERO-test-integration/config/blitz/mail-server.xml
01:09:28 + omero config set omero.mail.config true
01:09:30 + omero config set omero.mail.fake true
01:09:31 + omero config set omero.mail.port 2525
01:09:32 + BUILD_ID=DONT_KILL_ME
01:09:32 + omero admin start
01:09:42 No descriptor given. Using etc/grid/default.xml
01:10:03 Creating /home/omero/workspace/OMERO-test-integration/src/dist/var/master
01:10:03 Initializing /home/omero/workspace/OMERO-test-integration/src/dist/var/log
01:10:03 Creating /home/omero/workspace/OMERO-test-integration/src/dist/var/registry
01:10:03 Waiting on startup. Use CTRL-C to exit
01:10:03 + omero admin waitup
01:10:04 Waiting on startup. Use CTRL-C to exit
01:10:04 + omero admin diagnostics
01:10:11 ERROR:omero.util.UpgradeCheck:HTTPConnectionPool(host='upgrade.openmicroscopy.org.uk', port=80): Max retries exceeded with url: /?version=5.19.6.dev0&os.name=Linux&os.arch=x86_64&os.version=Linux-5.14.0-427.40.1.el9_4.x86_64-x86_64-with-glibc2.34&python.version=3.9.18&python.compiler=GCC+11.4.1+20231218+%28Red+Hat+11.4.1-3%29&python.build=main&python.build=Aug+23+2024+00%3A00%3A00 (Caused by ConnectTimeoutError(<urllib3.connection.HTTPConnection object at 0x7f7cdf1dc550>, 'Connection to upgrade.openmicroscopy.org.uk timed out. (connect timeout=6.0)'))
01:10:11
01:10:11 ================================================================================
01:10:11 OMERO Diagnostics (admin)
01:10:11 ================================================================================
01:10:11
01:10:11 Commands: java -version 11.0.24 (/usr/bin/java)
01:10:11 Commands: python -V 3.9.18 (/home/omero/workspace/OMERO-test-integration/.venv3/bin/python)
01:10:11 Commands: icegridnode --version 3.6.5 (/opt/ice-3.6.5/bin/icegridnode)
01:10:11 Commands: icegridadmin --version 3.6.5 (/opt/ice-3.6.5/bin/icegridadmin)
01:10:11 Commands: psql --version 16.4 (/usr/bin/psql)
01:10:11 Commands: openssl version 3.0.71 (/usr/bin/openssl)
01:10:11
01:10:11 Component: OMERO.py 5.19.6.dev0
01:10:11 Component: OMERO.server 5.6.3-513-85571adcc5-ice36-ice36
01:10:11
01:10:11 Server: icegridnode running
01:10:11 Server: Blitz-0 active (pid = 1350621, enabled)
01:10:11 Server: DropBox active (pid = 1350643, enabled)
01:10:11 Server: FileServer active (pid = 1350654, enabled)
01:10:11 Server: Indexer-0 active (pid = 1350657, enabled)
01:10:11 Server: MonitorServer active (pid = 1350658, enabled)
01:10:11 Server: OMERO.Glacier2 active (pid = 1350668, enabled)
01:10:11 Server: OMERO.IceStorm active (pid = 1350677, enabled)
01:10:11 Server: PixelData-0 active (pid = 1350692, enabled)
01:10:11 Server: Processor-0 activating (enabled)
01:10:11 Server: Tables-0 activating (enabled)
01:10:11 Server: TestDropBox inactive (enabled)
01:10:11
01:10:11 Log dir: /home/omero/workspace/OMERO-test-integration/src/dist/var/log exists
01:10:11 Log files: Blitz-0.log 133.7 KB errors=1 warnings=2
01:10:11 Log files: DropBox.log 1.4 KB
01:10:11 Log files: FileServer.log 114 B
01:10:11 Log files: Indexer-0.log 2.9 KB errors=0 warnings=2
01:10:11 Log files: MonitorServer.log 1.2 KB
01:10:11 Log files: PixelData-0.log 3.7 KB errors=0 warnings=2
01:10:11 Log files: Processor-0.log 592 B
01:10:11 Log files: Tables-0.log 841 B
01:10:11 Log files: TestDropBox.log n/a
01:10:11 Log files: master.err 2.1 KB
01:10:11 Log files: master.out 41.5 KB
01:10:11 Log files: Total size 0.19 MB
01:10:11
01:10:11
01:10:11 Environment:OMERO_HOME=(unset)
01:10:11 Environment:OMERODIR=/home/omero/workspace/OMERO-test-integration/src/dist
01:10:11 Environment:OMERO_NODE=(unset)
01:10:11 Environment:OMERO_MASTER=(unset)
01:10:11 Environment:OMERO_USERDIR=(unset)
01:10:11 Environment:OMERO_TMPDIR=(unset)
01:10:11 Environment:PATH=/home/omero/workspace/OMERO-test-integration/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:10:11 Environment:PYTHONPATH=(unset)
01:10:11 Environment:ICE_HOME=/opt/ice-3.6.5
01:10:11 Environment:LD_LIBRARY_PATH=(unset)
01:10:11 Environment:DYLD_LIBRARY_PATH=(unset)
01:10:11
01:10:11 OMERO SSL port:14064
01:10:11 OMERO TCP port:14063
01:10:11 OMERO data dir:'/home/omero/workspace/OMERO-test-integration/data' Exists? True Is writable? True
01:10:11 OMERO temp dir:'/home/omero/omero/tmp' Exists? True Is writable? True (Size: 485861)
01:10:11
01:10:11 JVM settings: Blitz-${index} -Xmx9600m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions
01:10:11 JVM settings: Indexer-${index} -Xmx4800m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions
01:10:11 JVM settings: PixelData-${index} -Xmx7200m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions
01:10:11 JVM settings: Repository-${index} -Xmx4800m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions
01:10:11
01:10:11 Jar: lib/server/formats-api.jar Bio-Formats API 8.1.0-SNAPSHOT 27 October 2024 583016a8fb5118d0c2defeb87b80b78575f72f4f
01:10:11 Jar: lib/server/formats-bsd.jar BSD Bio-Formats readers and writers 8.1.0-SNAPSHOT 27 October 2024 583016a8fb5118d0c2defeb87b80b78575f72f4f
01:10:11 Jar: lib/server/formats-gpl.jar Bio-Formats library 8.1.0-SNAPSHOT 27 October 2024 583016a8fb5118d0c2defeb87b80b78575f72f4f
01:10:11 Jar: lib/server/ome-codecs.jar OME Codecs 1.0.4-SNAPSHOT 27 October 2024 857a3276c5e3744c713982a3b8585a17f7caaa60
01:10:11 Jar: lib/server/ome-common.jar OME Common Java 6.0.25-SNAPSHOT 27 October 2024 857a3276c5e3744c713982a3b8585a17f7caaa60
01:10:11 Jar: lib/server/ome-jai.jar OME JAI 0.1.5-SNAPSHOT 27 October 2024 857a3276c5e3744c713982a3b8585a17f7caaa60
01:10:11 Jar: lib/server/ome-mdbtools.jar MDB Tools (Java port) 5.3.4-SNAPSHOT 27 October 2024 857a3276c5e3744c713982a3b8585a17f7caaa60
01:10:11 Jar: lib/server/ome-poi.jar OME POI 5.3.10-SNAPSHOT 27 October 2024 857a3276c5e3744c713982a3b8585a17f7caaa60
01:10:11 Jar: lib/server/ome-xml.jar OME XML library 6.3.7-SNAPSHOT 27 October 2024 857a3276c5e3744c713982a3b8585a17f7caaa60
01:10:11 Jar: lib/server/omero-blitz.jar jar 5.7.5-SNAPSHOT
01:10:11 Jar: lib/server/omero-common.jar jar 5.6.8-SNAPSHOT
01:10:11 Jar: lib/server/omero-gateway.jar jar 5.9.4-SNAPSHOT
01:10:11 Jar: lib/server/omero-model.jar jar 5.6.16-SNAPSHOT
01:10:11 Jar: lib/server/omero-renderer.jar jar 5.5.18-SNAPSHOT
01:10:11 Jar: lib/server/omero-romio.jar jar 5.7.8-SNAPSHOT
01:10:11 Jar: lib/server/omero-server.jar jar 5.6.13-SNAPSHOT
01:10:12 + export OMERO_SESSION_DIR=/tmp/OMERO-test-integration/209
01:10:12 + OMERO_SESSION_DIR=/tmp/OMERO-test-integration/209
01:10:12 + export ICE_CONFIG=/home/omero/workspace/OMERO-test-integration/src/dist/etc/ice.config
01:10:12 + ICE_CONFIG=/home/omero/workspace/OMERO-test-integration/src/dist/etc/ice.config
01:10:12 + echo Running the integration tests with -Dtestng.useDefaultListeners=true
01:10:12 Running the integration tests with -Dtestng.useDefaultListeners=true
01:10:12 + /home/omero/workspace/OMERO-test-integration/src/build.py -f components/tools/OmeroJava/build.xml -Dtestng.useDefaultListeners=true -Dtestreports.dir=target/reports/integration integration
01:10:12 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
01:10:12 Buildfile: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/build.xml
01:10:12 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava...
01:10:13
01:10:13 testng-init:
01:10:13 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:10:13 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
01:10:16 01:10:16,121 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
01:10:16 01:10:16,124 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - No custom configurators were discovered as a service.
01:10:16 01:10:16,124 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
01:10:16 01:10:16,128 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
01:10:16 01:10:16,129 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
01:10:16 01:10:16,129 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
01:10:16 01:10:16,130 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
01:10:16 01:10:16,130 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
01:10:16 01:10:16,132 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
01:10:16 01:10:16,133 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
01:10:16 01:10:16,133 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml]
01:10:16 01:10:16,134 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@1b560eb0 - Resource [logback.xml] occurs multiple times on the classpath.
01:10:16 01:10:16,134 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@1b560eb0 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml]
01:10:16 01:10:16,134 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@1b560eb0 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
01:10:16 01:10:16,376 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
01:10:16 01:10:16,376 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
01:10:16 01:10:16,395 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
01:10:16 01:10:16,397 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@9e02f84 - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
01:10:16 01:10:16,397 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@9e02f84 - Please move "immediateFlush" property into the enclosing appender.
01:10:16 01:10:16,463 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@9e02f84 - Setting the "immediateFlush" property of the enclosing appender to true
01:10:16 01:10:16,464 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
01:10:16 01:10:16,464 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
01:10:16 01:10:16,464 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
01:10:16 01:10:16,464 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
01:10:16 01:10:16,464 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
01:10:16 01:10:16,464 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
01:10:16 01:10:16,466 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1e6060f1 - End of configuration.
01:10:16 01:10:16,468 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7e49ded - Registering current configuration as safe fallback point
01:10:16 01:10:16,468 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 336 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
01:10:16
01:10:16 lifecycle.test-compile:
01:10:16 Deleting: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/_omero_build_685664617.tmp
01:10:16 Deleting: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/OmeroJava-test.xml
01:10:16 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
01:10:16 :: delivering :: omero#OmeroJava-test;working@bdaf9f08f5d1 :: 5.6.3-513-85571adcc5-ice36-ice36 :: integration :: Sun Oct 27 01:10:12 UTC 2024
01:10:16 delivering ivy file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/OmeroJava-test.xml
01:10:16 :: publishing :: omero#OmeroJava-test
01:10:16 published OmeroJava-test to /home/omero/workspace/OMERO-test-integration/src/target/test-repository/OmeroJava-test-5.6.3-513-85571adcc5-ice36-ice36.jar
01:10:16 published ivy to /home/omero/workspace/OMERO-test-integration/src/target/test-repository/OmeroJava-test-5.6.3-513-85571adcc5-ice36-ice36.xml
01:10:16
01:10:16 integration:
01:10:16 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
01:10:17 01:10:17,071 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
01:10:17 01:10:17,074 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - No custom configurators were discovered as a service.
01:10:17 01:10:17,074 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
01:10:17 01:10:17,075 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
01:10:17 01:10:17,076 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
01:10:17 01:10:17,077 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
01:10:17 01:10:17,078 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 3 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
01:10:17 01:10:17,078 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
01:10:17 01:10:17,078 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
01:10:17 01:10:17,079 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
01:10:17 01:10:17,080 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml]
01:10:17 01:10:17,081 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@10e31a9a - Resource [logback.xml] occurs multiple times on the classpath.
01:10:17 01:10:17,081 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@10e31a9a - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml]
01:10:17 01:10:17,081 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@10e31a9a - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
01:10:17 01:10:17,281 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
01:10:17 01:10:17,281 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
01:10:17 01:10:17,288 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
01:10:17 01:10:17,290 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@131774fe - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
01:10:17 01:10:17,290 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@131774fe - Please move "immediateFlush" property into the enclosing appender.
01:10:17 01:10:17,317 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@131774fe - Setting the "immediateFlush" property of the enclosing appender to true
01:10:17 01:10:17,318 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
01:10:17 01:10:17,318 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
01:10:17 01:10:17,318 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
01:10:17 01:10:17,318 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
01:10:17 01:10:17,318 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
01:10:17 01:10:17,318 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
01:10:17 01:10:17,319 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@158d2680 - End of configuration.
01:10:17 01:10:17,321 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@77847718 - Registering current configuration as safe fallback point
01:10:17 01:10:17,321 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 243 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
01:10:18 Oct 27, 2024 1:10:18 AM ome.system.OmeroContext prepareRefresh
01:10:18 INFO: Refreshing ome.system.OmeroContext@7f8633ae: startup date [Sun Oct 27 01:10:18 UTC 2024]; root of context hierarchy
01:10:18 Oct 27, 2024 1:10:18 AM org.springframework.beans.factory.xml.XmlBeanDefinitionReader loadBeanDefinitions
01:10:18 INFO: Loading XML bean definitions from class path resource [ome/config.xml]
01:10:35 3330615c-d8af-43fa-8533-97b7123d9428
01:15:37 2024-10-27 01:15:37,221 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:15:37 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:15:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:15:37 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:15:37 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:15:37 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:15:37 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:15:37 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:15:37 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:15:37 at java.base/java.lang.Thread.run(Thread.java:829)
01:15:37 Caused by: Ice.CommunicatorDestroyedException: null
01:15:37 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:15:37 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:15:37 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:15:37 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:15:37 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:15:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:15:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:15:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:15:37 ... 7 common frames omitted
01:15:59 2024-10-27 01:15:59,031 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
01:15:59 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:15:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:15:59 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:15:59 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:15:59 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:15:59 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:15:59 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:15:59 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:15:59 at java.base/java.lang.Thread.run(Thread.java:829)
01:15:59 Caused by: Ice.CommunicatorDestroyedException: null
01:15:59 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:15:59 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:15:59 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:15:59 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:15:59 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:15:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:15:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:15:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:15:59 ... 7 common frames omitted
01:16:05 2024-10-27 01:16:05,344 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
01:16:05 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:16:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:16:05 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:16:05 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:16:05 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:16:05 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:16:05 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:16:05 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:16:05 at java.base/java.lang.Thread.run(Thread.java:829)
01:16:05 Caused by: Ice.CommunicatorDestroyedException: null
01:16:05 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:16:05 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:16:05 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:16:05 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:16:05 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:16:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:16:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:16:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:16:05 ... 7 common frames omitted
01:16:40 2024-10-27 01:16:40,802 ERROR [ ome.formats.importer.ImportLibrary] (sDataset-1) Cannot link to target
01:16:54 2024-10-27 01:16:54,968 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:16:54 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:16:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:16:54 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:16:54 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:16:54 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:16:54 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:16:54 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:16:54 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
01:16:54 Caused by: Ice.CommunicatorDestroyedException: null
01:16:54 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:16:54 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:16:54 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:16:54 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:16:54 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:16:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:16:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:16:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:16:54 ... 7 common frames omitted
01:17:19 2024-10-27 01:17:19,361 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
01:17:19 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:17:19 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:17:19 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:17:19 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:17:19 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:17:19 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:17:19 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:17:19 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:17:19 at java.base/java.lang.Thread.run(Thread.java:829)
01:17:19 Caused by: Ice.CommunicatorDestroyedException: null
01:17:19 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:17:19 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:17:19 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:17:19 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:17:19 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:17:19 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:17:19 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:17:19 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:17:19 ... 7 common frames omitted
01:20:52 2024-10-27 01:20:52,860 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
01:20:52 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:20:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:20:52 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:20:52 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:20:52 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:20:52 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:20:52 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:20:52 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:20:52 at java.base/java.lang.Thread.run(Thread.java:829)
01:20:52 Caused by: Ice.CommunicatorDestroyedException: null
01:20:52 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:20:52 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:20:52 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:20:52 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:20:52 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:20:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:20:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:20:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:20:52 ... 7 common frames omitted
01:20:54 2024-10-27 01:20:54,101 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:20:54 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:20:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:20:54 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:20:54 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:20:54 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:20:54 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:20:54 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:20:54 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:20:54 at java.base/java.lang.Thread.run(Thread.java:829)
01:20:54 Caused by: Ice.CommunicatorDestroyedException: null
01:20:54 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:20:54 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:20:54 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:20:54 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:20:54 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:20:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:20:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:20:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:20:54 ... 7 common frames omitted
01:20:55 2024-10-27 01:20:55,301 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:20:55 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:20:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:20:55 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:20:55 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:20:55 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:20:55 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:20:55 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:20:55 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:20:55 at java.base/java.lang.Thread.run(Thread.java:829)
01:20:55 Caused by: Ice.CommunicatorDestroyedException: null
01:20:55 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:20:55 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:20:55 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:20:55 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:20:55 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:20:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:20:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:20:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:20:55 ... 7 common frames omitted
01:20:59 2024-10-27 01:20:59,751 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:20:59 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:20:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:20:59 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:20:59 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:20:59 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:20:59 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:20:59 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:20:59 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:20:59 at java.base/java.lang.Thread.run(Thread.java:829)
01:20:59 Caused by: Ice.CommunicatorDestroyedException: null
01:20:59 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:20:59 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:20:59 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:20:59 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:20:59 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:20:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:20:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:20:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:20:59 ... 7 common frames omitted
01:21:00 2024-10-27 01:21:00,808 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:21:00 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:00 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:00 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:00 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:00 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:00 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:00 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:00 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:00 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:00 Caused by: Ice.CommunicatorDestroyedException: null
01:21:00 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:00 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:00 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:00 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:00 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:00 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:00 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:00 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:00 ... 7 common frames omitted
01:21:01 2024-10-27 01:21:01,584 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:21:01 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:01 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:01 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:01 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:01 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:01 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:01 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:01 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:01 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:01 Caused by: Ice.CommunicatorDestroyedException: null
01:21:01 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:01 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:01 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:01 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:01 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:01 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:01 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:01 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:01 ... 7 common frames omitted
01:21:02 2024-10-27 01:21:02,567 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:21:02 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:02 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:02 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:02 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:02 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:02 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:02 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:02 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:02 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:02 Caused by: Ice.CommunicatorDestroyedException: null
01:21:02 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:02 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:02 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:02 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:02 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:02 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:02 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:02 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:02 ... 7 common frames omitted
01:21:03 2024-10-27 01:21:03,501 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
01:21:03 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:03 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:03 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:03 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:03 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:03 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:03 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:03 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:03 Caused by: Ice.CommunicatorDestroyedException: null
01:21:03 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:03 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:03 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:03 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:03 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:03 ... 7 common frames omitted
01:21:04 2024-10-27 01:21:04,247 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:21:04 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:04 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:04 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:04 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:04 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:04 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:04 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:04 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:04 Caused by: Ice.CommunicatorDestroyedException: null
01:21:04 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:04 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:04 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:04 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:04 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:04 ... 7 common frames omitted
01:21:04 2024-10-27 01:21:04,942 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:21:04 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:04 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:04 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:04 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:04 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:04 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:04 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:04 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:04 Caused by: Ice.CommunicatorDestroyedException: null
01:21:04 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:04 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:04 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:04 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:04 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:04 ... 7 common frames omitted
01:21:05 2024-10-27 01:21:05,622 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:21:05 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:05 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:05 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:05 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:05 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:05 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:05 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:05 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:05 Caused by: Ice.CommunicatorDestroyedException: null
01:21:05 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:05 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:05 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:05 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:05 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:05 ... 7 common frames omitted
01:21:06 2024-10-27 01:21:06,303 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:21:06 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:06 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:06 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:06 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:06 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:06 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:06 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:06 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:06 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:06 Caused by: Ice.CommunicatorDestroyedException: null
01:21:06 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:06 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:06 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:06 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:06 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:06 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:06 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:06 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:06 ... 7 common frames omitted
01:21:07 2024-10-27 01:21:07,168 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
01:21:07 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:07 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:07 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:07 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:07 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:07 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:07 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:07 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:07 Caused by: Ice.CommunicatorDestroyedException: null
01:21:07 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:07 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:07 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:07 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:07 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:07 ... 7 common frames omitted
01:21:07 2024-10-27 01:21:07,951 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:21:07 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:07 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:07 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:07 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:07 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:07 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:07 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:07 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:07 Caused by: Ice.CommunicatorDestroyedException: null
01:21:07 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:07 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:07 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:07 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:07 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:07 ... 7 common frames omitted
01:21:08 2024-10-27 01:21:08,833 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:21:08 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:08 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:08 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:08 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:08 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:08 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:08 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:08 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:08 Caused by: Ice.CommunicatorDestroyedException: null
01:21:08 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:08 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:08 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:08 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:08 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:08 ... 7 common frames omitted
01:21:09 2024-10-27 01:21:09,633 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:21:09 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:09 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:09 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:09 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:09 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:09 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:09 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:09 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:09 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:09 Caused by: Ice.CommunicatorDestroyedException: null
01:21:09 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:09 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:09 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:09 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:09 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:09 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:09 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:09 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:09 ... 7 common frames omitted
01:21:10 2024-10-27 01:21:10,426 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:21:10 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:10 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:10 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:10 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:10 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:10 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:10 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:10 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:10 Caused by: Ice.CommunicatorDestroyedException: null
01:21:10 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:10 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:10 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:10 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:10 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:10 ... 7 common frames omitted
01:21:11 2024-10-27 01:21:11,210 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:21:11 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:11 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:11 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:11 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:11 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:11 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:11 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:11 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:11 Caused by: Ice.CommunicatorDestroyedException: null
01:21:11 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:11 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:11 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:11 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:11 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:11 ... 7 common frames omitted
01:21:11 2024-10-27 01:21:11,933 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
01:21:11 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:11 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:11 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:11 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:11 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:11 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:11 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:11 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:11 Caused by: Ice.CommunicatorDestroyedException: null
01:21:11 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:11 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:11 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:11 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:11 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:11 ... 7 common frames omitted
01:21:12 2024-10-27 01:21:12,589 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:21:12 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:12 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:12 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:12 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:12 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:12 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:12 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:12 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:12 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:12 Caused by: Ice.CommunicatorDestroyedException: null
01:21:12 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:12 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:12 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:12 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:12 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:12 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:12 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:12 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:12 ... 7 common frames omitted
01:21:13 2024-10-27 01:21:13,296 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
01:21:13 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:13 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:13 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:13 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:13 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:13 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:13 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:13 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:13 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:13 Caused by: Ice.CommunicatorDestroyedException: null
01:21:13 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:13 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:13 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:13 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:13 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:13 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:13 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:13 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:13 ... 7 common frames omitted
01:21:14 2024-10-27 01:21:14,012 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:21:14 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:14 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:14 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:14 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:14 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:14 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:14 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:14 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:14 Caused by: Ice.CommunicatorDestroyedException: null
01:21:14 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:14 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:14 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:14 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:14 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:14 ... 7 common frames omitted
01:21:14 2024-10-27 01:21:14,813 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
01:21:14 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:14 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:14 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:14 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:14 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:14 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:14 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:14 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:14 Caused by: Ice.CommunicatorDestroyedException: null
01:21:14 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:14 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:14 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:14 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:14 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:14 ... 7 common frames omitted
01:21:15 2024-10-27 01:21:15,584 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
01:21:15 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:15 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:15 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:15 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:15 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:15 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:15 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:15 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:15 Caused by: Ice.CommunicatorDestroyedException: null
01:21:15 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:15 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:15 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:15 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:15 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:15 ... 7 common frames omitted
01:21:16 2024-10-27 01:21:16,276 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
01:21:16 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:16 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:16 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:16 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:16 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:16 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:16 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:16 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:16 Caused by: Ice.CommunicatorDestroyedException: null
01:21:16 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:16 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:16 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:16 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:16 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:16 ... 7 common frames omitted
01:21:16 2024-10-27 01:21:16,987 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:21:16 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:16 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:16 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:16 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:16 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:16 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:16 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:16 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:16 Caused by: Ice.CommunicatorDestroyedException: null
01:21:16 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:16 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:16 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:16 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:16 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:16 ... 7 common frames omitted
01:21:17 2024-10-27 01:21:17,600 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:21:17 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:17 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:17 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:17 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:17 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:17 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:17 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:17 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:17 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:17 Caused by: Ice.CommunicatorDestroyedException: null
01:21:17 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:17 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:17 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:17 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:17 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:17 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:17 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:17 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:17 ... 7 common frames omitted
01:21:18 2024-10-27 01:21:18,363 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:21:18 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:18 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:18 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:18 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:18 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:18 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:18 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:18 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:18 Caused by: Ice.CommunicatorDestroyedException: null
01:21:18 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:18 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:18 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:18 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:18 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:18 ... 7 common frames omitted
01:21:19 2024-10-27 01:21:19,499 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
01:21:19 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:19 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:19 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:19 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:19 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:19 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:19 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:19 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:19 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:19 Caused by: Ice.CommunicatorDestroyedException: null
01:21:19 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:19 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:19 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:19 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:19 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:19 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:19 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:19 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:19 ... 7 common frames omitted
01:21:20 2024-10-27 01:21:20,724 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:21:20 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:20 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:20 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:20 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:20 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:20 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:20 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:20 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:20 Caused by: Ice.CommunicatorDestroyedException: null
01:21:20 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:20 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:20 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:20 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:20 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:20 ... 7 common frames omitted
01:21:21 2024-10-27 01:21:21,775 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
01:21:21 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:21 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:21 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:21 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:21 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:21 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:21 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:21 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:21 Caused by: Ice.CommunicatorDestroyedException: null
01:21:21 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:21 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:21 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:21 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:21 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:21 ... 7 common frames omitted
01:21:22 2024-10-27 01:21:22,908 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:21:22 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:22 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:22 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:22 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:22 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:22 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:22 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:22 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:22 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:22 Caused by: Ice.CommunicatorDestroyedException: null
01:21:22 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:22 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:22 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:22 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:22 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:22 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:22 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:22 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:22 ... 7 common frames omitted
01:21:23 2024-10-27 01:21:23,908 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
01:21:23 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:23 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:23 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:23 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:23 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:23 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:23 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:23 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:23 Caused by: Ice.CommunicatorDestroyedException: null
01:21:23 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:23 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:23 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:23 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:23 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:23 ... 7 common frames omitted
01:21:25 2024-10-27 01:21:25,002 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
01:21:25 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:25 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:25 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:25 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:25 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:25 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:25 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:25 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:25 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:25 Caused by: Ice.CommunicatorDestroyedException: null
01:21:25 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:25 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:25 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:25 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:25 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:25 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:25 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:25 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:25 ... 7 common frames omitted
01:21:26 2024-10-27 01:21:26,057 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
01:21:26 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:26 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:26 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:26 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:26 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:26 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:26 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:26 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:26 Caused by: Ice.CommunicatorDestroyedException: null
01:21:26 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:26 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:26 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:26 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:26 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:26 ... 7 common frames omitted
01:21:27 2024-10-27 01:21:27,108 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:21:27 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:27 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:27 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:27 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:27 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:27 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:27 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:27 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:27 Caused by: Ice.CommunicatorDestroyedException: null
01:21:27 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:27 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:27 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:27 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:27 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:27 ... 7 common frames omitted
01:21:28 2024-10-27 01:21:28,059 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:21:28 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:28 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:28 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:28 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:28 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:28 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:28 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:28 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:28 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:28 Caused by: Ice.CommunicatorDestroyedException: null
01:21:28 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:28 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:28 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:28 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:28 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:28 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:28 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:28 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:28 ... 7 common frames omitted
01:21:29 2024-10-27 01:21:29,247 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:21:29 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:29 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:29 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:29 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:29 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:29 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:29 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:29 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:29 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:29 Caused by: Ice.CommunicatorDestroyedException: null
01:21:29 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:29 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:29 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:29 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:29 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:29 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:29 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:29 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:29 ... 7 common frames omitted
01:21:30 2024-10-27 01:21:30,070 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
01:21:30 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:30 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:30 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:30 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:30 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:30 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:30 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:30 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:30 Caused by: Ice.CommunicatorDestroyedException: null
01:21:30 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:30 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:30 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:30 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:30 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:30 ... 7 common frames omitted
01:21:34 2024-10-27 01:21:34,264 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:21:34 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:34 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:34 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:34 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:34 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:34 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:34 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:34 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:34 Caused by: Ice.CommunicatorDestroyedException: null
01:21:34 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:34 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:34 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:34 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:34 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:34 ... 7 common frames omitted
01:21:35 2024-10-27 01:21:35,254 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
01:21:35 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:35 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:35 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:35 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:35 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:35 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:35 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:35 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:35 Caused by: Ice.CommunicatorDestroyedException: null
01:21:35 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:35 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:35 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:35 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:35 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:35 ... 7 common frames omitted
01:21:36 2024-10-27 01:21:36,985 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:21:36 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:36 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:36 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:36 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:36 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:36 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:36 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:36 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:36 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:36 Caused by: Ice.CommunicatorDestroyedException: null
01:21:36 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:36 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:36 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:36 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:36 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:36 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:36 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:36 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:36 ... 7 common frames omitted
01:21:38 2024-10-27 01:21:38,364 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
01:21:38 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:38 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:38 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:38 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:38 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:38 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:38 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:38 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:38 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:38 Caused by: Ice.CommunicatorDestroyedException: null
01:21:38 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:38 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:38 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:38 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:38 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:38 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:38 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:38 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:38 ... 7 common frames omitted
01:21:39 2024-10-27 01:21:39,393 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
01:21:39 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:39 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:39 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:39 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:39 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:39 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:39 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:39 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:39 Caused by: Ice.CommunicatorDestroyedException: null
01:21:39 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:39 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:39 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:39 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:39 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:39 ... 7 common frames omitted
01:21:40 2024-10-27 01:21:40,783 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:21:40 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:40 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:40 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:40 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:40 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:40 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:40 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:40 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:40 Caused by: Ice.CommunicatorDestroyedException: null
01:21:40 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:40 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:40 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:40 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:40 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:40 ... 7 common frames omitted
01:21:41 2024-10-27 01:21:41,253 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
01:21:41 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:41 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:41 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:41 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:41 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:41 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:41 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:41 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:41 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:41 Caused by: Ice.CommunicatorDestroyedException: null
01:21:41 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:41 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:41 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:41 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:41 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:41 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:41 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:41 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:41 ... 7 common frames omitted
01:21:42 2024-10-27 01:21:42,895 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
01:21:42 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:42 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:42 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:42 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:42 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:42 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:42 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:42 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:42 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:42 Caused by: Ice.CommunicatorDestroyedException: null
01:21:42 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:42 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:42 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:42 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:42 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:42 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:42 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:42 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:42 ... 7 common frames omitted
01:21:44 2024-10-27 01:21:44,312 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
01:21:44 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:44 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:44 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:44 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:44 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:44 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:44 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:44 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:44 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:44 Caused by: Ice.CommunicatorDestroyedException: null
01:21:44 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:44 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:44 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:44 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:44 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:44 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:44 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:44 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:44 ... 7 common frames omitted
01:21:46 2024-10-27 01:21:46,657 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
01:21:46 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:46 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:46 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:46 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:46 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:46 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:46 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:46 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:46 Caused by: Ice.CommunicatorDestroyedException: null
01:21:46 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:46 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:46 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:46 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:46 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:46 ... 7 common frames omitted
01:21:48 2024-10-27 01:21:48,204 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:21:48 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:48 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:48 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:48 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:48 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:48 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:48 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:48 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:48 Caused by: Ice.CommunicatorDestroyedException: null
01:21:48 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:48 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:48 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:48 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:48 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:48 ... 7 common frames omitted
01:21:49 2024-10-27 01:21:49,703 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
01:21:49 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:49 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:49 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:49 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:49 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:49 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:49 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:49 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:49 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:49 Caused by: Ice.CommunicatorDestroyedException: null
01:21:49 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:49 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:49 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:49 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:49 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:49 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:49 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:49 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:49 ... 7 common frames omitted
01:21:53 2024-10-27 01:21:53,161 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
01:21:53 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:53 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:53 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:53 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:53 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:53 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:53 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:53 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:53 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:53 Caused by: Ice.CommunicatorDestroyedException: null
01:21:53 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:53 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:53 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:53 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:53 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:53 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:53 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:53 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:53 ... 7 common frames omitted
01:21:57 2024-10-27 01:21:57,628 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
01:21:57 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:57 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:57 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:57 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:57 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:57 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:57 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:57 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:57 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:57 Caused by: Ice.CommunicatorDestroyedException: null
01:21:57 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:57 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:57 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:57 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:57 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:57 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:57 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:57 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:57 ... 7 common frames omitted
01:21:58 2024-10-27 01:21:58,385 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
01:21:58 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:58 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:58 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:58 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:58 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:58 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:58 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:58 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:58 Caused by: Ice.CommunicatorDestroyedException: null
01:21:58 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:58 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:58 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:58 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:58 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:58 ... 7 common frames omitted
01:21:59 2024-10-27 01:21:59,176 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:21:59 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:21:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:21:59 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:21:59 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:21:59 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:21:59 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:21:59 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:21:59 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:21:59 at java.base/java.lang.Thread.run(Thread.java:829)
01:21:59 Caused by: Ice.CommunicatorDestroyedException: null
01:21:59 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:21:59 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:21:59 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:21:59 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:21:59 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:21:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:21:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:21:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:21:59 ... 7 common frames omitted
01:22:00 2024-10-27 01:22:00,156 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
01:22:00 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:22:00 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:22:00 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:22:00 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:22:00 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:22:00 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:22:00 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:22:00 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:22:00 at java.base/java.lang.Thread.run(Thread.java:829)
01:22:00 Caused by: Ice.CommunicatorDestroyedException: null
01:22:00 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:22:00 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:22:00 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:22:00 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:22:00 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:22:00 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:22:00 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:22:00 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:22:00 ... 7 common frames omitted
01:23:30 2024-10-27 01:23:30,322 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
01:23:30 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:23:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:23:30 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:23:30 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:23:30 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:23:30 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:23:30 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:23:30 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:23:30 at java.base/java.lang.Thread.run(Thread.java:829)
01:23:30 Caused by: Ice.CommunicatorDestroyedException: null
01:23:30 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:23:30 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:23:30 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:23:30 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:23:30 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:23:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:23:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:23:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:23:30 ... 7 common frames omitted
01:23:32 2024-10-27 01:23:32,054 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:23:32 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:23:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:23:32 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:23:32 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:23:32 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:23:32 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:23:32 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:23:32 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:23:32 at java.base/java.lang.Thread.run(Thread.java:829)
01:23:32 Caused by: Ice.CommunicatorDestroyedException: null
01:23:32 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:23:32 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:23:32 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:23:32 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:23:32 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:23:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:23:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:23:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:23:32 ... 7 common frames omitted
01:23:33 2024-10-27 01:23:33,583 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
01:23:33 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:23:33 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:23:33 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:23:33 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:23:33 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:23:33 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:23:33 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:23:33 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:23:33 at java.base/java.lang.Thread.run(Thread.java:829)
01:23:33 Caused by: Ice.CommunicatorDestroyedException: null
01:23:33 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:23:33 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:23:33 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:23:33 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:23:33 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:23:33 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:23:33 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:23:33 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:23:33 ... 7 common frames omitted
01:23:35 2024-10-27 01:23:35,159 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:23:35 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:23:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:23:35 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:23:35 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:23:35 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:23:35 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:23:35 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:23:35 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:23:35 at java.base/java.lang.Thread.run(Thread.java:829)
01:23:35 Caused by: Ice.CommunicatorDestroyedException: null
01:23:35 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:23:35 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:23:35 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:23:35 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:23:35 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:23:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:23:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:23:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:23:35 ... 7 common frames omitted
01:23:37 2024-10-27 01:23:37,024 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
01:23:37 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:23:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:23:37 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:23:37 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:23:37 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:23:37 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:23:37 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:23:37 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:23:37 at java.base/java.lang.Thread.run(Thread.java:829)
01:23:37 Caused by: Ice.CommunicatorDestroyedException: null
01:23:37 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:23:37 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:23:37 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:23:37 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:23:37 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:23:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:23:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:23:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:23:37 ... 7 common frames omitted
01:23:38 2024-10-27 01:23:38,357 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:23:38 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:23:38 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:23:38 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:23:38 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:23:38 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:23:38 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:23:38 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:23:38 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:23:38 at java.base/java.lang.Thread.run(Thread.java:829)
01:23:38 Caused by: Ice.CommunicatorDestroyedException: null
01:23:38 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:23:38 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:23:38 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:23:38 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:23:38 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:23:38 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:23:38 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:23:38 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:23:38 ... 7 common frames omitted
01:23:40 2024-10-27 01:23:40,003 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:23:40 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:23:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:23:40 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:23:40 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:23:40 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:23:40 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:23:40 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:23:40 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:23:40 at java.base/java.lang.Thread.run(Thread.java:829)
01:23:40 Caused by: Ice.CommunicatorDestroyedException: null
01:23:40 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:23:40 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:23:40 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:23:40 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:23:40 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:23:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:23:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:23:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:23:40 ... 7 common frames omitted
01:23:41 2024-10-27 01:23:41,490 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
01:23:41 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:23:41 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:23:41 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:23:41 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:23:41 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:23:41 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:23:41 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:23:41 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:23:41 at java.base/java.lang.Thread.run(Thread.java:829)
01:23:41 Caused by: Ice.CommunicatorDestroyedException: null
01:23:41 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:23:41 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:23:41 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:23:41 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:23:41 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:23:41 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:23:41 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:23:41 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:23:41 ... 7 common frames omitted
01:27:02 2024-10-27 01:27:02,983 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
01:27:02 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:27:02 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:27:02 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:27:02 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:27:02 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:27:02 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:27:02 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:27:02 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:27:02 at java.base/java.lang.Thread.run(Thread.java:829)
01:27:02 Caused by: Ice.CommunicatorDestroyedException: null
01:27:02 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:27:02 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:27:02 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:27:02 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:27:02 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:27:02 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:27:02 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:27:02 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:27:02 ... 7 common frames omitted
01:27:03 2024-10-27 01:27:03,829 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:27:03 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:27:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:27:03 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:27:03 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:27:03 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:27:03 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:27:03 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:27:03 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:27:03 at java.base/java.lang.Thread.run(Thread.java:829)
01:27:03 Caused by: Ice.CommunicatorDestroyedException: null
01:27:03 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:27:03 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:27:03 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:27:03 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:27:03 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:27:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:27:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:27:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:27:03 ... 7 common frames omitted
01:27:05 2024-10-27 01:27:05,363 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
01:27:05 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:27:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:27:05 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:27:05 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:27:05 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:27:05 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:27:05 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:27:05 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:27:05 at java.base/java.lang.Thread.run(Thread.java:829)
01:27:05 Caused by: Ice.CommunicatorDestroyedException: null
01:27:05 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:27:05 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:27:05 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:27:05 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:27:05 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:27:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:27:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:27:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:27:05 ... 7 common frames omitted
01:27:06 2024-10-27 01:27:06,760 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:27:06 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:27:06 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:27:06 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:27:06 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:27:06 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:27:06 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:27:06 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:27:06 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:27:06 at java.base/java.lang.Thread.run(Thread.java:829)
01:27:06 Caused by: Ice.CommunicatorDestroyedException: null
01:27:06 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:27:06 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:27:06 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:27:06 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:27:06 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:27:06 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:27:06 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:27:06 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:27:06 ... 7 common frames omitted
01:27:07 2024-10-27 01:27:07,112 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
01:27:07 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:27:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:27:07 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:27:07 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:27:07 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:27:07 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:27:07 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:27:07 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:27:07 at java.base/java.lang.Thread.run(Thread.java:829)
01:27:07 Caused by: Ice.CommunicatorDestroyedException: null
01:27:07 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:27:07 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:27:07 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:27:07 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:27:07 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:27:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:27:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:27:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:27:07 ... 7 common frames omitted
01:27:08 2024-10-27 01:27:08,450 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:27:08 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:27:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:27:08 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:27:08 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:27:08 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:27:08 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:27:08 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:27:08 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:27:08 at java.base/java.lang.Thread.run(Thread.java:829)
01:27:08 Caused by: Ice.CommunicatorDestroyedException: null
01:27:08 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:27:08 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:27:08 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:27:08 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:27:08 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:27:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:27:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:27:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:27:08 ... 7 common frames omitted
01:27:10 2024-10-27 01:27:10,182 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
01:27:10 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:27:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:27:10 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:27:10 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:27:10 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:27:10 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:27:10 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:27:10 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:27:10 at java.base/java.lang.Thread.run(Thread.java:829)
01:27:10 Caused by: Ice.CommunicatorDestroyedException: null
01:27:10 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:27:10 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:27:10 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:27:10 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:27:10 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:27:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:27:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:27:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:27:10 ... 7 common frames omitted
01:27:11 2024-10-27 01:27:11,857 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:27:11 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:27:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:27:11 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:27:11 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:27:11 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:27:11 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:27:11 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:27:11 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:27:11 at java.base/java.lang.Thread.run(Thread.java:829)
01:27:11 Caused by: Ice.CommunicatorDestroyedException: null
01:27:11 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:27:11 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:27:11 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:27:11 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:27:11 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:27:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:27:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:27:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:27:11 ... 7 common frames omitted
01:27:14 2024-10-27 01:27:14,123 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:27:14 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:27:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:27:14 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:27:14 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:27:14 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:27:14 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:27:14 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:27:14 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:27:14 at java.base/java.lang.Thread.run(Thread.java:829)
01:27:14 Caused by: Ice.CommunicatorDestroyedException: null
01:27:14 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:27:14 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:27:14 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:27:14 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:27:14 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:27:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:27:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:27:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:27:14 ... 7 common frames omitted
01:27:15 2024-10-27 01:27:15,492 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
01:27:15 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:27:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:27:15 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:27:15 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:27:15 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:27:15 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:27:15 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:27:15 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:27:15 at java.base/java.lang.Thread.run(Thread.java:829)
01:27:15 Caused by: Ice.CommunicatorDestroyedException: null
01:27:15 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:27:15 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:27:15 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:27:15 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:27:15 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:27:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:27:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:27:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:27:15 ... 7 common frames omitted
01:27:17 2024-10-27 01:27:17,005 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
01:27:17 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:27:17 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:27:17 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:27:17 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:27:17 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:27:17 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:27:17 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:27:17 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:27:17 at java.base/java.lang.Thread.run(Thread.java:829)
01:27:17 Caused by: Ice.CommunicatorDestroyedException: null
01:27:17 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:27:17 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:27:17 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:27:17 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:27:17 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:27:17 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:27:17 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:27:17 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:27:17 ... 7 common frames omitted
01:27:18 2024-10-27 01:27:18,441 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:27:18 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:27:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:27:18 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:27:18 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:27:18 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:27:18 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:27:18 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:27:18 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:27:18 at java.base/java.lang.Thread.run(Thread.java:829)
01:27:18 Caused by: Ice.CommunicatorDestroyedException: null
01:27:18 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:27:18 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:27:18 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:27:18 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:27:18 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:27:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:27:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:27:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:27:18 ... 7 common frames omitted
01:27:59 2024-10-27 01:27:59,566 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
01:27:59 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:27:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:27:59 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:27:59 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:27:59 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:27:59 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:27:59 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:27:59 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:27:59 at java.base/java.lang.Thread.run(Thread.java:829)
01:27:59 Caused by: Ice.CommunicatorDestroyedException: null
01:27:59 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:27:59 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:27:59 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:27:59 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:27:59 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:27:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:27:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:27:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:27:59 ... 7 common frames omitted
01:28:01 2024-10-27 01:28:01,852 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:28:01 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:28:01 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:28:01 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:28:01 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:28:01 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:28:01 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:28:01 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:28:01 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:28:01 at java.base/java.lang.Thread.run(Thread.java:829)
01:28:01 Caused by: Ice.CommunicatorDestroyedException: null
01:28:01 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:28:01 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:28:01 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:28:01 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:28:01 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:28:01 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:28:01 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:28:01 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:28:01 ... 7 common frames omitted
01:28:03 2024-10-27 01:28:03,808 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
01:28:03 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:28:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:28:03 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:28:03 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:28:03 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:28:03 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:28:03 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:28:03 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:28:03 at java.base/java.lang.Thread.run(Thread.java:829)
01:28:03 Caused by: Ice.CommunicatorDestroyedException: null
01:28:03 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:28:03 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:28:03 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:28:03 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:28:03 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:28:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:28:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:28:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:28:03 ... 7 common frames omitted
01:28:05 2024-10-27 01:28:05,828 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:28:05 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:28:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:28:05 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:28:05 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:28:05 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:28:05 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:28:05 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:28:05 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:28:05 at java.base/java.lang.Thread.run(Thread.java:829)
01:28:05 Caused by: Ice.CommunicatorDestroyedException: null
01:28:05 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:28:05 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:28:05 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:28:05 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:28:05 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:28:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:28:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:28:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:28:05 ... 7 common frames omitted
01:28:07 2024-10-27 01:28:07,801 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
01:28:07 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:28:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:28:07 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:28:07 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:28:07 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:28:07 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:28:07 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:28:07 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:28:07 at java.base/java.lang.Thread.run(Thread.java:829)
01:28:07 Caused by: Ice.CommunicatorDestroyedException: null
01:28:07 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:28:07 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:28:07 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:28:07 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:28:07 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:28:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:28:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:28:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:28:07 ... 7 common frames omitted
01:28:11 2024-10-27 01:28:11,339 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:28:11 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:28:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:28:11 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:28:11 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:28:11 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:28:11 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:28:11 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:28:11 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:28:11 at java.base/java.lang.Thread.run(Thread.java:829)
01:28:11 Caused by: Ice.CommunicatorDestroyedException: null
01:28:11 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:28:11 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:28:11 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:28:11 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:28:11 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:28:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:28:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:28:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:28:11 ... 7 common frames omitted
01:28:14 2024-10-27 01:28:14,445 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:28:14 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:28:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:28:14 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:28:14 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:28:14 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:28:14 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:28:14 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:28:14 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:28:14 at java.base/java.lang.Thread.run(Thread.java:829)
01:28:14 Caused by: Ice.CommunicatorDestroyedException: null
01:28:14 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:28:14 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:28:14 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:28:14 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:28:14 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:28:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:28:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:28:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:28:14 ... 7 common frames omitted
01:28:17 2024-10-27 01:28:17,627 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
01:28:17 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:28:17 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:28:17 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:28:17 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:28:17 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:28:17 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:28:17 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:28:17 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:28:17 at java.base/java.lang.Thread.run(Thread.java:829)
01:28:17 Caused by: Ice.CommunicatorDestroyedException: null
01:28:17 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:28:17 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:28:17 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:28:17 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:28:17 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:28:17 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:28:17 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:28:17 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:28:17 ... 7 common frames omitted
01:28:20 2024-10-27 01:28:20,742 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
01:28:20 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:28:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:28:20 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:28:20 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:28:20 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:28:20 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:28:20 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:28:20 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:28:20 at java.base/java.lang.Thread.run(Thread.java:829)
01:28:20 Caused by: Ice.CommunicatorDestroyedException: null
01:28:20 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:28:20 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:28:20 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:28:20 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:28:20 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:28:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:28:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:28:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:28:20 ... 7 common frames omitted
01:28:23 2024-10-27 01:28:23,479 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:28:23 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:28:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:28:23 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:28:23 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:28:23 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:28:23 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:28:23 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:28:23 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:28:23 at java.base/java.lang.Thread.run(Thread.java:829)
01:28:23 Caused by: Ice.CommunicatorDestroyedException: null
01:28:23 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:28:23 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:28:23 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:28:23 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:28:23 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:28:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:28:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:28:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:28:23 ... 7 common frames omitted
01:28:25 2024-10-27 01:28:25,683 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
01:28:25 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:28:25 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:28:25 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:28:25 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:28:25 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:28:25 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:28:25 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:28:25 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:28:25 at java.base/java.lang.Thread.run(Thread.java:829)
01:28:25 Caused by: Ice.CommunicatorDestroyedException: null
01:28:25 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:28:25 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:28:25 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:28:25 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:28:25 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:28:25 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:28:25 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:28:25 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:28:25 ... 7 common frames omitted
01:28:27 2024-10-27 01:28:27,980 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:28:27 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:28:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:28:27 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:28:27 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:28:27 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:28:27 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:28:27 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:28:27 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:28:27 at java.base/java.lang.Thread.run(Thread.java:829)
01:28:27 Caused by: Ice.CommunicatorDestroyedException: null
01:28:27 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:28:27 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:28:27 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:28:27 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:28:27 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:28:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:28:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:28:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:28:27 ... 7 common frames omitted
01:28:30 2024-10-27 01:28:30,269 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
01:28:30 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:28:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:28:30 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:28:30 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:28:30 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:28:30 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:28:30 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:28:30 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:28:30 at java.base/java.lang.Thread.run(Thread.java:829)
01:28:30 Caused by: Ice.CommunicatorDestroyedException: null
01:28:30 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:28:30 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:28:30 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:28:30 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:28:30 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:28:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:28:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:28:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:28:30 ... 7 common frames omitted
01:28:32 2024-10-27 01:28:32,616 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:28:32 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:28:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:28:32 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:28:32 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:28:32 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:28:32 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:28:32 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:28:32 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:28:32 at java.base/java.lang.Thread.run(Thread.java:829)
01:28:32 Caused by: Ice.CommunicatorDestroyedException: null
01:28:32 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:28:32 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:28:32 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:28:32 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:28:32 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:28:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:28:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:28:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:28:32 ... 7 common frames omitted
01:28:35 2024-10-27 01:28:35,001 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
01:28:35 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:28:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:28:35 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:28:35 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:28:35 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:28:35 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:28:35 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:28:35 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:28:35 at java.base/java.lang.Thread.run(Thread.java:829)
01:28:35 Caused by: Ice.CommunicatorDestroyedException: null
01:28:35 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:28:35 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:28:35 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:28:35 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:28:35 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:28:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:28:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:28:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:28:35 ... 7 common frames omitted
01:28:37 2024-10-27 01:28:37,239 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:28:37 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:28:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:28:37 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:28:37 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:28:37 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:28:37 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:28:37 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:28:37 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:28:37 at java.base/java.lang.Thread.run(Thread.java:829)
01:28:37 Caused by: Ice.CommunicatorDestroyedException: null
01:28:37 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:28:37 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:28:37 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:28:37 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:28:37 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:28:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:28:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:28:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:28:37 ... 7 common frames omitted
01:28:39 2024-10-27 01:28:39,850 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:28:39 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:28:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:28:39 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:28:39 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:28:39 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:28:39 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:28:39 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:28:39 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:28:39 at java.base/java.lang.Thread.run(Thread.java:829)
01:28:39 Caused by: Ice.CommunicatorDestroyedException: null
01:28:39 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:28:39 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:28:39 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:28:39 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:28:39 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:28:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:28:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:28:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:28:39 ... 7 common frames omitted
01:28:42 2024-10-27 01:28:42,194 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
01:28:42 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:28:42 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:28:42 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:28:42 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:28:42 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:28:42 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:28:42 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:28:42 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:28:42 at java.base/java.lang.Thread.run(Thread.java:829)
01:28:42 Caused by: Ice.CommunicatorDestroyedException: null
01:28:42 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:28:42 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:28:42 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:28:42 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:28:42 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:28:42 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:28:42 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:28:42 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:28:42 ... 7 common frames omitted
01:28:44 2024-10-27 01:28:44,509 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
01:28:44 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:28:44 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:28:44 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:28:44 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:28:44 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:28:44 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:28:44 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:28:44 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:28:44 at java.base/java.lang.Thread.run(Thread.java:829)
01:28:44 Caused by: Ice.CommunicatorDestroyedException: null
01:28:44 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:28:44 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:28:44 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:28:44 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:28:44 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:28:44 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:28:44 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:28:44 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:28:44 ... 7 common frames omitted
01:28:46 2024-10-27 01:28:46,764 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:28:46 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:28:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:28:46 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:28:46 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:28:46 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:28:46 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:28:46 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:28:46 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:28:46 at java.base/java.lang.Thread.run(Thread.java:829)
01:28:46 Caused by: Ice.CommunicatorDestroyedException: null
01:28:46 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:28:46 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:28:46 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:28:46 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:28:46 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:28:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:28:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:28:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:28:46 ... 7 common frames omitted
01:28:48 2024-10-27 01:28:48,982 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
01:28:48 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:28:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:28:48 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:28:48 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:28:48 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:28:48 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:28:48 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:28:48 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:28:48 at java.base/java.lang.Thread.run(Thread.java:829)
01:28:48 Caused by: Ice.CommunicatorDestroyedException: null
01:28:48 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:28:48 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:28:48 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:28:48 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:28:48 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:28:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:28:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:28:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:28:48 ... 7 common frames omitted
01:28:52 2024-10-27 01:28:52,348 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:28:52 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:28:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:28:52 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:28:52 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:28:52 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:28:52 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:28:52 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:28:52 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:28:52 at java.base/java.lang.Thread.run(Thread.java:829)
01:28:52 Caused by: Ice.CommunicatorDestroyedException: null
01:28:52 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:28:52 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:28:52 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:28:52 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:28:52 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:28:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:28:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:28:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:28:52 ... 7 common frames omitted
01:28:55 2024-10-27 01:28:55,665 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
01:28:55 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:28:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:28:55 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:28:55 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:28:55 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:28:55 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:28:55 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:28:55 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:28:55 at java.base/java.lang.Thread.run(Thread.java:829)
01:28:55 Caused by: Ice.CommunicatorDestroyedException: null
01:28:55 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:28:55 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:28:55 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:28:55 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:28:55 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:28:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:28:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:28:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:28:55 ... 7 common frames omitted
01:28:59 2024-10-27 01:28:59,360 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:28:59 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:28:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:28:59 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:28:59 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:28:59 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:28:59 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:28:59 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:28:59 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:28:59 at java.base/java.lang.Thread.run(Thread.java:829)
01:28:59 Caused by: Ice.CommunicatorDestroyedException: null
01:28:59 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:28:59 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:28:59 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:28:59 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:28:59 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:28:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:28:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:28:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:28:59 ... 7 common frames omitted
01:29:02 2024-10-27 01:29:02,696 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
01:29:02 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:29:02 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:29:02 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:29:02 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:29:02 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:29:02 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:29:02 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:29:02 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:29:02 at java.base/java.lang.Thread.run(Thread.java:829)
01:29:02 Caused by: Ice.CommunicatorDestroyedException: null
01:29:02 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:29:02 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:29:02 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:29:02 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:29:02 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:29:02 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:29:02 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:29:02 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:29:02 ... 7 common frames omitted
01:29:04 2024-10-27 01:29:04,854 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:29:04 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:29:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:29:04 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:29:04 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:29:04 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:29:04 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:29:04 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:29:04 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:29:04 at java.base/java.lang.Thread.run(Thread.java:829)
01:29:04 Caused by: Ice.CommunicatorDestroyedException: null
01:29:04 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:29:04 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:29:04 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:29:04 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:29:04 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:29:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:29:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:29:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:29:04 ... 7 common frames omitted
01:29:07 2024-10-27 01:29:07,064 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:29:07 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:29:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:29:07 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:29:07 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:29:07 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:29:07 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:29:07 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:29:07 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:29:07 at java.base/java.lang.Thread.run(Thread.java:829)
01:29:07 Caused by: Ice.CommunicatorDestroyedException: null
01:29:07 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:29:07 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:29:07 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:29:07 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:29:07 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:29:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:29:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:29:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:29:07 ... 7 common frames omitted
01:29:09 2024-10-27 01:29:09,430 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
01:29:09 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:29:09 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:29:09 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:29:09 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:29:09 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:29:09 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:29:09 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:29:09 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:29:09 at java.base/java.lang.Thread.run(Thread.java:829)
01:29:09 Caused by: Ice.CommunicatorDestroyedException: null
01:29:09 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:29:09 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:29:09 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:29:09 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:29:09 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:29:09 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:29:09 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:29:09 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:29:09 ... 7 common frames omitted
01:29:11 2024-10-27 01:29:11,706 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
01:29:11 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:29:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:29:11 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:29:11 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:29:11 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:29:11 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:29:11 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:29:11 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:29:11 at java.base/java.lang.Thread.run(Thread.java:829)
01:29:11 Caused by: Ice.CommunicatorDestroyedException: null
01:29:11 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:29:11 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:29:11 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:29:11 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:29:11 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:29:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:29:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:29:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:29:11 ... 7 common frames omitted
01:29:13 2024-10-27 01:29:13,788 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:29:13 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:29:13 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:29:13 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:29:13 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:29:13 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:29:13 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:29:13 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:29:13 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:29:13 at java.base/java.lang.Thread.run(Thread.java:829)
01:29:13 Caused by: Ice.CommunicatorDestroyedException: null
01:29:13 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:29:13 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:29:13 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:29:13 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:29:13 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:29:13 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:29:13 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:29:13 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:29:13 ... 7 common frames omitted
01:29:15 2024-10-27 01:29:15,997 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
01:29:15 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:29:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:29:15 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:29:15 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:29:15 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:29:15 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:29:15 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:29:15 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:29:15 at java.base/java.lang.Thread.run(Thread.java:829)
01:29:15 Caused by: Ice.CommunicatorDestroyedException: null
01:29:15 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:29:15 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:29:15 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:29:15 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:29:15 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:29:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:29:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:29:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:29:15 ... 7 common frames omitted
01:29:18 2024-10-27 01:29:18,113 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:29:18 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:29:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:29:18 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:29:18 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:29:18 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:29:18 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:29:18 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:29:18 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:29:18 at java.base/java.lang.Thread.run(Thread.java:829)
01:29:18 Caused by: Ice.CommunicatorDestroyedException: null
01:29:18 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:29:18 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:29:18 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:29:18 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:29:18 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:29:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:29:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:29:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:29:18 ... 7 common frames omitted
01:29:20 2024-10-27 01:29:20,296 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
01:29:20 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:29:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:29:20 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:29:20 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:29:20 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:29:20 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:29:20 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:29:20 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:29:20 at java.base/java.lang.Thread.run(Thread.java:829)
01:29:20 Caused by: Ice.CommunicatorDestroyedException: null
01:29:20 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:29:20 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:29:20 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:29:20 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:29:20 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:29:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:29:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:29:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:29:20 ... 7 common frames omitted
01:29:22 2024-10-27 01:29:22,718 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:29:22 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:29:22 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:29:22 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:29:22 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:29:22 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:29:22 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:29:22 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:29:22 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:29:22 at java.base/java.lang.Thread.run(Thread.java:829)
01:29:22 Caused by: Ice.CommunicatorDestroyedException: null
01:29:22 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:29:22 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:29:22 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:29:22 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:29:22 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:29:22 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:29:22 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:29:22 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:29:22 ... 7 common frames omitted
01:29:25 2024-10-27 01:29:25,086 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
01:29:25 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:29:25 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:29:25 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:29:25 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:29:25 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:29:25 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:29:25 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:29:25 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:29:25 at java.base/java.lang.Thread.run(Thread.java:829)
01:29:25 Caused by: Ice.CommunicatorDestroyedException: null
01:29:25 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:29:25 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:29:25 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:29:25 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:29:25 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:29:25 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:29:25 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:29:25 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:29:25 ... 7 common frames omitted
01:29:27 2024-10-27 01:29:27,386 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:29:27 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:29:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:29:27 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:29:27 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:29:27 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:29:27 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:29:27 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:29:27 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:29:27 at java.base/java.lang.Thread.run(Thread.java:829)
01:29:27 Caused by: Ice.CommunicatorDestroyedException: null
01:29:27 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:29:27 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:29:27 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:29:27 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:29:27 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:29:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:29:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:29:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:29:27 ... 7 common frames omitted
01:29:29 2024-10-27 01:29:29,677 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:29:29 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:29:29 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:29:29 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:29:29 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:29:29 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:29:29 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:29:29 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:29:29 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:29:29 at java.base/java.lang.Thread.run(Thread.java:829)
01:29:29 Caused by: Ice.CommunicatorDestroyedException: null
01:29:29 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:29:29 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:29:29 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:29:29 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:29:29 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:29:29 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:29:29 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:29:29 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:29:29 ... 7 common frames omitted
01:29:33 2024-10-27 01:29:33,502 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
01:29:33 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:29:33 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:29:33 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:29:33 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:29:33 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:29:33 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:29:33 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:29:33 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:29:33 at java.base/java.lang.Thread.run(Thread.java:829)
01:29:33 Caused by: Ice.CommunicatorDestroyedException: null
01:29:33 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:29:33 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:29:33 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:29:33 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:29:33 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:29:33 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:29:33 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:29:33 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:29:33 ... 7 common frames omitted
01:29:37 2024-10-27 01:29:37,212 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
01:29:37 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:29:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:29:37 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:29:37 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:29:37 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:29:37 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:29:37 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:29:37 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:29:37 at java.base/java.lang.Thread.run(Thread.java:829)
01:29:37 Caused by: Ice.CommunicatorDestroyedException: null
01:29:37 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:29:37 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:29:37 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:29:37 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:29:37 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:29:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:29:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:29:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:29:37 ... 7 common frames omitted
01:29:40 2024-10-27 01:29:40,716 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:29:40 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:29:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:29:40 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:29:40 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:29:40 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:29:40 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:29:40 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:29:40 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:29:40 at java.base/java.lang.Thread.run(Thread.java:829)
01:29:40 Caused by: Ice.CommunicatorDestroyedException: null
01:29:40 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:29:40 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:29:40 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:29:40 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:29:40 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:29:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:29:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:29:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:29:40 ... 7 common frames omitted
01:29:44 2024-10-27 01:29:44,296 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
01:29:44 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:29:44 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:29:44 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:29:44 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:29:44 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:29:44 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:29:44 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:29:44 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:29:44 at java.base/java.lang.Thread.run(Thread.java:829)
01:29:44 Caused by: Ice.CommunicatorDestroyedException: null
01:29:44 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:29:44 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:29:44 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:29:44 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:29:44 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:29:44 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:29:44 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:29:44 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:29:44 ... 7 common frames omitted
01:29:46 2024-10-27 01:29:46,551 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:29:46 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:29:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:29:46 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:29:46 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:29:46 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:29:46 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:29:46 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:29:46 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:29:46 at java.base/java.lang.Thread.run(Thread.java:829)
01:29:46 Caused by: Ice.CommunicatorDestroyedException: null
01:29:46 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:29:46 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:29:46 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:29:46 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:29:46 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:29:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:29:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:29:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:29:46 ... 7 common frames omitted
01:29:48 2024-10-27 01:29:48,779 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
01:29:48 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:29:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:29:48 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:29:48 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:29:48 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:29:48 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:29:48 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:29:48 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:29:48 at java.base/java.lang.Thread.run(Thread.java:829)
01:29:48 Caused by: Ice.CommunicatorDestroyedException: null
01:29:48 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:29:48 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:29:48 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:29:48 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:29:48 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:29:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:29:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:29:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:29:48 ... 7 common frames omitted
01:29:50 2024-10-27 01:29:50,959 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:29:50 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:29:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:29:50 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:29:50 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:29:50 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:29:50 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:29:50 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:29:50 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:29:50 at java.base/java.lang.Thread.run(Thread.java:829)
01:29:50 Caused by: Ice.CommunicatorDestroyedException: null
01:29:50 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:29:50 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:29:50 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:29:50 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:29:50 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:29:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:29:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:29:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:29:50 ... 7 common frames omitted
01:29:53 2024-10-27 01:29:53,149 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
01:29:53 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:29:53 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:29:53 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:29:53 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:29:53 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:29:53 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:29:53 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:29:53 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:29:53 at java.base/java.lang.Thread.run(Thread.java:829)
01:29:53 Caused by: Ice.CommunicatorDestroyedException: null
01:29:53 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:29:53 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:29:53 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:29:53 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:29:53 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:29:53 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:29:53 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:29:53 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:29:53 ... 7 common frames omitted
01:29:55 2024-10-27 01:29:55,325 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:29:55 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:29:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:29:55 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:29:55 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:29:55 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:29:55 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:29:55 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:29:55 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:29:55 at java.base/java.lang.Thread.run(Thread.java:829)
01:29:55 Caused by: Ice.CommunicatorDestroyedException: null
01:29:55 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:29:55 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:29:55 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:29:55 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:29:55 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:29:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:29:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:29:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:29:55 ... 7 common frames omitted
01:29:57 2024-10-27 01:29:57,582 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:29:57 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:29:57 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:29:57 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:29:57 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:29:57 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:29:57 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:29:57 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:29:57 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:29:57 at java.base/java.lang.Thread.run(Thread.java:829)
01:29:57 Caused by: Ice.CommunicatorDestroyedException: null
01:29:57 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:29:57 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:29:57 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:29:57 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:29:57 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:29:57 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:29:57 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:29:57 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:29:57 ... 7 common frames omitted
01:29:59 2024-10-27 01:29:59,779 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
01:29:59 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:29:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:29:59 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:29:59 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:29:59 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:29:59 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:29:59 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:29:59 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:29:59 at java.base/java.lang.Thread.run(Thread.java:829)
01:29:59 Caused by: Ice.CommunicatorDestroyedException: null
01:29:59 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:29:59 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:29:59 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:29:59 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:29:59 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:29:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:29:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:29:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:29:59 ... 7 common frames omitted
01:30:26 2024-10-27 01:30:26,911 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
01:30:26 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:30:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:30:26 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:30:26 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:30:26 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:30:26 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:30:26 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:30:26 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:30:26 at java.base/java.lang.Thread.run(Thread.java:829)
01:30:26 Caused by: Ice.CommunicatorDestroyedException: null
01:30:26 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:30:26 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:30:26 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:30:26 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:30:26 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:30:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:30:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:30:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:30:26 ... 7 common frames omitted
01:30:30 2024-10-27 01:30:30,429 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:30:30 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:30:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:30:30 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:30:30 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:30:30 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:30:30 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:30:30 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:30:30 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:30:30 at java.base/java.lang.Thread.run(Thread.java:829)
01:30:30 Caused by: Ice.CommunicatorDestroyedException: null
01:30:30 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:30:30 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:30:30 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:30:30 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:30:30 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:30:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:30:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:30:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:30:30 ... 7 common frames omitted
01:30:33 2024-10-27 01:30:33,729 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
01:30:33 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:30:33 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:30:33 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:30:33 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:30:33 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:30:33 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:30:33 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:30:33 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:30:33 at java.base/java.lang.Thread.run(Thread.java:829)
01:30:33 Caused by: Ice.CommunicatorDestroyedException: null
01:30:33 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:30:33 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:30:33 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:30:33 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:30:33 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:30:33 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:30:33 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:30:33 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:30:33 ... 7 common frames omitted
01:30:37 2024-10-27 01:30:37,089 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:30:37 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:30:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:30:37 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:30:37 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:30:37 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:30:37 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:30:37 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:30:37 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:30:37 at java.base/java.lang.Thread.run(Thread.java:829)
01:30:37 Caused by: Ice.CommunicatorDestroyedException: null
01:30:37 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:30:37 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:30:37 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:30:37 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:30:37 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:30:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:30:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:30:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:30:37 ... 7 common frames omitted
01:30:40 2024-10-27 01:30:40,284 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
01:30:40 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:30:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:30:40 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:30:40 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:30:40 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:30:40 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:30:40 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:30:40 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:30:40 at java.base/java.lang.Thread.run(Thread.java:829)
01:30:40 Caused by: Ice.CommunicatorDestroyedException: null
01:30:40 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:30:40 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:30:40 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:30:40 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:30:40 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:30:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:30:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:30:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:30:40 ... 7 common frames omitted
01:30:43 2024-10-27 01:30:43,823 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:30:43 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:30:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:30:43 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:30:43 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:30:43 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:30:43 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:30:43 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:30:43 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:30:43 at java.base/java.lang.Thread.run(Thread.java:829)
01:30:43 Caused by: Ice.CommunicatorDestroyedException: null
01:30:43 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:30:43 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:30:43 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:30:43 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:30:43 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:30:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:30:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:30:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:30:43 ... 7 common frames omitted
01:30:47 2024-10-27 01:30:47,147 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
01:30:47 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:30:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:30:47 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:30:47 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:30:47 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:30:47 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:30:47 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:30:47 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:30:47 at java.base/java.lang.Thread.run(Thread.java:829)
01:30:47 Caused by: Ice.CommunicatorDestroyedException: null
01:30:47 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:30:47 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:30:47 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:30:47 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:30:47 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:30:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:30:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:30:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:30:47 ... 7 common frames omitted
01:30:50 2024-10-27 01:30:50,628 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:30:50 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:30:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:30:50 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:30:50 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:30:50 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:30:50 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:30:50 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:30:50 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:30:50 at java.base/java.lang.Thread.run(Thread.java:829)
01:30:50 Caused by: Ice.CommunicatorDestroyedException: null
01:30:50 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:30:50 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:30:50 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:30:50 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:30:50 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:30:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:30:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:30:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:30:50 ... 7 common frames omitted
01:30:53 2024-10-27 01:30:53,996 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:30:53 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:30:53 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:30:53 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:30:53 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:30:53 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:30:53 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:30:53 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:30:53 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:30:53 at java.base/java.lang.Thread.run(Thread.java:829)
01:30:53 Caused by: Ice.CommunicatorDestroyedException: null
01:30:53 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:30:53 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:30:53 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:30:53 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:30:53 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:30:53 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:30:53 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:30:53 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:30:53 ... 7 common frames omitted
01:30:56 2024-10-27 01:30:56,309 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
01:30:56 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:30:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:30:56 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:30:56 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:30:56 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:30:56 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:30:56 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:30:56 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:30:56 at java.base/java.lang.Thread.run(Thread.java:829)
01:30:56 Caused by: Ice.CommunicatorDestroyedException: null
01:30:56 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:30:56 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:30:56 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:30:56 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:30:56 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:30:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:30:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:30:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:30:56 ... 7 common frames omitted
01:30:58 2024-10-27 01:30:58,363 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
01:30:58 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:30:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:30:58 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:30:58 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:30:58 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:30:58 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:30:58 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:30:58 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:30:58 at java.base/java.lang.Thread.run(Thread.java:829)
01:30:58 Caused by: Ice.CommunicatorDestroyedException: null
01:30:58 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:30:58 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:30:58 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:30:58 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:30:58 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:30:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:30:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:30:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:30:58 ... 7 common frames omitted
01:31:00 2024-10-27 01:31:00,304 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:31:00 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:31:00 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:31:00 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:31:00 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:31:00 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:31:00 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:31:00 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:31:00 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:31:00 at java.base/java.lang.Thread.run(Thread.java:829)
01:31:00 Caused by: Ice.CommunicatorDestroyedException: null
01:31:00 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:31:00 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:31:00 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:31:00 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:31:00 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:31:00 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:31:00 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:31:00 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:31:00 ... 7 common frames omitted
01:31:03 2024-10-27 01:31:03,448 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
01:31:03 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:31:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:31:03 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:31:03 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:31:03 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:31:03 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:31:03 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:31:03 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:31:03 at java.base/java.lang.Thread.run(Thread.java:829)
01:31:03 Caused by: Ice.CommunicatorDestroyedException: null
01:31:03 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:31:03 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:31:03 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:31:03 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:31:03 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:31:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:31:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:31:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:31:03 ... 7 common frames omitted
01:31:05 2024-10-27 01:31:05,849 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:31:05 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:31:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:31:05 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:31:05 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:31:05 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:31:05 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:31:05 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:31:05 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:31:05 at java.base/java.lang.Thread.run(Thread.java:829)
01:31:05 Caused by: Ice.CommunicatorDestroyedException: null
01:31:05 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:31:05 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:31:05 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:31:05 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:31:05 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:31:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:31:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:31:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:31:05 ... 7 common frames omitted
01:31:08 2024-10-27 01:31:08,400 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
01:31:08 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:31:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:31:08 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:31:08 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:31:08 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:31:08 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:31:08 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:31:08 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:31:08 at java.base/java.lang.Thread.run(Thread.java:829)
01:31:08 Caused by: Ice.CommunicatorDestroyedException: null
01:31:08 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:31:08 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:31:08 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:31:08 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:31:08 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:31:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:31:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:31:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:31:08 ... 7 common frames omitted
01:31:10 2024-10-27 01:31:10,891 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:31:10 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:31:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:31:10 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:31:10 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:31:10 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:31:10 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:31:10 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:31:10 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:31:10 at java.base/java.lang.Thread.run(Thread.java:829)
01:31:10 Caused by: Ice.CommunicatorDestroyedException: null
01:31:10 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:31:10 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:31:10 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:31:10 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:31:10 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:31:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:31:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:31:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:31:10 ... 7 common frames omitted
01:31:13 2024-10-27 01:31:13,445 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
01:31:13 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:31:13 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:31:13 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:31:13 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:31:13 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:31:13 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:31:13 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:31:13 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:31:13 at java.base/java.lang.Thread.run(Thread.java:829)
01:31:13 Caused by: Ice.CommunicatorDestroyedException: null
01:31:13 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:31:13 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:31:13 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:31:13 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:31:13 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:31:13 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:31:13 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:31:13 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:31:13 ... 7 common frames omitted
01:31:17 2024-10-27 01:31:17,339 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:31:17 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:31:17 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:31:17 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:31:17 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:31:17 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:31:17 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:31:17 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:31:17 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:31:17 at java.base/java.lang.Thread.run(Thread.java:829)
01:31:17 Caused by: Ice.CommunicatorDestroyedException: null
01:31:17 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:31:17 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:31:17 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:31:17 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:31:17 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:31:17 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:31:17 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:31:17 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:31:17 ... 7 common frames omitted
01:31:21 2024-10-27 01:31:21,239 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:31:21 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:31:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:31:21 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:31:21 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:31:21 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:31:21 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:31:21 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:31:21 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:31:21 at java.base/java.lang.Thread.run(Thread.java:829)
01:31:21 Caused by: Ice.CommunicatorDestroyedException: null
01:31:21 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:31:21 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:31:21 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:31:21 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:31:21 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:31:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:31:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:31:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:31:21 ... 7 common frames omitted
01:31:25 2024-10-27 01:31:25,112 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
01:31:25 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:31:25 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:31:25 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:31:25 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:31:25 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:31:25 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:31:25 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:31:25 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:31:25 at java.base/java.lang.Thread.run(Thread.java:829)
01:31:25 Caused by: Ice.CommunicatorDestroyedException: null
01:31:25 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:31:25 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:31:25 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:31:25 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:31:25 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:31:25 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:31:25 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:31:25 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:31:25 ... 7 common frames omitted
01:31:28 2024-10-27 01:31:28,868 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
01:31:28 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:31:28 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:31:28 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:31:28 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:31:28 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:31:28 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:31:28 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:31:28 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:31:28 at java.base/java.lang.Thread.run(Thread.java:829)
01:31:28 Caused by: Ice.CommunicatorDestroyedException: null
01:31:28 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:31:28 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:31:28 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:31:28 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:31:28 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:31:28 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:31:28 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:31:28 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:31:28 ... 7 common frames omitted
01:31:32 2024-10-27 01:31:32,715 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:31:32 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:31:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:31:32 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:31:32 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:31:32 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:31:32 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:31:32 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:31:32 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:31:32 at java.base/java.lang.Thread.run(Thread.java:829)
01:31:32 Caused by: Ice.CommunicatorDestroyedException: null
01:31:32 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:31:32 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:31:32 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:31:32 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:31:32 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:31:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:31:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:31:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:31:32 ... 7 common frames omitted
01:31:36 2024-10-27 01:31:36,654 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
01:31:36 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:31:36 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:31:36 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:31:36 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:31:36 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:31:36 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:31:36 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:31:36 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:31:36 at java.base/java.lang.Thread.run(Thread.java:829)
01:31:36 Caused by: Ice.CommunicatorDestroyedException: null
01:31:36 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:31:36 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:31:36 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:31:36 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:31:36 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:31:36 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:31:36 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:31:36 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:31:36 ... 7 common frames omitted
01:31:40 2024-10-27 01:31:40,720 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:31:40 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:31:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:31:40 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:31:40 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:31:40 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:31:40 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:31:40 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:31:40 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:31:40 at java.base/java.lang.Thread.run(Thread.java:829)
01:31:40 Caused by: Ice.CommunicatorDestroyedException: null
01:31:40 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:31:40 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:31:40 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:31:40 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:31:40 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:31:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:31:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:31:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:31:40 ... 7 common frames omitted
01:33:01 2024-10-27 01:33:01,790 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
01:33:01 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:33:01 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:33:01 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:33:01 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:33:01 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:33:01 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:33:01 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:33:01 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:33:01 at java.base/java.lang.Thread.run(Thread.java:829)
01:33:01 Caused by: Ice.CommunicatorDestroyedException: null
01:33:01 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:33:01 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:33:01 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:33:01 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:33:01 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:33:01 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:33:01 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:33:01 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:33:01 ... 7 common frames omitted
01:33:04 2024-10-27 01:33:04,865 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:33:04 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:33:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:33:04 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:33:04 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:33:04 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:33:04 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:33:04 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:33:04 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:33:04 at java.base/java.lang.Thread.run(Thread.java:829)
01:33:04 Caused by: Ice.CommunicatorDestroyedException: null
01:33:04 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:33:04 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:33:04 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:33:04 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:33:04 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:33:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:33:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:33:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:33:04 ... 7 common frames omitted
01:33:08 2024-10-27 01:33:08,014 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
01:33:08 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:33:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:33:08 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:33:08 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:33:08 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:33:08 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:33:08 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:33:08 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:33:08 at java.base/java.lang.Thread.run(Thread.java:829)
01:33:08 Caused by: Ice.CommunicatorDestroyedException: null
01:33:08 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:33:08 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:33:08 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:33:08 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:33:08 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:33:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:33:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:33:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:33:08 ... 7 common frames omitted
01:33:10 2024-10-27 01:33:10,950 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:33:10 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:33:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:33:10 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:33:10 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:33:10 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:33:10 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:33:10 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:33:10 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:33:10 at java.base/java.lang.Thread.run(Thread.java:829)
01:33:10 Caused by: Ice.CommunicatorDestroyedException: null
01:33:10 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:33:10 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:33:10 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:33:10 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:33:10 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:33:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:33:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:33:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:33:10 ... 7 common frames omitted
01:33:13 2024-10-27 01:33:13,824 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:33:13 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:33:13 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:33:13 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:33:13 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:33:13 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:33:13 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:33:13 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:33:13 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:33:13 at java.base/java.lang.Thread.run(Thread.java:829)
01:33:13 Caused by: Ice.CommunicatorDestroyedException: null
01:33:13 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:33:13 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:33:13 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:33:13 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:33:13 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:33:13 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:33:13 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:33:13 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:33:13 ... 7 common frames omitted
01:33:18 2024-10-27 01:33:18,050 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
01:33:18 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:33:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:33:18 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:33:18 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:33:18 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:33:18 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:33:18 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:33:18 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:33:18 at java.base/java.lang.Thread.run(Thread.java:829)
01:33:18 Caused by: Ice.CommunicatorDestroyedException: null
01:33:18 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:33:18 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:33:18 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:33:18 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:33:18 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:33:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:33:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:33:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:33:18 ... 7 common frames omitted
01:33:22 2024-10-27 01:33:22,550 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
01:33:22 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:33:22 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:33:22 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:33:22 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:33:22 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:33:22 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:33:22 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:33:22 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:33:22 at java.base/java.lang.Thread.run(Thread.java:829)
01:33:22 Caused by: Ice.CommunicatorDestroyedException: null
01:33:22 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:33:22 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:33:22 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:33:22 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:33:22 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:33:22 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:33:22 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:33:22 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:33:22 ... 7 common frames omitted
01:33:27 2024-10-27 01:33:27,079 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:33:27 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:33:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:33:27 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:33:27 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:33:27 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:33:27 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:33:27 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:33:27 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:33:27 at java.base/java.lang.Thread.run(Thread.java:829)
01:33:27 Caused by: Ice.CommunicatorDestroyedException: null
01:33:27 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:33:27 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:33:27 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:33:27 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:33:27 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:33:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:33:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:33:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:33:27 ... 7 common frames omitted
01:33:31 2024-10-27 01:33:31,834 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
01:33:31 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:33:31 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:33:31 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:33:31 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:33:31 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:33:31 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:33:31 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:33:31 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:33:31 at java.base/java.lang.Thread.run(Thread.java:829)
01:33:31 Caused by: Ice.CommunicatorDestroyedException: null
01:33:31 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:33:31 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:33:31 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:33:31 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:33:31 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:33:31 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:33:31 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:33:31 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:33:31 ... 7 common frames omitted
01:33:36 2024-10-27 01:33:36,046 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:33:36 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:33:36 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:33:36 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:33:36 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:33:36 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:33:36 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:33:36 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:33:36 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:33:36 at java.base/java.lang.Thread.run(Thread.java:829)
01:33:36 Caused by: Ice.CommunicatorDestroyedException: null
01:33:36 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:33:36 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:33:36 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:33:36 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:33:36 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:33:36 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:33:36 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:33:36 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:33:36 ... 7 common frames omitted
01:33:40 2024-10-27 01:33:40,312 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
01:33:40 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:33:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:33:40 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:33:40 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:33:40 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:33:40 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:33:40 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:33:40 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:33:40 at java.base/java.lang.Thread.run(Thread.java:829)
01:33:40 Caused by: Ice.CommunicatorDestroyedException: null
01:33:40 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:33:40 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:33:40 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:33:40 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:33:40 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:33:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:33:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:33:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:33:40 ... 7 common frames omitted
01:33:44 2024-10-27 01:33:44,406 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:33:44 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:33:44 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:33:44 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:33:44 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:33:44 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:33:44 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:33:44 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:33:44 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:33:44 at java.base/java.lang.Thread.run(Thread.java:829)
01:33:44 Caused by: Ice.CommunicatorDestroyedException: null
01:33:44 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:33:44 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:33:44 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:33:44 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:33:44 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:33:44 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:33:44 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:33:44 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:33:44 ... 7 common frames omitted
01:33:48 2024-10-27 01:33:48,649 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
01:33:48 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:33:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:33:48 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:33:48 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:33:48 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:33:48 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:33:48 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:33:48 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:33:48 at java.base/java.lang.Thread.run(Thread.java:829)
01:33:48 Caused by: Ice.CommunicatorDestroyedException: null
01:33:48 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:33:48 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:33:48 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:33:48 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:33:48 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:33:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:33:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:33:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:33:48 ... 7 common frames omitted
01:33:54 2024-10-27 01:33:54,598 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:33:54 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:33:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:33:54 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:33:54 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:33:54 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:33:54 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:33:54 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:33:54 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:33:54 at java.base/java.lang.Thread.run(Thread.java:829)
01:33:54 Caused by: Ice.CommunicatorDestroyedException: null
01:33:54 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:33:54 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:33:54 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:33:54 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:33:54 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:33:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:33:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:33:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:33:54 ... 7 common frames omitted
01:34:00 2024-10-27 01:34:00,063 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:34:00 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:00 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:00 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:00 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:00 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:00 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:00 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:00 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:00 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:00 Caused by: Ice.CommunicatorDestroyedException: null
01:34:00 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:00 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:00 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:00 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:00 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:00 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:00 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:00 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:00 ... 7 common frames omitted
01:34:05 2024-10-27 01:34:05,554 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
01:34:05 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:05 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:05 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:05 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:05 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:05 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:05 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:05 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:05 Caused by: Ice.CommunicatorDestroyedException: null
01:34:05 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:05 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:05 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:05 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:05 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:05 ... 7 common frames omitted
01:34:10 2024-10-27 01:34:10,753 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
01:34:10 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:10 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:10 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:10 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:10 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:10 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:10 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:10 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:10 Caused by: Ice.CommunicatorDestroyedException: null
01:34:10 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:10 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:10 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:10 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:10 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:10 ... 7 common frames omitted
01:34:11 2024-10-27 01:34:11,961 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:34:11 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:11 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:11 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:11 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:11 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:11 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:11 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:11 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:11 Caused by: Ice.CommunicatorDestroyedException: null
01:34:11 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:11 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:11 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:11 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:11 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:11 ... 7 common frames omitted
01:34:13 2024-10-27 01:34:13,126 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
01:34:13 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:13 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:13 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:13 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:13 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:13 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:13 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:13 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:13 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:13 Caused by: Ice.CommunicatorDestroyedException: null
01:34:13 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:13 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:13 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:13 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:13 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:13 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:13 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:13 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:13 ... 7 common frames omitted
01:34:14 2024-10-27 01:34:14,429 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:34:14 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:14 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:14 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:14 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:14 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:14 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:14 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:14 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:14 Caused by: Ice.CommunicatorDestroyedException: null
01:34:14 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:14 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:14 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:14 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:14 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:14 ... 7 common frames omitted
01:34:15 2024-10-27 01:34:15,617 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
01:34:15 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:15 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:15 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:15 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:15 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:15 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:15 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:15 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:15 Caused by: Ice.CommunicatorDestroyedException: null
01:34:15 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:15 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:15 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:15 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:15 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:15 ... 7 common frames omitted
01:34:16 2024-10-27 01:34:16,843 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:34:16 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:16 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:16 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:16 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:16 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:16 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:16 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:16 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:16 Caused by: Ice.CommunicatorDestroyedException: null
01:34:16 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:16 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:16 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:16 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:16 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:16 ... 7 common frames omitted
01:34:18 2024-10-27 01:34:18,093 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
01:34:18 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:18 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:18 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:18 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:18 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:18 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:18 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:18 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:18 Caused by: Ice.CommunicatorDestroyedException: null
01:34:18 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:18 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:18 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:18 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:18 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:18 ... 7 common frames omitted
01:34:19 2024-10-27 01:34:19,342 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:34:19 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:19 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:19 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:19 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:19 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:19 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:19 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:19 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:19 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:19 Caused by: Ice.CommunicatorDestroyedException: null
01:34:19 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:19 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:19 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:19 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:19 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:19 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:19 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:19 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:19 ... 7 common frames omitted
01:34:20 2024-10-27 01:34:20,695 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:34:20 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:20 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:20 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:20 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:20 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:20 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:20 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:20 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:20 Caused by: Ice.CommunicatorDestroyedException: null
01:34:20 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:20 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:20 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:20 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:20 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:20 ... 7 common frames omitted
01:34:21 2024-10-27 01:34:21,894 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
01:34:21 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:21 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:21 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:21 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:21 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:21 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:21 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:21 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:21 Caused by: Ice.CommunicatorDestroyedException: null
01:34:21 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:21 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:21 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:21 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:21 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:21 ... 7 common frames omitted
01:34:23 2024-10-27 01:34:23,108 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
01:34:23 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:23 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:23 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:23 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:23 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:23 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:23 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:23 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:23 Caused by: Ice.CommunicatorDestroyedException: null
01:34:23 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:23 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:23 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:23 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:23 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:23 ... 7 common frames omitted
01:34:24 2024-10-27 01:34:24,412 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:34:24 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:24 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:24 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:24 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:24 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:24 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:24 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:24 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:24 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:24 Caused by: Ice.CommunicatorDestroyedException: null
01:34:24 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:24 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:24 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:24 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:24 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:24 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:24 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:24 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:24 ... 7 common frames omitted
01:34:25 2024-10-27 01:34:25,598 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
01:34:25 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:25 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:25 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:25 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:25 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:25 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:25 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:25 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:25 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:25 Caused by: Ice.CommunicatorDestroyedException: null
01:34:25 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:25 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:25 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:25 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:25 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:25 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:25 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:25 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:25 ... 7 common frames omitted
01:34:26 2024-10-27 01:34:26,759 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:34:26 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:26 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:26 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:26 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:26 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:26 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:26 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:26 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:26 Caused by: Ice.CommunicatorDestroyedException: null
01:34:26 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:26 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:26 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:26 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:26 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:26 ... 7 common frames omitted
01:34:28 2024-10-27 01:34:28,053 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
01:34:28 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:28 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:28 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:28 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:28 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:28 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:28 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:28 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:28 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:28 Caused by: Ice.CommunicatorDestroyedException: null
01:34:28 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:28 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:28 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:28 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:28 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:28 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:28 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:28 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:28 ... 7 common frames omitted
01:34:29 2024-10-27 01:34:29,283 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:34:29 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:29 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:29 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:29 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:29 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:29 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:29 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:29 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:29 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:29 Caused by: Ice.CommunicatorDestroyedException: null
01:34:29 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:29 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:29 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:29 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:29 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:29 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:29 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:29 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:29 ... 7 common frames omitted
01:34:30 2024-10-27 01:34:30,526 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
01:34:30 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:30 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:30 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:30 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:30 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:30 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:30 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:30 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:30 Caused by: Ice.CommunicatorDestroyedException: null
01:34:30 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:30 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:30 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:30 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:30 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:30 ... 7 common frames omitted
01:34:31 2024-10-27 01:34:31,731 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:34:31 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:31 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:31 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:31 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:31 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:31 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:31 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:31 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:31 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:31 Caused by: Ice.CommunicatorDestroyedException: null
01:34:31 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:31 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:31 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:31 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:31 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:31 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:31 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:31 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:31 ... 7 common frames omitted
01:34:32 2024-10-27 01:34:32,955 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:34:32 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:32 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:32 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:32 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:32 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:32 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:32 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:32 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:32 Caused by: Ice.CommunicatorDestroyedException: null
01:34:32 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:32 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:32 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:32 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:32 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:32 ... 7 common frames omitted
01:34:34 2024-10-27 01:34:34,187 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
01:34:34 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:34 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:34 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:34 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:34 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:34 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:34 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:34 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:34 Caused by: Ice.CommunicatorDestroyedException: null
01:34:34 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:34 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:34 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:34 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:34 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:34 ... 7 common frames omitted
01:34:35 2024-10-27 01:34:35,461 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
01:34:35 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:35 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:35 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:35 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:35 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:35 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:35 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:35 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:35 Caused by: Ice.CommunicatorDestroyedException: null
01:34:35 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:35 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:35 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:35 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:35 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:35 ... 7 common frames omitted
01:34:36 2024-10-27 01:34:36,650 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:34:36 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:36 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:36 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:36 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:36 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:36 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:36 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:36 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:36 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:36 Caused by: Ice.CommunicatorDestroyedException: null
01:34:36 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:36 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:36 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:36 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:36 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:36 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:36 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:36 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:36 ... 7 common frames omitted
01:34:37 2024-10-27 01:34:37,928 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
01:34:37 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:37 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:37 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:37 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:37 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:37 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:37 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:37 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:37 Caused by: Ice.CommunicatorDestroyedException: null
01:34:37 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:37 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:37 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:37 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:37 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:37 ... 7 common frames omitted
01:34:39 2024-10-27 01:34:39,166 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:34:39 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:39 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:39 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:39 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:39 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:39 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:39 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:39 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:39 Caused by: Ice.CommunicatorDestroyedException: null
01:34:39 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:39 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:39 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:39 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:39 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:39 ... 7 common frames omitted
01:34:40 2024-10-27 01:34:40,389 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
01:34:40 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:40 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:40 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:40 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:40 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:40 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:40 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:40 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:40 Caused by: Ice.CommunicatorDestroyedException: null
01:34:40 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:40 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:40 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:40 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:40 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:40 ... 7 common frames omitted
01:34:41 2024-10-27 01:34:41,611 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:34:41 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:41 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:41 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:41 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:41 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:41 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:41 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:41 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:41 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:41 Caused by: Ice.CommunicatorDestroyedException: null
01:34:41 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:41 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:41 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:41 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:41 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:41 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:41 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:41 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:41 ... 7 common frames omitted
01:34:42 2024-10-27 01:34:42,812 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
01:34:42 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:42 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:42 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:42 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:42 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:42 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:42 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:42 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:42 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:42 Caused by: Ice.CommunicatorDestroyedException: null
01:34:42 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:42 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:42 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:42 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:42 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:42 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:42 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:42 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:42 ... 7 common frames omitted
01:34:44 2024-10-27 01:34:44,023 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:34:44 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:44 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:44 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:44 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:44 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:44 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:44 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:44 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:44 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:44 Caused by: Ice.CommunicatorDestroyedException: null
01:34:44 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:44 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:44 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:44 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:44 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:44 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:44 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:44 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:44 ... 7 common frames omitted
01:34:45 2024-10-27 01:34:45,225 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:34:45 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:45 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:45 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:45 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:45 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:45 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:45 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:45 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:45 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:45 Caused by: Ice.CommunicatorDestroyedException: null
01:34:45 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:45 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:45 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:45 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:45 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:45 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:45 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:45 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:45 ... 7 common frames omitted
01:34:46 2024-10-27 01:34:46,387 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
01:34:46 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:46 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:46 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:46 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:46 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:46 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:46 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:46 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:46 Caused by: Ice.CommunicatorDestroyedException: null
01:34:46 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:46 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:46 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:46 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:46 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:46 ... 7 common frames omitted
01:34:47 2024-10-27 01:34:47,529 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
01:34:47 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:47 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:47 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:47 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:47 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:47 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:47 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:47 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:47 Caused by: Ice.CommunicatorDestroyedException: null
01:34:47 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:47 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:47 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:47 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:47 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:47 ... 7 common frames omitted
01:34:48 2024-10-27 01:34:48,813 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:34:48 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:48 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:48 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:48 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:48 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:48 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:48 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:48 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:48 Caused by: Ice.CommunicatorDestroyedException: null
01:34:48 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:48 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:48 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:48 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:48 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:48 ... 7 common frames omitted
01:34:50 2024-10-27 01:34:50,004 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
01:34:50 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:50 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:50 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:50 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:50 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:50 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:50 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:50 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:50 Caused by: Ice.CommunicatorDestroyedException: null
01:34:50 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:50 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:50 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:50 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:50 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:50 ... 7 common frames omitted
01:34:52 2024-10-27 01:34:52,503 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:34:52 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:52 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:52 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:52 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:52 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:52 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:52 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:52 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:52 Caused by: Ice.CommunicatorDestroyedException: null
01:34:52 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:52 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:52 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:52 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:52 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:52 ... 7 common frames omitted
01:34:54 2024-10-27 01:34:54,924 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
01:34:54 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:54 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:54 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:54 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:54 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:54 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:54 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:54 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:54 Caused by: Ice.CommunicatorDestroyedException: null
01:34:54 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:54 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:54 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:54 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:54 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:54 ... 7 common frames omitted
01:34:57 2024-10-27 01:34:57,500 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:34:57 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:57 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:57 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:57 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:57 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:57 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:57 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:57 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:57 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:57 Caused by: Ice.CommunicatorDestroyedException: null
01:34:57 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:57 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:57 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:57 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:57 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:57 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:57 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:57 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:57 ... 7 common frames omitted
01:34:59 2024-10-27 01:34:59,996 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
01:34:59 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:34:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:34:59 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:34:59 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:34:59 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:34:59 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:34:59 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:34:59 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:34:59 at java.base/java.lang.Thread.run(Thread.java:829)
01:34:59 Caused by: Ice.CommunicatorDestroyedException: null
01:34:59 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:34:59 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:34:59 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:34:59 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:34:59 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:34:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:34:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:34:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:34:59 ... 7 common frames omitted
01:35:04 2024-10-27 01:35:04,617 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:35:04 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:35:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:35:04 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:35:04 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:35:04 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:35:04 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:35:04 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:35:04 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:35:04 at java.base/java.lang.Thread.run(Thread.java:829)
01:35:04 Caused by: Ice.CommunicatorDestroyedException: null
01:35:04 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:35:04 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:35:04 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:35:04 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:35:04 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:35:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:35:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:35:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:35:04 ... 7 common frames omitted
01:35:08 2024-10-27 01:35:08,505 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:35:08 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:35:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:35:08 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:35:08 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:35:08 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:35:08 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:35:08 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:35:08 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:35:08 at java.base/java.lang.Thread.run(Thread.java:829)
01:35:08 Caused by: Ice.CommunicatorDestroyedException: null
01:35:08 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:35:08 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:35:08 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:35:08 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:35:08 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:35:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:35:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:35:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:35:08 ... 7 common frames omitted
01:35:12 2024-10-27 01:35:12,401 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
01:35:12 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:35:12 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:35:12 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:35:12 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:35:12 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:35:12 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:35:12 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:35:12 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:35:12 at java.base/java.lang.Thread.run(Thread.java:829)
01:35:12 Caused by: Ice.CommunicatorDestroyedException: null
01:35:12 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:35:12 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:35:12 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:35:12 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:35:12 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:35:12 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:35:12 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:35:12 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:35:12 ... 7 common frames omitted
01:35:26 2024-10-27 01:35:26,185 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
01:35:26 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:35:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:35:26 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:35:26 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:35:26 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:35:26 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:35:26 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:35:26 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:35:26 at java.base/java.lang.Thread.run(Thread.java:829)
01:35:26 Caused by: Ice.CommunicatorDestroyedException: null
01:35:26 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:35:26 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:35:26 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:35:26 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:35:26 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:35:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:35:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:35:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:35:26 ... 7 common frames omitted
01:35:28 2024-10-27 01:35:28,541 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:35:28 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:35:28 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:35:28 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:35:28 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:35:28 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:35:28 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:35:28 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:35:28 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:35:28 at java.base/java.lang.Thread.run(Thread.java:829)
01:35:28 Caused by: Ice.CommunicatorDestroyedException: null
01:35:28 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:35:28 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:35:28 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:35:28 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:35:28 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:35:28 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:35:28 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:35:28 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:35:28 ... 7 common frames omitted
01:35:30 2024-10-27 01:35:30,944 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
01:35:30 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:35:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:35:30 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:35:30 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:35:30 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:35:30 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:35:30 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:35:30 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:35:30 at java.base/java.lang.Thread.run(Thread.java:829)
01:35:30 Caused by: Ice.CommunicatorDestroyedException: null
01:35:30 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:35:30 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:35:30 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:35:30 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:35:30 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:35:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:35:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:35:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:35:30 ... 7 common frames omitted
01:35:33 2024-10-27 01:35:33,378 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:35:33 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:35:33 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:35:33 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:35:33 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:35:33 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:35:33 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:35:33 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:35:33 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:35:33 at java.base/java.lang.Thread.run(Thread.java:829)
01:35:33 Caused by: Ice.CommunicatorDestroyedException: null
01:35:33 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:35:33 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:35:33 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:35:33 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:35:33 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:35:33 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:35:33 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:35:33 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:35:33 ... 7 common frames omitted
01:39:41 2024-10-27 01:39:41,502 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
01:39:41 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:39:41 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:39:41 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:39:41 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:39:41 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:39:41 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:39:41 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:39:41 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:39:41 at java.base/java.lang.Thread.run(Thread.java:829)
01:39:41 Caused by: Ice.CommunicatorDestroyedException: null
01:39:41 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:39:41 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:39:41 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:39:41 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:39:41 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:39:41 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:39:41 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:39:41 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:39:41 ... 7 common frames omitted
01:39:42 2024-10-27 01:39:42,955 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:39:42 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:39:42 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:39:42 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:39:42 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:39:42 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:39:42 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:39:42 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:39:42 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:39:42 at java.base/java.lang.Thread.run(Thread.java:829)
01:39:42 Caused by: Ice.CommunicatorDestroyedException: null
01:39:42 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:39:42 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:39:42 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:39:42 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:39:42 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:39:42 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:39:42 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:39:42 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:39:42 ... 7 common frames omitted
01:39:43 2024-10-27 01:39:43,580 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
01:39:43 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:39:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:39:43 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:39:43 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:39:43 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:39:43 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:39:43 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:39:43 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:39:43 at java.base/java.lang.Thread.run(Thread.java:829)
01:39:43 Caused by: Ice.CommunicatorDestroyedException: null
01:39:43 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:39:43 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:39:43 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:39:43 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:39:43 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:39:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:39:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:39:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:39:43 ... 7 common frames omitted
01:39:44 2024-10-27 01:39:44,577 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:39:44 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:39:44 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:39:44 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:39:44 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:39:44 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:39:44 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:39:44 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:39:44 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:39:44 at java.base/java.lang.Thread.run(Thread.java:829)
01:39:44 Caused by: Ice.CommunicatorDestroyedException: null
01:39:44 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:39:44 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:39:44 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:39:44 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:39:44 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:39:44 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:39:44 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:39:44 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:39:44 ... 7 common frames omitted
01:39:45 2024-10-27 01:39:45,156 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:39:45 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:39:45 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:39:45 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:39:45 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:39:45 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:39:45 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:39:45 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:39:45 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:39:45 at java.base/java.lang.Thread.run(Thread.java:829)
01:39:45 Caused by: Ice.CommunicatorDestroyedException: null
01:39:45 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:39:45 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:39:45 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:39:45 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:39:45 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:39:45 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:39:45 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:39:45 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:39:45 ... 7 common frames omitted
01:39:46 2024-10-27 01:39:46,361 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
01:39:46 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:39:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:39:46 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:39:46 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:39:46 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:39:46 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:39:46 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:39:46 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:39:46 at java.base/java.lang.Thread.run(Thread.java:829)
01:39:46 Caused by: Ice.CommunicatorDestroyedException: null
01:39:46 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:39:46 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:39:46 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:39:46 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:39:46 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:39:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:39:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:39:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:39:46 ... 7 common frames omitted
01:39:47 2024-10-27 01:39:47,025 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
01:39:47 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:39:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:39:47 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:39:47 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:39:47 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:39:47 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:39:47 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:39:47 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:39:47 at java.base/java.lang.Thread.run(Thread.java:829)
01:39:47 Caused by: Ice.CommunicatorDestroyedException: null
01:39:47 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:39:47 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:39:47 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:39:47 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:39:47 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:39:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:39:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:39:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:39:47 ... 7 common frames omitted
01:39:48 2024-10-27 01:39:48,146 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:39:48 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:39:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:39:48 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:39:48 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:39:48 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:39:48 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:39:48 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:39:48 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:39:48 at java.base/java.lang.Thread.run(Thread.java:829)
01:39:48 Caused by: Ice.CommunicatorDestroyedException: null
01:39:48 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:39:48 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:39:48 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:39:48 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:39:48 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:39:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:39:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:39:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:39:48 ... 7 common frames omitted
01:39:48 2024-10-27 01:39:48,739 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
01:39:48 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:39:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:39:48 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:39:48 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:39:48 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:39:48 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:39:48 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:39:48 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:39:48 at java.base/java.lang.Thread.run(Thread.java:829)
01:39:48 Caused by: Ice.CommunicatorDestroyedException: null
01:39:48 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:39:48 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:39:48 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:39:48 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:39:48 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:39:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:39:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:39:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:39:48 ... 7 common frames omitted
01:39:49 2024-10-27 01:39:49,314 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:39:49 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:39:49 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:39:49 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:39:49 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:39:49 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:39:49 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:39:49 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:39:49 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:39:49 at java.base/java.lang.Thread.run(Thread.java:829)
01:39:49 Caused by: Ice.CommunicatorDestroyedException: null
01:39:49 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:39:49 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:39:49 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:39:49 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:39:49 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:39:49 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:39:49 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:39:49 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:39:49 ... 7 common frames omitted
01:39:49 2024-10-27 01:39:49,819 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
01:39:49 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:39:49 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:39:49 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:39:49 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:39:49 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:39:49 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:39:49 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:39:49 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:39:49 at java.base/java.lang.Thread.run(Thread.java:829)
01:39:49 Caused by: Ice.CommunicatorDestroyedException: null
01:39:49 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:39:49 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:39:49 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:39:49 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:39:49 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:39:49 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:39:49 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:39:49 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:39:49 ... 7 common frames omitted
01:39:52 2024-10-27 01:39:52,193 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:39:52 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:39:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:39:52 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:39:52 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:39:52 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:39:52 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:39:52 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:39:52 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:39:52 at java.base/java.lang.Thread.run(Thread.java:829)
01:39:52 Caused by: Ice.CommunicatorDestroyedException: null
01:39:52 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:39:52 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:39:52 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:39:52 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:39:52 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:39:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:39:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:39:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:39:52 ... 7 common frames omitted
01:41:29 2024-10-27 01:41:29,875 ERROR [ ome.system.UpgradeCheck] (Response-1) Error reading from url: http://upgrade.openmicroscopy.org.uk?version=test;os.name=Linux;os.arch=amd64;os.version=5.14.0-427.40.1.el9_4.x86_64;java.runtime.version=11.0.24%2B8-LTS;java.vm.vendor=Red+Hat%2C+Inc. "connect timed out"
01:42:38 2024-10-27 01:42:38,035 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
01:42:38 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:42:38 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:42:38 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:42:38 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:42:38 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:42:38 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:42:38 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:42:38 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:42:38 at java.base/java.lang.Thread.run(Thread.java:829)
01:42:38 Caused by: Ice.CommunicatorDestroyedException: null
01:42:38 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:42:38 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:42:38 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:42:38 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:42:38 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:42:38 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:42:38 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:42:38 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:42:38 ... 7 common frames omitted
01:42:43 2024-10-27 01:42:43,318 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:42:43 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:42:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:42:43 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:42:43 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:42:43 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:42:43 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:42:43 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:42:43 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:42:43 at java.base/java.lang.Thread.run(Thread.java:829)
01:42:43 Caused by: Ice.CommunicatorDestroyedException: null
01:42:43 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:42:43 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:42:43 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:42:43 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:42:43 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:42:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:42:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:42:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:42:43 ... 7 common frames omitted
01:42:53 2024-10-27 01:42:53,311 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
01:42:53 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:42:53 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:42:53 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:42:53 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:42:53 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:42:53 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:42:53 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:42:53 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:42:53 at java.base/java.lang.Thread.run(Thread.java:829)
01:42:53 Caused by: Ice.CommunicatorDestroyedException: null
01:42:53 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:42:53 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:42:53 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:42:53 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:42:53 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:42:53 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:42:53 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:42:53 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:42:53 ... 7 common frames omitted
01:43:16 2024-10-27 01:43:16,150 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:43:16 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:43:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:43:16 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:43:16 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:43:16 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:43:16 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:43:16 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:43:16 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:43:16 at java.base/java.lang.Thread.run(Thread.java:829)
01:43:16 Caused by: Ice.CommunicatorDestroyedException: null
01:43:16 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:43:16 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:43:16 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:43:16 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:43:16 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:43:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:43:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:43:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:43:16 ... 7 common frames omitted
01:43:18 2024-10-27 01:43:18,489 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:43:18 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:43:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:43:18 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:43:18 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:43:18 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:43:18 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:43:18 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:43:18 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:43:18 at java.base/java.lang.Thread.run(Thread.java:829)
01:43:18 Caused by: Ice.CommunicatorDestroyedException: null
01:43:18 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:43:18 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:43:18 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:43:18 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:43:18 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:43:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:43:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:43:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:43:18 ... 7 common frames omitted
01:43:21 2024-10-27 01:43:21,167 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:43:21 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:43:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:43:21 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:43:21 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:43:21 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:43:21 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:43:21 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:43:21 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:43:21 at java.base/java.lang.Thread.run(Thread.java:829)
01:43:21 Caused by: Ice.CommunicatorDestroyedException: null
01:43:21 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:43:21 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:43:21 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:43:21 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:43:21 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:43:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:43:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:43:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:43:21 ... 7 common frames omitted
01:43:23 2024-10-27 01:43:23,607 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:43:23 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:43:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:43:23 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:43:23 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:43:23 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:43:23 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:43:23 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:43:23 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:43:23 at java.base/java.lang.Thread.run(Thread.java:829)
01:43:23 Caused by: Ice.CommunicatorDestroyedException: null
01:43:23 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:43:23 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:43:23 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:43:23 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:43:23 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:43:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:43:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:43:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:43:23 ... 7 common frames omitted
01:43:26 2024-10-27 01:43:26,018 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
01:43:26 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:43:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:43:26 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:43:26 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:43:26 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:43:26 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:43:26 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:43:26 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:43:26 at java.base/java.lang.Thread.run(Thread.java:829)
01:43:26 Caused by: Ice.CommunicatorDestroyedException: null
01:43:26 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:43:26 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:43:26 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:43:26 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:43:26 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:43:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:43:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:43:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:43:26 ... 7 common frames omitted
01:43:28 2024-10-27 01:43:28,647 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:43:28 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:43:28 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:43:28 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:43:28 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:43:28 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:43:28 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:43:28 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:43:28 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:43:28 at java.base/java.lang.Thread.run(Thread.java:829)
01:43:28 Caused by: Ice.CommunicatorDestroyedException: null
01:43:28 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:43:28 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:43:28 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:43:28 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:43:28 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:43:28 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:43:28 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:43:28 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:43:28 ... 7 common frames omitted
01:43:30 2024-10-27 01:43:30,868 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:43:30 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:43:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:43:30 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:43:30 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:43:30 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:43:30 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:43:30 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:43:30 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:43:30 at java.base/java.lang.Thread.run(Thread.java:829)
01:43:30 Caused by: Ice.CommunicatorDestroyedException: null
01:43:30 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:43:30 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:43:30 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:43:30 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:43:30 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:43:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:43:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:43:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:43:30 ... 7 common frames omitted
01:43:33 2024-10-27 01:43:33,081 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:43:33 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:43:33 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:43:33 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:43:33 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:43:33 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:43:33 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:43:33 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:43:33 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:43:33 at java.base/java.lang.Thread.run(Thread.java:829)
01:43:33 Caused by: Ice.CommunicatorDestroyedException: null
01:43:33 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:43:33 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:43:33 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:43:33 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:43:33 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:43:33 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:43:33 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:43:33 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:43:33 ... 7 common frames omitted
01:43:35 2024-10-27 01:43:35,061 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:43:35 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:43:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:43:35 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:43:35 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:43:35 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:43:35 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:43:35 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:43:35 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:43:35 at java.base/java.lang.Thread.run(Thread.java:829)
01:43:35 Caused by: Ice.CommunicatorDestroyedException: null
01:43:35 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:43:35 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:43:35 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:43:35 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:43:35 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:43:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:43:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:43:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:43:35 ... 7 common frames omitted
01:43:37 2024-10-27 01:43:37,336 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
01:43:37 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:43:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:43:37 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:43:37 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:43:37 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:43:37 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:43:37 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:43:37 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:43:37 at java.base/java.lang.Thread.run(Thread.java:829)
01:43:37 Caused by: Ice.CommunicatorDestroyedException: null
01:43:37 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:43:37 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:43:37 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:43:37 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:43:37 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:43:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:43:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:43:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:43:37 ... 7 common frames omitted
01:43:39 2024-10-27 01:43:39,391 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
01:43:39 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:43:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:43:39 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:43:39 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:43:39 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:43:39 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:43:39 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:43:39 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:43:39 at java.base/java.lang.Thread.run(Thread.java:829)
01:43:39 Caused by: Ice.CommunicatorDestroyedException: null
01:43:39 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:43:39 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:43:39 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:43:39 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:43:39 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:43:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:43:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:43:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:43:39 ... 7 common frames omitted
01:43:41 2024-10-27 01:43:41,806 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
01:43:41 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:43:41 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:43:41 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:43:41 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:43:41 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:43:41 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:43:41 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:43:41 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:43:41 at java.base/java.lang.Thread.run(Thread.java:829)
01:43:41 Caused by: Ice.CommunicatorDestroyedException: null
01:43:41 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:43:41 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:43:41 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:43:41 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:43:41 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:43:41 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:43:41 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:43:41 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:43:41 ... 7 common frames omitted
01:43:43 2024-10-27 01:43:43,575 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
01:43:43 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:43:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:43:43 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:43:43 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:43:43 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:43:43 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:43:43 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:43:43 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:43:43 at java.base/java.lang.Thread.run(Thread.java:829)
01:43:43 Caused by: Ice.CommunicatorDestroyedException: null
01:43:43 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:43:43 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:43:43 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:43:43 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:43:43 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:43:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:43:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:43:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:43:43 ... 7 common frames omitted
01:50:06 2024-10-27 01:50:06,083 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
01:50:06 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:50:06 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:50:06 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:50:06 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:50:06 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:50:06 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:50:06 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:50:06 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:50:06 at java.base/java.lang.Thread.run(Thread.java:829)
01:50:06 Caused by: Ice.CommunicatorDestroyedException: null
01:50:06 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:50:06 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:50:06 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:50:06 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:50:06 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:50:06 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:50:06 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:50:06 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:50:06 ... 7 common frames omitted
01:50:56 2024-10-27 01:50:56,513 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
01:50:56 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:50:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:50:56 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:50:56 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:50:56 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:50:56 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:50:56 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:50:56 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:50:56 at java.base/java.lang.Thread.run(Thread.java:829)
01:50:56 Caused by: Ice.CommunicatorDestroyedException: null
01:50:56 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:50:56 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:50:56 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:50:56 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:50:56 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:50:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:50:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:50:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:50:56 ... 7 common frames omitted
01:50:59 2024-10-27 01:50:59,773 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
01:50:59 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
01:50:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
01:50:59 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
01:50:59 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
01:50:59 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
01:50:59 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
01:50:59 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
01:50:59 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
01:50:59 at java.base/java.lang.Thread.run(Thread.java:829)
01:50:59 Caused by: Ice.CommunicatorDestroyedException: null
01:50:59 at IceInternal.Instance.proxyFactory(Instance.java:239)
01:50:59 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
01:50:59 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
01:50:59 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
01:50:59 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
01:50:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
01:50:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
01:50:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
01:50:59 ... 7 common frames omitted
02:04:31 Could not login with command line arguments.Glacier2.PermissionDeniedException
02:04:31 reason = "Password check failed for '2c92d9f4-985f-43e3-a8db-129c09a97219': [id=3014]"
02:04:31 at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
02:04:31 at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
02:04:31 at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
02:04:31 at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:490)
02:04:31 at java.base/java.lang.Class.newInstance(Class.java:584)
02:04:31 at IceInternal.BasicStream.createUserException(BasicStream.java:2785)
02:04:31 at IceInternal.BasicStream.access$300(BasicStream.java:14)
02:04:31 at IceInternal.BasicStream$EncapsDecoder11.throwException(BasicStream.java:3620)
02:04:31 at IceInternal.BasicStream.throwException(BasicStream.java:2291)
02:04:31 at IceInternal.OutgoingAsync.throwUserException(OutgoingAsync.java:399)
02:04:31 at Glacier2.RouterPrxHelper.end_createSession(RouterPrxHelper.java:178)
02:04:31 at Glacier2.RouterPrxHelper.createSession(RouterPrxHelper.java:49)
02:04:31 at Glacier2.RouterPrxHelper.createSession(RouterPrxHelper.java:41)
02:04:31 at omero.client.createSession(client.java:776)
02:04:31 at omero.client.createSession(client.java:719)
02:04:31 at omero.gateway.Gateway.createSession(Gateway.java:1045)
02:04:31 at omero.gateway.Gateway.connect(Gateway.java:297)
02:04:31 at integration.gateway.GatewayUsageTest.testLoginFallback(GatewayUsageTest.java:154)
02:04:31 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
02:04:31 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
02:04:31 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
02:04:31 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
02:04:31 at org.testng.internal.invokers.MethodInvocationHelper.invokeMethod(MethodInvocationHelper.java:135)
02:04:31 at org.testng.internal.invokers.InvokeMethodRunnable.runOne(InvokeMethodRunnable.java:44)
02:04:31 at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:72)
02:04:31 at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:10)
02:04:31 at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
02:04:31 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:04:31 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:04:31 at java.base/java.lang.Thread.run(Thread.java:829)
02:04:31 Could not login with command line arguments.Glacier2.PermissionDeniedException
02:04:31 reason = "Password check failed for '2c92d9f4-985f-43e3-a8db-129c09a97219': [id=3014]"
02:04:31 at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
02:04:31 at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
02:04:31 at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
02:04:31 at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:490)
02:04:31 at java.base/java.lang.Class.newInstance(Class.java:584)
02:04:31 at IceInternal.BasicStream.createUserException(BasicStream.java:2785)
02:04:31 at IceInternal.BasicStream.access$300(BasicStream.java:14)
02:04:31 at IceInternal.BasicStream$EncapsDecoder11.throwException(BasicStream.java:3620)
02:04:31 at IceInternal.BasicStream.throwException(BasicStream.java:2291)
02:04:31 at IceInternal.OutgoingAsync.throwUserException(OutgoingAsync.java:399)
02:04:31 at Glacier2.RouterPrxHelper.end_createSession(RouterPrxHelper.java:178)
02:04:31 at Glacier2.RouterPrxHelper.createSession(RouterPrxHelper.java:49)
02:04:31 at Glacier2.RouterPrxHelper.createSession(RouterPrxHelper.java:41)
02:04:31 at omero.client.createSession(client.java:776)
02:04:31 at omero.client.createSession(client.java:719)
02:04:31 at omero.gateway.Gateway.createSession(Gateway.java:1045)
02:04:31 at omero.gateway.Gateway.connect(Gateway.java:297)
02:04:31 at integration.gateway.GatewayUsageTest.testLoginFallback(GatewayUsageTest.java:154)
02:04:31 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
02:04:31 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
02:04:31 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
02:04:31 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
02:04:31 at org.testng.internal.invokers.MethodInvocationHelper.invokeMethod(MethodInvocationHelper.java:135)
02:04:31 at org.testng.internal.invokers.InvokeMethodRunnable.runOne(InvokeMethodRunnable.java:44)
02:04:31 at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:72)
02:04:31 at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:10)
02:04:31 at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
02:04:31 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:04:31 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:04:31 at java.base/java.lang.Thread.run(Thread.java:829)
02:04:31 Exception in thread "TestNG-method=testLoginFallback-1"
02:04:45 Support for FileAnnotationData is deprecated. Use OriginalFile instead.
02:04:46 Could not load table dataomero.IllegalArgumentException: start value can't be greater than stop value
02:04:46 at omero.gateway.facility.TablesFacility.query(TablesFacility.java:320)
02:04:46 at integration.gateway.TablesFacilityTest.testInvalidParams(TablesFacilityTest.java:220)
02:04:46 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
02:04:46 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
02:04:46 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
02:04:46 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
02:04:46 at org.testng.internal.invokers.MethodInvocationHelper.invokeMethod(MethodInvocationHelper.java:135)
02:04:46 at org.testng.internal.invokers.InvokeMethodRunnable.runOne(InvokeMethodRunnable.java:44)
02:04:46 at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:72)
02:04:46 at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:10)
02:04:46 at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
02:04:46 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:04:46 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:04:46 at java.base/java.lang.Thread.run(Thread.java:829)
02:04:46 Could not load table dataomero.IllegalArgumentException: start value can't be greater than stop value
02:04:46 at omero.gateway.facility.TablesFacility.query(TablesFacility.java:320)
02:04:46 at integration.gateway.TablesFacilityTest.testInvalidParams(TablesFacilityTest.java:220)
02:04:46 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
02:04:46 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
02:04:46 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
02:04:46 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
02:04:46 at org.testng.internal.invokers.MethodInvocationHelper.invokeMethod(MethodInvocationHelper.java:135)
02:04:46 at org.testng.internal.invokers.InvokeMethodRunnable.runOne(InvokeMethodRunnable.java:44)
02:04:46 at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:72)
02:04:46 at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:10)
02:04:46 at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
02:04:46 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:04:46 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:04:46 at java.base/java.lang.Thread.run(Thread.java:829)
02:04:46 Exception in thread "TestNG-method=testInvalidParams-1"
02:04:47 Could not load table dataomero.IllegalArgumentException: step value is greater than the specified range
02:04:47 at omero.gateway.facility.TablesFacility.query(TablesFacility.java:324)
02:04:47 at integration.gateway.TablesFacilityTest.testInvalidParams(TablesFacilityTest.java:229)
02:04:47 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
02:04:47 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
02:04:47 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
02:04:47 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
02:04:47 at org.testng.internal.invokers.MethodInvocationHelper.invokeMethod(MethodInvocationHelper.java:135)
02:04:47 at org.testng.internal.invokers.InvokeMethodRunnable.runOne(InvokeMethodRunnable.java:44)
02:04:47 at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:72)
02:04:47 at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:10)
02:04:47 at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
02:04:47 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:04:47 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:04:47 at java.base/java.lang.Thread.run(Thread.java:829)
02:04:47 Could not load table dataomero.IllegalArgumentException: step value is greater than the specified range
02:04:47 at omero.gateway.facility.TablesFacility.query(TablesFacility.java:324)
02:04:47 at integration.gateway.TablesFacilityTest.testInvalidParams(TablesFacilityTest.java:229)
02:04:47 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
02:04:47 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
02:04:47 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
02:04:47 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
02:04:47 at org.testng.internal.invokers.MethodInvocationHelper.invokeMethod(MethodInvocationHelper.java:135)
02:04:47 at org.testng.internal.invokers.InvokeMethodRunnable.runOne(InvokeMethodRunnable.java:44)
02:04:47 at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:72)
02:04:47 at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:10)
02:04:47 at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
02:04:47 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:04:47 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:04:47 at java.base/java.lang.Thread.run(Thread.java:829)
02:04:47 Exception in thread "TestNG-method=testInvalidParams-1"
02:04:47 No concrete type specified for column 'column1', using Object.toString()
02:04:48 Request rows 660 to 674; columns [1, 5, 7, 3, 8, 4, 10, 0]
02:04:49 Request rows 1339 to 1423; columns [9, 5, 2, 3, 0, 1, 6]
02:04:50 Request rows 734 to 771; columns [9, 3, 1, 4, 5]
02:04:51 Request rows 484 to 578; columns []
02:04:53 Request rows 1475 to 1484; columns [2, 7, 3, 8, 10, 1, 9]
02:05:20 2024-10-27 02:05:20,244 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
02:05:20 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:05:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:05:20 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:05:20 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:05:20 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:05:20 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:05:20 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:05:20 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:05:20 at java.base/java.lang.Thread.run(Thread.java:829)
02:05:20 Caused by: Ice.CommunicatorDestroyedException: null
02:05:20 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:05:20 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:05:20 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:05:20 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:05:20 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:05:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:05:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:05:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:05:20 ... 7 common frames omitted
02:06:44 2024-10-27 02:06:44,615 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
02:06:44 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:06:44 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:06:44 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:06:44 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:06:44 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:06:44 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:06:44 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:06:44 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:06:44 at java.base/java.lang.Thread.run(Thread.java:829)
02:06:44 Caused by: Ice.CommunicatorDestroyedException: null
02:06:44 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:06:44 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:06:44 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:06:44 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:06:44 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:06:44 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:06:44 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:06:44 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:06:44 ... 7 common frames omitted
02:06:49 2024-10-27 02:06:49,154 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
02:06:49 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:06:49 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:06:49 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:06:49 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:06:49 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:06:49 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:06:49 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:06:49 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:06:49 at java.base/java.lang.Thread.run(Thread.java:829)
02:06:49 Caused by: Ice.CommunicatorDestroyedException: null
02:06:49 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:06:49 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:06:49 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:06:49 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:06:49 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:06:49 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:06:49 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:06:49 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:06:49 ... 7 common frames omitted
02:06:53 2024-10-27 02:06:53,514 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
02:06:53 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:06:53 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:06:53 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:06:53 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:06:53 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:06:53 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:06:53 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:06:53 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:06:53 at java.base/java.lang.Thread.run(Thread.java:829)
02:06:53 Caused by: Ice.CommunicatorDestroyedException: null
02:06:53 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:06:53 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:06:53 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:06:53 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:06:53 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:06:53 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:06:53 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:06:53 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:06:53 ... 7 common frames omitted
02:06:57 2024-10-27 02:06:57,983 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
02:06:57 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:06:57 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:06:57 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:06:57 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:06:57 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:06:57 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:06:57 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:06:57 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:06:57 at java.base/java.lang.Thread.run(Thread.java:829)
02:06:57 Caused by: Ice.CommunicatorDestroyedException: null
02:06:57 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:06:57 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:06:57 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:06:57 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:06:57 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:06:57 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:06:57 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:06:57 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:06:57 ... 7 common frames omitted
02:07:01 2024-10-27 02:07:01,611 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
02:07:01 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:07:01 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:07:01 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:07:01 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:07:01 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:07:01 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:07:01 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:07:01 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:07:01 at java.base/java.lang.Thread.run(Thread.java:829)
02:07:01 Caused by: Ice.CommunicatorDestroyedException: null
02:07:01 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:07:01 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:07:01 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:07:01 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:07:01 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:07:01 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:07:01 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:07:01 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:07:01 ... 7 common frames omitted
02:07:05 2024-10-27 02:07:05,032 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
02:07:05 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:07:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:07:05 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:07:05 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:07:05 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:07:05 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:07:05 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:07:05 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:07:05 at java.base/java.lang.Thread.run(Thread.java:829)
02:07:05 Caused by: Ice.CommunicatorDestroyedException: null
02:07:05 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:07:05 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:07:05 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:07:05 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:07:05 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:07:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:07:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:07:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:07:05 ... 7 common frames omitted
02:07:08 2024-10-27 02:07:08,578 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
02:07:08 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:07:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:07:08 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:07:08 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:07:08 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:07:08 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:07:08 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:07:08 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:07:08 at java.base/java.lang.Thread.run(Thread.java:829)
02:07:08 Caused by: Ice.CommunicatorDestroyedException: null
02:07:08 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:07:08 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:07:08 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:07:08 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:07:08 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:07:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:07:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:07:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:07:08 ... 7 common frames omitted
02:07:12 2024-10-27 02:07:12,073 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
02:07:12 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:07:12 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:07:12 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:07:12 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:07:12 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:07:12 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:07:12 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:07:12 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:07:12 at java.base/java.lang.Thread.run(Thread.java:829)
02:07:12 Caused by: Ice.CommunicatorDestroyedException: null
02:07:12 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:07:12 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:07:12 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:07:12 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:07:12 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:07:12 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:07:12 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:07:12 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:07:12 ... 7 common frames omitted
02:07:15 2024-10-27 02:07:15,424 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
02:07:15 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:07:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:07:15 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:07:15 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:07:15 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:07:15 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:07:15 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:07:15 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:07:15 at java.base/java.lang.Thread.run(Thread.java:829)
02:07:15 Caused by: Ice.CommunicatorDestroyedException: null
02:07:15 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:07:15 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:07:15 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:07:15 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:07:15 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:07:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:07:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:07:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:07:15 ... 7 common frames omitted
02:07:17 2024-10-27 02:07:17,377 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
02:07:17 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:07:17 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:07:17 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:07:17 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:07:17 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:07:17 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:07:17 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:07:17 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:07:17 at java.base/java.lang.Thread.run(Thread.java:829)
02:07:17 Caused by: Ice.CommunicatorDestroyedException: null
02:07:17 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:07:17 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:07:17 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:07:17 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:07:17 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:07:17 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:07:17 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:07:17 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:07:17 ... 7 common frames omitted
02:07:19 2024-10-27 02:07:19,219 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
02:07:19 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:07:19 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:07:19 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:07:19 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:07:19 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:07:19 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:07:19 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:07:19 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:07:19 at java.base/java.lang.Thread.run(Thread.java:829)
02:07:19 Caused by: Ice.CommunicatorDestroyedException: null
02:07:19 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:07:19 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:07:19 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:07:19 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:07:19 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:07:19 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:07:19 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:07:19 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:07:19 ... 7 common frames omitted
02:07:21 2024-10-27 02:07:21,329 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
02:07:21 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:07:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:07:21 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:07:21 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:07:21 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:07:21 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:07:21 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:07:21 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:07:21 at java.base/java.lang.Thread.run(Thread.java:829)
02:07:21 Caused by: Ice.CommunicatorDestroyedException: null
02:07:21 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:07:21 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:07:21 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:07:21 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:07:21 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:07:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:07:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:07:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:07:21 ... 7 common frames omitted
02:07:23 2024-10-27 02:07:23,710 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
02:07:23 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:07:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:07:23 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:07:23 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:07:23 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:07:23 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:07:23 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:07:23 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:07:23 at java.base/java.lang.Thread.run(Thread.java:829)
02:07:23 Caused by: Ice.CommunicatorDestroyedException: null
02:07:23 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:07:23 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:07:23 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:07:23 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:07:23 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:07:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:07:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:07:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:07:23 ... 7 common frames omitted
02:07:26 2024-10-27 02:07:26,829 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
02:07:26 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:07:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:07:26 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:07:26 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:07:26 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:07:26 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:07:26 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:07:26 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:07:26 at java.base/java.lang.Thread.run(Thread.java:829)
02:07:26 Caused by: Ice.CommunicatorDestroyedException: null
02:07:26 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:07:26 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:07:26 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:07:26 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:07:26 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:07:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:07:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:07:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:07:26 ... 7 common frames omitted
02:07:29 2024-10-27 02:07:29,736 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
02:07:29 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:07:29 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:07:29 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:07:29 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:07:29 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:07:29 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:07:29 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:07:29 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:07:29 at java.base/java.lang.Thread.run(Thread.java:829)
02:07:29 Caused by: Ice.CommunicatorDestroyedException: null
02:07:29 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:07:29 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:07:29 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:07:29 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:07:29 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:07:29 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:07:29 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:07:29 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:07:29 ... 7 common frames omitted
02:07:32 2024-10-27 02:07:32,703 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
02:07:32 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:07:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:07:32 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:07:32 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:07:32 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:07:32 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:07:32 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:07:32 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:07:32 at java.base/java.lang.Thread.run(Thread.java:829)
02:07:32 Caused by: Ice.CommunicatorDestroyedException: null
02:07:32 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:07:32 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:07:32 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:07:32 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:07:32 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:07:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:07:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:07:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:07:32 ... 7 common frames omitted
02:07:34 2024-10-27 02:07:34,964 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
02:07:34 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:07:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:07:34 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:07:34 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:07:34 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:07:34 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:07:34 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:07:34 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:07:34 at java.base/java.lang.Thread.run(Thread.java:829)
02:07:34 Caused by: Ice.CommunicatorDestroyedException: null
02:07:34 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:07:34 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:07:34 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:07:34 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:07:34 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:07:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:07:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:07:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:07:34 ... 7 common frames omitted
02:07:37 2024-10-27 02:07:37,304 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
02:07:37 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:07:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:07:37 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:07:37 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:07:37 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:07:37 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:07:37 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:07:37 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:07:37 at java.base/java.lang.Thread.run(Thread.java:829)
02:07:37 Caused by: Ice.CommunicatorDestroyedException: null
02:07:37 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:07:37 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:07:37 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:07:37 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:07:37 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:07:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:07:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:07:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:07:37 ... 7 common frames omitted
02:07:39 2024-10-27 02:07:39,565 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
02:07:39 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:07:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:07:39 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:07:39 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:07:39 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:07:39 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:07:39 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:07:39 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:07:39 at java.base/java.lang.Thread.run(Thread.java:829)
02:07:39 Caused by: Ice.CommunicatorDestroyedException: null
02:07:39 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:07:39 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:07:39 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:07:39 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:07:39 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:07:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:07:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:07:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:07:39 ... 7 common frames omitted
02:07:41 2024-10-27 02:07:41,723 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
02:07:41 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:07:41 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:07:41 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:07:41 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:07:41 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:07:41 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:07:41 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:07:41 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:07:41 at java.base/java.lang.Thread.run(Thread.java:829)
02:07:41 Caused by: Ice.CommunicatorDestroyedException: null
02:07:41 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:07:41 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:07:41 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:07:41 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:07:41 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:07:41 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:07:41 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:07:41 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:07:41 ... 7 common frames omitted
02:07:43 2024-10-27 02:07:43,937 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
02:07:43 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:07:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:07:43 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:07:43 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:07:43 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:07:43 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:07:43 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:07:43 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:07:43 at java.base/java.lang.Thread.run(Thread.java:829)
02:07:43 Caused by: Ice.CommunicatorDestroyedException: null
02:07:43 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:07:43 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:07:43 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:07:43 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:07:43 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:07:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:07:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:07:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:07:43 ... 7 common frames omitted
02:07:45 2024-10-27 02:07:45,362 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
02:07:45 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:07:45 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:07:45 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:07:45 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:07:45 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:07:45 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:07:45 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:07:45 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:07:45 at java.base/java.lang.Thread.run(Thread.java:829)
02:07:45 Caused by: Ice.CommunicatorDestroyedException: null
02:07:45 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:07:45 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:07:45 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:07:45 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:07:45 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:07:45 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:07:45 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:07:45 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:07:45 ... 7 common frames omitted
02:07:46 2024-10-27 02:07:46,837 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
02:07:46 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:07:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:07:46 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:07:46 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:07:46 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:07:46 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:07:46 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:07:46 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:07:46 at java.base/java.lang.Thread.run(Thread.java:829)
02:07:46 Caused by: Ice.CommunicatorDestroyedException: null
02:07:46 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:07:46 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:07:46 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:07:46 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:07:46 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:07:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:07:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:07:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:07:46 ... 7 common frames omitted
02:07:48 2024-10-27 02:07:48,398 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
02:07:48 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:07:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:07:48 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:07:48 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:07:48 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:07:48 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:07:48 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:07:48 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:07:48 at java.base/java.lang.Thread.run(Thread.java:829)
02:07:48 Caused by: Ice.CommunicatorDestroyedException: null
02:07:48 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:07:48 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:07:48 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:07:48 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:07:48 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:07:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:07:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:07:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:07:48 ... 7 common frames omitted
02:07:50 2024-10-27 02:07:50,580 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
02:07:50 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:07:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:07:50 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:07:50 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:07:50 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:07:50 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:07:50 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:07:50 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:07:50 at java.base/java.lang.Thread.run(Thread.java:829)
02:07:50 Caused by: Ice.CommunicatorDestroyedException: null
02:07:50 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:07:50 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:07:50 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:07:50 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:07:50 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:07:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:07:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:07:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:07:50 ... 7 common frames omitted
02:07:54 2024-10-27 02:07:54,515 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
02:07:54 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:07:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:07:54 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:07:54 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:07:54 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:07:54 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:07:54 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:07:54 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:07:54 at java.base/java.lang.Thread.run(Thread.java:829)
02:07:54 Caused by: Ice.CommunicatorDestroyedException: null
02:07:54 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:07:54 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:07:54 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:07:54 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:07:54 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:07:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:07:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:07:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:07:54 ... 7 common frames omitted
02:07:58 2024-10-27 02:07:58,617 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
02:07:58 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:07:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:07:58 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:07:58 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:07:58 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:07:58 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:07:58 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:07:58 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:07:58 at java.base/java.lang.Thread.run(Thread.java:829)
02:07:58 Caused by: Ice.CommunicatorDestroyedException: null
02:07:58 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:07:58 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:07:58 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:07:58 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:07:58 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:07:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:07:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:07:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:07:58 ... 7 common frames omitted
02:08:02 2024-10-27 02:08:02,697 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
02:08:02 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:08:02 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:08:02 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:08:02 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:08:02 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:08:02 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:08:02 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:08:02 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:08:02 at java.base/java.lang.Thread.run(Thread.java:829)
02:08:02 Caused by: Ice.CommunicatorDestroyedException: null
02:08:02 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:08:02 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:08:02 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:08:02 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:08:02 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:08:02 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:08:02 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:08:02 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:08:02 ... 7 common frames omitted
02:08:06 2024-10-27 02:08:06,691 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
02:08:06 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:08:06 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:08:06 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:08:06 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:08:06 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:08:06 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:08:06 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:08:06 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:08:06 at java.base/java.lang.Thread.run(Thread.java:829)
02:08:06 Caused by: Ice.CommunicatorDestroyedException: null
02:08:06 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:08:06 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:08:06 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:08:06 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:08:06 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:08:06 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:08:06 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:08:06 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:08:06 ... 7 common frames omitted
02:08:08 2024-10-27 02:08:08,974 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
02:08:08 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:08:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:08:08 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:08:08 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:08:08 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:08:08 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:08:08 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:08:08 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:08:08 at java.base/java.lang.Thread.run(Thread.java:829)
02:08:08 Caused by: Ice.CommunicatorDestroyedException: null
02:08:08 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:08:08 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:08:08 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:08:08 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:08:08 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:08:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:08:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:08:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:08:08 ... 7 common frames omitted
02:08:10 2024-10-27 02:08:10,622 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
02:08:10 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:08:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:08:10 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:08:10 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:08:10 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:08:10 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:08:10 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:08:10 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:08:10 at java.base/java.lang.Thread.run(Thread.java:829)
02:08:10 Caused by: Ice.CommunicatorDestroyedException: null
02:08:10 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:08:10 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:08:10 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:08:10 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:08:10 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:08:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:08:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:08:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:08:10 ... 7 common frames omitted
02:08:13 2024-10-27 02:08:13,875 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
02:08:13 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:08:13 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:08:13 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:08:13 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:08:13 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:08:13 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:08:13 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:08:13 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:08:13 at java.base/java.lang.Thread.run(Thread.java:829)
02:08:13 Caused by: Ice.CommunicatorDestroyedException: null
02:08:13 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:08:13 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:08:13 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:08:13 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:08:13 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:08:13 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:08:13 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:08:13 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:08:13 ... 7 common frames omitted
02:08:17 2024-10-27 02:08:17,228 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
02:08:17 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:08:17 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:08:17 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:08:17 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:08:17 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:08:17 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:08:17 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:08:17 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:08:17 at java.base/java.lang.Thread.run(Thread.java:829)
02:08:17 Caused by: Ice.CommunicatorDestroyedException: null
02:08:17 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:08:17 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:08:17 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:08:17 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:08:17 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:08:17 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:08:17 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:08:17 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:08:17 ... 7 common frames omitted
02:08:20 2024-10-27 02:08:20,819 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
02:08:20 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:08:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:08:20 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:08:20 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:08:20 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:08:20 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:08:20 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:08:20 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:08:20 at java.base/java.lang.Thread.run(Thread.java:829)
02:08:20 Caused by: Ice.CommunicatorDestroyedException: null
02:08:20 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:08:20 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:08:20 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:08:20 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:08:20 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:08:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:08:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:08:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:08:20 ... 7 common frames omitted
02:08:24 2024-10-27 02:08:24,184 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
02:08:24 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:08:24 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:08:24 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:08:24 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:08:24 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:08:24 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:08:24 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:08:24 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:08:24 at java.base/java.lang.Thread.run(Thread.java:829)
02:08:24 Caused by: Ice.CommunicatorDestroyedException: null
02:08:24 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:08:24 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:08:24 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:08:24 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:08:24 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:08:24 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:08:24 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:08:24 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:08:24 ... 7 common frames omitted
02:08:25 2024-10-27 02:08:25,861 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
02:08:25 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:08:25 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:08:25 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:08:25 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:08:25 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:08:25 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:08:25 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:08:25 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:08:25 at java.base/java.lang.Thread.run(Thread.java:829)
02:08:25 Caused by: Ice.CommunicatorDestroyedException: null
02:08:25 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:08:25 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:08:25 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:08:25 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:08:25 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:08:25 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:08:25 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:08:25 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:08:25 ... 7 common frames omitted
02:08:27 2024-10-27 02:08:27,527 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
02:08:27 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:08:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:08:27 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:08:27 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:08:27 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:08:27 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:08:27 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:08:27 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:08:27 at java.base/java.lang.Thread.run(Thread.java:829)
02:08:27 Caused by: Ice.CommunicatorDestroyedException: null
02:08:27 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:08:27 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:08:27 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:08:27 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:08:27 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:08:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:08:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:08:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:08:27 ... 7 common frames omitted
02:08:29 2024-10-27 02:08:29,217 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
02:08:29 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:08:29 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:08:29 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:08:29 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:08:29 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:08:29 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:08:29 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:08:29 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:08:29 at java.base/java.lang.Thread.run(Thread.java:829)
02:08:29 Caused by: Ice.CommunicatorDestroyedException: null
02:08:29 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:08:29 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:08:29 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:08:29 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:08:29 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:08:29 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:08:29 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:08:29 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:08:29 ... 7 common frames omitted
02:09:07 2024-10-27 02:09:07,331 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
02:09:07 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:09:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:09:07 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:09:07 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:09:07 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:09:07 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:09:07 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:09:07 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:09:07 at java.base/java.lang.Thread.run(Thread.java:829)
02:09:07 Caused by: Ice.CommunicatorDestroyedException: null
02:09:07 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:09:07 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:09:07 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:09:07 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:09:07 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:09:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:09:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:09:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:09:07 ... 7 common frames omitted
02:09:12 2024-10-27 02:09:12,226 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
02:09:12 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:09:12 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:09:12 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:09:12 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:09:12 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:09:12 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:09:12 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:09:12 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:09:12 at java.base/java.lang.Thread.run(Thread.java:829)
02:09:12 Caused by: Ice.CommunicatorDestroyedException: null
02:09:12 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:09:12 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:09:12 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:09:12 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:09:12 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:09:12 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:09:12 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:09:12 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:09:12 ... 7 common frames omitted
02:09:16 2024-10-27 02:09:16,678 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
02:09:16 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:09:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:09:16 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:09:16 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:09:16 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:09:16 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:09:16 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:09:16 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:09:16 at java.base/java.lang.Thread.run(Thread.java:829)
02:09:16 Caused by: Ice.CommunicatorDestroyedException: null
02:09:16 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:09:16 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:09:16 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:09:16 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:09:16 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:09:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:09:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:09:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:09:16 ... 7 common frames omitted
02:09:33 2024-10-27 02:09:33,311 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
02:09:33 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:09:33 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:09:33 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:09:33 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:09:33 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:09:33 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:09:33 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:09:33 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:09:33 at java.base/java.lang.Thread.run(Thread.java:829)
02:09:33 Caused by: Ice.CommunicatorDestroyedException: null
02:09:33 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:09:33 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:09:33 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:09:33 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:09:33 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:09:33 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:09:33 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:09:33 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:09:33 ... 7 common frames omitted
02:10:14 2024-10-27 02:10:14,656 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
02:10:14 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:14 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:14 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:14 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:14 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:14 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:14 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:14 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:14 Caused by: Ice.CommunicatorDestroyedException: null
02:10:14 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:14 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:14 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:14 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:14 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:14 ... 7 common frames omitted
02:10:26 2024-10-27 02:10:26,260 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
02:10:26 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:26 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:26 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:26 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:26 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:26 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:26 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:26 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:26 Caused by: Ice.CommunicatorDestroyedException: null
02:10:26 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:26 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:26 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:26 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:26 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:26 ... 7 common frames omitted
02:10:27 2024-10-27 02:10:27,415 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
02:10:27 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:27 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:27 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:27 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:27 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:27 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:27 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:27 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:27 Caused by: Ice.CommunicatorDestroyedException: null
02:10:27 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:27 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:27 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:27 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:27 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:27 ... 7 common frames omitted
02:10:29 2024-10-27 02:10:29,993 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
02:10:29 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:29 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:29 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:29 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:29 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:29 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:29 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:29 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:29 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:29 Caused by: Ice.CommunicatorDestroyedException: null
02:10:29 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:29 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:29 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:29 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:29 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:29 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:29 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:29 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:29 ... 7 common frames omitted
02:10:31 2024-10-27 02:10:31,441 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
02:10:31 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:31 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:31 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:31 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:31 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:31 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:31 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:31 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:31 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:31 Caused by: Ice.CommunicatorDestroyedException: null
02:10:31 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:31 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:31 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:31 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:31 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:31 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:31 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:31 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:31 ... 7 common frames omitted
02:10:32 2024-10-27 02:10:32,787 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
02:10:32 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:32 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:32 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:32 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:32 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:32 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:32 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:32 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:32 Caused by: Ice.CommunicatorDestroyedException: null
02:10:32 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:32 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:32 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:32 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:32 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:32 ... 7 common frames omitted
02:10:34 2024-10-27 02:10:34,844 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
02:10:34 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:34 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:34 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:34 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:34 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:34 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:34 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:34 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:34 Caused by: Ice.CommunicatorDestroyedException: null
02:10:34 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:34 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:34 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:34 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:34 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:34 ... 7 common frames omitted
02:10:36 2024-10-27 02:10:36,113 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
02:10:36 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:36 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:36 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:36 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:36 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:36 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:36 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:36 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:36 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:36 Caused by: Ice.CommunicatorDestroyedException: null
02:10:36 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:36 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:36 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:36 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:36 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:36 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:36 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:36 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:36 ... 7 common frames omitted
02:10:37 2024-10-27 02:10:37,505 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
02:10:37 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:37 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:37 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:37 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:37 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:37 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:37 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:37 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:37 Caused by: Ice.CommunicatorDestroyedException: null
02:10:37 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:37 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:37 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:37 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:37 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:37 ... 7 common frames omitted
02:10:39 2024-10-27 02:10:39,259 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
02:10:39 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:39 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:39 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:39 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:39 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:39 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:39 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:39 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:39 Caused by: Ice.CommunicatorDestroyedException: null
02:10:39 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:39 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:39 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:39 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:39 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:39 ... 7 common frames omitted
02:10:42 2024-10-27 02:10:42,171 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
02:10:42 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:42 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:42 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:42 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:42 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:42 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:42 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:42 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:42 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:42 Caused by: Ice.CommunicatorDestroyedException: null
02:10:42 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:42 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:42 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:42 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:42 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:42 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:42 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:42 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:42 ... 7 common frames omitted
02:10:43 2024-10-27 02:10:43,048 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
02:10:43 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:43 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:43 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:43 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:43 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:43 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:43 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:43 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:43 Caused by: Ice.CommunicatorDestroyedException: null
02:10:43 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:43 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:43 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:43 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:43 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:43 ... 7 common frames omitted
02:10:44 2024-10-27 02:10:44,392 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
02:10:44 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:44 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:44 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:44 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:44 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:44 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:44 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:44 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:44 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:44 Caused by: Ice.CommunicatorDestroyedException: null
02:10:44 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:44 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:44 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:44 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:44 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:44 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:44 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:44 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:44 ... 7 common frames omitted
02:10:45 2024-10-27 02:10:45,199 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
02:10:45 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:45 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:45 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:45 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:45 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:45 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:45 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:45 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:45 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:45 Caused by: Ice.CommunicatorDestroyedException: null
02:10:45 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:45 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:45 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:45 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:45 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:45 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:45 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:45 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:45 ... 7 common frames omitted
02:10:46 2024-10-27 02:10:46,520 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
02:10:46 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:46 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:46 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:46 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:46 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:46 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:46 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:46 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:46 Caused by: Ice.CommunicatorDestroyedException: null
02:10:46 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:46 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:46 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:46 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:46 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:46 ... 7 common frames omitted
02:10:47 2024-10-27 02:10:47,372 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
02:10:47 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:47 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:47 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:47 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:47 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:47 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:47 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:47 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:47 Caused by: Ice.CommunicatorDestroyedException: null
02:10:47 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:47 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:47 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:47 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:47 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:47 ... 7 common frames omitted
02:10:48 2024-10-27 02:10:48,781 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
02:10:48 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:48 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:48 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:48 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:48 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:48 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:48 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:48 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:48 Caused by: Ice.CommunicatorDestroyedException: null
02:10:48 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:48 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:48 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:48 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:48 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:48 ... 7 common frames omitted
02:10:49 2024-10-27 02:10:49,633 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
02:10:49 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:49 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:49 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:49 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:49 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:49 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:49 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:49 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:49 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:49 Caused by: Ice.CommunicatorDestroyedException: null
02:10:49 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:49 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:49 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:49 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:49 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:49 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:49 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:49 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:49 ... 7 common frames omitted
02:10:51 2024-10-27 02:10:50,999 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
02:10:51 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:51 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:51 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:51 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:51 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:51 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:51 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:51 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:51 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:51 Caused by: Ice.CommunicatorDestroyedException: null
02:10:51 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:51 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:51 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:51 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:51 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:51 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:51 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:51 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:51 ... 7 common frames omitted
02:10:51 2024-10-27 02:10:51,832 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
02:10:51 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:51 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:51 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:51 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:51 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:51 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:51 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:51 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:51 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:51 Caused by: Ice.CommunicatorDestroyedException: null
02:10:51 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:51 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:51 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:51 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:51 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:51 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:51 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:51 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:51 ... 7 common frames omitted
02:10:53 2024-10-27 02:10:53,147 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
02:10:53 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:53 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:53 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:53 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:53 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:53 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:53 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:53 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:53 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:53 Caused by: Ice.CommunicatorDestroyedException: null
02:10:53 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:53 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:53 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:53 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:53 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:53 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:53 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:53 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:53 ... 7 common frames omitted
02:10:53 2024-10-27 02:10:53,991 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
02:10:53 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:53 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:53 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:53 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:53 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:53 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:53 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:53 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:53 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:53 Caused by: Ice.CommunicatorDestroyedException: null
02:10:53 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:53 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:53 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:53 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:53 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:53 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:53 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:53 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:53 ... 7 common frames omitted
02:10:55 2024-10-27 02:10:55,307 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
02:10:55 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:55 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:55 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:55 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:55 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:55 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:55 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:55 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:55 Caused by: Ice.CommunicatorDestroyedException: null
02:10:55 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:55 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:55 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:55 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:55 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:55 ... 7 common frames omitted
02:10:56 2024-10-27 02:10:56,225 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
02:10:56 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:56 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:56 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:56 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:56 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:56 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:56 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:56 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:56 Caused by: Ice.CommunicatorDestroyedException: null
02:10:56 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:56 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:56 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:56 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:56 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:56 ... 7 common frames omitted
02:10:57 2024-10-27 02:10:57,597 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
02:10:57 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:57 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:57 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:57 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:57 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:57 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:57 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:57 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:57 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:57 Caused by: Ice.CommunicatorDestroyedException: null
02:10:57 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:57 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:57 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:57 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:57 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:57 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:57 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:57 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:57 ... 7 common frames omitted
02:10:58 2024-10-27 02:10:58,508 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
02:10:58 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:10:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:10:58 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:10:58 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:10:58 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:10:58 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:10:58 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:10:58 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:10:58 at java.base/java.lang.Thread.run(Thread.java:829)
02:10:58 Caused by: Ice.CommunicatorDestroyedException: null
02:10:58 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:10:58 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:10:58 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:10:58 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:10:58 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:10:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:10:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:10:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:10:58 ... 7 common frames omitted
02:11:00 2024-10-27 02:11:00,099 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
02:11:00 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:00 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:00 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:00 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:00 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:00 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:00 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:00 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:00 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:00 Caused by: Ice.CommunicatorDestroyedException: null
02:11:00 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:00 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:00 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:00 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:00 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:00 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:00 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:00 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:00 ... 7 common frames omitted
02:11:00 2024-10-27 02:11:00,904 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
02:11:00 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:00 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:00 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:00 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:00 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:00 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:00 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:00 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:00 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:00 Caused by: Ice.CommunicatorDestroyedException: null
02:11:00 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:00 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:00 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:00 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:00 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:00 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:00 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:00 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:00 ... 7 common frames omitted
02:11:02 2024-10-27 02:11:02,401 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
02:11:02 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:02 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:02 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:02 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:02 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:02 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:02 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:02 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:02 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:02 Caused by: Ice.CommunicatorDestroyedException: null
02:11:02 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:02 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:02 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:02 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:02 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:02 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:02 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:02 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:02 ... 7 common frames omitted
02:11:03 2024-10-27 02:11:03,299 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
02:11:03 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:03 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:03 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:03 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:03 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:03 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:03 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:03 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:03 Caused by: Ice.CommunicatorDestroyedException: null
02:11:03 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:03 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:03 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:03 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:03 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:03 ... 7 common frames omitted
02:11:05 2024-10-27 02:11:05,063 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
02:11:05 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:05 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:05 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:05 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:05 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:05 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:05 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:05 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:05 Caused by: Ice.CommunicatorDestroyedException: null
02:11:05 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:05 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:05 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:05 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:05 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:05 ... 7 common frames omitted
02:11:05 2024-10-27 02:11:05,937 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
02:11:05 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:05 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:05 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:05 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:05 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:05 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:05 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:05 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:05 Caused by: Ice.CommunicatorDestroyedException: null
02:11:05 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:05 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:05 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:05 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:05 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:05 ... 7 common frames omitted
02:11:07 2024-10-27 02:11:07,502 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
02:11:07 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:07 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:07 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:07 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:07 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:07 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:07 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:07 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:07 Caused by: Ice.CommunicatorDestroyedException: null
02:11:07 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:07 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:07 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:07 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:07 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:07 ... 7 common frames omitted
02:11:08 2024-10-27 02:11:08,411 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
02:11:08 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:08 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:08 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:08 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:08 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:08 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:08 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:08 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:08 Caused by: Ice.CommunicatorDestroyedException: null
02:11:08 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:08 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:08 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:08 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:08 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:08 ... 7 common frames omitted
02:11:09 2024-10-27 02:11:09,860 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
02:11:09 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:09 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:09 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:09 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:09 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:09 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:09 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:09 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:09 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:09 Caused by: Ice.CommunicatorDestroyedException: null
02:11:09 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:09 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:09 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:09 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:09 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:09 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:09 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:09 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:09 ... 7 common frames omitted
02:11:10 2024-10-27 02:11:10,673 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
02:11:10 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:10 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:10 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:10 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:10 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:10 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:10 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:10 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:10 Caused by: Ice.CommunicatorDestroyedException: null
02:11:10 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:10 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:10 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:10 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:10 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:10 ... 7 common frames omitted
02:11:12 2024-10-27 02:11:12,440 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
02:11:12 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:12 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:12 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:12 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:12 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:12 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:12 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:12 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:12 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:12 Caused by: Ice.CommunicatorDestroyedException: null
02:11:12 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:12 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:12 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:12 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:12 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:12 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:12 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:12 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:12 ... 7 common frames omitted
02:11:13 2024-10-27 02:11:13,288 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
02:11:13 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:13 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:13 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:13 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:13 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:13 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:13 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:13 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:13 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:13 Caused by: Ice.CommunicatorDestroyedException: null
02:11:13 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:13 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:13 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:13 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:13 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:13 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:13 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:13 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:13 ... 7 common frames omitted
02:11:14 2024-10-27 02:11:14,861 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
02:11:14 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:14 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:14 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:14 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:14 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:14 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:14 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:14 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:14 Caused by: Ice.CommunicatorDestroyedException: null
02:11:14 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:14 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:14 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:14 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:14 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:14 ... 7 common frames omitted
02:11:15 2024-10-27 02:11:15,751 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
02:11:15 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:15 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:15 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:15 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:15 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:15 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:15 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:15 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:15 Caused by: Ice.CommunicatorDestroyedException: null
02:11:15 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:15 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:15 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:15 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:15 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:15 ... 7 common frames omitted
02:11:17 2024-10-27 02:11:17,334 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
02:11:17 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:17 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:17 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:17 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:17 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:17 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:17 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:17 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:17 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:17 Caused by: Ice.CommunicatorDestroyedException: null
02:11:17 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:17 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:17 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:17 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:17 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:17 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:17 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:17 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:17 ... 7 common frames omitted
02:11:18 2024-10-27 02:11:18,332 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
02:11:18 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:18 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:18 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:18 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:18 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:18 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:18 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:18 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:18 Caused by: Ice.CommunicatorDestroyedException: null
02:11:18 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:18 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:18 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:18 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:18 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:18 ... 7 common frames omitted
02:11:23 2024-10-27 02:11:23,978 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
02:11:23 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:23 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:23 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:23 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:23 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:23 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:23 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:23 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:23 Caused by: Ice.CommunicatorDestroyedException: null
02:11:23 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:23 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:23 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:23 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:23 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:23 ... 7 common frames omitted
02:11:24 2024-10-27 02:11:24,818 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
02:11:24 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:24 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:24 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:24 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:24 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:24 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:24 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:24 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:24 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:24 Caused by: Ice.CommunicatorDestroyedException: null
02:11:24 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:24 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:24 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:24 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:24 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:24 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:24 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:24 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:24 ... 7 common frames omitted
02:11:31 2024-10-27 02:11:31,418 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
02:11:31 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:31 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:31 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:31 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:31 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:31 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:31 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:31 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:31 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:31 Caused by: Ice.CommunicatorDestroyedException: null
02:11:31 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:31 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:31 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:31 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:31 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:31 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:31 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:31 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:31 ... 7 common frames omitted
02:11:32 2024-10-27 02:11:32,292 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
02:11:32 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:32 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:32 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:32 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:32 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:32 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:32 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:32 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:32 Caused by: Ice.CommunicatorDestroyedException: null
02:11:32 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:32 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:32 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:32 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:32 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:32 ... 7 common frames omitted
02:11:38 2024-10-27 02:11:38,956 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
02:11:38 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:38 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:38 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:38 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:38 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:38 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:38 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:38 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:38 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:38 Caused by: Ice.CommunicatorDestroyedException: null
02:11:38 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:38 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:38 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:38 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:38 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:38 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:38 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:38 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:38 ... 7 common frames omitted
02:11:39 2024-10-27 02:11:39,818 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
02:11:39 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:39 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:39 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:39 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:39 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:39 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:39 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:39 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:39 Caused by: Ice.CommunicatorDestroyedException: null
02:11:39 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:39 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:39 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:39 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:39 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:39 ... 7 common frames omitted
02:11:47 2024-10-27 02:11:47,323 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
02:11:47 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:47 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:47 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:47 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:47 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:47 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:47 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:47 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:47 Caused by: Ice.CommunicatorDestroyedException: null
02:11:47 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:47 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:47 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:47 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:47 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:47 ... 7 common frames omitted
02:11:48 2024-10-27 02:11:48,185 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
02:11:48 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:48 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:48 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:48 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:48 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:48 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:48 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:48 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:48 Caused by: Ice.CommunicatorDestroyedException: null
02:11:48 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:48 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:48 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:48 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:48 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:48 ... 7 common frames omitted
02:11:54 2024-10-27 02:11:54,725 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
02:11:54 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:54 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:54 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:54 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:54 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:54 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:54 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:54 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:54 Caused by: Ice.CommunicatorDestroyedException: null
02:11:54 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:54 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:54 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:54 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:54 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:54 ... 7 common frames omitted
02:11:55 2024-10-27 02:11:55,560 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
02:11:55 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:55 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:55 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:55 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:55 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:55 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:55 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:55 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:55 Caused by: Ice.CommunicatorDestroyedException: null
02:11:55 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:55 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:55 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:55 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:55 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:55 ... 7 common frames omitted
02:11:58 2024-10-27 02:11:58,954 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
02:11:58 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:58 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:58 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:58 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:58 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:58 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:58 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:58 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:58 Caused by: Ice.CommunicatorDestroyedException: null
02:11:58 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:58 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:58 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:58 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:58 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:58 ... 7 common frames omitted
02:11:59 2024-10-27 02:11:59,850 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
02:11:59 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:11:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:11:59 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:11:59 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:11:59 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:11:59 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:11:59 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:11:59 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:11:59 at java.base/java.lang.Thread.run(Thread.java:829)
02:11:59 Caused by: Ice.CommunicatorDestroyedException: null
02:11:59 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:11:59 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:11:59 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:11:59 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:11:59 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:11:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:11:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:11:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:11:59 ... 7 common frames omitted
02:12:07 2024-10-27 02:12:07,180 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
02:12:07 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:12:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:12:07 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:12:07 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:12:07 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:12:07 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:12:07 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:12:07 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:12:07 at java.base/java.lang.Thread.run(Thread.java:829)
02:12:07 Caused by: Ice.CommunicatorDestroyedException: null
02:12:07 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:12:07 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:12:07 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:12:07 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:12:07 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:12:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:12:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:12:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:12:07 ... 7 common frames omitted
02:12:08 2024-10-27 02:12:08,005 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
02:12:08 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:12:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:12:08 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:12:08 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:12:08 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:12:08 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:12:08 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:12:08 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:12:08 at java.base/java.lang.Thread.run(Thread.java:829)
02:12:08 Caused by: Ice.CommunicatorDestroyedException: null
02:12:08 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:12:08 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:12:08 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:12:08 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:12:08 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:12:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:12:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:12:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:12:08 ... 7 common frames omitted
02:12:19 2024-10-27 02:12:19,799 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
02:12:19 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:12:19 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:12:19 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:12:19 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:12:19 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:12:19 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:12:19 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:12:19 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:12:19 at java.base/java.lang.Thread.run(Thread.java:829)
02:12:19 Caused by: Ice.CommunicatorDestroyedException: null
02:12:19 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:12:19 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:12:19 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:12:19 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:12:19 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:12:19 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:12:19 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:12:19 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:12:19 ... 7 common frames omitted
02:12:20 2024-10-27 02:12:20,621 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
02:12:20 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:12:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:12:20 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:12:20 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:12:20 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:12:20 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:12:20 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:12:20 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:12:20 at java.base/java.lang.Thread.run(Thread.java:829)
02:12:20 Caused by: Ice.CommunicatorDestroyedException: null
02:12:20 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:12:20 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:12:20 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:12:20 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:12:20 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:12:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:12:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:12:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:12:20 ... 7 common frames omitted
02:12:27 2024-10-27 02:12:27,027 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
02:12:27 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:12:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:12:27 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:12:27 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:12:27 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:12:27 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:12:27 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:12:27 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:12:27 at java.base/java.lang.Thread.run(Thread.java:829)
02:12:27 Caused by: Ice.CommunicatorDestroyedException: null
02:12:27 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:12:27 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:12:27 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:12:27 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:12:27 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:12:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:12:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:12:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:12:27 ... 7 common frames omitted
02:12:27 2024-10-27 02:12:27,837 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
02:12:27 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:12:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:12:27 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:12:27 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:12:27 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:12:27 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:12:27 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:12:27 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:12:27 at java.base/java.lang.Thread.run(Thread.java:829)
02:12:27 Caused by: Ice.CommunicatorDestroyedException: null
02:12:27 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:12:27 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:12:27 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:12:27 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:12:27 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:12:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:12:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:12:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:12:27 ... 7 common frames omitted
02:12:35 2024-10-27 02:12:35,507 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
02:12:35 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:12:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:12:35 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:12:35 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:12:35 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:12:35 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:12:35 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:12:35 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:12:35 at java.base/java.lang.Thread.run(Thread.java:829)
02:12:35 Caused by: Ice.CommunicatorDestroyedException: null
02:12:35 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:12:35 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:12:35 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:12:35 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:12:35 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:12:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:12:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:12:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:12:35 ... 7 common frames omitted
02:12:36 2024-10-27 02:12:36,376 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
02:12:36 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:12:36 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:12:36 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:12:36 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:12:36 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:12:36 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:12:36 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:12:36 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:12:36 at java.base/java.lang.Thread.run(Thread.java:829)
02:12:36 Caused by: Ice.CommunicatorDestroyedException: null
02:12:36 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:12:36 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:12:36 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:12:36 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:12:36 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:12:36 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:12:36 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:12:36 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:12:36 ... 7 common frames omitted
02:12:42 2024-10-27 02:12:42,960 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
02:12:42 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:12:42 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:12:42 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:12:42 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:12:42 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:12:42 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:12:42 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:12:42 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:12:42 at java.base/java.lang.Thread.run(Thread.java:829)
02:12:42 Caused by: Ice.CommunicatorDestroyedException: null
02:12:42 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:12:42 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:12:42 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:12:42 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:12:42 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:12:42 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:12:42 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:12:42 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:12:42 ... 7 common frames omitted
02:12:43 2024-10-27 02:12:43,879 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
02:12:43 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:12:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:12:43 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:12:43 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:12:43 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:12:43 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:12:43 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:12:43 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:12:43 at java.base/java.lang.Thread.run(Thread.java:829)
02:12:43 Caused by: Ice.CommunicatorDestroyedException: null
02:12:43 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:12:43 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:12:43 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:12:43 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:12:43 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:12:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:12:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:12:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:12:43 ... 7 common frames omitted
02:12:50 2024-10-27 02:12:50,526 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
02:12:50 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:12:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:12:50 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:12:50 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:12:50 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:12:50 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:12:50 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:12:50 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:12:50 at java.base/java.lang.Thread.run(Thread.java:829)
02:12:50 Caused by: Ice.CommunicatorDestroyedException: null
02:12:50 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:12:50 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:12:50 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:12:50 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:12:50 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:12:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:12:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:12:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:12:50 ... 7 common frames omitted
02:12:51 2024-10-27 02:12:51,368 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
02:12:51 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:12:51 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:12:51 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:12:51 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:12:51 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:12:51 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:12:51 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:12:51 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:12:51 at java.base/java.lang.Thread.run(Thread.java:829)
02:12:51 Caused by: Ice.CommunicatorDestroyedException: null
02:12:51 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:12:51 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:12:51 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:12:51 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:12:51 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:12:51 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:12:51 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:12:51 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:12:51 ... 7 common frames omitted
02:12:55 2024-10-27 02:12:55,148 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
02:12:55 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:12:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:12:55 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:12:55 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:12:55 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:12:55 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:12:55 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:12:55 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:12:55 at java.base/java.lang.Thread.run(Thread.java:829)
02:12:55 Caused by: Ice.CommunicatorDestroyedException: null
02:12:55 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:12:55 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:12:55 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:12:55 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:12:55 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:12:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:12:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:12:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:12:55 ... 7 common frames omitted
02:12:56 2024-10-27 02:12:56,006 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
02:12:56 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:12:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:12:56 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:12:56 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:12:56 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:12:56 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:12:56 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:12:56 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:12:56 at java.base/java.lang.Thread.run(Thread.java:829)
02:12:56 Caused by: Ice.CommunicatorDestroyedException: null
02:12:56 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:12:56 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:12:56 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:12:56 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:12:56 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:12:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:12:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:12:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:12:56 ... 7 common frames omitted
02:13:03 2024-10-27 02:13:03,642 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
02:13:03 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:13:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:13:03 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:13:03 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:13:03 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:13:03 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:13:03 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:13:03 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:13:03 at java.base/java.lang.Thread.run(Thread.java:829)
02:13:03 Caused by: Ice.CommunicatorDestroyedException: null
02:13:03 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:13:03 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:13:03 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:13:03 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:13:03 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:13:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:13:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:13:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:13:03 ... 7 common frames omitted
02:13:04 2024-10-27 02:13:04,461 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
02:13:04 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:13:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:13:04 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:13:04 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:13:04 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:13:04 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:13:04 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:13:04 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:13:04 at java.base/java.lang.Thread.run(Thread.java:829)
02:13:04 Caused by: Ice.CommunicatorDestroyedException: null
02:13:04 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:13:04 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:13:04 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:13:04 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:13:04 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:13:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:13:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:13:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:13:04 ... 7 common frames omitted
02:13:11 2024-10-27 02:13:11,222 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
02:13:11 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:13:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:13:11 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:13:11 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:13:11 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:13:11 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:13:11 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:13:11 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:13:11 at java.base/java.lang.Thread.run(Thread.java:829)
02:13:11 Caused by: Ice.CommunicatorDestroyedException: null
02:13:11 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:13:11 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:13:11 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:13:11 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:13:11 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:13:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:13:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:13:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:13:11 ... 7 common frames omitted
02:13:12 2024-10-27 02:13:12,105 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
02:13:12 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:13:12 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:13:12 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:13:12 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:13:12 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:13:12 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:13:12 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:13:12 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:13:12 at java.base/java.lang.Thread.run(Thread.java:829)
02:13:12 Caused by: Ice.CommunicatorDestroyedException: null
02:13:12 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:13:12 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:13:12 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:13:12 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:13:12 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:13:12 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:13:12 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:13:12 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:13:12 ... 7 common frames omitted
02:13:18 2024-10-27 02:13:18,432 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
02:13:18 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:13:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:13:18 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:13:18 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:13:18 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:13:18 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:13:18 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:13:18 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:13:18 at java.base/java.lang.Thread.run(Thread.java:829)
02:13:18 Caused by: Ice.CommunicatorDestroyedException: null
02:13:18 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:13:18 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:13:18 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:13:18 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:13:18 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:13:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:13:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:13:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:13:18 ... 7 common frames omitted
02:13:19 2024-10-27 02:13:19,249 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
02:13:19 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:13:19 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:13:19 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:13:19 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:13:19 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:13:19 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:13:19 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:13:19 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:13:19 at java.base/java.lang.Thread.run(Thread.java:829)
02:13:19 Caused by: Ice.CommunicatorDestroyedException: null
02:13:19 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:13:19 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:13:19 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:13:19 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:13:19 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:13:19 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:13:19 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:13:19 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:13:19 ... 7 common frames omitted
02:13:22 2024-10-27 02:13:22,484 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
02:13:22 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:13:22 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:13:22 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:13:22 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:13:22 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:13:22 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:13:22 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:13:22 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:13:22 at java.base/java.lang.Thread.run(Thread.java:829)
02:13:22 Caused by: Ice.CommunicatorDestroyedException: null
02:13:22 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:13:22 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:13:22 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:13:22 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:13:22 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:13:22 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:13:22 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:13:22 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:13:22 ... 7 common frames omitted
02:13:23 2024-10-27 02:13:23,341 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
02:13:23 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:13:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:13:23 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:13:23 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:13:23 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:13:23 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:13:23 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:13:23 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:13:23 at java.base/java.lang.Thread.run(Thread.java:829)
02:13:23 Caused by: Ice.CommunicatorDestroyedException: null
02:13:23 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:13:23 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:13:23 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:13:23 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:13:23 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:13:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:13:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:13:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:13:23 ... 7 common frames omitted
02:13:26 2024-10-27 02:13:26,690 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
02:13:26 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:13:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:13:26 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:13:26 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:13:26 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:13:26 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:13:26 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:13:26 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:13:26 at java.base/java.lang.Thread.run(Thread.java:829)
02:13:26 Caused by: Ice.CommunicatorDestroyedException: null
02:13:26 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:13:26 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:13:26 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:13:26 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:13:26 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:13:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:13:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:13:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:13:26 ... 7 common frames omitted
02:13:27 2024-10-27 02:13:27,521 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
02:13:27 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:13:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:13:27 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:13:27 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:13:27 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:13:27 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:13:27 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:13:27 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:13:27 at java.base/java.lang.Thread.run(Thread.java:829)
02:13:27 Caused by: Ice.CommunicatorDestroyedException: null
02:13:27 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:13:27 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:13:27 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:13:27 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:13:27 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:13:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:13:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:13:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:13:27 ... 7 common frames omitted
02:13:30 2024-10-27 02:13:30,787 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
02:13:30 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:13:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:13:30 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:13:30 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:13:30 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:13:30 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:13:30 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:13:30 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:13:30 at java.base/java.lang.Thread.run(Thread.java:829)
02:13:30 Caused by: Ice.CommunicatorDestroyedException: null
02:13:30 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:13:30 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:13:30 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:13:30 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:13:30 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:13:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:13:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:13:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:13:30 ... 7 common frames omitted
02:13:31 2024-10-27 02:13:31,616 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
02:13:31 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:13:31 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:13:31 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:13:31 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:13:31 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:13:31 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:13:31 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:13:31 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:13:31 at java.base/java.lang.Thread.run(Thread.java:829)
02:13:31 Caused by: Ice.CommunicatorDestroyedException: null
02:13:31 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:13:31 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:13:31 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:13:31 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:13:31 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:13:31 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:13:31 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:13:31 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:13:31 ... 7 common frames omitted
02:13:39 2024-10-27 02:13:39,200 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
02:13:39 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:13:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:13:39 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:13:39 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:13:39 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:13:39 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:13:39 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:13:39 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:13:39 at java.base/java.lang.Thread.run(Thread.java:829)
02:13:39 Caused by: Ice.CommunicatorDestroyedException: null
02:13:39 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:13:39 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:13:39 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:13:39 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:13:39 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:13:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:13:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:13:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:13:39 ... 7 common frames omitted
02:13:40 2024-10-27 02:13:40,177 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
02:13:40 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:13:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:13:40 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:13:40 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:13:40 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:13:40 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:13:40 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:13:40 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:13:40 at java.base/java.lang.Thread.run(Thread.java:829)
02:13:40 Caused by: Ice.CommunicatorDestroyedException: null
02:13:40 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:13:40 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:13:40 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:13:40 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:13:40 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:13:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:13:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:13:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:13:40 ... 7 common frames omitted
02:13:46 2024-10-27 02:13:46,744 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
02:13:46 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:13:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:13:46 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:13:46 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:13:46 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:13:46 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:13:46 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:13:46 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:13:46 at java.base/java.lang.Thread.run(Thread.java:829)
02:13:46 Caused by: Ice.CommunicatorDestroyedException: null
02:13:46 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:13:46 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:13:46 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:13:46 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:13:46 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:13:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:13:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:13:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:13:46 ... 7 common frames omitted
02:13:47 2024-10-27 02:13:47,643 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
02:13:47 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:13:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:13:47 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:13:47 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:13:47 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:13:47 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:13:47 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:13:47 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:13:47 at java.base/java.lang.Thread.run(Thread.java:829)
02:13:47 Caused by: Ice.CommunicatorDestroyedException: null
02:13:47 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:13:47 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:13:47 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:13:47 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:13:47 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:13:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:13:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:13:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:13:47 ... 7 common frames omitted
02:13:55 2024-10-27 02:13:55,410 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
02:13:55 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:13:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:13:55 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:13:55 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:13:55 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:13:55 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:13:55 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:13:55 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:13:55 at java.base/java.lang.Thread.run(Thread.java:829)
02:13:55 Caused by: Ice.CommunicatorDestroyedException: null
02:13:55 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:13:55 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:13:55 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:13:55 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:13:55 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:13:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:13:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:13:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:13:55 ... 7 common frames omitted
02:13:56 2024-10-27 02:13:56,317 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
02:13:56 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:13:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:13:56 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:13:56 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:13:56 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:13:56 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:13:56 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:13:56 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:13:56 at java.base/java.lang.Thread.run(Thread.java:829)
02:13:56 Caused by: Ice.CommunicatorDestroyedException: null
02:13:56 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:13:56 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:13:56 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:13:56 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:13:56 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:13:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:13:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:13:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:13:56 ... 7 common frames omitted
02:14:02 2024-10-27 02:14:02,866 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
02:14:02 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:14:02 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:14:02 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:14:02 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:14:02 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:14:02 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:14:02 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:14:02 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:14:02 at java.base/java.lang.Thread.run(Thread.java:829)
02:14:02 Caused by: Ice.CommunicatorDestroyedException: null
02:14:02 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:14:02 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:14:02 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:14:02 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:14:02 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:14:02 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:14:02 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:14:02 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:14:02 ... 7 common frames omitted
02:14:03 2024-10-27 02:14:03,688 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
02:14:03 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:14:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:14:03 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:14:03 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:14:03 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:14:03 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:14:03 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:14:03 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:14:03 at java.base/java.lang.Thread.run(Thread.java:829)
02:14:03 Caused by: Ice.CommunicatorDestroyedException: null
02:14:03 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:14:03 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:14:03 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:14:03 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:14:03 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:14:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:14:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:14:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:14:03 ... 7 common frames omitted
02:14:07 2024-10-27 02:14:07,159 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
02:14:07 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:14:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:14:07 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:14:07 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:14:07 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:14:07 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:14:07 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:14:07 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:14:07 at java.base/java.lang.Thread.run(Thread.java:829)
02:14:07 Caused by: Ice.CommunicatorDestroyedException: null
02:14:07 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:14:07 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:14:07 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:14:07 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:14:07 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:14:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:14:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:14:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:14:07 ... 7 common frames omitted
02:14:07 2024-10-27 02:14:07,988 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
02:14:07 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:14:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:14:07 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:14:07 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:14:07 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:14:07 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:14:07 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:14:07 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:14:07 at java.base/java.lang.Thread.run(Thread.java:829)
02:14:07 Caused by: Ice.CommunicatorDestroyedException: null
02:14:07 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:14:07 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:14:07 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:14:07 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:14:07 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:14:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:14:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:14:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:14:07 ... 7 common frames omitted
02:14:15 2024-10-27 02:14:15,481 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
02:14:15 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:14:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:14:15 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:14:15 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:14:15 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:14:15 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:14:15 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:14:15 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:14:15 at java.base/java.lang.Thread.run(Thread.java:829)
02:14:15 Caused by: Ice.CommunicatorDestroyedException: null
02:14:15 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:14:15 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:14:15 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:14:15 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:14:15 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:14:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:14:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:14:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:14:15 ... 7 common frames omitted
02:14:16 2024-10-27 02:14:16,400 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
02:14:16 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:14:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:14:16 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:14:16 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:14:16 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:14:16 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:14:16 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:14:16 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:14:16 at java.base/java.lang.Thread.run(Thread.java:829)
02:14:16 Caused by: Ice.CommunicatorDestroyedException: null
02:14:16 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:14:16 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:14:16 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:14:16 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:14:16 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:14:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:14:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:14:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:14:16 ... 7 common frames omitted
02:14:23 2024-10-27 02:14:23,044 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
02:14:23 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:14:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:14:23 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:14:23 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:14:23 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:14:23 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:14:23 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:14:23 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:14:23 at java.base/java.lang.Thread.run(Thread.java:829)
02:14:23 Caused by: Ice.CommunicatorDestroyedException: null
02:14:23 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:14:23 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:14:23 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:14:23 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:14:23 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:14:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:14:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:14:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:14:23 ... 7 common frames omitted
02:14:23 2024-10-27 02:14:23,886 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
02:14:23 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:14:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:14:23 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:14:23 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:14:23 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:14:23 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:14:23 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:14:23 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:14:23 at java.base/java.lang.Thread.run(Thread.java:829)
02:14:23 Caused by: Ice.CommunicatorDestroyedException: null
02:14:23 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:14:23 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:14:23 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:14:23 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:14:23 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:14:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:14:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:14:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:14:23 ... 7 common frames omitted
02:14:31 2024-10-27 02:14:31,339 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
02:14:31 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:14:31 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:14:31 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:14:31 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:14:31 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:14:31 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:14:31 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:14:31 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:14:31 at java.base/java.lang.Thread.run(Thread.java:829)
02:14:31 Caused by: Ice.CommunicatorDestroyedException: null
02:14:31 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:14:31 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:14:31 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:14:31 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:14:31 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:14:31 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:14:31 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:14:31 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:14:31 ... 7 common frames omitted
02:14:32 2024-10-27 02:14:32,212 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
02:14:32 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:14:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:14:32 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:14:32 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:14:32 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:14:32 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:14:32 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:14:32 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:14:32 at java.base/java.lang.Thread.run(Thread.java:829)
02:14:32 Caused by: Ice.CommunicatorDestroyedException: null
02:14:32 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:14:32 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:14:32 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:14:32 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:14:32 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:14:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:14:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:14:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:14:32 ... 7 common frames omitted
02:14:38 2024-10-27 02:14:38,666 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
02:14:38 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:14:38 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:14:38 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:14:38 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:14:38 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:14:38 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:14:38 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:14:38 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:14:38 at java.base/java.lang.Thread.run(Thread.java:829)
02:14:38 Caused by: Ice.CommunicatorDestroyedException: null
02:14:38 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:14:38 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:14:38 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:14:38 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:14:38 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:14:38 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:14:38 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:14:38 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:14:38 ... 7 common frames omitted
02:14:39 2024-10-27 02:14:39,566 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out:
02:14:39 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:14:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:14:39 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:14:39 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:14:39 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:14:39 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:14:39 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:14:39 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:14:39 at java.base/java.lang.Thread.run(Thread.java:829)
02:14:39 Caused by: Ice.CommunicatorDestroyedException: null
02:14:39 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:14:39 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:14:39 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:14:39 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:14:39 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:14:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:14:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:14:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:14:39 ... 7 common frames omitted
02:14:42 2024-10-27 02:14:42,985 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
02:14:42 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:14:42 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:14:42 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:14:42 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:14:42 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:14:42 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:14:42 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:14:42 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:14:42 at java.base/java.lang.Thread.run(Thread.java:829)
02:14:42 Caused by: Ice.CommunicatorDestroyedException: null
02:14:42 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:14:42 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:14:42 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:14:42 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:14:42 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:14:42 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:14:42 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:14:42 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:14:42 ... 7 common frames omitted
02:14:43 2024-10-27 02:14:43,816 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out:
02:14:43 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:14:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:14:43 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:14:43 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:14:43 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:14:43 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:14:43 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:14:43 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:14:43 at java.base/java.lang.Thread.run(Thread.java:829)
02:14:43 Caused by: Ice.CommunicatorDestroyedException: null
02:14:43 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:14:43 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:14:43 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:14:43 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:14:43 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:14:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:14:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:14:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:14:43 ... 7 common frames omitted
02:14:51 2024-10-27 02:14:51,415 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
02:14:51 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:14:51 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:14:51 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:14:51 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:14:51 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:14:51 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:14:51 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:14:51 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:14:51 at java.base/java.lang.Thread.run(Thread.java:829)
02:14:51 Caused by: Ice.CommunicatorDestroyedException: null
02:14:51 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:14:51 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:14:51 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:14:51 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:14:51 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:14:51 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:14:51 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:14:51 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:14:51 ... 7 common frames omitted
02:14:52 2024-10-27 02:14:52,275 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out:
02:14:52 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:14:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:14:52 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:14:52 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:14:52 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:14:52 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:14:52 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:14:52 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:14:52 at java.base/java.lang.Thread.run(Thread.java:829)
02:14:52 Caused by: Ice.CommunicatorDestroyedException: null
02:14:52 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:14:52 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:14:52 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:14:52 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:14:52 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:14:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:14:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:14:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:14:52 ... 7 common frames omitted
02:14:58 2024-10-27 02:14:58,962 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
02:14:58 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:14:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:14:58 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:14:58 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:14:58 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:14:58 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:14:58 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:14:58 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:14:58 at java.base/java.lang.Thread.run(Thread.java:829)
02:14:58 Caused by: Ice.CommunicatorDestroyedException: null
02:14:58 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:14:58 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:14:58 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:14:58 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:14:58 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:14:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:14:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:14:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:14:58 ... 7 common frames omitted
02:14:59 2024-10-27 02:14:59,804 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out:
02:14:59 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:14:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:14:59 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:14:59 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:14:59 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:14:59 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:14:59 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:14:59 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:14:59 at java.base/java.lang.Thread.run(Thread.java:829)
02:14:59 Caused by: Ice.CommunicatorDestroyedException: null
02:14:59 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:14:59 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:14:59 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:14:59 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:14:59 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:14:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:14:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:14:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:14:59 ... 7 common frames omitted
02:15:07 2024-10-27 02:15:07,369 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out:
02:15:07 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:15:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:15:07 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:15:07 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:15:07 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:15:07 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:15:07 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:15:07 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:15:07 at java.base/java.lang.Thread.run(Thread.java:829)
02:15:07 Caused by: Ice.CommunicatorDestroyedException: null
02:15:07 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:15:07 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:15:07 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:15:07 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:15:07 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:15:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:15:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:15:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:15:07 ... 7 common frames omitted
02:15:08 2024-10-27 02:15:08,209 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out:
02:15:08 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:15:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:15:08 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:15:08 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:15:08 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:15:08 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:15:08 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:15:08 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:15:08 at java.base/java.lang.Thread.run(Thread.java:829)
02:15:08 Caused by: Ice.CommunicatorDestroyedException: null
02:15:08 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:15:08 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:15:08 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:15:08 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:15:08 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:15:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:15:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:15:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:15:08 ... 7 common frames omitted
02:15:14 2024-10-27 02:15:14,820 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out:
02:15:14 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:15:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:15:14 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:15:14 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:15:14 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:15:14 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:15:14 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:15:14 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:15:14 at java.base/java.lang.Thread.run(Thread.java:829)
02:15:14 Caused by: Ice.CommunicatorDestroyedException: null
02:15:14 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:15:14 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:15:14 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:15:14 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:15:14 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:15:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:15:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:15:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:15:14 ... 7 common frames omitted
02:15:15 2024-10-27 02:15:15,709 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out:
02:15:15 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:15:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:15:15 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:15:15 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:15:15 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:15:15 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:15:15 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:15:15 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:15:15 at java.base/java.lang.Thread.run(Thread.java:829)
02:15:15 Caused by: Ice.CommunicatorDestroyedException: null
02:15:15 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:15:15 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:15:15 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:15:15 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:15:15 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:15:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:15:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:15:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:15:15 ... 7 common frames omitted
02:15:23 2024-10-27 02:15:23,306 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out:
02:15:23 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:15:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:15:23 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:15:23 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:15:23 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:15:23 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:15:23 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:15:23 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:15:23 at java.base/java.lang.Thread.run(Thread.java:829)
02:15:23 Caused by: Ice.CommunicatorDestroyedException: null
02:15:23 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:15:23 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:15:23 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:15:23 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:15:23 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:15:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:15:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:15:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:15:23 ... 7 common frames omitted
02:15:24 2024-10-27 02:15:24,136 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out:
02:15:24 java.lang.RuntimeException: Ice.CommunicatorDestroyedException
02:15:24 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845)
02:15:24 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77)
02:15:24 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
02:15:24 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305)
02:15:24 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305)
02:15:24 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
02:15:24 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
02:15:24 at java.base/java.lang.Thread.run(Thread.java:829)
02:15:24 Caused by: Ice.CommunicatorDestroyedException: null
02:15:24 at IceInternal.Instance.proxyFactory(Instance.java:239)
02:15:24 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142)
02:15:24 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114)
02:15:24 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37)
02:15:24 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946)
02:15:24 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846)
02:15:24 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833)
02:15:24 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838)
02:15:24 ... 7 common frames omitted
02:15:26 ===============================================
02:15:26 OmeroJava.integration
02:15:26 Total tests run: 2589, Passes: 2588, Failures: 1, Skips: 0
02:15:26 ===============================================
02:15:28 The tests failed.
02:15:28
02:15:28 BUILD SUCCESSFUL
02:15:28 Total time: 65 minutes 16 seconds
02:15:28 + /home/omero/workspace/OMERO-test-integration/src/build.py -f components/tools/OmeroPy/build.xml integration -Dtestreports.dir=target/reports/integration
02:15:29 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
02:15:30 Buildfile: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/build.xml
02:15:31 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy...
02:15:31 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy...
02:15:31
02:15:31 python-integration:
02:15:31 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/target/reports/integration
02:15:36 ============================= test session starts ==============================
02:15:36 platform linux -- Python 3.9.18, pytest-8.3.3, pluggy-1.5.0 -- /home/omero/workspace/OMERO-test-integration/.venv3/bin/python3
02:15:36 cachedir: .pytest_cache
02:15:36 django: version: 4.2.16, settings: omeroweb.settings (from ini)
02:15:36 rootdir: /home/omero/workspace/OMERO-test-integration/src/components/tools
02:15:36 configfile: pytest.ini
02:15:36 plugins: xdist-3.6.1, mock-3.14.0, django-4.9.0
02:15:43 collecting ... collected 2061 items / 36 deselected / 2025 selected
02:15:52 test/integration/clitest/test_admin.py::TestAdmin::test_checkupgrade0 FAILED [ 0%]
02:15:58 test/integration/clitest/test_admin.py::TestAdmin::test_checkupgrade1 FAILED [ 0%]
02:16:01 test/integration/clitest/test_admin.py::TestAdmin::test_log PASSED [ 0%]
02:16:04 test/integration/clitest/test_admin.py::TestAdminRestrictedAdmin::test_log PASSED [ 0%]
02:16:10 test/integration/clitest/test_admin.py::TestAdminRestrictedAdmin::test_checkupgrade0 FAILED [ 0%]
02:16:16 test/integration/clitest/test_admin.py::TestAdminRestrictedAdmin::test_checkupgrade1 FAILED [ 0%]
02:16:18 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rw-----Image] PASSED [ 0%]
02:16:18 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rw-----Dataset] PASSED [ 0%]
02:16:18 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rw-----Project] PASSED [ 0%]
02:16:18 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rw-----Plate] PASSED [ 0%]
02:16:18 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rw-----Screen] PASSED [ 0%]
02:16:19 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rwr----Image] PASSED [ 0%]
02:16:19 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rwr----Dataset] PASSED [ 0%]
02:16:19 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rwr----Project] PASSED [ 0%]
02:16:19 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rwr----Plate] PASSED [ 0%]
02:16:19 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rwr----Screen] PASSED [ 0%]
02:16:19 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rwra---Image] PASSED [ 0%]
02:16:19 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rwra---Dataset] PASSED [ 0%]
02:16:19 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rwra---Project] PASSED [ 0%]
02:16:19 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rwra---Plate] PASSED [ 0%]
02:16:19 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rwra---Screen] PASSED [ 1%]
02:16:19 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rwrw---Image] PASSED [ 1%]
02:16:19 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rwrw---Dataset] PASSED [ 1%]
02:16:19 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rwrw---Project] PASSED [ 1%]
02:16:19 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rwrw---Plate] PASSED [ 1%]
02:16:19 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rwrw---Screen] PASSED [ 1%]
02:16:20 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[Group:-rw-----Image] PASSED [ 1%]
02:16:20 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[Group:-rw-----Dataset] PASSED [ 1%]
02:16:20 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[Group:-rw-----Project] PASSED [ 1%]
02:16:20 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[Group:-rw-----Plate] PASSED [ 1%]
02:16:20 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[Group:-rw-----Screen] PASSED [ 1%]
02:16:20 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[Group:-rwr----Image] PASSED [ 1%]
02:16:20 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[Group:-rwr----Dataset] PASSED [ 1%]
02:16:20 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[Group:-rwr----Project] PASSED [ 1%]
02:16:20 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[Group:-rwr----Plate] PASSED [ 1%]
02:16:20 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[Group:-rwr----Screen] PASSED [ 1%]
02:16:20 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[Group:-rwra---Image] PASSED [ 1%]
02:16:20 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[Group:-rwra---Dataset] PASSED [ 1%]
02:16:20 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[Group:-rwra---Project] PASSED [ 1%]
02:16:20 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[Group:-rwra---Plate] PASSED [ 1%]
02:16:20 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[Group:-rwra---Screen] PASSED [ 2%]
02:16:21 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[Group:-rwrw---Image] PASSED [ 2%]
02:16:21 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[Group:-rwrw---Dataset] PASSED [ 2%]
02:16:21 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[Group:-rwrw---Project] PASSED [ 2%]
02:16:21 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[Group:-rwrw---Plate] PASSED [ 2%]
02:16:21 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[Group:-rwrw---Screen] PASSED [ 2%]
02:16:21 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[ExperimenterGroup:-rw-----Image] PASSED [ 2%]
02:16:21 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[ExperimenterGroup:-rw-----Dataset] PASSED [ 2%]
02:16:21 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[ExperimenterGroup:-rw-----Project] PASSED [ 2%]
02:16:21 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[ExperimenterGroup:-rw-----Plate] PASSED [ 2%]
02:16:21 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[ExperimenterGroup:-rw-----Screen] PASSED [ 2%]
02:16:21 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[ExperimenterGroup:-rwr----Image] PASSED [ 2%]
02:16:21 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[ExperimenterGroup:-rwr----Dataset] PASSED [ 2%]
02:16:21 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[ExperimenterGroup:-rwr----Project] PASSED [ 2%]
02:16:21 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[ExperimenterGroup:-rwr----Plate] PASSED [ 2%]
02:16:21 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[ExperimenterGroup:-rwr----Screen] PASSED [ 2%]
02:16:22 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[ExperimenterGroup:-rwra---Image] PASSED [ 2%]
02:16:22 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[ExperimenterGroup:-rwra---Dataset] PASSED [ 2%]
02:16:22 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[ExperimenterGroup:-rwra---Project] PASSED [ 2%]
02:16:22 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[ExperimenterGroup:-rwra---Plate] PASSED [ 2%]
02:16:22 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[ExperimenterGroup:-rwra---Screen] PASSED [ 3%]
02:16:22 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[ExperimenterGroup:-rwrw---Image] PASSED [ 3%]
02:16:22 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[ExperimenterGroup:-rwrw---Dataset] PASSED [ 3%]
02:16:22 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[ExperimenterGroup:-rwrw---Project] PASSED [ 3%]
02:16:22 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[ExperimenterGroup:-rwrw---Plate] PASSED [ 3%]
02:16:22 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[ExperimenterGroup:-rwrw---Screen] PASSED [ 3%]
02:16:22 test/integration/clitest/test_chgrp.py::TestChgrp::testNonMember PASSED [ 3%]
02:16:22 test/integration/clitest/test_chgrp.py::TestChgrp::testGroupName PASSED [ 3%]
02:16:28 test/integration/clitest/test_chgrp.py::TestChgrp::testFileset PASSED [ 3%]
02:16:31 test/integration/clitest/test_chgrp.py::TestChgrp::testFilesetPartialFailing PASSED [ 3%]
02:16:35 test/integration/clitest/test_chgrp.py::TestChgrp::testFilesetOneImage PASSED [ 3%]
02:16:39 test/integration/clitest/test_chgrp.py::TestChgrp::testFilesetAllImagesMoveImages PASSED [ 3%]
02:16:42 test/integration/clitest/test_chgrp.py::TestChgrp::testFilesetAllImagesMoveDataset PASSED [ 3%]
02:16:42 test/integration/clitest/test_chgrp.py::TestChgrp::testNonExistingGroupId[] PASSED [ 3%]
02:16:42 test/integration/clitest/test_chgrp.py::TestChgrp::testNonExistingGroupId[Group:] PASSED [ 3%]
02:16:42 test/integration/clitest/test_chgrp.py::TestChgrp::testNonExistingGroupId[ExperimenterGroup:] PASSED [ 3%]
02:16:42 test/integration/clitest/test_chgrp.py::TestChgrp::testNonExistingGroupName PASSED [ 3%]
02:16:42 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSimpleObjectsSameClass[True-1] PASSED [ 3%]
02:16:43 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSimpleObjectsSameClass[True-2] PASSED [ 3%]
02:16:43 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSimpleObjectsSameClass[True-3] PASSED [ 3%]
02:16:43 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSimpleObjectsSameClass[False-1] PASSED [ 4%]
02:16:43 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSimpleObjectsSameClass[False-2] PASSED [ 4%]
02:16:43 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSimpleObjectsSameClass[False-3] PASSED [ 4%]
02:16:43 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSimpleObjectsTwoClassesSeparated[True-1] PASSED [ 4%]
02:16:43 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSimpleObjectsTwoClassesSeparated[True-2] PASSED [ 4%]
02:16:44 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSimpleObjectsTwoClassesSeparated[True-3] PASSED [ 4%]
02:16:44 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSimpleObjectsTwoClassesSeparated[False-1] PASSED [ 4%]
02:16:44 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSimpleObjectsTwoClassesSeparated[False-2] PASSED [ 4%]
02:16:44 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSimpleObjectsTwoClassesSeparated[False-3] PASSED [ 4%]
02:16:44 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSimpleObjectsTwoClassesInterlaced[True-1] PASSED [ 4%]
02:16:44 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSimpleObjectsTwoClassesInterlaced[True-2] PASSED [ 4%]
02:16:44 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSimpleObjectsTwoClassesInterlaced[True-3] PASSED [ 4%]
02:16:45 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSimpleObjectsTwoClassesInterlaced[False-1] PASSED [ 4%]
02:16:45 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSimpleObjectsTwoClassesInterlaced[False-2] PASSED [ 4%]
02:16:45 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSimpleObjectsTwoClassesInterlaced[False-3] PASSED [ 4%]
02:16:45 test/integration/clitest/test_chgrp.py::TestChgrp::testBasicSkipheadBothForms[True-1-/Dataset] PASSED [ 4%]
02:16:45 test/integration/clitest/test_chgrp.py::TestChgrp::testBasicSkipheadBothForms[True-1-] PASSED [ 4%]
02:16:45 test/integration/clitest/test_chgrp.py::TestChgrp::testBasicSkipheadBothForms[True-2-/Dataset] PASSED [ 4%]
02:16:46 test/integration/clitest/test_chgrp.py::TestChgrp::testBasicSkipheadBothForms[True-2-] PASSED [ 4%]
02:16:46 test/integration/clitest/test_chgrp.py::TestChgrp::testBasicSkipheadBothForms[False-1-/Dataset] PASSED [ 4%]
02:16:46 test/integration/clitest/test_chgrp.py::TestChgrp::testBasicSkipheadBothForms[False-1-] PASSED [ 4%]
02:16:46 test/integration/clitest/test_chgrp.py::TestChgrp::testBasicSkipheadBothForms[False-2-/Dataset] PASSED [ 5%]
02:16:46 test/integration/clitest/test_chgrp.py::TestChgrp::testBasicSkipheadBothForms[False-2-] PASSED [ 5%]
02:16:47 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSkipheadsSameClass[True-1] PASSED [ 5%]
02:16:47 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSkipheadsSameClass[True-2] PASSED [ 5%]
02:16:47 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSkipheadsSameClass[True-3] PASSED [ 5%]
02:16:48 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSkipheadsSameClass[False-1] PASSED [ 5%]
02:16:48 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSkipheadsSameClass[False-2] PASSED [ 5%]
02:16:48 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSkipheadsSameClass[False-3] PASSED [ 5%]
02:16:48 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSkipheadsPlusObjectsSeparated[True-1] PASSED [ 5%]
02:16:49 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSkipheadsPlusObjectsSeparated[True-2] PASSED [ 5%]
02:16:49 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSkipheadsPlusObjectsSeparated[True-3] PASSED [ 5%]
02:16:50 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSkipheadsPlusObjectsSeparated[False-1] PASSED [ 5%]
02:16:50 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSkipheadsPlusObjectsSeparated[False-2] PASSED [ 5%]
02:16:50 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSkipheadsPlusObjectsSeparated[False-3] PASSED [ 5%]
02:16:50 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSkipheadsPlusObjectsInterlaced[True-1] PASSED [ 5%]
02:16:51 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSkipheadsPlusObjectsInterlaced[True-2] PASSED [ 5%]
02:16:51 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSkipheadsPlusObjectsInterlaced[True-3] PASSED [ 5%]
02:16:51 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSkipheadsPlusObjectsInterlaced[False-1] PASSED [ 5%]
02:16:52 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSkipheadsPlusObjectsInterlaced[False-2] PASSED [ 5%]
02:16:52 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSkipheadsPlusObjectsInterlaced[False-3] PASSED [ 5%]
02:16:55 test/integration/clitest/test_chgrp.py::TestChgrpRoot::testNonMember PASSED [ 6%]
02:16:58 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[-Image] PASSED [ 6%]
02:17:00 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[-Dataset] PASSED [ 6%]
02:17:02 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[-Project] PASSED [ 6%]
02:17:04 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[-Plate] PASSED [ 6%]
02:17:06 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[-Screen] PASSED [ 6%]
02:17:08 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[User:-Image] PASSED [ 6%]
02:17:10 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[User:-Dataset] PASSED [ 6%]
02:17:12 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[User:-Project] PASSED [ 6%]
02:17:14 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[User:-Plate] PASSED [ 6%]
02:17:16 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[User:-Screen] PASSED [ 6%]
02:17:17 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[Experimenter:-Image] PASSED [ 6%]
02:17:20 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[Experimenter:-Dataset] PASSED [ 6%]
02:17:21 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[Experimenter:-Project] PASSED [ 6%]
02:17:23 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[Experimenter:-Plate] PASSED [ 6%]
02:17:25 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[Experimenter:-Screen] PASSED [ 6%]
02:17:29 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageTargetUser PASSED [ 6%]
02:17:31 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithName[-] PASSED [ 6%]
02:17:33 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithName[-/] PASSED [ 6%]
02:17:35 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithName[I-] PASSED [ 6%]
02:17:37 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithName[I-/] PASSED [ 7%]
02:17:39 test/integration/clitest/test_chown.py::TestChown::testChownDifferentGroup PASSED [ 7%]
02:17:45 test/integration/clitest/test_chown.py::TestChown::testFileset[image-1] PASSED [ 7%]
02:17:50 test/integration/clitest/test_chown.py::TestChown::testFileset[image-2] PASSED [ 7%]
02:17:56 test/integration/clitest/test_chown.py::TestChown::testFileset[fileset-1] PASSED [ 7%]
02:18:01 test/integration/clitest/test_chown.py::TestChown::testFileset[fileset-2] PASSED [ 7%]
02:18:07 test/integration/clitest/test_chown.py::TestChown::testFilesetPartialFailing PASSED [ 7%]
02:18:13 test/integration/clitest/test_chown.py::TestChown::testFilesetAllImagesChownDataset PASSED [ 7%]
02:18:15 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsSameClass[True-1] PASSED [ 7%]
02:18:16 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsSameClass[True-2] PASSED [ 7%]
02:18:18 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsSameClass[True-3] PASSED [ 7%]
02:18:20 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsSameClass[False-1] PASSED [ 7%]
02:18:22 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsSameClass[False-2] PASSED [ 7%]
02:18:24 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsSameClass[False-3] PASSED [ 7%]
02:18:27 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsTwoClassesSeparated[True-1] PASSED [ 7%]
02:18:29 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsTwoClassesSeparated[True-2] PASSED [ 7%]
02:18:31 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsTwoClassesSeparated[True-3] PASSED [ 7%]
02:18:33 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsTwoClassesSeparated[False-1] PASSED [ 7%]
02:18:35 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsTwoClassesSeparated[False-2] PASSED [ 7%]
02:18:37 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsTwoClassesSeparated[False-3] PASSED [ 7%]
02:18:39 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsTwoClassesInterlaced[True-1] PASSED [ 8%]
02:18:41 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsTwoClassesInterlaced[True-2] PASSED [ 8%]
02:18:43 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsTwoClassesInterlaced[True-3] PASSED [ 8%]
02:18:45 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsTwoClassesInterlaced[False-1] PASSED [ 8%]
02:18:47 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsTwoClassesInterlaced[False-2] PASSED [ 8%]
02:18:49 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsTwoClassesInterlaced[False-3] PASSED [ 8%]
02:18:52 test/integration/clitest/test_chown.py::TestChown::testBasicSkipheadBothForms[True-1-/Dataset] PASSED [ 8%]
02:18:54 test/integration/clitest/test_chown.py::TestChown::testBasicSkipheadBothForms[True-1-] PASSED [ 8%]
02:18:56 test/integration/clitest/test_chown.py::TestChown::testBasicSkipheadBothForms[True-2-/Dataset] PASSED [ 8%]
02:18:58 test/integration/clitest/test_chown.py::TestChown::testBasicSkipheadBothForms[True-2-] PASSED [ 8%]
02:19:00 test/integration/clitest/test_chown.py::TestChown::testBasicSkipheadBothForms[False-1-/Dataset] PASSED [ 8%]
02:19:03 test/integration/clitest/test_chown.py::TestChown::testBasicSkipheadBothForms[False-1-] PASSED [ 8%]
02:19:05 test/integration/clitest/test_chown.py::TestChown::testBasicSkipheadBothForms[False-2-/Dataset] PASSED [ 8%]
02:19:07 test/integration/clitest/test_chown.py::TestChown::testBasicSkipheadBothForms[False-2-] PASSED [ 8%]
02:19:09 test/integration/clitest/test_chown.py::TestChown::testMultipleSkipheadsPlusObjectsSeparated[True-1] PASSED [ 8%]
02:19:12 test/integration/clitest/test_chown.py::TestChown::testMultipleSkipheadsPlusObjectsSeparated[True-2] PASSED [ 8%]
02:19:15 test/integration/clitest/test_chown.py::TestChown::testMultipleSkipheadsPlusObjectsSeparated[True-3] PASSED [ 8%]
02:19:17 test/integration/clitest/test_chown.py::TestChown::testMultipleSkipheadsPlusObjectsSeparated[False-1] PASSED [ 8%]
02:19:20 test/integration/clitest/test_chown.py::TestChown::testMultipleSkipheadsPlusObjectsSeparated[False-2] PASSED [ 8%]
02:19:23 test/integration/clitest/test_chown.py::TestChown::testMultipleSkipheadsPlusObjectsSeparated[False-3] PASSED [ 8%]
02:19:25 test/integration/clitest/test_chown.py::TestChown::testMultipleSkipheadsPlusObjectsInterlaced[True-1] PASSED [ 8%]
02:19:28 test/integration/clitest/test_chown.py::TestChown::testMultipleSkipheadsPlusObjectsInterlaced[True-2] PASSED [ 9%]
02:19:31 test/integration/clitest/test_chown.py::TestChown::testMultipleSkipheadsPlusObjectsInterlaced[True-3] PASSED [ 9%]
02:19:33 test/integration/clitest/test_chown.py::TestChown::testMultipleSkipheadsPlusObjectsInterlaced[False-1] PASSED [ 9%]
02:19:36 test/integration/clitest/test_chown.py::TestChown::testMultipleSkipheadsPlusObjectsInterlaced[False-2] PASSED [ 9%]
02:19:39 test/integration/clitest/test_chown.py::TestChown::testMultipleSkipheadsPlusObjectsInterlaced[False-3] PASSED [ 9%]
02:19:41 test/integration/clitest/test_chown.py::TestChown::testDryRun PASSED [ 9%]
02:19:43 test/integration/clitest/test_chown.py::TestChown::testExcludeNone PASSED [ 9%]
02:19:45 test/integration/clitest/test_chown.py::TestChown::testExcludeDataset PASSED [ 9%]
02:19:47 test/integration/clitest/test_chown.py::TestChown::testExcludeImage PASSED [ 9%]
02:19:50 test/integration/clitest/test_chown.py::TestChown::testExcludeOverridesInclude PASSED [ 9%]
02:19:52 test/integration/clitest/test_chown.py::TestChown::testSeparateAnnotationTransfer PASSED [ 9%]
02:19:54 test/integration/clitest/test_chown.py::TestChown::testOutputWithElision PASSED [ 9%]
02:19:59 test/integration/clitest/test_chown.py::TestTagChown::testChownOneTagSetWithUniqueTags PASSED [ 9%]
02:20:03 test/integration/clitest/test_chown.py::TestChownRoot::testChownBasicUsageWithId PASSED [ 9%]
02:20:07 test/integration/clitest/test_chown.py::TestChownNonGroupOwner::testChownBasicUsageWithId PASSED [ 9%]
02:20:09 test/integration/clitest/test_cleanse.py::TestCleanse::testCleanseAdminOnly PASSED [ 9%]
02:20:22 test/integration/clitest/test_cleanse.py::TestCleanseFullAdmin::testCleanseBasic PASSED [ 9%]
02:20:43 test/integration/clitest/test_cleanse.py::TestCleanseFullAdmin::testCleanseNonsenseName PASSED [ 9%]
02:20:45 test/integration/clitest/test_cleanse.py::TestCleanseRestrictedAdmin::test_cleanse_restricted_admin PASSED [ 9%]
02:20:47 test/integration/clitest/test_cleanse.py::TestFixPyramids::test_fixpyramids_admin_only PASSED [ 9%]
02:20:49 test/integration/clitest/test_cleanse.py::TestFixPyramidsRestrictedAdmin::test_fixpyramids_restricted_admin PASSED [ 10%]
02:20:50 test/integration/clitest/test_db.py::TestDatabase::testBadVersionDies PASSED [ 10%]
02:20:50 test/integration/clitest/test_db.py::TestDatabase::testPasswordIsAskedForAgainIfDiffer PASSED [ 10%]
02:20:51 test/integration/clitest/test_db.py::TestDatabase::testPasswordIsAskedForAgainIfEmpty PASSED [ 10%]
02:20:51 test/integration/clitest/test_db.py::TestDatabase::testPassword[--] PASSED [ 10%]
02:20:51 test/integration/clitest/test_db.py::TestDatabase::testPassword[----no-salt] PASSED [ 10%]
02:20:52 test/integration/clitest/test_db.py::TestDatabase::testPassword[-0-] PASSED [ 10%]
02:20:52 test/integration/clitest/test_db.py::TestDatabase::testPassword[-0---no-salt] PASSED [ 10%]
02:20:53 test/integration/clitest/test_db.py::TestDatabase::testPassword[-1-] PASSED [ 10%]
02:20:53 test/integration/clitest/test_db.py::TestDatabase::testPassword[-1---no-salt] PASSED [ 10%]
02:20:54 test/integration/clitest/test_db.py::TestDatabase::testPassword[ome--] PASSED [ 10%]
02:20:54 test/integration/clitest/test_db.py::TestDatabase::testPassword[ome----no-salt] PASSED [ 10%]
02:20:55 test/integration/clitest/test_db.py::TestDatabase::testPassword[ome-0-] PASSED [ 10%]
02:20:55 test/integration/clitest/test_db.py::TestDatabase::testPassword[ome-0---no-salt] PASSED [ 10%]
02:20:56 test/integration/clitest/test_db.py::TestDatabase::testPassword[ome-1-] PASSED [ 10%]
02:20:56 test/integration/clitest/test_db.py::TestDatabase::testPassword[ome-1---no-salt] PASSED [ 10%]
02:20:57 test/integration/clitest/test_db.py::TestDatabase::testScript[--] PASSED [ 10%]
02:20:58 test/integration/clitest/test_db.py::TestDatabase::testScript[---f] PASSED [ 10%]
02:20:59 test/integration/clitest/test_db.py::TestDatabase::testScript[----file] PASSED [ 10%]
02:21:01 test/integration/clitest/test_db.py::TestDatabase::testScript[---no-salt-] PASSED [ 10%]
02:21:02 test/integration/clitest/test_db.py::TestDatabase::testScript[---no-salt--f] PASSED [ 11%]
02:21:03 test/integration/clitest/test_db.py::TestDatabase::testScript[---no-salt---file] PASSED [ 11%]
02:21:04 test/integration/clitest/test_db.py::TestDatabase::testScript[--password ome--] PASSED [ 11%]
02:21:05 test/integration/clitest/test_db.py::TestDatabase::testScript[--password ome---f] PASSED [ 11%]
02:21:06 test/integration/clitest/test_db.py::TestDatabase::testScript[--password ome----file] PASSED [ 11%]
02:21:08 test/integration/clitest/test_db.py::TestDatabase::testScript[--password ome---no-salt-] PASSED [ 11%]
02:21:09 test/integration/clitest/test_db.py::TestDatabase::testScript[--password ome---no-salt--f] PASSED [ 11%]
02:21:10 test/integration/clitest/test_db.py::TestDatabase::testScript[--password ome---no-salt---file] PASSED [ 11%]
02:21:10 test/integration/clitest/test_db.py::TestDatabase::testScriptDeveloperArgs[%s %s %s--] PASSED [ 11%]
02:21:11 test/integration/clitest/test_db.py::TestDatabase::testScriptDeveloperArgs[%s %s %s---f] PASSED [ 11%]
02:21:11 test/integration/clitest/test_db.py::TestDatabase::testScriptDeveloperArgs[%s %s %s----file] PASSED [ 11%]
02:21:12 test/integration/clitest/test_db.py::TestDatabase::testScriptDeveloperArgs[%s %s %s---no-salt-] PASSED [ 11%]
02:21:12 test/integration/clitest/test_db.py::TestDatabase::testScriptDeveloperArgs[%s %s %s---no-salt--f] PASSED [ 11%]
02:21:13 test/integration/clitest/test_db.py::TestDatabase::testScriptDeveloperArgs[%s %s %s---no-salt---file] PASSED [ 11%]
02:21:13 test/integration/clitest/test_db.py::TestDatabase::testScriptDeveloperArgs[--version %s --patch %s --password %s--] PASSED [ 11%]
02:21:13 test/integration/clitest/test_db.py::TestDatabase::testScriptDeveloperArgs[--version %s --patch %s --password %s---f] PASSED [ 11%]
02:21:14 test/integration/clitest/test_db.py::TestDatabase::testScriptDeveloperArgs[--version %s --patch %s --password %s----file] PASSED [ 11%]
02:21:14 test/integration/clitest/test_db.py::TestDatabase::testScriptDeveloperArgs[--version %s --patch %s --password %s---no-salt-] PASSED [ 11%]
02:21:15 test/integration/clitest/test_db.py::TestDatabase::testScriptDeveloperArgs[--version %s --patch %s --password %s---no-salt--f] PASSED [ 11%]
02:21:15 test/integration/clitest/test_db.py::TestDatabase::testScriptDeveloperArgs[--version %s --patch %s --password %s---no-salt---file] PASSED [ 11%]
02:21:17 test/integration/clitest/test_delete.py::TestDelete::testDeleteMyData[Image-] PASSED [ 12%]
02:21:17 test/integration/clitest/test_delete.py::TestDelete::testDeleteMyData[Image-I] PASSED [ 12%]
02:21:17 test/integration/clitest/test_delete.py::TestDelete::testDeleteMyData[Dataset-] PASSED [ 12%]
02:21:18 test/integration/clitest/test_delete.py::TestDelete::testDeleteMyData[Dataset-I] PASSED [ 12%]
02:21:18 test/integration/clitest/test_delete.py::TestDelete::testDeleteMyData[Project-] PASSED [ 12%]
02:21:18 test/integration/clitest/test_delete.py::TestDelete::testDeleteMyData[Project-I] PASSED [ 12%]
02:21:18 test/integration/clitest/test_delete.py::TestDelete::testDeleteMyData[Plate-] PASSED [ 12%]
02:21:18 test/integration/clitest/test_delete.py::TestDelete::testDeleteMyData[Plate-I] PASSED [ 12%]
02:21:18 test/integration/clitest/test_delete.py::TestDelete::testDeleteMyData[Screen-] PASSED [ 12%]
02:21:18 test/integration/clitest/test_delete.py::TestDelete::testDeleteMyData[Screen-I] PASSED [ 12%]
02:21:22 test/integration/clitest/test_delete.py::TestDelete::testFileset[image-1] PASSED [ 12%]
02:21:26 test/integration/clitest/test_delete.py::TestDelete::testFileset[image-2] PASSED [ 12%]
02:21:30 test/integration/clitest/test_delete.py::TestDelete::testFileset[fileset-1] PASSED [ 12%]
02:21:34 test/integration/clitest/test_delete.py::TestDelete::testFileset[fileset-2] PASSED [ 12%]
02:21:37 test/integration/clitest/test_delete.py::TestDelete::testFilesetPartialFailing PASSED [ 12%]
02:21:41 test/integration/clitest/test_delete.py::TestDelete::testFilesetAllImagesDeleteDataset PASSED [ 12%]
02:21:41 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsSameClass[True-1] PASSED [ 12%]
02:21:41 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsSameClass[True-2] PASSED [ 12%]
02:21:42 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsSameClass[True-3] PASSED [ 12%]
02:21:42 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsSameClass[False-1] PASSED [ 12%]
02:21:42 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsSameClass[False-2] PASSED [ 12%]
02:21:42 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsSameClass[False-3] PASSED [ 13%]
02:21:42 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsTwoClassesSeparated[True-1] PASSED [ 13%]
02:21:42 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsTwoClassesSeparated[True-2] PASSED [ 13%]
02:21:42 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsTwoClassesSeparated[True-3] PASSED [ 13%]
02:21:42 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsTwoClassesSeparated[False-1] PASSED [ 13%]
02:21:42 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsTwoClassesSeparated[False-2] PASSED [ 13%]
02:21:43 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsTwoClassesSeparated[False-3] PASSED [ 13%]
02:21:43 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsTwoClassesInterlaced[True-1] PASSED [ 13%]
02:21:43 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsTwoClassesInterlaced[True-2] PASSED [ 13%]
02:21:43 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsTwoClassesInterlaced[True-3] PASSED [ 13%]
02:21:43 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsTwoClassesInterlaced[False-1] PASSED [ 13%]
02:21:43 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsTwoClassesInterlaced[False-2] PASSED [ 13%]
02:21:44 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsTwoClassesInterlaced[False-3] PASSED [ 13%]
02:21:44 test/integration/clitest/test_delete.py::TestDelete::testBasicSkipheadBothForms[True-1-/Dataset] PASSED [ 13%]
02:21:44 test/integration/clitest/test_delete.py::TestDelete::testBasicSkipheadBothForms[True-1-] PASSED [ 13%]
02:21:44 test/integration/clitest/test_delete.py::TestDelete::testBasicSkipheadBothForms[True-2-/Dataset] PASSED [ 13%]
02:21:44 test/integration/clitest/test_delete.py::TestDelete::testBasicSkipheadBothForms[True-2-] PASSED [ 13%]
02:21:44 test/integration/clitest/test_delete.py::TestDelete::testBasicSkipheadBothForms[False-1-/Dataset] PASSED [ 13%]
02:21:45 test/integration/clitest/test_delete.py::TestDelete::testBasicSkipheadBothForms[False-1-] PASSED [ 13%]
02:21:45 test/integration/clitest/test_delete.py::TestDelete::testBasicSkipheadBothForms[False-2-/Dataset] PASSED [ 13%]
02:21:45 test/integration/clitest/test_delete.py::TestDelete::testBasicSkipheadBothForms[False-2-] PASSED [ 14%]
02:21:45 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsSameClass[True-1] PASSED [ 14%]
02:21:45 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsSameClass[True-2] PASSED [ 14%]
02:21:46 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsSameClass[True-3] PASSED [ 14%]
02:21:46 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsSameClass[False-1] PASSED [ 14%]
02:21:46 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsSameClass[False-2] PASSED [ 14%]
02:21:46 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsSameClass[False-3] PASSED [ 14%]
02:21:46 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsPlusObjectsSeparated[True-1] PASSED [ 14%]
02:21:47 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsPlusObjectsSeparated[True-2] PASSED [ 14%]
02:21:47 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsPlusObjectsSeparated[True-3] PASSED [ 14%]
02:21:47 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsPlusObjectsSeparated[False-1] PASSED [ 14%]
02:21:48 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsPlusObjectsSeparated[False-2] PASSED [ 14%]
02:21:48 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsPlusObjectsSeparated[False-3] PASSED [ 14%]
02:21:48 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsPlusObjectsInterlaced[True-1] PASSED [ 14%]
02:21:48 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsPlusObjectsInterlaced[True-2] PASSED [ 14%]
02:21:49 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsPlusObjectsInterlaced[True-3] PASSED [ 14%]
02:21:49 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsPlusObjectsInterlaced[False-1] PASSED [ 14%]
02:21:49 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsPlusObjectsInterlaced[False-2] PASSED [ 14%]
02:21:49 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsPlusObjectsInterlaced[False-3] PASSED [ 14%]
02:21:49 test/integration/clitest/test_delete.py::TestDelete::testDryRun PASSED [ 14%]
02:21:50 test/integration/clitest/test_delete.py::TestDelete::testExcludeNone PASSED [ 15%]
02:21:50 test/integration/clitest/test_delete.py::TestDelete::testExcludeDataset PASSED [ 15%]
02:21:50 test/integration/clitest/test_delete.py::TestDelete::testExcludeImage PASSED [ 15%]
02:21:50 test/integration/clitest/test_delete.py::TestDelete::testExcludeOverridesInclude PASSED [ 15%]
02:21:50 test/integration/clitest/test_delete.py::TestDelete::testDefaultExclusion PASSED [ 15%]
02:21:50 test/integration/clitest/test_delete.py::TestDelete::testDefaultExclusionOverride PASSED [ 15%]
02:21:50 test/integration/clitest/test_delete.py::TestDelete::testDefaultExclusionPartialOverride PASSED [ 15%]
02:21:51 test/integration/clitest/test_delete.py::TestDelete::testSeparateAnnotationDelete PASSED [ 15%]
02:21:51 test/integration/clitest/test_delete.py::TestDelete::testLinkedAnnotationDelete PASSED [ 15%]
02:21:51 test/integration/clitest/test_delete.py::TestDelete::testLinkedAnnotationDeleteWithOverride PASSED [ 15%]
02:21:51 test/integration/clitest/test_delete.py::TestDelete::testInputWithElisionDefault[1] PASSED [ 15%]
02:21:51 test/integration/clitest/test_delete.py::TestDelete::testInputWithElisionDefault[2] PASSED [ 15%]
02:21:51 test/integration/clitest/test_delete.py::TestDelete::testInputWithElisionDefault[3] PASSED [ 15%]
02:21:52 test/integration/clitest/test_delete.py::TestDelete::testInputWithElisionForce PASSED [ 15%]
02:21:54 test/integration/clitest/test_delete.py::TestDelete::testElisionDefaultFailForce PASSED [ 15%]
02:22:22 test/integration/clitest/test_delete.py::TestDelete::testOutputWithElision PASSED [ 15%]
02:22:24 test/integration/clitest/test_delete.py::TestTagDelete::testDeleteOneTagSetNotTags PASSED [ 15%]
02:22:24 test/integration/clitest/test_delete.py::TestTagDelete::testDeleteTwoTagSetsNotTags PASSED [ 15%]
02:22:24 test/integration/clitest/test_delete.py::TestTagDelete::testDeleteOneTagSetIncludingTags PASSED [ 15%]
02:22:25 test/integration/clitest/test_delete.py::TestTagDelete::testDeleteTwoTagSetsIncludingTags PASSED [ 15%]
02:22:27 test/integration/clitest/test_download.py::TestDownload::testNonExistingOriginalFile[] PASSED [ 16%]
02:22:27 test/integration/clitest/test_download.py::TestDownload::testNonExistingOriginalFile[OriginalFile:] PASSED [ 16%]
02:22:27 test/integration/clitest/test_download.py::TestDownload::testOriginalFileTmpfile[] PASSED [ 16%]
02:22:27 test/integration/clitest/test_download.py::TestDownload::testOriginalFileTmpfile[OriginalFile:] PASSED [ 16%]
02:22:27 test/integration/clitest/test_download.py::TestDownload::testOriginalFileStdout[] PASSED [ 16%]
02:22:27 test/integration/clitest/test_download.py::TestDownload::testOriginalFileStdout[OriginalFile:] PASSED [ 16%]
02:22:29 test/integration/clitest/test_download.py::TestDownload::testOriginalFileMultipleGroups[] PASSED [ 16%]
02:22:31 test/integration/clitest/test_download.py::TestDownload::testOriginalFileMultipleGroups[OriginalFile:] PASSED [ 16%]
02:22:31 test/integration/clitest/test_download.py::TestDownload::testNonExistingFileAnnotation PASSED [ 16%]
02:22:31 test/integration/clitest/test_download.py::TestDownload::testFileAnnotationTmpfile PASSED [ 16%]
02:22:31 test/integration/clitest/test_download.py::TestDownload::testFileAnnotationStdout PASSED [ 16%]
02:22:34 test/integration/clitest/test_download.py::TestDownload::testFileAnnotationMultipleGroups PASSED [ 16%]
02:22:37 test/integration/clitest/test_download.py::TestDownload::testNonExistingImage PASSED [ 16%]
02:22:41 test/integration/clitest/test_download.py::TestDownload::testImageFileset[True] PASSED [ 16%]
02:22:44 test/integration/clitest/test_download.py::TestDownload::testImageFileset[False] PASSED [ 16%]
02:22:48 test/integration/clitest/test_download.py::TestDownload::testSingleImageWithCompanion PASSED [ 16%]
02:22:51 test/integration/clitest/test_download.py::TestDownload::testMIF PASSED [ 16%]
02:22:51 test/integration/clitest/test_download.py::TestDownload::testImageNoFileset PASSED [ 16%]
02:22:56 test/integration/clitest/test_download.py::TestDownload::testImageMultipleGroups PASSED [ 16%]
02:22:56 test/integration/clitest/test_download.py::TestDownload::testValidPolicy PASSED [ 16%]
02:23:11 test/integration/clitest/test_download.py::TestDownload::testPolicyGlobalRestriction[+read,+write,+image] PASSED [ 16%]
02:23:11 test/integration/clitest/test_download.py::TestDownload::testPolicyGlobalRestriction[-read,-write,-image,-plate] SKIPPED [ 17%]
02:23:11 test/integration/clitest/test_download.py::TestDownload::testPolicyGlobalRestriction[-read,+write,+image,-plate] SKIPPED [ 17%]
02:23:11 test/integration/clitest/test_download.py::TestDownload::testPolicyGlobalRestriction[+read,+write,+image,-plate] SKIPPED [ 17%]
02:23:11 test/integration/clitest/test_download.py::TestDownload::testPolicyGlobalRestriction[+read,+write,+image,+plate] SKIPPED [ 17%]
02:23:24 test/integration/clitest/test_download.py::TestDownload::testPolicyGroupRestriction[+read,+write,+image] PASSED [ 17%]
02:23:38 test/integration/clitest/test_download.py::TestDownload::testPolicyGroupRestriction[-read,-write,-image,-plate] PASSED [ 17%]
02:23:52 test/integration/clitest/test_download.py::TestDownload::testPolicyGroupRestriction[-read,+write,+image,-plate] PASSED [ 17%]
02:24:06 test/integration/clitest/test_download.py::TestDownload::testPolicyGroupRestriction[+read,+write,+image,-plate] PASSED [ 17%]
02:24:20 test/integration/clitest/test_download.py::TestDownload::testPolicyGroupRestriction[+read,+write,+image,+plate] PASSED [ 17%]
02:24:22 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObject[Image-] PASSED [ 17%]
02:24:22 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObject[Image-I] PASSED [ 17%]
02:24:22 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObject[Dataset-] PASSED [ 17%]
02:24:22 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObject[Dataset-I] PASSED [ 17%]
02:24:22 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObject[Project-] PASSED [ 17%]
02:24:22 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObject[Project-I] PASSED [ 17%]
02:24:22 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObject[Plate-] PASSED [ 17%]
02:24:23 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObject[Plate-I] PASSED [ 17%]
02:24:23 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObject[Screen-] PASSED [ 17%]
02:24:23 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObject[Screen-I] PASSED [ 17%]
02:24:23 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObjectDryRun PASSED [ 17%]
02:24:23 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObjectReport PASSED [ 18%]
02:24:23 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObjectDryRunReport PASSED [ 18%]
02:24:23 test/integration/clitest/test_duplicate.py::TestDuplicate::testBasicHierarchyDuplication PASSED [ 18%]
02:24:23 test/integration/clitest/test_duplicate.py::TestDuplicate::testIgnoreLinks PASSED [ 18%]
02:24:23 test/integration/clitest/test_duplicate.py::TestDuplicate::testIgnoreLinksOverridden PASSED [ 18%]
02:24:23 test/integration/clitest/test_duplicate.py::TestDuplicate::testReferencing PASSED [ 18%]
02:24:23 test/integration/clitest/test_duplicate.py::TestDuplicate::testSkipheadDuplication PASSED [ 18%]
02:24:26 test/integration/clitest/test_fs.py::TestFS::testRepos PASSED [ 18%]
02:24:47 test/integration/clitest/test_fs.py::TestFS::testSetsWithTransfer PASSED [ 18%]
02:24:47 test/integration/clitest/test_fs.py::TestFS::testSetsAdminOnly PASSED [ 18%]
02:24:47 test/integration/clitest/test_fs.py::TestFS::testMkdirAdminOnly PASSED [ 18%]
02:24:51 test/integration/clitest/test_fs.py::TestFS::testImportTime[all-True] PASSED [ 18%]
02:24:55 test/integration/clitest/test_fs.py::TestFS::testImportTime[all-False] PASSED [ 18%]
02:25:10 test/integration/clitest/test_fs.py::TestFS::testImportTime[minmax-True] PASSED [ 18%]
02:25:23 test/integration/clitest/test_fs.py::TestFS::testImportTime[minmax-False] PASSED [ 18%]
02:25:38 test/integration/clitest/test_fs.py::TestFS::testImportTime[thumbnails-True] PASSED [ 18%]
02:25:51 test/integration/clitest/test_fs.py::TestFS::testImportTime[thumbnails-False] PASSED [ 18%]
02:25:53 test/integration/clitest/test_fs.py::TestFsRoot::testMkdirAsAdminSimpleDirCreation PASSED [ 18%]
02:25:53 test/integration/clitest/test_fs.py::TestFsRoot::testMkdirAsAdminHierarchyOnlyPreexisting PASSED [ 18%]
02:25:54 test/integration/clitest/test_fs.py::TestFsRoot::testMkdirAsAdminHierarchyParents PASSED [ 18%]
02:26:02 test/integration/clitest/test_group.py::TestGroup::testList[None-None] PASSED [ 19%]
02:26:06 test/integration/clitest/test_group.py::TestGroup::testList[None-id] PASSED [ 19%]
02:26:09 test/integration/clitest/test_group.py::TestGroup::testList[None-name] PASSED [ 19%]
02:26:13 test/integration/clitest/test_group.py::TestGroup::testList[count-None] PASSED [ 19%]
02:26:16 test/integration/clitest/test_group.py::TestGroup::testList[count-id] PASSED [ 19%]
02:26:20 test/integration/clitest/test_group.py::TestGroup::testList[count-name] PASSED [ 19%]
02:26:23 test/integration/clitest/test_group.py::TestGroup::testList[long-None] PASSED [ 19%]
02:26:27 test/integration/clitest/test_group.py::TestGroup::testList[long-id] PASSED [ 19%]
02:26:30 test/integration/clitest/test_group.py::TestGroup::testList[long-name] PASSED [ 19%]
02:26:30 test/integration/clitest/test_group.py::TestGroup::testAddAdminOnly PASSED [ 19%]
02:26:30 test/integration/clitest/test_group.py::TestGroup::testInfoNoArgument PASSED [ 19%]
02:26:30 test/integration/clitest/test_group.py::TestGroup::testInfoArgument[id] PASSED [ 19%]
02:26:31 test/integration/clitest/test_group.py::TestGroup::testInfoArgument[name] PASSED [ 19%]
02:26:31 test/integration/clitest/test_group.py::TestGroup::testInfoArgument[--group-id] PASSED [ 19%]
02:26:31 test/integration/clitest/test_group.py::TestGroup::testInfoArgument[--group-name] PASSED [ 19%]
02:26:31 test/integration/clitest/test_group.py::TestGroup::testInfoInvalidGroup PASSED [ 19%]
02:26:31 test/integration/clitest/test_group.py::TestGroup::testListUsersNoArgument PASSED [ 19%]
02:26:31 test/integration/clitest/test_group.py::TestGroup::testListUsersArgument[id] PASSED [ 19%]
02:26:31 test/integration/clitest/test_group.py::TestGroup::testListUsersArgument[name] PASSED [ 19%]
02:26:31 test/integration/clitest/test_group.py::TestGroup::testListUsersArgument[--group-id] PASSED [ 19%]
02:26:31 test/integration/clitest/test_group.py::TestGroup::testListUsersArgument[--group-name] PASSED [ 20%]
02:26:31 test/integration/clitest/test_group.py::TestGroup::testListUsersInvalidArgument PASSED [ 20%]
02:26:33 test/integration/clitest/test_group.py::TestGroupRoot::testAddDefaults PASSED [ 20%]
02:26:33 test/integration/clitest/test_group.py::TestGroupRoot::testAddPerms[--perms-rw----] PASSED [ 20%]
02:26:33 test/integration/clitest/test_group.py::TestGroupRoot::testAddPerms[--perms-rwr---] PASSED [ 20%]
02:26:33 test/integration/clitest/test_group.py::TestGroupRoot::testAddPerms[--perms-rwra--] PASSED [ 20%]
02:26:33 test/integration/clitest/test_group.py::TestGroupRoot::testAddPerms[--perms-rwrw--] PASSED [ 20%]
02:26:33 test/integration/clitest/test_group.py::TestGroupRoot::testAddPerms[--type-private] PASSED [ 20%]
02:26:33 test/integration/clitest/test_group.py::TestGroupRoot::testAddPerms[--type-read-only] PASSED [ 20%]
02:26:33 test/integration/clitest/test_group.py::TestGroupRoot::testAddPerms[--type-read-annotate] PASSED [ 20%]
02:26:33 test/integration/clitest/test_group.py::TestGroupRoot::testAddPerms[--type-read-write] PASSED [ 20%]
02:26:33 test/integration/clitest/test_group.py::TestGroupRoot::testAddSameNamefails PASSED [ 20%]
02:26:34 test/integration/clitest/test_group.py::TestGroupRoot::testAddIgnoreExisting PASSED [ 20%]
02:26:34 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rw-----rw-------id] PASSED [ 20%]
02:26:34 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rw-----rw-------name] PASSED [ 20%]
02:26:35 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rw-----rwr------id] PASSED [ 20%]
02:26:35 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rw-----rwr------name] PASSED [ 20%]
02:26:36 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rw-----rwra-----id] PASSED [ 20%]
02:26:37 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rw-----rwra-----name] PASSED [ 20%]
02:26:38 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rw-----rwrw-----id] PASSED [ 20%]
02:26:39 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rw-----rwrw-----name] PASSED [ 20%]
02:26:39 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwr----rw-------id] PASSED [ 21%]
02:26:39 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwr----rw-------name] PASSED [ 21%]
02:26:39 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwr----rwr------id] PASSED [ 21%]
02:26:39 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwr----rwr------name] PASSED [ 21%]
02:26:39 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwr----rwra-----id] PASSED [ 21%]
02:26:39 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwr----rwra-----name] PASSED [ 21%]
02:26:40 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwr----rwrw-----id] PASSED [ 21%]
02:26:40 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwr----rwrw-----name] PASSED [ 21%]
02:26:40 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwra---rw-------id] PASSED [ 21%]
02:26:40 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwra---rw-------name] PASSED [ 21%]
02:26:40 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwra---rwr------id] PASSED [ 21%]
02:26:41 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwra---rwr------name] PASSED [ 21%]
02:26:41 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwra---rwra-----id] PASSED [ 21%]
02:26:41 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwra---rwra-----name] PASSED [ 21%]
02:26:41 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwra---rwrw-----id] PASSED [ 21%]
02:26:41 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwra---rwrw-----name] PASSED [ 21%]
02:26:41 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwrw---rw-------id] PASSED [ 21%]
02:26:42 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwrw---rw-------name] PASSED [ 21%]
02:26:42 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwrw---rwr------id] PASSED [ 21%]
02:26:42 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwrw---rwr------name] PASSED [ 21%]
02:26:42 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwrw---rwra-----id] PASSED [ 22%]
02:26:42 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwrw---rwra-----name] PASSED [ 22%]
02:26:42 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwrw---rwrw-----id] PASSED [ 22%]
02:26:42 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwrw---rwrw-----name] PASSED [ 22%]
02:26:42 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-private-rw-------id] PASSED [ 22%]
02:26:43 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-private-rw-------name] PASSED [ 22%]
02:26:43 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-private-rwr------id] PASSED [ 22%]
02:26:44 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-private-rwr------name] PASSED [ 22%]
02:26:45 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-private-rwra-----id] PASSED [ 22%]
02:26:46 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-private-rwra-----name] PASSED [ 22%]
02:26:46 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-private-rwrw-----id] PASSED [ 22%]
02:26:47 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-private-rwrw-----name] PASSED [ 22%]
02:26:47 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-only-rw-------id] PASSED [ 22%]
02:26:47 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-only-rw-------name] PASSED [ 22%]
02:26:48 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-only-rwr------id] PASSED [ 22%]
02:26:48 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-only-rwr------name] PASSED [ 22%]
02:26:48 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-only-rwra-----id] PASSED [ 22%]
02:26:48 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-only-rwra-----name] PASSED [ 22%]
02:26:48 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-only-rwrw-----id] PASSED [ 22%]
02:26:48 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-only-rwrw-----name] PASSED [ 22%]
02:26:49 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-annotate-rw-------id] PASSED [ 23%]
02:26:49 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-annotate-rw-------name] PASSED [ 23%]
02:26:49 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-annotate-rwr------id] PASSED [ 23%]
02:26:49 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-annotate-rwr------name] PASSED [ 23%]
02:26:49 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-annotate-rwra-----id] PASSED [ 23%]
02:26:49 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-annotate-rwra-----name] PASSED [ 23%]
02:26:49 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-annotate-rwrw-----id] PASSED [ 23%]
02:26:50 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-annotate-rwrw-----name] PASSED [ 23%]
02:26:50 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-write-rw-------id] PASSED [ 23%]
02:26:50 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-write-rw-------name] PASSED [ 23%]
02:26:50 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-write-rwr------id] PASSED [ 23%]
02:26:50 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-write-rwr------name] PASSED [ 23%]
02:26:51 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-write-rwra-----id] PASSED [ 23%]
02:26:51 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-write-rwra-----name] PASSED [ 23%]
02:26:51 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-write-rwrw-----id] PASSED [ 23%]
02:26:51 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-write-rwrw-----name] PASSED [ 23%]
02:26:53 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[None-id---id] PASSED [ 23%]
02:26:55 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[None-id---name] PASSED [ 23%]
02:26:57 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[None-omeName---id] PASSED [ 23%]
02:26:58 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[None-omeName---name] PASSED [ 23%]
02:27:00 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[None---user-id---id] PASSED [ 24%]
02:27:02 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[None---user-id---name] PASSED [ 24%]
02:27:04 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[None---user-name---id] PASSED [ 24%]
02:27:06 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[None---user-name---name] PASSED [ 24%]
02:27:08 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[--as-owner-id---id] PASSED [ 24%]
02:27:10 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[--as-owner-id---name] PASSED [ 24%]
02:27:12 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[--as-owner-omeName---id] PASSED [ 24%]
02:27:14 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[--as-owner-omeName---name] PASSED [ 24%]
02:27:16 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[--as-owner---user-id---id] PASSED [ 24%]
02:27:18 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[--as-owner---user-id---name] PASSED [ 24%]
02:27:20 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[--as-owner---user-name---id] PASSED [ 24%]
02:27:22 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[--as-owner---user-name---name] PASSED [ 24%]
02:27:24 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-True-id---id] PASSED [ 24%]
02:27:26 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-True-id---name] PASSED [ 24%]
02:27:28 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-True-omeName---id] PASSED [ 24%]
02:27:29 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-True-omeName---name] PASSED [ 24%]
02:27:31 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-True---user-id---id] PASSED [ 24%]
02:27:33 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-True---user-id---name] PASSED [ 24%]
02:27:35 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-True---user-name---id] PASSED [ 24%]
02:27:38 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-True---user-name---name] PASSED [ 24%]
02:27:39 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-False-id---id] PASSED [ 24%]
02:27:41 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-False-id---name] PASSED [ 25%]
02:27:43 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-False-omeName---id] PASSED [ 25%]
02:27:45 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-False-omeName---name] PASSED [ 25%]
02:27:47 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-False---user-id---id] PASSED [ 25%]
02:27:49 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-False---user-id---name] PASSED [ 25%]
02:27:51 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-False---user-name---id] PASSED [ 25%]
02:27:53 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-False---user-name---name] PASSED [ 25%]
02:27:55 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-True-id---id] PASSED [ 25%]
02:27:57 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-True-id---name] PASSED [ 25%]
02:27:59 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-True-omeName---id] PASSED [ 25%]
02:28:01 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-True-omeName---name] PASSED [ 25%]
02:28:03 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-True---user-id---id] PASSED [ 25%]
02:28:05 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-True---user-id---name] PASSED [ 25%]
02:28:07 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-True---user-name---id] PASSED [ 25%]
02:28:09 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-True---user-name---name] PASSED [ 25%]
02:28:11 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-False-id---id] PASSED [ 25%]
02:28:13 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-False-id---name] PASSED [ 25%]
02:28:15 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-False-omeName---id] PASSED [ 25%]
02:28:17 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-False-omeName---name] PASSED [ 25%]
02:28:19 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-False---user-id---id] PASSED [ 25%]
02:28:21 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-False---user-id---name] PASSED [ 26%]
02:28:23 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-False---user-name---id] PASSED [ 26%]
02:28:25 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-False---user-name---name] PASSED [ 26%]
02:28:33 test/integration/clitest/test_group.py::TestGroupRoot::testCopyUsers[None-id-id] PASSED [ 26%]
02:28:41 test/integration/clitest/test_group.py::TestGroupRoot::testCopyUsers[None-id-name] PASSED [ 26%]
02:28:49 test/integration/clitest/test_group.py::TestGroupRoot::testCopyUsers[None-name-id] PASSED [ 26%]
02:28:57 test/integration/clitest/test_group.py::TestGroupRoot::testCopyUsers[None-name-name] PASSED [ 26%]
02:29:05 test/integration/clitest/test_group.py::TestGroupRoot::testCopyUsers[--as-owner-id-id] PASSED [ 26%]
02:29:13 test/integration/clitest/test_group.py::TestGroupRoot::testCopyUsers[--as-owner-id-name] PASSED [ 26%]
02:29:21 test/integration/clitest/test_group.py::TestGroupRoot::testCopyUsers[--as-owner-name-id] PASSED [ 26%]
02:29:28 test/integration/clitest/test_group.py::TestGroupRoot::testCopyUsers[--as-owner-name-name] PASSED [ 26%]
02:29:43 test/integration/clitest/test_import.py::TestImport::testAutoClose PASSED [ 26%]
02:29:56 test/integration/clitest/test_import.py::TestImport::testChecksumAlgorithm[Adler-32-legacy] PASSED [ 26%]
02:30:08 test/integration/clitest/test_import.py::TestImport::testChecksumAlgorithm[Adler-32-underscore] PASSED [ 26%]
02:30:21 test/integration/clitest/test_import.py::TestImport::testChecksumAlgorithm[CRC-32-underscore] PASSED [ 26%]
02:30:33 test/integration/clitest/test_import.py::TestImport::testChecksumAlgorithm[File-Size-64-underscore] PASSED [ 26%]
02:30:46 test/integration/clitest/test_import.py::TestImport::testChecksumAlgorithm[MD5-128-underscore] PASSED [ 26%]
02:30:58 test/integration/clitest/test_import.py::TestImport::testChecksumAlgorithm[Murmur3-32-underscore] PASSED [ 26%]
02:31:11 test/integration/clitest/test_import.py::TestImport::testChecksumAlgorithm[Murmur3-128-underscore] PASSED [ 26%]
02:31:23 test/integration/clitest/test_import.py::TestImport::testChecksumAlgorithm[SHA1-160-underscore] PASSED [ 26%]
02:31:35 test/integration/clitest/test_import.py::TestImport::testAnnotationText[Python-1-Official-True] PASSED [ 27%]
02:31:48 test/integration/clitest/test_import.py::TestImport::testAnnotationText[Python-1-Official-False] PASSED [ 27%]
02:32:00 test/integration/clitest/test_import.py::TestImport::testAnnotationText[Python-1-Deprecated-True] PASSED [ 27%]
02:32:13 test/integration/clitest/test_import.py::TestImport::testAnnotationText[Python-1-Deprecated-False] PASSED [ 27%]
02:32:26 test/integration/clitest/test_import.py::TestImport::testAnnotationText[Java-1-Official-True] PASSED [ 27%]
02:32:38 test/integration/clitest/test_import.py::TestImport::testAnnotationText[Java-1-Official-False] PASSED [ 27%]
02:32:51 test/integration/clitest/test_import.py::TestImport::testAnnotationText[Java-1-Deprecated-True] PASSED [ 27%]
02:33:04 test/integration/clitest/test_import.py::TestImport::testAnnotationText[Java-1-Deprecated-False] PASSED [ 27%]
02:33:16 test/integration/clitest/test_import.py::TestImport::testAnnotationText[Java-2-Official-True] PASSED [ 27%]
02:33:28 test/integration/clitest/test_import.py::TestImport::testAnnotationText[Java-2-Official-False] PASSED [ 27%]
02:33:41 test/integration/clitest/test_import.py::TestImport::testAnnotationText[Java-2-Deprecated-True] PASSED [ 27%]
02:33:54 test/integration/clitest/test_import.py::TestImport::testAnnotationText[Java-2-Deprecated-False] PASSED [ 27%]
02:34:06 test/integration/clitest/test_import.py::TestImport::testAnnotationText_one_ns[Python-1-Official] PASSED [ 27%]
02:34:19 test/integration/clitest/test_import.py::TestImport::testAnnotationText_one_ns[Python-1-Deprecated] PASSED [ 27%]
02:34:31 test/integration/clitest/test_import.py::TestImport::testAnnotationText_one_ns[Java-1-Official] PASSED [ 27%]
02:34:44 test/integration/clitest/test_import.py::TestImport::testAnnotationText_one_ns[Java-1-Deprecated] PASSED [ 27%]
02:34:57 test/integration/clitest/test_import.py::TestImport::testAnnotationText_one_ns[Java-2-Official] PASSED [ 27%]
02:35:10 test/integration/clitest/test_import.py::TestImport::testAnnotationText_one_ns[Java-2-Deprecated] PASSED [ 27%]
02:35:24 test/integration/clitest/test_import.py::TestImport::testAnnotationLink[Python-1-Official] PASSED [ 27%]
02:35:36 test/integration/clitest/test_import.py::TestImport::testAnnotationLink[Python-1-Deprecated] PASSED [ 27%]
02:35:49 test/integration/clitest/test_import.py::TestImport::testAnnotationLink[Java-1-Official] PASSED [ 28%]
02:36:01 test/integration/clitest/test_import.py::TestImport::testAnnotationLink[Java-1-Deprecated] PASSED [ 28%]
02:36:14 test/integration/clitest/test_import.py::TestImport::testAnnotationLink[Java-2-Official] PASSED [ 28%]
02:36:26 test/integration/clitest/test_import.py::TestImport::testAnnotationLink[Java-2-Deprecated] PASSED [ 28%]
02:36:53 test/integration/clitest/test_import.py::TestImport::testTargetArgument[source0-True] PASSED [ 28%]
02:37:19 test/integration/clitest/test_import.py::TestImport::testTargetArgument[source0-False] PASSED [ 28%]
02:37:46 test/integration/clitest/test_import.py::TestImport::testTargetArgument[source1-True] PASSED [ 28%]
02:38:11 test/integration/clitest/test_import.py::TestImport::testTargetArgument[source1-False] PASSED [ 28%]
02:38:38 test/integration/clitest/test_import.py::TestImport::testTargetArgument[source2-True] PASSED [ 28%]
02:39:04 test/integration/clitest/test_import.py::TestImport::testTargetArgument[source2-False] PASSED [ 28%]
02:39:31 test/integration/clitest/test_import.py::TestImport::testTargetArgument[source3-True] PASSED [ 28%]
02:39:56 test/integration/clitest/test_import.py::TestImport::testTargetArgument[source3-False] PASSED [ 28%]
02:40:22 test/integration/clitest/test_import.py::TestImport::testTargetArgument[source4-True] PASSED [ 28%]
02:40:47 test/integration/clitest/test_import.py::TestImport::testTargetArgument[source4-False] PASSED [ 28%]
02:41:13 test/integration/clitest/test_import.py::TestImport::testTargetArgument[source5-True] PASSED [ 28%]
02:41:38 test/integration/clitest/test_import.py::TestImport::testTargetArgument[source5-False] PASSED [ 28%]
02:42:05 test/integration/clitest/test_import.py::TestImport::testQualifiedNameModelTargetArgument[-True] PASSED [ 28%]
02:42:30 test/integration/clitest/test_import.py::TestImport::testQualifiedNameModelTargetArgument[-False] PASSED [ 28%]
02:42:57 test/integration/clitest/test_import.py::TestImport::testQualifiedNameModelTargetArgument[+-True] PASSED [ 28%]
02:43:23 test/integration/clitest/test_import.py::TestImport::testQualifiedNameModelTargetArgument[+-False] PASSED [ 28%]
02:43:49 test/integration/clitest/test_import.py::TestImport::testQualifiedNameModelTargetArgument[--True] PASSED [ 28%]
02:44:14 test/integration/clitest/test_import.py::TestImport::testQualifiedNameModelTargetArgument[--False] PASSED [ 29%]
02:44:40 test/integration/clitest/test_import.py::TestImport::testQualifiedNameModelTargetArgument[%-True] PASSED [ 29%]
02:45:06 test/integration/clitest/test_import.py::TestImport::testQualifiedNameModelTargetArgument[%-False] PASSED [ 29%]
02:45:31 test/integration/clitest/test_import.py::TestImport::testQualifiedNameModelTargetArgument[@-True] PASSED [ 29%]
02:45:57 test/integration/clitest/test_import.py::TestImport::testQualifiedNameModelTargetArgument[@-False] PASSED [ 29%]
02:46:23 test/integration/clitest/test_import.py::TestImport::testQualifiedNameTemplateTargetArgument[-True] PASSED [ 29%]
02:46:48 test/integration/clitest/test_import.py::TestImport::testQualifiedNameTemplateTargetArgument[-False] PASSED [ 29%]
02:47:14 test/integration/clitest/test_import.py::TestImport::testQualifiedNameTemplateTargetArgument[+-True] PASSED [ 29%]
02:47:39 test/integration/clitest/test_import.py::TestImport::testQualifiedNameTemplateTargetArgument[+-False] PASSED [ 29%]
02:48:05 test/integration/clitest/test_import.py::TestImport::testQualifiedNameTemplateTargetArgument[--True] PASSED [ 29%]
02:48:30 test/integration/clitest/test_import.py::TestImport::testQualifiedNameTemplateTargetArgument[--False] PASSED [ 29%]
02:48:56 test/integration/clitest/test_import.py::TestImport::testQualifiedNameTemplateTargetArgument[%-True] PASSED [ 29%]
02:49:21 test/integration/clitest/test_import.py::TestImport::testQualifiedNameTemplateTargetArgument[%-False] PASSED [ 29%]
02:49:48 test/integration/clitest/test_import.py::TestImport::testQualifiedNameTemplateTargetArgument[@-True] PASSED [ 29%]
02:50:13 test/integration/clitest/test_import.py::TestImport::testQualifiedNameTemplateTargetArgument[@-False] PASSED [ 29%]
02:50:26 test/integration/clitest/test_import.py::TestImport::testMultipleNameModelTargets[-True] PASSED [ 29%]
02:50:39 test/integration/clitest/test_import.py::TestImport::testMultipleNameModelTargets[-False] PASSED [ 29%]
02:50:52 test/integration/clitest/test_import.py::TestImport::testMultipleNameModelTargets[+-True] PASSED [ 29%]
02:51:05 test/integration/clitest/test_import.py::TestImport::testMultipleNameModelTargets[+-False] PASSED [ 29%]
02:51:18 test/integration/clitest/test_import.py::TestImport::testMultipleNameModelTargets[--True] PASSED [ 29%]
02:51:31 test/integration/clitest/test_import.py::TestImport::testMultipleNameModelTargets[--False] PASSED [ 30%]
02:51:43 test/integration/clitest/test_import.py::TestImport::testUniqueMultipleNameModelTargets[True] PASSED [ 30%]
02:51:56 test/integration/clitest/test_import.py::TestImport::testUniqueMultipleNameModelTargets[False] PASSED [ 30%]
02:52:09 test/integration/clitest/test_import.py::TestImport::testNestedNameTemplateTargetArgument[True] PASSED [ 30%]
02:52:22 test/integration/clitest/test_import.py::TestImport::testNestedNameTemplateTargetArgument[False] PASSED [ 30%]
02:52:36 test/integration/clitest/test_import.py::TestImport::testMultipleNameTemplateTargetArgument[-True] PASSED [ 30%]
02:52:48 test/integration/clitest/test_import.py::TestImport::testMultipleNameTemplateTargetArgument[-False] PASSED [ 30%]
02:53:02 test/integration/clitest/test_import.py::TestImport::testMultipleNameTemplateTargetArgument[+-True] PASSED [ 30%]
02:53:15 test/integration/clitest/test_import.py::TestImport::testMultipleNameTemplateTargetArgument[+-False] PASSED [ 30%]
02:53:28 test/integration/clitest/test_import.py::TestImport::testMultipleNameTemplateTargetArgument[--True] PASSED [ 30%]
02:53:41 test/integration/clitest/test_import.py::TestImport::testMultipleNameTemplateTargetArgument[--False] PASSED [ 30%]
02:53:54 test/integration/clitest/test_import.py::TestImport::testMultipleNameTemplateTargetArgument[@-True] PASSED [ 30%]
02:54:07 test/integration/clitest/test_import.py::TestImport::testMultipleNameTemplateTargetArgument[@-False] PASSED [ 30%]
02:54:20 test/integration/clitest/test_import.py::TestImport::testUniqueMultipleNameTemplateTargetArgument[True] PASSED [ 30%]
02:54:33 test/integration/clitest/test_import.py::TestImport::testUniqueMultipleNameTemplateTargetArgument[False] PASSED [ 30%]
02:54:50 test/integration/clitest/test_import.py::TestImport::testImportLinkableTarget[False-False] PASSED [ 30%]
02:55:07 test/integration/clitest/test_import.py::TestImport::testImportLinkableTarget[False-True] PASSED [ 30%]
02:55:25 test/integration/clitest/test_import.py::TestImport::testImportLinkableTarget[True-False] PASSED [ 30%]
02:55:42 test/integration/clitest/test_import.py::TestImport::testImportLinkableTarget[True-True] PASSED [ 30%]
02:55:54 test/integration/clitest/test_import.py::TestImport::testBadTargetArgument[Project] PASSED [ 30%]
02:56:06 test/integration/clitest/test_import.py::TestImport::testBadTargetArgument[Plate] PASSED [ 31%]
02:56:18 test/integration/clitest/test_import.py::TestImport::testBadTargetArgument[Image] PASSED [ 31%]
02:56:31 test/integration/clitest/test_import.py::TestImport::testBadModelTargetDiscriminator[Dataset] PASSED [ 31%]
02:56:43 test/integration/clitest/test_import.py::TestImport::testBadModelTargetDiscriminator[Screen] PASSED [ 31%]
02:56:56 test/integration/clitest/test_import.py::TestImport::testDebugArgument[None-ALL] PASSED [ 31%]
02:57:09 test/integration/clitest/test_import.py::TestImport::testDebugArgument[None-TRACE] PASSED [ 31%]
02:57:21 test/integration/clitest/test_import.py::TestImport::testDebugArgument[None-DEBUG] PASSED [ 31%]
02:57:34 test/integration/clitest/test_import.py::TestImport::testDebugArgument[None-INFO] PASSED [ 31%]
02:57:47 test/integration/clitest/test_import.py::TestImport::testDebugArgument[None-WARN] PASSED [ 31%]
02:58:00 test/integration/clitest/test_import.py::TestImport::testDebugArgument[None-ERROR] PASSED [ 31%]
02:58:13 test/integration/clitest/test_import.py::TestImport::testDebugArgument[---ALL] PASSED [ 31%]
02:58:25 test/integration/clitest/test_import.py::TestImport::testDebugArgument[---TRACE] PASSED [ 31%]
02:58:38 test/integration/clitest/test_import.py::TestImport::testDebugArgument[---DEBUG] PASSED [ 31%]
02:58:51 test/integration/clitest/test_import.py::TestImport::testDebugArgument[---INFO] PASSED [ 31%]
02:59:04 test/integration/clitest/test_import.py::TestImport::testDebugArgument[---WARN] PASSED [ 31%]
02:59:16 test/integration/clitest/test_import.py::TestImport::testDebugArgument[---ERROR] PASSED [ 31%]
02:59:29 test/integration/clitest/test_import.py::TestImport::testImportOutputDefault PASSED [ 31%]
02:59:42 test/integration/clitest/test_import.py::TestImport::testImportOutputYaml PASSED [ 31%]
02:59:55 test/integration/clitest/test_import.py::TestImport::testImportOutputLegacy PASSED [ 31%]
03:00:08 test/integration/clitest/test_import.py::TestImport::testImportOutputDefaultWithScreen[1] PASSED [ 31%]
03:00:23 test/integration/clitest/test_import.py::TestImport::testImportOutputDefaultWithScreen[2] PASSED [ 32%]
03:00:37 test/integration/clitest/test_import.py::TestImport::testImportOutputDefaultWithScreen[3] PASSED [ 32%]
03:00:52 test/integration/clitest/test_import.py::TestImport::testImportAsRoot PASSED [ 32%]
03:01:08 test/integration/clitest/test_import.py::TestImport::testImportMultiGroup PASSED [ 32%]
03:01:22 test/integration/clitest/test_import.py::TestImport::testImportAsRootMultiGroup PASSED [ 32%]
03:01:35 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Image] PASSED [ 32%]
03:01:48 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Image-x] PASSED [ 32%]
03:02:00 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Image--description] PASSED [ 32%]
03:02:13 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Image-n] PASSED [ 32%]
03:02:26 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Image-n-x] PASSED [ 32%]
03:02:38 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Image-n--description] PASSED [ 32%]
03:02:50 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Image--name] PASSED [ 32%]
03:03:03 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Image--name-x] PASSED [ 32%]
03:03:15 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Image--name--description] PASSED [ 32%]
03:03:29 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Plate] PASSED [ 32%]
03:03:42 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Plate-x] PASSED [ 32%]
03:03:55 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Plate--description] PASSED [ 32%]
03:04:08 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Plate--plate_description] PASSED [ 32%]
03:04:21 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Plate-n] PASSED [ 32%]
03:04:34 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Plate-n-x] PASSED [ 32%]
03:04:47 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Plate-n--description] PASSED [ 32%]
03:05:00 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Plate-n--plate_description] PASSED [ 33%]
03:05:13 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Plate--name] PASSED [ 33%]
03:05:26 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Plate--name-x] PASSED [ 33%]
03:05:38 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Plate--name--description] PASSED [ 33%]
03:05:52 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Plate--name--plate_description] PASSED [ 33%]
03:06:05 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Plate--plate_name] PASSED [ 33%]
03:06:18 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Plate--plate_name-x] PASSED [ 33%]
03:06:30 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Plate--plate_name--description] PASSED [ 33%]
03:06:43 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Plate--plate_name--plate_description] PASSED [ 33%]
03:06:55 test/integration/clitest/test_import.py::TestImport::testNoThumbnails[--no-thumbnails] PASSED [ 33%]
03:07:07 test/integration/clitest/test_import.py::TestImport::testNoThumbnails[--no_thumbnails] PASSED [ 33%]
03:07:20 test/integration/clitest/test_import.py::TestImport::testSkipArguments[] PASSED [ 33%]
03:07:22 test/integration/clitest/test_import.py::TestImport::testSkipArguments[all] PASSED [ 33%]
03:07:34 test/integration/clitest/test_import.py::TestImport::testSkipArguments[checksum] PASSED [ 33%]
03:07:47 test/integration/clitest/test_import.py::TestImport::testSkipArguments[minmax] PASSED [ 33%]
03:07:59 test/integration/clitest/test_import.py::TestImport::testSkipArguments[thumbnails] PASSED [ 33%]
03:08:01 test/integration/clitest/test_import.py::TestImport::testSkipArguments[upgrade] PASSED [ 33%]
03:08:14 test/integration/clitest/test_import.py::TestImport::testSymlinkImport PASSED [ 33%]
03:08:26 test/integration/clitest/test_import.py::TestImport::testUnknownTarget[Dataset-test.fake--d] PASSED [ 33%]
03:08:38 test/integration/clitest/test_import.py::TestImport::testUnknownTarget[Screen-SPW&plates=1&plateRows=1&plateCols=1&fields=1&plateAcqs=1.fake--r] PASSED [ 33%]
03:08:51 test/integration/clitest/test_import.py::TestImport::testEncryption[] PASSED [ 34%]
03:09:03 test/integration/clitest/test_import.py::TestImport::testEncryption[--encrypted=false] PASSED [ 34%]
03:09:16 test/integration/clitest/test_import.py::TestImport::testEncryption[--encrypted=true] PASSED [ 34%]
03:09:16 test/integration/clitest/test_import.py::TestImport::testBulk PASSED [ 34%]
03:09:28 test/integration/clitest/test_import.py::TestImport::testParallelUpload PASSED [ 34%]
03:09:43 test/integration/clitest/test_import.py::TestImport::testParallelFileset PASSED [ 34%]
03:10:08 test/integration/clitest/test_import.py::TestImport::testBulkImportLogs PASSED [ 34%]
03:10:24 test/integration/clitest/test_import_bulk.py::TestImportBulk::testBulk PASSED [ 34%]
03:10:26 test/integration/clitest/test_ldap.py::TestLDAP::testAdminOnly[active] PASSED [ 34%]
03:10:26 test/integration/clitest/test_ldap.py::TestLDAP::testAdminOnly[discover] PASSED [ 34%]
03:10:26 test/integration/clitest/test_ldap.py::TestLDAP::testAdminOnly[create] PASSED [ 34%]
03:10:26 test/integration/clitest/test_ldap.py::TestLDAP::testAdminOnly[getdn] PASSED [ 34%]
03:10:26 test/integration/clitest/test_ldap.py::TestLDAP::testAdminOnly[setdn] PASSED [ 34%]
03:10:31 test/integration/clitest/test_metadata.py::TestMetadata::test_get_identifiers PASSED [ 34%]
03:10:35 test/integration/clitest/test_metadata.py::TestMetadata::test_get_parents[False] PASSED [ 34%]
03:10:38 test/integration/clitest/test_metadata.py::TestMetadata::test_get_parents[True] PASSED [ 34%]
03:10:42 test/integration/clitest/test_metadata.py::TestMetadata::test_get_roi_count[0] PASSED [ 34%]
03:10:45 test/integration/clitest/test_metadata.py::TestMetadata::test_get_roi_count[1] PASSED [ 34%]
03:10:49 test/integration/clitest/test_metadata.py::TestMetadata::test_get_original PASSED [ 34%]
03:10:52 test/integration/clitest/test_metadata.py::TestMetadata::test_get_bulkanns[False] PASSED [ 34%]
03:10:56 test/integration/clitest/test_metadata.py::TestMetadata::test_get_bulkanns[True] PASSED [ 35%]
03:10:59 test/integration/clitest/test_metadata.py::TestMetadata::test_get_measures[False] PASSED [ 35%]
03:11:03 test/integration/clitest/test_metadata.py::TestMetadata::test_get_measures[True] PASSED [ 35%]
03:11:07 test/integration/clitest/test_metadata.py::TestMetadata::test_get_allanns[False] PASSED [ 35%]
03:11:10 test/integration/clitest/test_metadata.py::TestMetadata::test_get_allanns[True] PASSED [ 35%]
03:11:16 test/integration/clitest/test_metadata.py::TestMetadataControl::test_original PASSED [ 35%]
03:11:19 test/integration/clitest/test_metadata.py::TestMetadataControl::test_bulkanns[False] PASSED [ 35%]
03:11:23 test/integration/clitest/test_metadata.py::TestMetadataControl::test_bulkanns[True] PASSED [ 35%]
03:11:26 test/integration/clitest/test_metadata.py::TestMetadataControl::test_measures[False] PASSED [ 35%]
03:11:30 test/integration/clitest/test_metadata.py::TestMetadataControl::test_measures[True] PASSED [ 35%]
03:11:33 test/integration/clitest/test_metadata.py::TestMetadataControl::test_mapanns[False] PASSED [ 35%]
03:11:37 test/integration/clitest/test_metadata.py::TestMetadataControl::test_mapanns[True] PASSED [ 35%]
03:11:40 test/integration/clitest/test_metadata.py::TestMetadataControl::test_allanns[False] PASSED [ 35%]
03:11:44 test/integration/clitest/test_metadata.py::TestMetadataControl::test_allanns[True] PASSED [ 35%]
03:11:48 test/integration/clitest/test_metadata.py::TestMetadataControl::test_pixelsize PASSED [ 35%]
03:11:50 test/integration/clitest/test_obj.py::TestObj::test_create_from_file PASSED [ 35%]
03:11:50 test/integration/clitest/test_obj.py::TestObj::test_create_from_args PASSED [ 35%]
03:11:50 test/integration/clitest/test_obj.py::TestObj::test_linkage PASSED [ 35%]
03:11:50 test/integration/clitest/test_obj.py::TestObj::test_linkage_via_variables PASSED [ 35%]
03:11:50 test/integration/clitest/test_obj.py::TestObj::test_required[input0] PASSED [ 35%]
03:11:50 test/integration/clitest/test_obj.py::TestObj::test_required[input1] PASSED [ 36%]
03:11:50 test/integration/clitest/test_obj.py::TestObj::test_required[input2] PASSED [ 36%]
03:11:50 test/integration/clitest/test_obj.py::TestObj::test_link_annotation PASSED [ 36%]
03:11:51 test/integration/clitest/test_obj.py::TestObj::test_new_get_and_update PASSED [ 36%]
03:11:51 test/integration/clitest/test_obj.py::TestObj::test_fail_leading_numbers_argument PASSED [ 36%]
03:11:51 test/integration/clitest/test_obj.py::TestObj::test_argument_with_letters_and_numbers PASSED [ 36%]
03:11:51 test/integration/clitest/test_obj.py::TestObj::test_new_and_get_obj PASSED [ 36%]
03:11:55 test/integration/clitest/test_obj.py::TestObj::test_get_unit_and_value PASSED [ 36%]
03:11:55 test/integration/clitest/test_obj.py::TestObj::test_get_unknown_and_empty_field PASSED [ 36%]
03:11:55 test/integration/clitest/test_obj.py::TestObj::test_get_fields PASSED [ 36%]
03:11:55 test/integration/clitest/test_obj.py::TestObj::test_get_list_field PASSED [ 36%]
03:11:56 test/integration/clitest/test_obj.py::TestObj::test_list_get PASSED [ 36%]
03:11:56 test/integration/clitest/test_obj.py::TestObj::test_map_mods PASSED [ 36%]
03:11:56 test/integration/clitest/test_obj.py::TestObj::test_nulling PASSED [ 36%]
03:11:56 test/integration/clitest/test_obj.py::TestObj::test_newlines PASSED [ 36%]
03:11:58 test/integration/clitest/test_pyramids.py::TestRemovePyramids::test_removepyramids_admin_only PASSED [ 36%]
03:12:01 test/integration/clitest/test_pyramids.py::TestRemovePyramidsRestrictedAdmin::test_removepyramids_restricted_admin PASSED [ 36%]
03:12:14 test/integration/clitest/test_pyramids.py::TestRemovePyramidsFullAdmin::test_remove_pyramids_little_endian PASSED [ 36%]
03:12:22 test/integration/clitest/test_pyramids.py::TestRemovePyramidsFullAdmin::test_remove_pyramids_imported_after_future PASSED [ 36%]
03:12:38 test/integration/clitest/test_pyramids.py::TestRemovePyramidsFullAdmin::test_remove_pyramids_limit PASSED [ 36%]
03:12:55 test/integration/clitest/test_pyramids.py::TestRemovePyramidsFullAdmin::test_remove_pyramids_not_valid_limit PASSED [ 36%]
03:12:55 test/integration/clitest/test_pyramids.py::TestRemovePyramidsFullAdmin::test_remove_pyramids_manual SKIPPED [ 37%]
03:13:16 test/integration/clitest/test_pyramids.py::TestRemovePyramidsFullAdmin::test_remove__pre_fs_pyramids PASSED [ 37%]
03:13:33 test/integration/clitest/test_pyramids.py::TestRemovePyramidsFullAdmin::test_remove_pyramids_big_endian PASSED [ 37%]
03:14:06 test/integration/clitest/test_pyramids.py::TestRemovePyramidsFullAdmin::test_remove_pyramids PASSED [ 37%]
03:14:25 test/integration/clitest/test_pyramids.py::TestRemovePyramidsFullAdmin::test_remove_pyramids_check_thumbnails PASSED [ 37%]
03:14:28 test/integration/clitest/test_script.py::TestScript::testList PASSED [ 37%]
03:14:41 test/integration/clitest/test_script.py::TestScript::testDemo PASSED [ 37%]
03:14:52 test/integration/clitest/test_script.py::TestScript::testFullSession PASSED [ 37%]
03:15:12 test/integration/clitest/test_script.py::TestScript::testReplace PASSED [ 37%]
03:15:13 test/integration/clitest/test_script.py::TestScript::testReplaceOfficial PASSED [ 37%]
03:15:22 test/integration/clitest/test_search.py::TestSearch::test_search_basic PASSED [ 37%]
03:15:28 test/integration/clitest/test_search.py::TestSearch::test_search_wildcard PASSED [ 37%]
03:15:34 test/integration/clitest/test_search.py::TestSearch::test_search_name_field PASSED [ 37%]
03:15:40 test/integration/clitest/test_search.py::TestSearch::test_search_description_field PASSED [ 37%]
03:15:46 test/integration/clitest/test_search.py::TestSearch::test_search_style PASSED [ 37%]
03:15:52 test/integration/clitest/test_search.py::TestSearch::test_search_ids_only PASSED [ 37%]
03:15:58 test/integration/clitest/test_search.py::TestSearch::test_search_acquisition_date[data0] PASSED [ 37%]
03:16:05 test/integration/clitest/test_search.py::TestSearch::test_search_acquisition_date[data1] PASSED [ 37%]
03:16:11 test/integration/clitest/test_search.py::TestSearch::test_search_other_dates[data0] PASSED [ 37%]
03:16:17 test/integration/clitest/test_search.py::TestSearch::test_search_other_dates[data1] PASSED [ 37%]
03:16:23 test/integration/clitest/test_search.py::TestSearch::test_search_other_dates[data2] PASSED [ 38%]
03:16:29 test/integration/clitest/test_search.py::TestSearch::test_search_other_dates[data3] PASSED [ 38%]
03:16:35 test/integration/clitest/test_search.py::TestSearch::test_search_other_dates[data4] PASSED [ 38%]
03:16:41 test/integration/clitest/test_search.py::TestSearch::test_search_no_parse PASSED [ 38%]
03:16:43 test/integration/clitest/test_search.py::TestSearch::test_search_dataset_acquisition PASSED [ 38%]
03:16:49 test/integration/clitest/test_search.py::TestSearch::test_search_index_by_user PASSED [ 38%]
03:16:53 test/integration/clitest/test_sessions.py::TestSessions::testLogin[None-True] PASSED [ 38%]
03:16:55 test/integration/clitest/test_sessions.py::TestSessions::testLogin[None-False] PASSED [ 38%]
03:16:57 test/integration/clitest/test_sessions.py::TestSessions::testLogin[300-True] PASSED [ 38%]
03:16:59 test/integration/clitest/test_sessions.py::TestSessions::testLogin[300-False] PASSED [ 38%]
03:17:07 test/integration/clitest/test_sessions.py::TestSessions::testLoginAs[rw----] PASSED [ 38%]
03:17:15 test/integration/clitest/test_sessions.py::TestSessions::testLoginAs[rwr---] PASSED [ 38%]
03:17:23 test/integration/clitest/test_sessions.py::TestSessions::testLoginAs[rwra--] PASSED [ 38%]
03:17:31 test/integration/clitest/test_sessions.py::TestSessions::testLoginAs[rwrw--] PASSED [ 38%]
03:17:33 test/integration/clitest/test_sessions.py::TestSessions::testLoginMultiGroup[True-True] PASSED [ 38%]
03:17:35 test/integration/clitest/test_sessions.py::TestSessions::testLoginMultiGroup[True-False] PASSED [ 38%]
03:17:37 test/integration/clitest/test_sessions.py::TestSessions::testLoginMultiGroup[False-True] PASSED [ 38%]
03:17:39 test/integration/clitest/test_sessions.py::TestSessions::testLoginMultiGroup[False-False] PASSED [ 38%]
03:17:41 test/integration/clitest/test_sessions.py::TestSessions::testGroup PASSED [ 38%]
03:17:42 test/integration/clitest/test_sessions.py::TestSessions::testTimeout PASSED [ 38%]
03:17:42 test/integration/clitest/test_sessions.py::TestSessions::testFile PASSED [ 39%]
03:17:44 test/integration/clitest/test_sessions.py::TestSessions::testKey PASSED [ 39%]
03:17:46 test/integration/clitest/test_sessions.py::TestSessions::testWho[user] PASSED [ 39%]
03:17:46 test/integration/clitest/test_sessions.py::TestSessions::testWho[root] PASSED [ 39%]
03:17:48 test/integration/clitest/test_sessions.py::TestSessions::test_open PASSED [ 39%]
03:17:50 test/integration/clitest/test_sessions.py::TestSessions::test_open_with_id PASSED [ 39%]
03:17:54 test/integration/clitest/test_sessions.py::TestSessions::test_open_restricted_admin_no_sudo PASSED [ 39%]
03:17:58 test/integration/clitest/test_sessions.py::TestSessions::test_open_restricted_admin_sudo PASSED [ 39%]
03:18:00 test/integration/clitest/test_sessions.py::TestSessions::test_close PASSED [ 39%]
03:18:02 test/integration/clitest/test_tag.py::TestTag::testCreateTag[None-None] PASSED [ 39%]
03:18:02 test/integration/clitest/test_tag.py::TestTag::testCreateTag[None---name] PASSED [ 39%]
03:18:02 test/integration/clitest/test_tag.py::TestTag::testCreateTag[--description-None] PASSED [ 39%]
03:18:02 test/integration/clitest/test_tag.py::TestTag::testCreateTag[--description---name] PASSED [ 39%]
03:18:02 test/integration/clitest/test_tag.py::TestTag::testCreateTagset[None-None] PASSED [ 39%]
03:18:02 test/integration/clitest/test_tag.py::TestTag::testCreateTagset[None---name] PASSED [ 39%]
03:18:02 test/integration/clitest/test_tag.py::TestTag::testCreateTagset[--desc-None] PASSED [ 39%]
03:18:02 test/integration/clitest/test_tag.py::TestTag::testCreateTagset[--desc---name] PASSED [ 39%]
03:18:02 test/integration/clitest/test_tag.py::TestTag::testLoadTag PASSED [ 39%]
03:18:02 test/integration/clitest/test_tag.py::TestTag::testLoadTagset PASSED [ 39%]
03:18:03 test/integration/clitest/test_tag.py::TestTag::testLink[Image] PASSED [ 39%]
03:18:03 test/integration/clitest/test_tag.py::TestTag::testLink[Dataset] PASSED [ 40%]
03:18:03 test/integration/clitest/test_tag.py::TestTag::testLink[Project] PASSED [ 40%]
03:18:03 test/integration/clitest/test_tag.py::TestTag::testLink[Screen] PASSED [ 40%]
03:18:03 test/integration/clitest/test_tag.py::TestTag::testLink[Plate] PASSED [ 40%]
03:18:03 test/integration/clitest/test_tag.py::TestTag::testLinkInvalidObject PASSED [ 40%]
03:18:03 test/integration/clitest/test_tag.py::TestTag::testLinkInvalidTag PASSED [ 40%]
03:18:09 test/integration/clitest/test_tag.py::TestPermissions::testLink[rw-----admin-admin] PASSED [ 40%]
03:18:12 test/integration/clitest/test_tag.py::TestPermissions::testLink[rw-----admin-owner] PASSED [ 40%]
03:18:16 test/integration/clitest/test_tag.py::TestPermissions::testLink[rw-----admin-member] PASSED [ 40%]
03:18:20 test/integration/clitest/test_tag.py::TestPermissions::testLink[rw-----owner-admin] PASSED [ 40%]
03:18:24 test/integration/clitest/test_tag.py::TestPermissions::testLink[rw-----owner-owner] PASSED [ 40%]
03:18:28 test/integration/clitest/test_tag.py::TestPermissions::testLink[rw-----owner-member] PASSED [ 40%]
03:18:32 test/integration/clitest/test_tag.py::TestPermissions::testLink[rw-----member-admin] PASSED [ 40%]
03:18:35 test/integration/clitest/test_tag.py::TestPermissions::testLink[rw-----member-owner] PASSED [ 40%]
03:18:39 test/integration/clitest/test_tag.py::TestPermissions::testLink[rw-----member-member] PASSED [ 40%]
03:18:43 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwr----admin-admin] PASSED [ 40%]
03:18:48 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwr----admin-owner] PASSED [ 40%]
03:18:51 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwr----admin-member] PASSED [ 40%]
03:18:55 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwr----owner-admin] PASSED [ 40%]
03:18:59 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwr----owner-owner] PASSED [ 40%]
03:19:03 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwr----owner-member] PASSED [ 40%]
03:19:07 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwr----member-admin] PASSED [ 41%]
03:19:11 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwr----member-owner] PASSED [ 41%]
03:19:15 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwr----member-member] PASSED [ 41%]
03:19:19 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwra---admin-admin] PASSED [ 41%]
03:19:23 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwra---admin-owner] PASSED [ 41%]
03:19:27 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwra---admin-member] PASSED [ 41%]
03:19:31 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwra---owner-admin] PASSED [ 41%]
03:19:35 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwra---owner-owner] PASSED [ 41%]
03:19:40 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwra---owner-member] PASSED [ 41%]
03:19:44 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwra---member-admin] PASSED [ 41%]
03:19:48 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwra---member-owner] PASSED [ 41%]
03:19:53 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwra---member-member] PASSED [ 41%]
03:19:57 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwrw---admin-admin] PASSED [ 41%]
03:20:00 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwrw---admin-owner] PASSED [ 41%]
03:20:05 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwrw---admin-member] PASSED [ 41%]
03:20:09 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwrw---owner-admin] PASSED [ 41%]
03:20:13 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwrw---owner-owner] PASSED [ 41%]
03:20:17 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwrw---owner-member] PASSED [ 41%]
03:20:21 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwrw---member-admin] PASSED [ 41%]
03:20:25 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwrw---member-owner] PASSED [ 41%]
03:20:29 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwrw---member-member] PASSED [ 42%]
03:20:32 test/integration/clitest/test_tag.py::TestTagList::testList[] PASSED [ 42%]
03:20:32 test/integration/clitest/test_tag.py::TestTagList::testList[--nopage] PASSED [ 42%]
03:20:32 test/integration/clitest/test_tag.py::TestTagList::testListSets[] PASSED [ 42%]
03:20:32 test/integration/clitest/test_tag.py::TestTagList::testListSets[--nopage] PASSED [ 42%]
03:20:34 test/integration/clitest/test_upload.py::TestUpload::testUploadSingleFile PASSED [ 42%]
03:20:35 test/integration/clitest/test_upload.py::TestUpload::testUploadMultipleFiles PASSED [ 42%]
03:20:35 test/integration/clitest/test_upload.py::TestUpload::testUploadBadFile PASSED [ 42%]
03:20:50 test/integration/clitest/test_user.py::TestUser::testList[None-None] PASSED [ 42%]
03:21:01 test/integration/clitest/test_user.py::TestUser::testList[None-id] PASSED [ 42%]
03:21:10 test/integration/clitest/test_user.py::TestUser::testList[None-login] PASSED [ 42%]
03:21:21 test/integration/clitest/test_user.py::TestUser::testList[None-first-name] PASSED [ 42%]
03:21:30 test/integration/clitest/test_user.py::TestUser::testList[None-last-name] PASSED [ 42%]
03:21:40 test/integration/clitest/test_user.py::TestUser::testList[None-email] PASSED [ 42%]
03:21:50 test/integration/clitest/test_user.py::TestUser::testList[count-None] PASSED [ 42%]
03:22:00 test/integration/clitest/test_user.py::TestUser::testList[count-id] PASSED [ 42%]
03:22:10 test/integration/clitest/test_user.py::TestUser::testList[count-login] PASSED [ 42%]
03:22:19 test/integration/clitest/test_user.py::TestUser::testList[count-first-name] PASSED [ 42%]
03:22:29 test/integration/clitest/test_user.py::TestUser::testList[count-last-name] PASSED [ 42%]
03:22:39 test/integration/clitest/test_user.py::TestUser::testList[count-email] PASSED [ 42%]
03:22:49 test/integration/clitest/test_user.py::TestUser::testList[long-None] PASSED [ 43%]
03:22:59 test/integration/clitest/test_user.py::TestUser::testList[long-id] PASSED [ 43%]
03:23:09 test/integration/clitest/test_user.py::TestUser::testList[long-login] PASSED [ 43%]
03:23:18 test/integration/clitest/test_user.py::TestUser::testList[long-first-name] PASSED [ 43%]
03:23:28 test/integration/clitest/test_user.py::TestUser::testList[long-last-name] PASSED [ 43%]
03:23:38 test/integration/clitest/test_user.py::TestUser::testList[long-email] PASSED [ 43%]
03:23:41 test/integration/clitest/test_user.py::TestUser::testListWithStyles[None] PASSED [ 43%]
03:23:44 test/integration/clitest/test_user.py::TestUser::testListWithStyles[sql] PASSED [ 43%]
03:23:48 test/integration/clitest/test_user.py::TestUser::testListWithStyles[csv] PASSED [ 43%]
03:23:51 test/integration/clitest/test_user.py::TestUser::testListWithStyles[plain] PASSED [ 43%]
03:23:55 test/integration/clitest/test_user.py::TestUser::testListWithStyles[json] PASSED [ 43%]
03:23:55 test/integration/clitest/test_user.py::TestUser::testInfoNoArgument PASSED [ 43%]
03:23:55 test/integration/clitest/test_user.py::TestUser::testInfoArgument[id] PASSED [ 43%]
03:23:55 test/integration/clitest/test_user.py::TestUser::testInfoArgument[omeName] PASSED [ 43%]
03:23:55 test/integration/clitest/test_user.py::TestUser::testInfoArgument[--user-id] PASSED [ 43%]
03:23:55 test/integration/clitest/test_user.py::TestUser::testInfoArgument[--user-name] PASSED [ 43%]
03:23:55 test/integration/clitest/test_user.py::TestUser::testInfoInvalidUser PASSED [ 43%]
03:23:57 test/integration/clitest/test_user.py::TestUser::testListGroupsNoArgument PASSED [ 43%]
03:24:01 test/integration/clitest/test_user.py::TestUser::testListGroupsArgument[id] PASSED [ 43%]
03:24:03 test/integration/clitest/test_user.py::TestUser::testListGroupsArgument[omeName] PASSED [ 43%]
03:24:06 test/integration/clitest/test_user.py::TestUser::testListGroupsArgument[--user-id] PASSED [ 44%]
03:24:09 test/integration/clitest/test_user.py::TestUser::testListGroupsArgument[--user-name] PASSED [ 44%]
03:24:09 test/integration/clitest/test_user.py::TestUser::testListGroupsInvalidArgument PASSED [ 44%]
03:24:13 test/integration/clitest/test_user.py::TestUser::testEmail[None] PASSED [ 44%]
03:24:16 test/integration/clitest/test_user.py::TestUser::testEmail[-1] PASSED [ 44%]
03:24:19 test/integration/clitest/test_user.py::TestUser::testEmail[--one] PASSED [ 44%]
03:24:26 test/integration/clitest/test_user.py::TestUser::testPassword[True] PASSED [ 44%]
03:24:26 test/integration/clitest/test_user.py::TestUser::testPassword[False] PASSED [ 44%]
03:24:26 test/integration/clitest/test_user.py::TestUser::testAddAdminOnly PASSED [ 44%]
03:24:33 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[None-id---id] PASSED [ 44%]
03:24:35 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[None-id---name] PASSED [ 44%]
03:24:37 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[None-name---id] PASSED [ 44%]
03:24:39 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[None-name---name] PASSED [ 44%]
03:24:41 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[None---group-id---id] PASSED [ 44%]
03:24:43 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[None---group-id---name] PASSED [ 44%]
03:24:45 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[None---group-name---id] PASSED [ 44%]
03:24:47 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[None---group-name---name] PASSED [ 44%]
03:24:49 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[--as-owner-id---id] PASSED [ 44%]
03:24:51 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[--as-owner-id---name] PASSED [ 44%]
03:24:53 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[--as-owner-name---id] PASSED [ 44%]
03:24:55 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[--as-owner-name---name] PASSED [ 44%]
03:24:57 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[--as-owner---group-id---id] PASSED [ 45%]
03:24:59 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[--as-owner---group-id---name] PASSED [ 45%]
03:25:01 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[--as-owner---group-name---id] PASSED [ 45%]
03:25:03 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[--as-owner---group-name---name] PASSED [ 45%]
03:25:05 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-True-id---id] PASSED [ 45%]
03:25:07 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-True-id---name] PASSED [ 45%]
03:25:10 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-True-name---id] PASSED [ 45%]
03:25:12 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-True-name---name] PASSED [ 45%]
03:25:14 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-True---group-id---id] PASSED [ 45%]
03:25:16 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-True---group-id---name] PASSED [ 45%]
03:25:18 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-True---group-name---id] PASSED [ 45%]
03:25:20 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-True---group-name---name] PASSED [ 45%]
03:25:22 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-False-id---id] PASSED [ 45%]
03:25:24 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-False-id---name] PASSED [ 45%]
03:25:27 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-False-name---id] PASSED [ 45%]
03:25:28 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-False-name---name] PASSED [ 45%]
03:25:30 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-False---group-id---id] PASSED [ 45%]
03:25:33 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-False---group-id---name] PASSED [ 45%]
03:25:35 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-False---group-name---id] PASSED [ 45%]
03:25:36 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-False---group-name---name] PASSED [ 45%]
03:25:38 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-True-id---id] PASSED [ 46%]
03:25:41 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-True-id---name] PASSED [ 46%]
03:25:42 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-True-name---id] PASSED [ 46%]
03:25:45 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-True-name---name] PASSED [ 46%]
03:25:46 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-True---group-id---id] PASSED [ 46%]
03:25:49 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-True---group-id---name] PASSED [ 46%]
03:25:51 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-True---group-name---id] PASSED [ 46%]
03:25:53 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-True---group-name---name] PASSED [ 46%]
03:25:55 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-False-id---id] PASSED [ 46%]
03:25:57 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-False-id---name] PASSED [ 46%]
03:25:59 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-False-name---id] PASSED [ 46%]
03:26:01 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-False-name---name] PASSED [ 46%]
03:26:02 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-False---group-id---id] PASSED [ 46%]
03:26:05 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-False---group-id---name] PASSED [ 46%]
03:26:06 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-False---group-name---id] PASSED [ 46%]
03:26:09 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-False---group-name---name] PASSED [ 46%]
03:26:09 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None-None-None-None] PASSED [ 46%]
03:26:09 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None-None-None--m] PASSED [ 46%]
03:26:09 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None-None-None---middlename] PASSED [ 46%]
03:26:10 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None-None--e-None] PASSED [ 46%]
03:26:10 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None-None--e--m] PASSED [ 47%]
03:26:10 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None-None--e---middlename] PASSED [ 47%]
03:26:10 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None-None---email-None] PASSED [ 47%]
03:26:11 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None-None---email--m] PASSED [ 47%]
03:26:11 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None-None---email---middlename] PASSED [ 47%]
03:26:11 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None--i-None-None] PASSED [ 47%]
03:26:11 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None--i-None--m] PASSED [ 47%]
03:26:12 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None--i-None---middlename] PASSED [ 47%]
03:26:12 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None--i--e-None] PASSED [ 47%]
03:26:12 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None--i--e--m] PASSED [ 47%]
03:26:12 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None--i--e---middlename] PASSED [ 47%]
03:26:12 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None--i---email-None] PASSED [ 47%]
03:26:13 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None--i---email--m] PASSED [ 47%]
03:26:13 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None--i---email---middlename] PASSED [ 47%]
03:26:13 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None---institution-None-None] PASSED [ 47%]
03:26:13 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None---institution-None--m] PASSED [ 47%]
03:26:14 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None---institution-None---middlename] PASSED [ 47%]
03:26:14 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None---institution--e-None] PASSED [ 47%]
03:26:14 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None---institution--e--m] PASSED [ 47%]
03:26:14 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None---institution--e---middlename] PASSED [ 47%]
03:26:14 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None---institution---email-None] PASSED [ 48%]
03:26:15 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None---institution---email--m] PASSED [ 48%]
03:26:15 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None---institution---email---middlename] PASSED [ 48%]
03:26:16 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a-None-None-None] PASSED [ 48%]
03:26:16 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a-None-None--m] PASSED [ 48%]
03:26:17 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a-None-None---middlename] PASSED [ 48%]
03:26:18 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a-None--e-None] PASSED [ 48%]
03:26:19 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a-None--e--m] PASSED [ 48%]
03:26:20 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a-None--e---middlename] PASSED [ 48%]
03:26:20 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a-None---email-None] PASSED [ 48%]
03:26:21 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a-None---email--m] PASSED [ 48%]
03:26:22 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a-None---email---middlename] PASSED [ 48%]
03:26:23 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a--i-None-None] PASSED [ 48%]
03:26:23 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a--i-None--m] PASSED [ 48%]
03:26:24 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a--i-None---middlename] PASSED [ 48%]
03:26:25 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a--i--e-None] PASSED [ 48%]
03:26:26 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a--i--e--m] PASSED [ 48%]
03:26:27 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a--i--e---middlename] PASSED [ 48%]
03:26:27 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a--i---email-None] PASSED [ 48%]
03:26:28 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a--i---email--m] PASSED [ 48%]
03:26:29 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a--i---email---middlename] PASSED [ 48%]
03:26:30 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a---institution-None-None] PASSED [ 49%]
03:26:31 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a---institution-None--m] PASSED [ 49%]
03:26:32 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a---institution-None---middlename] PASSED [ 49%]
03:26:33 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a---institution--e-None] PASSED [ 49%]
03:26:34 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a---institution--e--m] PASSED [ 49%]
03:26:35 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a---institution--e---middlename] PASSED [ 49%]
03:26:36 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a---institution---email-None] PASSED [ 49%]
03:26:37 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a---institution---email--m] PASSED [ 49%]
03:26:38 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a---institution---email---middlename] PASSED [ 49%]
03:26:39 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin-None-None-None] PASSED [ 49%]
03:26:40 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin-None-None--m] PASSED [ 49%]
03:26:41 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin-None-None---middlename] PASSED [ 49%]
03:26:41 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin-None--e-None] PASSED [ 49%]
03:26:42 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin-None--e--m] PASSED [ 49%]
03:26:43 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin-None--e---middlename] PASSED [ 49%]
03:26:44 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin-None---email-None] PASSED [ 49%]
03:26:45 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin-None---email--m] PASSED [ 49%]
03:26:46 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin-None---email---middlename] PASSED [ 49%]
03:26:47 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin--i-None-None] PASSED [ 49%]
03:26:48 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin--i-None--m] PASSED [ 49%]
03:26:49 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin--i-None---middlename] PASSED [ 50%]
03:26:50 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin--i--e-None] PASSED [ 50%]
03:26:51 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin--i--e--m] PASSED [ 50%]
03:26:52 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin--i--e---middlename] PASSED [ 50%]
03:26:53 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin--i---email-None] PASSED [ 50%]
03:26:54 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin--i---email--m] PASSED [ 50%]
03:26:55 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin--i---email---middlename] PASSED [ 50%]
03:26:56 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin---institution-None-None] PASSED [ 50%]
03:26:57 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin---institution-None--m] PASSED [ 50%]
03:26:58 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin---institution-None---middlename] PASSED [ 50%]
03:26:59 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin---institution--e-None] PASSED [ 50%]
03:27:00 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin---institution--e--m] PASSED [ 50%]
03:27:01 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin---institution--e---middlename] PASSED [ 50%]
03:27:02 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin---institution---email-None] PASSED [ 50%]
03:27:03 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin---institution---email--m] PASSED [ 50%]
03:27:04 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin---institution---email---middlename] PASSED [ 50%]
03:27:05 test/integration/clitest/test_user.py::TestUserRoot::testAddGroup[id] PASSED [ 50%]
03:27:05 test/integration/clitest/test_user.py::TestUserRoot::testAddGroup[name] PASSED [ 50%]
03:27:06 test/integration/clitest/test_user.py::TestUserRoot::testAddGroup[--group-id] PASSED [ 50%]
03:27:06 test/integration/clitest/test_user.py::TestUserRoot::testAddGroup[--group-name] PASSED [ 50%]
03:27:07 test/integration/clitest/test_user.py::TestUserRoot::testAddPassword[True-None] PASSED [ 51%]
03:27:07 test/integration/clitest/test_user.py::TestUserRoot::testAddPassword[True--P] PASSED [ 51%]
03:27:08 test/integration/clitest/test_user.py::TestUserRoot::testAddPassword[True---userpassword] PASSED [ 51%]
03:27:08 test/integration/clitest/test_user.py::TestUserRoot::testAddPassword[False-None] PASSED [ 51%]
03:27:09 test/integration/clitest/test_user.py::TestUserRoot::testAddPassword[False--P] PASSED [ 51%]
03:27:09 test/integration/clitest/test_user.py::TestUserRoot::testAddPassword[False---userpassword] PASSED [ 51%]
03:27:10 test/integration/clitest/test_user.py::TestUserRoot::testAddNoPassword PASSED [ 51%]
03:27:18 test/integration/clitest/test_user.py::TestUserRoot::testPassword[True] PASSED [ 51%]
03:27:20 test/integration/clitest/test_user.py::TestUserRoot::testPassword[False] PASSED [ 51%]
03:27:23 test/integration/fstest/test_rename.py::TestRename::test_dir PASSED [ 51%]
03:27:32 test/integration/fstest/test_rename.py::TestRename::test_rename_permissions[data0] PASSED [ 51%]
03:27:41 test/integration/fstest/test_rename.py::TestRename::test_rename_permissions[data1] PASSED [ 51%]
03:27:51 test/integration/fstest/test_rename.py::TestRename::test_rename_permissions[data2] PASSED [ 51%]
03:28:01 test/integration/fstest/test_rename.py::TestRename::test_rename_permissions[data3] PASSED [ 51%]
03:28:11 test/integration/fstest/test_rename.py::TestRename::test_rename_permissions[data4] PASSED [ 51%]
03:28:16 test/integration/fstest/test_rename.py::TestRename::test_rename_annotation PASSED [ 51%]
03:28:16 test/integration/fstest/test_rename.py::TestRename::test_prep_and_delete PASSED [ 51%]
03:28:21 test/integration/gatewaytest/test_annotation.py::testSameOwner PASSED [ 51%]
03:28:23 test/integration/gatewaytest/test_annotation.py::testCommentAnnotation PASSED [ 51%]
03:28:24 test/integration/gatewaytest/test_annotation.py::testNonDefGroupAnnotation PASSED [ 51%]
03:28:25 test/integration/gatewaytest/test_annotation.py::testTimestampAnnotation PASSED [ 52%]
03:28:26 test/integration/gatewaytest/test_annotation.py::testBooleanAnnotation PASSED [ 52%]
03:28:27 test/integration/gatewaytest/test_annotation.py::testLongAnnotation PASSED [ 52%]
03:28:28 test/integration/gatewaytest/test_annotation.py::testMapAnnotation PASSED [ 52%]
03:28:30 test/integration/gatewaytest/test_annotation.py::testDualLinkedAnnotation PASSED [ 52%]
03:28:31 test/integration/gatewaytest/test_annotation.py::testListAnnotations PASSED [ 52%]
03:28:32 test/integration/gatewaytest/test_annotation.py::testFileAnnotation PASSED [ 52%]
03:28:34 test/integration/gatewaytest/test_annotation.py::testFileAnnotationNoName PASSED [ 52%]
03:28:36 test/integration/gatewaytest/test_annotation.py::testFileAnnotationSpeed PASSED [ 52%]
03:28:37 test/integration/gatewaytest/test_annotation.py::testFileAnnNonDefaultGroup PASSED [ 52%]
03:28:39 test/integration/gatewaytest/test_annotation.py::testUnlinkAnnotation PASSED [ 52%]
03:28:40 test/integration/gatewaytest/test_annotation.py::testAnnotationCount PASSED [ 52%]
03:28:41 test/integration/gatewaytest/test_chgrp.py::testImageChgrp PASSED [ 52%]
03:28:43 test/integration/gatewaytest/test_chgrp.py::testDatasetChgrp PASSED [ 52%]
03:28:44 test/integration/gatewaytest/test_chgrp.py::testPDIChgrp PASSED [ 52%]
03:28:46 test/integration/gatewaytest/test_chgrp.py::testTwoDatasetsChgrpToProject PASSED [ 52%]
03:28:47 test/integration/gatewaytest/test_chgrp.py::testMultiDatasetDoAll PASSED [ 52%]
03:28:50 test/integration/gatewaytest/test_chmod.py::TestChmodGroup::testChmod PASSED [ 52%]
03:28:58 test/integration/gatewaytest/test_chmod.py::TestCustomUsers::testReadOnly PASSED [ 52%]
03:29:00 test/integration/gatewaytest/test_chmod.py::TestCustomUsers::testReadAnnotate PASSED [ 52%]
03:29:02 test/integration/gatewaytest/test_chmod.py::TestCustomUsers::testGroupMinusOne PASSED [ 52%]
03:29:03 test/integration/gatewaytest/test_chmod.py::TestCustomUsers::testReadWrite PASSED [ 53%]
03:29:05 test/integration/gatewaytest/test_chmod.py::TestCustomUsers::testDelete8723 PASSED [ 53%]
03:29:08 test/integration/gatewaytest/test_chmod.py::TestManualCreateEdit::testReadOnly PASSED [ 53%]
03:29:09 test/integration/gatewaytest/test_chmod.py::Test8800::testWithBlitzWrappers PASSED [ 53%]
03:29:11 test/integration/gatewaytest/test_chmod.py::Test8800::testWithoutWrappers PASSED [ 53%]
03:29:14 test/integration/gatewaytest/test_chmod.py::TestDefaultSetup::testAuthorCanEdit PASSED [ 53%]
03:29:21 test/integration/gatewaytest/test_chown.py::TestChown::test_chown_project PASSED [ 53%]
03:29:26 test/integration/gatewaytest/test_chown.py::TestChown::test_chown_pdi PASSED [ 53%]
03:29:28 test/integration/gatewaytest/test_config_service.py::testInterpolateSetting[foo] PASSED [ 53%]
03:29:30 test/integration/gatewaytest/test_config_service.py::testInterpolateSetting[False] PASSED [ 53%]
03:29:32 test/integration/gatewaytest/test_config_service.py::testInterpolateSetting[false] PASSED [ 53%]
03:29:35 test/integration/gatewaytest/test_config_service.py::testInterpolateSetting[True] PASSED [ 53%]
03:29:37 test/integration/gatewaytest/test_config_service.py::testInterpolateSetting[true] PASSED [ 53%]
03:29:39 test/integration/gatewaytest/test_config_service.py::testInterpolateSetting[] PASSED [ 53%]
03:29:42 test/integration/gatewaytest/test_config_service.py::testInterpolateSetting[None] PASSED [ 53%]
03:29:50 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testMultiProcessSession PASSED [ 53%]
03:31:59 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testClose ERROR [ 53%]
03:34:10 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testTopLevelObjects ERROR [ 53%]
03:34:10 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testCloseSession PASSED [ 53%]
03:34:10 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testMiscellaneous PASSED [ 53%]
03:34:10 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testConnectUsingClient PASSED [ 54%]
03:34:11 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testConnectUsingClientNoSessionWithIdentity PASSED [ 54%]
03:34:11 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testConnectUsingClientSessionWithoutIdentity PASSED [ 54%]
03:34:12 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testSessionId PASSED [ 54%]
03:34:12 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testConnectWithSessionId PASSED [ 54%]
03:34:12 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testSecureWithSecureClient PASSED [ 54%]
03:34:12 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testSecureWithUnsecureClient PASSED [ 54%]
03:34:13 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testSecureWithUsername[None] PASSED [ 54%]
03:34:13 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testSecureWithUsername[False] PASSED [ 54%]
03:34:13 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testSecureWithUsername[True] PASSED [ 54%]
03:34:13 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testSecureMisMatch PASSED [ 54%]
03:34:14 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testHost PASSED [ 54%]
03:34:15 test/integration/gatewaytest/test_delete.py::TestDelete::testDeleteObjectsUnwrapped PASSED [ 54%]
03:34:16 test/integration/gatewaytest/test_delete.py::TestDelete::testDeleteObjects PASSED [ 54%]
03:34:16 test/integration/gatewaytest/test_delete.py::TestDelete::testDeleteObjectsWait PASSED [ 54%]
03:34:16 test/integration/gatewaytest/test_delete.py::TestDelete::testDeleteObjectsDryRun PASSED [ 54%]
03:34:16 test/integration/gatewaytest/test_delete.py::TestDelete::testDeleteAnnotatedFileAnnotation PASSED [ 54%]
03:34:17 test/integration/gatewaytest/test_delete.py::TestDelete::testDeleteObjectDirect PASSED [ 54%]
03:34:18 test/integration/gatewaytest/test_fs.py::TestFileset::testCountArchivedFiles PASSED [ 54%]
03:34:19 test/integration/gatewaytest/test_fs.py::TestFileset::testCountFilesetFiles PASSED [ 54%]
03:34:19 test/integration/gatewaytest/test_fs.py::TestFileset::testCountImportedImageFiles PASSED [ 55%]
03:34:19 test/integration/gatewaytest/test_fs.py::TestFileset::testGetImportedFilesInfo PASSED [ 55%]
03:34:19 test/integration/gatewaytest/test_fs.py::TestFileset::testGetImportedFilesInfoWithAnnotations PASSED [ 55%]
03:34:19 test/integration/gatewaytest/test_fs.py::TestFileset::testGetArchivedFiles PASSED [ 55%]
03:34:19 test/integration/gatewaytest/test_fs.py::TestFileset::testGetImportedImageFiles PASSED [ 55%]
03:34:19 test/integration/gatewaytest/test_fs.py::TestFileset::testGetArchivedFilesInfo PASSED [ 55%]
03:34:19 test/integration/gatewaytest/test_fs.py::TestFileset::testGetFilesetFilesInfo PASSED [ 55%]
03:34:19 test/integration/gatewaytest/test_fs.py::TestFileset::testGetFilesetFilesInfoWithAnnotations PASSED [ 55%]
03:34:19 test/integration/gatewaytest/test_fs.py::TestFileset::testGetFilesetFilesInfoMultiple PASSED [ 55%]
03:34:19 test/integration/gatewaytest/test_fs.py::TestFileset::testGetFilesetFilesInfoMultipleWithAnnotations PASSED [ 55%]
03:34:19 test/integration/gatewaytest/test_fs.py::TestFileset::testGetFileset PASSED [ 55%]
03:34:20 test/integration/gatewaytest/test_fs.py::TestFileset::testGetImportedImageFilePaths PASSED [ 55%]
03:34:21 test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testCountArchivedFiles PASSED [ 55%]
03:34:21 test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testCountFilesetFiles PASSED [ 55%]
03:34:22 test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testCountImportedImageFiles PASSED [ 55%]
03:34:22 test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testGetImportedFilesInfo PASSED [ 55%]
03:34:22 test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testGetArchivedFiles PASSED [ 55%]
03:34:22 test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testGetImportedImageFiles PASSED [ 55%]
03:34:22 test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testGetArchivedFilesInfo PASSED [ 55%]
03:34:22 test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testGetFilesetFilesInfo PASSED [ 55%]
03:34:22 test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testGetFilesetFilesInfoMultiple PASSED [ 56%]
03:34:22 test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testGetFileset PASSED [ 56%]
03:34:23 test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testGetImportedImageFilePaths PASSED [ 56%]
03:34:24 test/integration/gatewaytest/test_get_objects.py::TestDeleteObject::testDeleteAnnotation PASSED [ 56%]
03:34:26 test/integration/gatewaytest/test_get_objects.py::TestDeleteObject::testDeleteImage PASSED [ 56%]
03:34:27 test/integration/gatewaytest/test_get_objects.py::TestFindObject::testIllegalObjTypeInt PASSED [ 56%]
03:34:27 test/integration/gatewaytest/test_get_objects.py::TestFindObject::testObjTypeUnicode PASSED [ 56%]
03:34:27 test/integration/gatewaytest/test_get_objects.py::TestFindObject::testObjTypeString PASSED [ 56%]
03:34:27 test/integration/gatewaytest/test_get_objects.py::TestFindObject::testFindProject PASSED [ 56%]
03:36:37 test/integration/gatewaytest/test_get_objects.py::TestFindObject::testFindExperimenter ERROR [ 56%]
03:36:38 test/integration/gatewaytest/test_get_objects.py::TestFindObject::testFindAnnotation PASSED [ 56%]
03:36:42 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testSearchObjects PASSED [ 56%]
03:36:42 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testListProjects PASSED [ 56%]
03:36:42 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testPagination PASSED [ 56%]
03:36:42 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetDatasetsByProject PASSED [ 56%]
03:36:47 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testListExperimentersAndGroups[True] PASSED [ 56%]
03:36:50 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testListExperimentersAndGroups[False] PASSED [ 56%]
03:36:50 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testListColleagues PASSED [ 56%]
03:36:52 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testFindExperimenterWithGroups PASSED [ 56%]
03:36:57 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetExperimentersByGroup[True] PASSED [ 56%]
03:37:01 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetExperimentersByGroup[False] PASSED [ 56%]
03:37:04 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetExperimenter PASSED [ 57%]
03:39:13 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetAnnotations ERROR [ 57%]
03:41:24 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetImage ERROR [ 57%]
03:43:35 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetImageLoadPixels[True-True] ERROR [ 57%]
03:45:46 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetImageLoadPixels[True-False] ERROR [ 57%]
03:47:57 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetImageLoadPixels[False-True] ERROR [ 57%]
03:50:08 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetImageLoadPixels[False-False] ERROR [ 57%]
03:50:08 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetProject PASSED [ 57%]
03:52:19 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testTraversal ERROR [ 57%]
03:52:20 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testListOrphans[False0-True] PASSED [ 57%]
03:52:21 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testListOrphans[False0-False] PASSED [ 57%]
03:52:21 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testListOrphans[False1-True] PASSED [ 57%]
03:52:22 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testListOrphans[False1-False] PASSED [ 57%]
03:52:22 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testOrderById PASSED [ 57%]
03:52:22 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetObjectsByMapAnnotations[Image] FAILED [ 57%]
03:52:23 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetObjectsByMapAnnotations[Dataset] FAILED [ 57%]
03:52:23 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetObjectsByMapAnnotations[Project] FAILED [ 57%]
03:52:23 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetObjectsByMapAnnotations[Screen] FAILED [ 57%]
03:52:24 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetObjectsByMapAnnotations[Plate] FAILED [ 57%]
03:52:27 test/integration/gatewaytest/test_get_objects.py::TestLeaderAndMemberOfGroup::testGetGroupsLeaderOfAsLeader PASSED [ 57%]
03:52:28 test/integration/gatewaytest/test_get_objects.py::TestLeaderAndMemberOfGroup::testGetGroupsLeaderOfAsMember PASSED [ 58%]
03:52:30 test/integration/gatewaytest/test_get_objects.py::TestLeaderAndMemberOfGroup::testGetGroupsMemberOf PASSED [ 58%]
03:52:31 test/integration/gatewaytest/test_get_objects.py::TestLeaderAndMemberOfGroup::testGroupSummaryAsOwner PASSED [ 58%]
03:52:31 test/integration/gatewaytest/test_get_objects.py::TestLeaderAndMemberOfGroup::testGroupSummaryAsMember PASSED [ 58%]
03:52:32 test/integration/gatewaytest/test_get_objects.py::TestLeaderAndMemberOfGroup::testGroupSummaryAsOwnerDeprecated PASSED [ 58%]
03:52:34 test/integration/gatewaytest/test_get_objects.py::TestLeaderAndMemberOfGroup::testGroupSummaryAsMemberDeprecated PASSED [ 58%]
03:52:36 test/integration/gatewaytest/test_get_objects.py::TestListParents::testSupportedObjects PASSED [ 58%]
03:52:38 test/integration/gatewaytest/test_get_objects.py::TestListParents::testListParentsPDI PASSED [ 58%]
03:52:41 test/integration/gatewaytest/test_get_objects.py::TestListParents::testListParentsSPW PASSED [ 58%]
03:52:44 test/integration/gatewaytest/test_get_objects.py::TestListParents::testExperimenterListParents PASSED [ 58%]
03:52:44 test/integration/gatewaytest/test_helpers.py::TestHelperObjects::testColorHolder PASSED [ 58%]
03:52:44 test/integration/gatewaytest/test_helpers.py::TestHelperObjects::testOmeroType PASSED [ 58%]
03:52:44 test/integration/gatewaytest/test_helpers.py::TestHelperObjects::testSplitHTMLColor PASSED [ 58%]
03:54:55 test/integration/gatewaytest/test_image.py::TestImage::testThumbnail ERROR [ 58%]
03:57:06 test/integration/gatewaytest/test_image.py::TestImage::testThumbnailSet ERROR [ 58%]
03:59:17 test/integration/gatewaytest/test_image.py::TestImage::testRenderingModels ERROR [ 58%]
04:01:28 test/integration/gatewaytest/test_image.py::TestImage::testSplitChannel ERROR [ 58%]
04:03:39 test/integration/gatewaytest/test_image.py::TestImage::testLinePlots ERROR [ 58%]
04:05:50 test/integration/gatewaytest/test_image.py::TestImage::testProjections ERROR [ 58%]
04:08:01 test/integration/gatewaytest/test_image.py::TestImage::testProperties ERROR [ 58%]
04:10:12 test/integration/gatewaytest/test_image.py::TestImage::testPixelSizeUnits ERROR [ 59%]
04:12:24 test/integration/gatewaytest/test_image.py::TestImage::testUnitsGetValue ERROR [ 59%]
04:14:34 test/integration/gatewaytest/test_image.py::TestImage::testChannelWavelengthUnits ERROR [ 59%]
04:16:45 test/integration/gatewaytest/test_image.py::TestImage::testExposureTimeUnits ERROR [ 59%]
04:18:57 test/integration/gatewaytest/test_image.py::TestImage::testShortname ERROR [ 59%]
04:21:08 test/integration/gatewaytest/test_image.py::TestImage::testImageDate ERROR [ 59%]
04:23:19 test/integration/gatewaytest/test_image.py::TestImage::testSimpleMarshal ERROR [ 59%]
04:25:30 test/integration/gatewaytest/test_image.py::TestImage::testExport ERROR [ 59%]
04:27:41 test/integration/gatewaytest/test_image.py::TestImage::testRenderJpegRegion ERROR [ 59%]
04:29:52 test/integration/gatewaytest/test_image.py::TestImage::testRenderJpegRegion_resolution ERROR [ 59%]
04:32:03 test/integration/gatewaytest/test_image.py::TestImage::testRenderJpegRegion_invalid_resolution ERROR [ 59%]
04:34:14 test/integration/gatewaytest/test_image.py::TestImage::testRenderBirdsEyeView ERROR [ 59%]
04:36:26 test/integration/gatewaytest/test_image.py::TestImage::testRenderBirdsEyeView_Size ERROR [ 59%]
04:36:27 test/integration/gatewaytest/test_image_wrapper.py::TestImageWrapper::testGetDate PASSED [ 59%]
04:36:27 test/integration/gatewaytest/test_image_wrapper.py::TestImageWrapper::testGetDateNoAcquisitionDate PASSED [ 59%]
04:36:27 test/integration/gatewaytest/test_image_wrapper.py::TestImageWrapper::testSimpleMarshal PASSED [ 59%]
04:36:30 test/integration/gatewaytest/test_image_wrapper.py::TestImageWrapper::testChannelLabel PASSED [ 59%]
04:36:30 test/integration/gatewaytest/test_image_wrapper.py::TestImageWrapper::testChannelEmissionWaveLabel PASSED [ 59%]
04:36:31 test/integration/gatewaytest/test_image_wrapper.py::TestImageWrapper::testChannelNoLabel PASSED [ 59%]
04:36:33 test/integration/gatewaytest/test_missing_pyramid.py::TestPyramid::testThrowException PASSED [ 59%]
04:36:33 test/integration/gatewaytest/test_missing_pyramid.py::TestPyramid::testPrepareRenderingEngine PASSED [ 60%]
04:36:33 test/integration/gatewaytest/test_missing_pyramid.py::TestPyramid::testGetChannels PASSED [ 60%]
04:36:33 test/integration/gatewaytest/test_missing_pyramid.py::TestPyramid::testGetChannelsNoRe PASSED [ 60%]
04:36:34 test/integration/gatewaytest/test_missing_pyramid.py::TestPyramid::testGetRdefId PASSED [ 60%]
04:36:39 test/integration/gatewaytest/test_permissions.py::TestPrivileges::test_update_admin_privileges PASSED [ 60%]
04:36:43 test/integration/gatewaytest/test_permissions.py::TestPrivileges::test_full_admin_privileges PASSED [ 60%]
04:38:53 test/integration/gatewaytest/test_pixels.py::TestPixels::testReuseRawPixelsStore ERROR [ 60%]
04:41:04 test/integration/gatewaytest/test_pixels.py::TestPixels::testPlaneInfo ERROR [ 60%]
04:43:15 test/integration/gatewaytest/test_pixels.py::TestPixels::testPixelsType ERROR [ 60%]
04:45:26 test/integration/gatewaytest/test_pixels.py::TestPixels::testGetTile ERROR [ 60%]
04:47:37 test/integration/gatewaytest/test_pixels.py::TestPixels::testGetPlane ERROR [ 60%]
04:49:48 test/integration/gatewaytest/test_pixels.py::TestPixels::testGetPlanesExceptionOnGetPlane ERROR [ 60%]
04:51:59 test/integration/gatewaytest/test_pixels.py::TestPixels::testGetPlanesExceptionOnClose ERROR [ 60%]
04:54:10 test/integration/gatewaytest/test_pixels.py::TestPixels::testGetPlanesExceptionOnBoth ERROR [ 60%]
04:56:22 test/integration/gatewaytest/test_pixels.py::TestPixels::testGetHistogram ERROR [ 60%]
04:56:24 test/integration/gatewaytest/test_plate_wrapper.py::TestPlateWrapper::testGetGridSize PASSED [ 60%]
04:58:36 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testDefault ERROR [ 60%]
05:00:47 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testCustomized ERROR [ 60%]
05:02:58 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testChannelWindows ERROR [ 60%]
05:05:10 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testFloatDefaultMinMax ERROR [ 60%]
05:07:21 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testEmissionWave ERROR [ 60%]
05:09:32 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testBatchCopy ERROR [ 61%]
05:11:43 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testGroupBasedPermissions ERROR [ 61%]
05:13:54 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testGetRdefs ERROR [ 61%]
05:16:05 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testResetDefaults ERROR [ 61%]
05:18:16 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testQuantizationSettings ERROR [ 61%]
05:20:27 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testQuantizationSettingsInvalid ERROR [ 61%]
05:22:38 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testQuantizationSettingsBulk ERROR [ 61%]
05:24:49 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testGetChannelsNoRE ERROR [ 61%]
05:27:00 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testSetActiveChannelsNoRE ERROR [ 61%]
05:29:12 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testSetActiveChannelsWithRE ERROR [ 61%]
05:31:22 test/integration/gatewaytest/test_rdefs.py::TestRDefs::test_set_active_channels_set_inactive[True] ERROR [ 61%]
05:33:33 test/integration/gatewaytest/test_rdefs.py::TestRDefs::test_set_active_channels_set_inactive[False] ERROR [ 61%]
05:35:45 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testUnregisterService ERROR [ 61%]
05:37:56 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testRegisterService ERROR [ 61%]
05:40:07 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testCloseRE ERROR [ 61%]
05:40:09 test/integration/gatewaytest/test_search_objects.py::TestGetObject::testSearchObjects PASSED [ 61%]
05:40:11 test/integration/gatewaytest/test_services.py::TestServices::testDeleteServiceAuthor PASSED [ 61%]
05:40:13 test/integration/gatewaytest/test_services.py::TestServices::testDeleteServiceAdmin PASSED [ 61%]
05:40:17 test/integration/gatewaytest/test_services.py::TestTables::testTableRead PASSED [ 61%]
05:40:22 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rw_root_dirTrue_grpTrue_16 PASSED [ 61%]
05:40:24 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rw_root_dirTrue_grpTrue_96 PASSED [ 62%]
05:40:27 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rw_root_dirTrue_grpFalse_16 PASSED [ 62%]
05:40:29 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rw_root_dirTrue_grpFalse_96 PASSED [ 62%]
05:40:32 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rw_root_dirFalse_grpTrue_16 PASSED [ 62%]
05:40:35 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rw_root_dirFalse_grpTrue_96 PASSED [ 62%]
05:40:37 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rw_root_dirFalse_grpFalse_16 PASSED [ 62%]
05:40:40 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rw_root_dirFalse_grpFalse_96 PASSED [ 62%]
05:40:42 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_root_dirTrue_grpTrue_16 PASSED [ 62%]
05:40:45 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_root_dirTrue_grpTrue_96 PASSED [ 62%]
05:40:47 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_root_dirTrue_grpFalse_16 PASSED [ 62%]
05:40:50 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_root_dirTrue_grpFalse_96 PASSED [ 62%]
05:40:52 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_root_dirFalse_grpTrue_16 PASSED [ 62%]
05:40:55 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_root_dirFalse_grpTrue_96 PASSED [ 62%]
05:40:57 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_root_dirFalse_grpFalse_16 PASSED [ 62%]
05:40:59 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_root_dirFalse_grpFalse_96 PASSED [ 62%]
05:41:04 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_member_dirTrue_grpTrue_16 PASSED [ 62%]
05:41:09 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_member_dirTrue_grpTrue_96 PASSED [ 62%]
05:41:13 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_member_dirTrue_grpFalse_16 PASSED [ 62%]
05:41:18 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_member_dirTrue_grpFalse_96 PASSED [ 62%]
05:41:23 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_member_dirFalse_grpTrue_16 PASSED [ 62%]
05:41:27 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_member_dirFalse_grpTrue_96 PASSED [ 63%]
05:41:32 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_member_dirFalse_grpFalse_16 PASSED [ 63%]
05:41:37 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_member_dirFalse_grpFalse_96 PASSED [ 63%]
05:41:38 test/integration/gatewaytest/test_user.py::TestUser::testUsers PASSED [ 63%]
05:43:48 test/integration/gatewaytest/test_user.py::TestUser::testSaveAs FAILED [ 63%]
05:43:51 test/integration/gatewaytest/test_user.py::TestUser::testCrossGroupSave PASSED [ 63%]
05:44:02 test/integration/gatewaytest/test_user.py::TestUser::testGroupOverObjPermissions PASSED [ 63%]
05:46:15 test/integration/gatewaytest/test_wrapper.py::TestWrapper::testAllObjectsWrapped ERROR [ 63%]
05:46:16 test/integration/gatewaytest/test_wrapper.py::TestWrapper::testProjectWrapper PASSED [ 63%]
05:48:26 test/integration/gatewaytest/test_wrapper.py::TestWrapper::testDatasetWrapper ERROR [ 63%]
05:48:26 test/integration/gatewaytest/test_wrapper.py::TestWrapper::testExperimenterWrapper PASSED [ 63%]
05:50:37 test/integration/gatewaytest/test_wrapper.py::TestWrapper::testDetailsWrapper ERROR [ 63%]
05:50:38 test/integration/gatewaytest/test_wrapper.py::TestWrapper::testOriginalFileWrapperGetFileInChunks PASSED [ 63%]
05:50:38 test/integration/gatewaytest/test_wrapper.py::TestWrapper::testOriginalFileWrapperAsFileObj PASSED [ 63%]
05:50:38 test/integration/gatewaytest/test_wrapper.py::TestWrapper::testOriginalFileWrapperAsFileObjContextManager PASSED [ 63%]
05:50:38 test/integration/gatewaytest/test_wrapper.py::TestWrapper::testOriginalFileWrapperAsFileObjMultiple PASSED [ 63%]
05:50:38 test/integration/gatewaytest/test_wrapper.py::TestWrapper::testSetters PASSED [ 63%]
05:50:39 test/integration/gatewaytest/test_wrapper.py::TestWrapper::testOther PASSED [ 63%]
05:50:41 test/integration/metadata/test_metadata_mapannotations.py::TestMapAnnotationManager::test_add_from_namespace_query PASSED [ 63%]
05:50:41 test/integration/metadata/test_metadata_mapannotations.py::TestMapAnnotationManager::test_add_from_namespace_query_duplicate PASSED [ 63%]
05:50:41 test/integration/metadata/test_metadata_mapannotations.py::TestMapAnnotationManager::test_update_existing_mapann PASSED [ 64%]
05:50:44 test/integration/metadata/test_populate.py::TestPopulateMetadataConfigLoad::test_get_config_local PASSED [ 64%]
05:50:44 test/integration/metadata/test_populate.py::TestPopulateMetadataConfigLoad::test_get_config_remote PASSED [ 64%]
05:50:59 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[None-Screen2Plates] PASSED [ 64%]
05:51:04 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[None-Plate2Wells] PASSED [ 64%]
05:51:08 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[None-Dataset2Images] PASSED [ 64%]
05:51:12 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[None-Dataset2Images1Missing] PASSED [ 64%]
05:51:22 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[None-Dataset101Images] PASSED [ 64%]
05:51:30 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[None-Project2Datasets] PASSED [ 64%]
05:51:34 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[None-GZIP] PASSED [ 64%]
05:51:34 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[1-Screen2Plates] PASSED [ 64%]
05:51:35 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[1-Plate2Wells] PASSED [ 64%]
05:51:35 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[1-Dataset2Images] PASSED [ 64%]
05:51:36 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[1-Dataset2Images1Missing] PASSED [ 64%]
05:51:41 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[1-Dataset101Images] PASSED [ 64%]
05:51:42 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[1-Project2Datasets] PASSED [ 64%]
05:51:42 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[1-GZIP] PASSED [ 64%]
05:51:43 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[10-Screen2Plates] PASSED [ 64%]
05:51:43 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[10-Plate2Wells] PASSED [ 64%]
05:51:44 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[10-Dataset2Images] PASSED [ 64%]
05:51:44 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[10-Dataset2Images1Missing] PASSED [ 64%]
05:51:46 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[10-Dataset101Images] PASSED [ 65%]
05:51:47 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[10-Project2Datasets] PASSED [ 65%]
05:51:47 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[10-GZIP] PASSED [ 65%]
05:51:53 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadataNsAnns[Plate2WellsNs] PASSED [ 65%]
05:51:58 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadataNsAnns[Plate2WellsNs2] PASSED [ 65%]
05:52:03 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadataNsAnnsUnavailableHeader PASSED [ 65%]
05:52:08 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadataNsAnnsFail PASSED [ 65%]
05:52:20 test/integration/metadata/test_populate.py::TestPopulateMetadataDedup::testPopulateMetadataNsAnnsDedup[None] PASSED [ 65%]
05:52:32 test/integration/metadata/test_populate.py::TestPopulateMetadataDedup::testPopulateMetadataNsAnnsDedup[openmicroscopy.org/omero/bulk_annotations] PASSED [ 65%]
05:52:44 test/integration/metadata/test_populate.py::TestPopulateMetadataDedup::testPopulateMetadataNsAnnsDedup[openmicroscopy.org/mapr/gene] PASSED [ 65%]
05:52:57 test/integration/metadata/test_populate.py::TestPopulateMetadataDedup::testPopulateMetadataNsAnnsDedupDelete[None] PASSED [ 65%]
05:53:10 test/integration/metadata/test_populate.py::TestPopulateMetadataDedup::testPopulateMetadataNsAnnsDedupDelete[openmicroscopy.org/omero/bulk_annotations] PASSED [ 65%]
05:53:22 test/integration/metadata/test_populate.py::TestPopulateMetadataDedup::testPopulateMetadataNsAnnsDedupDelete[openmicroscopy.org/mapr/gene] PASSED [ 65%]
05:53:29 test/integration/metadata/test_populate.py::TestPopulateMetadataConfigFiles::test_delete_attach[True-None] PASSED [ 65%]
05:53:36 test/integration/metadata/test_populate.py::TestPopulateMetadataConfigFiles::test_delete_attach[True-openmicroscopy.org/omero/bulk_annotations] PASSED [ 65%]
05:53:42 test/integration/metadata/test_populate.py::TestPopulateMetadataConfigFiles::test_delete_attach[True-openmicroscopy.org/omero/bulk_annotations/config] PASSED [ 65%]
05:53:49 test/integration/metadata/test_populate.py::TestPopulateMetadataConfigFiles::test_delete_attach[False-None] PASSED [ 65%]
05:53:56 test/integration/metadata/test_populate.py::TestPopulateMetadataConfigFiles::test_delete_attach[False-openmicroscopy.org/omero/bulk_annotations] PASSED [ 65%]
05:54:02 test/integration/metadata/test_populate.py::TestPopulateMetadataConfigFiles::test_delete_attach[False-openmicroscopy.org/omero/bulk_annotations/config] PASSED [ 65%]
05:54:09 test/integration/metadata/test_populate.py::TestPopulateRois::testPopulateRoisPlate PASSED [ 65%]
05:54:11 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_get_format_filename_yaml[yaml] PASSED [ 66%]
05:54:11 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_get_format_filename_yaml[Yml] PASSED [ 66%]
05:54:11 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_get_format_filename_json[json] PASSED [ 66%]
05:54:11 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_get_format_filename_json[JS] PASSED [ 66%]
05:54:11 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_get_format_originalfileid_yaml[format0] PASSED [ 66%]
05:54:11 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_get_format_originalfileid_yaml[format1] PASSED [ 66%]
05:54:11 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_get_format_originalfileid_yaml[format2] PASSED [ 66%]
05:54:12 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_get_format_originalfileid_json[format0] PASSED [ 66%]
05:54:12 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_get_format_originalfileid_json[format1] PASSED [ 66%]
05:54:12 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_get_format_originalfileid_json[format2] PASSED [ 66%]
05:54:12 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_load[json-True] PASSED [ 66%]
05:54:12 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_load[json-False] PASSED [ 66%]
05:54:12 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_load[yaml-True] PASSED [ 66%]
05:54:12 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_load[yaml-False] PASSED [ 66%]
05:54:12 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_load_fromstring PASSED [ 66%]
05:54:12 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_load_invalidtype PASSED [ 66%]
05:54:12 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_dump[json] PASSED [ 66%]
05:54:12 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_dump[yaml] PASSED [ 66%]
05:54:14 test/integration/scriptsharness/test_harness.py::TestScriptsViaOmeroCli::testDefinition PASSED [ 66%]
05:54:15 test/integration/scriptsharness/test_harness.py::TestScriptsViaOmeroCli::testSimpleScript PASSED [ 66%]
05:54:32 test/integration/scriptstest/test_cli.py::TestCLI::testCLI PASSED [ 67%]
05:54:35 test/integration/scriptstest/test_coverage.py::TestCoverage::testGetScriptWithDetails PASSED [ 67%]
05:54:45 test/integration/scriptstest/test_coverage.py::TestCoverage::testUploadAndScript PASSED [ 67%]
05:54:45 test/integration/scriptstest/test_coverage.py::TestCoverage::testUserCantUploadOfficalScript PASSED [ 67%]
05:55:03 test/integration/scriptstest/test_inputs.py::TestInputs::testInputs PASSED [ 67%]
05:55:07 test/integration/scriptstest/test_ping.py::TestPing::testPingViaISCript PASSED [ 67%]
05:55:08 test/integration/scriptstest/test_ping.py::TestPing::testPingParametersViaISCript PASSED [ 67%]
05:55:09 test/integration/scriptstest/test_ping.py::TestPing::testPingStdout PASSED [ 67%]
05:55:16 test/integration/scriptstest/test_ping.py::TestPing::testProcessShutdown PASSED [ 67%]
05:55:17 test/integration/scriptstest/test_ping.py::TestPing::testProcessShutdownOneway PASSED [ 67%]
05:55:18 test/integration/scriptstest/test_ping.py::TestPing::testProcessorGetResultsBeforeFinished PASSED [ 67%]
05:55:19 test/integration/scriptstest/test_ping.py::TestPing::testProcessorExpires PASSED [ 67%]
05:55:20 test/integration/scriptstest/test_ping.py::TestPing::testProcessorGetJob PASSED [ 67%]
05:55:21 test/integration/scriptstest/test_ping.py::TestPing::testProcessorStop PASSED [ 67%]
05:55:22 test/integration/scriptstest/test_ping.py::TestPing::testProcessorDetach PASSED [ 67%]
05:55:39 test/integration/scriptstest/test_rand.py::TestRand::testRand PASSED [ 67%]
05:55:41 test/integration/scriptstest/test_repo.py::TestScriptRepo::testScriptRepo PASSED [ 67%]
05:55:41 test/integration/scriptstest/test_repo.py::TestScriptRepo::testGetOfficialScripts PASSED [ 67%]
05:55:51 test/integration/scriptstest/test_repo.py::TestScriptRepo::testGetUserScripts PASSED [ 67%]
05:55:51 test/integration/scriptstest/test_repo.py::TestScriptRepo::testCantUndulyLoadScriptRepoFromUuid PASSED [ 67%]
05:55:51 test/integration/scriptstest/test_repo.py::TestScriptRepo::testMultipleScriptPathsNotSupported PASSED [ 68%]
05:55:51 test/integration/scriptstest/test_repo.py::TestScriptRepo::testUploadingViaOfficialScriptShowsUpInRepo PASSED [ 68%]
05:55:51 test/integration/scriptstest/test_repo.py::TestScriptRepo::testUploadingViaNonOfficialScriptDoesntShowUpInRepo PASSED [ 68%]
05:55:56 test/integration/scriptstest/test_roi_handling_utils.py::TestRoiHandlingUtils::test_get_line_data PASSED [ 68%]
05:56:02 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_split_image PASSED [ 68%]
05:56:04 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_numpy_to_image PASSED [ 68%]
05:56:06 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_convert_numpy_array PASSED [ 68%]
05:56:09 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_numpy_save_as_image[True-tiff] Exception ignored in: <function _TemporaryFileCloser.__del__ at 0x7eff427a1a60>
05:56:09 Traceback (most recent call last):
05:56:09 File "/usr/lib64/python3.9/tempfile.py", line 461, in __del__
05:56:09 self.close()
05:56:09 File "/usr/lib64/python3.9/tempfile.py", line 457, in close
05:56:09 unlink(self.name)
05:56:09 FileNotFoundError: [Errno 2] No such file or directory: '/tmp/tmpuy_u6pq0.tiff'
05:56:09 PASSED [ 68%]
05:56:12 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_numpy_save_as_image[True-foo] Exception ignored in: <function _TemporaryFileCloser.__del__ at 0x7eff427a1a60>
05:56:12 Traceback (most recent call last):
05:56:12 File "/usr/lib64/python3.9/tempfile.py", line 461, in __del__
05:56:12 self.close()
05:56:12 File "/usr/lib64/python3.9/tempfile.py", line 457, in close
05:56:12 unlink(self.name)
05:56:12 FileNotFoundError: [Errno 2] No such file or directory: '/tmp/tmpr8nckafp.foo'
05:56:12 PASSED [ 68%]
05:56:14 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_numpy_save_as_image[False-tiff] PASSED [ 68%]
05:56:17 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_numpy_save_as_image[False-foo] PASSED [ 68%]
05:56:17 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_create_file[] PASSED [ 68%]
05:56:17 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_create_file[text/x-python] PASSED [ 68%]
05:56:17 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_calc_sha1 PASSED [ 68%]
05:56:17 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_upload_file PASSED [ 68%]
05:56:17 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_download_file PASSED [ 68%]
05:56:19 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_get_objects PASSED [ 68%]
05:56:22 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_download_plane PASSED [ 68%]
05:56:25 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_upload_plane_by_row PASSED [ 68%]
05:56:27 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_upload_plane PASSED [ 68%]
05:56:30 test/integration/tablestest/test_backwards_compatibility.py::TestBackwardsCompatibility_4_4_5::testCreateAllColumns_4_4_5 PASSED [ 68%]
05:56:32 test/integration/tablestest/test_backwards_compatibility.py::TestBackwardsCompatibility_4_4_5::testAllColumns_4_4_5 PASSED [ 69%]
05:56:33 test/integration/tablestest/test_backwards_compatibility.py::TestBackwardsCompatibility_4_4_5::testMetadataException PASSED [ 69%]
05:56:36 test/integration/tablestest/test_backwards_compatibility.py::TestBackwardsCompatibility_5_3_4::testCreateAllColumnsAndMetadata_5_3_4 PASSED [ 69%]
05:56:38 test/integration/tablestest/test_backwards_compatibility.py::TestBackwardsCompatibility_5_3_4::testAllColumnsAndMetadata_5_3_4 PASSED [ 69%]
05:56:41 test/integration/tablestest/test_populate_metadata.py::TestPopulateMetadata::testPopulateMetadataPlate PASSED [ 69%]
05:56:43 test/integration/tablestest/test_service.py::TestTables::testBlankTable PASSED [ 69%]
05:56:43 test/integration/tablestest/test_service.py::TestTables::testUpdate PASSED [ 69%]
05:56:43 test/integration/tablestest/test_service.py::TestTables::testTicket2175 PASSED [ 69%]
05:56:43 test/integration/tablestest/test_service.py::TestTables::testMask PASSED [ 69%]
05:56:43 test/integration/tablestest/test_service.py::TestTables::test2855MetadataMethods PASSED [ 69%]
05:56:49 test/integration/tablestest/test_service.py::TestTables::test2910 PASSED [ 69%]
05:56:52 test/integration/tablestest/test_service.py::TestTables::testDelete PASSED [ 69%]
05:56:52 test/integration/tablestest/test_service.py::TestTables::test3714GetWhereListVars PASSED [ 69%]
05:56:52 test/integration/tablestest/test_service.py::TestTables::test4000TableRead PASSED [ 69%]
05:56:54 test/integration/tablestest/test_service.py::TestTables::testCallContext PASSED [ 69%]
05:56:54 test/integration/tablestest/test_service.py::TestTables::testGetHeaders PASSED [ 69%]
05:57:00 test/integration/tablestest/test_service.py::TestTables::test10049openTableUnreadable PASSED [ 69%]
05:57:00 test/integration/tablestest/test_service.py::TestTables::test9971checkStringLength PASSED [ 69%]
05:57:00 test/integration/tablestest/test_service.py::TestTables::testArrayColumn PASSED [ 69%]
05:57:00 test/integration/tablestest/test_service.py::TestTables::testArrayColumnSize1 PASSED [ 69%]
05:57:00 test/integration/tablestest/test_service.py::TestTables::testAllColumnsSameTable PASSED [ 70%]
05:57:00 test/integration/tablestest/test_service.py::TestTables::test10431uninitialisedTableReadWrite PASSED [ 70%]
05:57:00 test/integration/tablestest/test_service.py::TestTables::test12606fileSizeCheck PASSED [ 70%]
05:57:00 test/integration/tablestest/test_service.py::TestTables::testCantWriteInternalMetadata[data0] PASSED [ 70%]
05:57:00 test/integration/tablestest/test_service.py::TestTables::testCantWriteInternalMetadata[data1] PASSED [ 70%]
05:57:01 test/integration/tablestest/test_service.py::TestTables::testCanWriteAlmostInternalMetadata[data0] PASSED [ 70%]
05:57:01 test/integration/tablestest/test_service.py::TestTables::testCanWriteAlmostInternalMetadata[data1] PASSED [ 70%]
05:57:01 test/integration/tablestest/test_service.py::TestTables::testCanReadInternalMetadata PASSED [ 70%]
05:57:01 test/integration/tablestest/test_service.py::TestTables::testColumnSpaceNames PASSED [ 70%]
05:57:01 test/integration/tablestest/test_service.py::TestTables::testIncludeRowNumbersSlice PASSED [ 70%]
05:57:01 test/integration/tablestest/test_service.py::TestTables::testIncludeRowNumbersReadCoordinates PASSED [ 70%]
05:57:01 test/integration/tablestest/test_service.py::TestTables::testIncludeRowNumbersRead PASSED [ 70%]
05:57:01 test/integration/tablestest/test_service.py::TestTables::testSliceOrdering PASSED [ 70%]
05:57:01 test/integration/tablestest/test_service.py::TestTables::testReadCoordinatesOrdering PASSED [ 70%]
05:57:01 test/integration/tablestest/test_service.py::TestTables::testSliceEmptyInput PASSED [ 70%]
05:57:02 test/integration/tablestest/test_service.py::TestTables::testReadCoordinatesInvalidInput PASSED [ 70%]
05:57:02 test/integration/tablestest/test_service.py::TestTables::testReadInvalidInput PASSED [ 70%]
05:57:02 test/integration/tablestest/test_service.py::TestTables::testSliceInvalidInput PASSED [ 70%]
05:57:02 test/integration/tablestest/test_service.py::TestTables::testReadStartEnd PASSED [ 70%]
05:57:02 test/integration/tablestest/test_service.py::TestTables::testReadStartGreaterThanEnd PASSED [ 70%]
05:57:02 test/integration/tablestest/test_service.py::TestTables::testAddData PASSED [ 71%]
05:57:02 test/integration/tablestest/test_service.py::TestTables::testUpdateFirstRow PASSED [ 71%]
05:57:02 test/integration/tablestest/test_service.py::TestTables::testUpdateMultipleRows PASSED [ 71%]
05:57:02 test/integration/tablestest/test_service.py::TestTables::testUpdateAllows PASSED [ 71%]
05:57:03 test/integration/tablestest/test_service.py::TestTables::testCannotUpdateOutOfRange PASSED [ 71%]
05:57:06 test/integration/tablestest/test_tables.py::TestTableIntegrity::testAllColumnsAndMetadata PASSED [ 71%]
05:57:13 test/integration/test_admin.py::TestAdmin::testGetGroup PASSED [ 71%]
05:57:13 test/integration/test_admin.py::TestAdmin::testSetGroup PASSED [ 71%]
05:57:15 test/integration/test_admin.py::TestAdmin::testChangePassword PASSED [ 71%]
05:57:15 test/integration/test_admin.py::TestAdmin::testGetEventContext4011 PASSED [ 71%]
05:57:18 test/integration/test_admin.py::TestAdmin::testUserRoles4056 PASSED [ 71%]
05:57:21 test/integration/test_admin.py::TestAdmin::testSetSecurityPassword PASSED [ 71%]
05:57:23 test/integration/test_annotation.py::TestFigureExportScripts::testAddAnnotations PASSED [ 71%]
05:57:36 test/integration/test_annotationPermissions.py::TestPrivateGroup::testAddTag PASSED [ 71%]
05:57:37 test/integration/test_annotationPermissions.py::TestPrivateGroup::testReadTag PASSED [ 71%]
05:57:38 test/integration/test_annotationPermissions.py::TestPrivateGroup::testRemoveTag PASSED [ 71%]
05:57:50 test/integration/test_annotationPermissions.py::TestReadOnlyGroup::testAddTag PASSED [ 71%]
05:57:51 test/integration/test_annotationPermissions.py::TestReadOnlyGroup::testReadTag PASSED [ 71%]
05:57:52 test/integration/test_annotationPermissions.py::TestReadOnlyGroup::testRemoveTag PASSED [ 71%]
05:58:05 test/integration/test_annotationPermissions.py::TestReadAnnotateGroup::testAddTag PASSED [ 71%]
05:58:05 test/integration/test_annotationPermissions.py::TestReadAnnotateGroup::testReadTag PASSED [ 72%]
05:58:06 test/integration/test_annotationPermissions.py::TestReadAnnotateGroup::testRemoveTag PASSED [ 72%]
05:58:19 test/integration/test_annotationPermissions.py::TestMovePrivatePermissions::testAddTagMakePrivate[root] PASSED [ 72%]
05:58:19 test/integration/test_annotationPermissions.py::TestMovePrivatePermissions::testAddTagMakePrivate[admin] PASSED [ 72%]
05:58:20 test/integration/test_annotationPermissions.py::TestMovePrivatePermissions::testAddTagMakePrivate[owner] PASSED [ 72%]
05:58:29 test/integration/test_chgrp.py::TestChgrp::testChgrpImportedImage PASSED [ 72%]
05:58:31 test/integration/test_chgrp.py::TestChgrp::testChgrpImage PASSED [ 72%]
05:58:34 test/integration/test_chgrp.py::TestChgrp::testChgrpPDI PASSED [ 72%]
05:58:43 test/integration/test_chgrp.py::TestChgrp::testChgrpRdef7825 PASSED [ 72%]
05:58:50 test/integration/test_chgrp.py::TestChgrp::testChgrpOneImageFilesetErr PASSED [ 72%]
05:58:56 test/integration/test_chgrp.py::TestChgrp::testChgrpAllImagesFilesetOK PASSED [ 72%]
05:59:02 test/integration/test_chgrp.py::TestChgrp::testChgrpAllImagesFilesetTwoCommandsErr PASSED [ 72%]
05:59:08 test/integration/test_chgrp.py::TestChgrp::testChgrpOneDatasetFilesetErr PASSED [ 72%]
05:59:15 test/integration/test_chgrp.py::TestChgrp::testChgrpAllDatasetsFilesetOK PASSED [ 72%]
05:59:20 test/integration/test_chgrp.py::TestChgrp::testChgrpOneDatasetFilesetOK PASSED [ 72%]
05:59:30 test/integration/test_chgrp.py::TestChgrp::testChgrpImagesTwoFilesetsErr PASSED [ 72%]
05:59:43 test/integration/test_chgrp.py::TestChgrp::testChgrpDatasetTwoFilesetsErr PASSED [ 72%]
05:59:49 test/integration/test_chgrp.py::TestChgrp::testChgrpDatasetCheckFsGroup PASSED [ 72%]
05:59:55 test/integration/test_chgrp.py::TestChgrp::testChgrpFilesetOK PASSED [ 72%]
06:00:01 test/integration/test_chgrp.py::TestChgrp::testChgrp11000 PASSED [ 72%]
06:00:03 test/integration/test_chgrp.py::TestChgrp::testChgrp11109 PASSED [ 72%]
06:00:06 test/integration/test_chgrp.py::TestChgrp::testChgrpDatasetWithImage PASSED [ 73%]
06:00:08 test/integration/test_chgrp.py::TestChgrp::testChgrpPDIReverseLinkOrder PASSED [ 73%]
06:00:11 test/integration/test_chgrp.py::TestChgrp::testChgrpTwoDatasetsLinkedToSingleImageDefault PASSED [ 73%]
06:00:13 test/integration/test_chgrp.py::TestChgrp::testChgrpTwoDatasetsLinkedToSingleImageHard PASSED [ 73%]
06:00:16 test/integration/test_chgrp.py::TestChgrp::testChgrpProjectWithDatasetLinkedToImageWithOtherDatasetDefault PASSED [ 73%]
06:00:19 test/integration/test_chgrp.py::TestChgrp::testChgrpProjectWithDatasetLinkedToImageWithOtherDatasetHard PASSED [ 73%]
06:00:21 test/integration/test_chgrp.py::TestChgrp::testChgrpDatasetWithImageLinkedToTwoProjects PASSED [ 73%]
06:00:23 test/integration/test_chgrp.py::TestChgrp::testChgrpProjectLinkedToDatasetAndImageDefault PASSED [ 73%]
06:00:26 test/integration/test_chgrp.py::TestChgrp::testChgrpProjectLinkedToDatasetAndImageHard PASSED [ 73%]
06:00:28 test/integration/test_chgrp.py::TestChgrp::testChgrpProjectLinkedToDatasetDefault PASSED [ 73%]
06:00:31 test/integration/test_chgrp.py::TestChgrp::testChgrpProjectLinkedToDatasetHard PASSED [ 73%]
06:00:33 test/integration/test_chgrp.py::TestChgrp::testChgrpProjectLinkedToTwoDatasetsAndImage PASSED [ 73%]
06:00:50 test/integration/test_chgrp.py::TestChgrp::testIntergroupLinks PASSED [ 73%]
06:00:58 test/integration/test_chgrp.py::TestChgrpTarget::testChgrpImageToTargetDataset PASSED [ 73%]
06:01:05 test/integration/test_chgrp.py::TestChgrpTarget::testChgrpMifImagesToTargetDataset PASSED [ 73%]
06:01:11 test/integration/test_chgrp.py::TestChgrpTarget::testChgrpImageToTargetDatasetAndBackNoDS PASSED [ 73%]
06:01:18 test/integration/test_chgrp.py::TestChgrpTarget::testChgrpImageToTargetDatasetAndBackDS PASSED [ 73%]
06:01:20 test/integration/test_chgrp.py::TestChgrpTarget::testChgrpDatasetToTargetProject[user] PASSED [ 73%]
06:01:23 test/integration/test_chgrp.py::TestChgrpTarget::testChgrpDatasetToTargetProject[admin] PASSED [ 73%]
06:01:30 test/integration/test_chmod.py::TestChmodEasy::test_chmod_rw_rwr PASSED [ 73%]
06:01:37 test/integration/test_chown.py::TestChown::test_chown_project PASSED [ 74%]
06:01:42 test/integration/test_chown.py::TestChown::test_chown_pdi PASSED [ 74%]
06:01:45 test/integration/test_client_ctors.py::TestClientConstructors::testHostConstructor PASSED [ 74%]
06:01:45 test/integration/test_client_ctors.py::TestClientConstructors::testEmptyInitializationDataConstructor PASSED [ 74%]
06:01:45 test/integration/test_client_ctors.py::TestClientConstructors::testInitializationDataConstructor PASSED [ 74%]
06:01:45 test/integration/test_client_ctors.py::TestClientConstructors::testMainArgsConstructor PASSED [ 74%]
06:01:45 test/integration/test_client_ctors.py::TestClientConstructors::testMapConstructor PASSED [ 74%]
06:01:45 test/integration/test_client_ctors.py::TestClientConstructors::testMainArgsGetsIcePrefix PASSED [ 74%]
06:01:45 test/integration/test_client_ctors.py::TestClientConstructors::testMainArgsGetsIceConfig PASSED [ 74%]
06:01:47 test/integration/test_client_ctors.py::TestClientConstructors::testTwoDifferentHosts PASSED [ 74%]
06:01:47 test/integration/test_client_ctors.py::TestClientConstructors::testPorts PASSED [ 74%]
06:01:48 test/integration/test_client_ctors.py::TestClientConstructors::testBlockSize PASSED [ 74%]
06:01:48 test/integration/test_client_ctors.py::TestClientConstructors::testPythonCtorRepair PASSED [ 74%]
06:01:52 test/integration/test_clientusage.py::TestClientUsage::testClientClosedAutomatically PASSED [ 74%]
06:01:54 test/integration/test_clientusage.py::TestClientUsage::testClientClosedManually PASSED [ 74%]
06:01:57 test/integration/test_clientusage.py::TestClientUsage::testUseSharedMemory PASSED [ 74%]
06:02:00 test/integration/test_clientusage.py::TestClientUsage::testCreateInsecureClientTicket2099 PASSED [ 74%]
06:02:00 test/integration/test_clientusage.py::TestClientUsage::testGetStatefulServices PASSED [ 74%]
06:02:05 test/integration/test_cmdcallback.py::TestCmdCallback::testTimingFinishesOnLatch PASSED [ 74%]
06:02:09 test/integration/test_cmdcallback.py::TestCmdCallback::testTimingFinishesOnBlock PASSED [ 74%]
06:02:12 test/integration/test_cmdcallback.py::TestCmdCallback::testTimingFinishesOnLoop PASSED [ 75%]
06:02:15 test/integration/test_cmdcallback.py::TestCmdCallback::testDoNothingFinishesOnLatch PASSED [ 75%]
06:02:17 test/integration/test_cmdcallback.py::TestCmdCallback::testDoNothingFinishesOnLoop PASSED [ 75%]
06:02:19 test/integration/test_cmdcallback.py::TestCmdCallback::testDoAllTimingFinishesOnLoop PASSED [ 75%]
06:02:22 test/integration/test_counts.py::TestCounts::testBasicUsage PASSED [ 75%]
06:02:24 test/integration/test_delete.py::TestDelete::testBasicUsage PASSED [ 75%]
06:02:25 test/integration/test_delete.py::TestDelete::testDeleteMany PASSED [ 75%]
06:02:25 test/integration/test_delete.py::TestDelete::testDeleteProjectWithoutContent PASSED [ 75%]
06:02:25 test/integration/test_delete.py::TestDelete::testCheckIfDeleted PASSED [ 75%]
06:02:26 test/integration/test_delete.py::TestDelete::testCheckIfDeleted2 PASSED [ 75%]
06:02:27 test/integration/test_delete.py::TestDelete::testOddMessage PASSED [ 75%]
06:02:27 test/integration/test_delete.py::TestDelete::testDeleteComment PASSED [ 75%]
06:02:29 test/integration/test_delete.py::TestDelete::test3639 PASSED [ 75%]
06:02:30 test/integration/test_delete.py::TestDelete::test5793 PASSED [ 75%]
06:02:30 test/integration/test_delete.py::TestDelete::test7314 PASSED [ 75%]
06:02:33 test/integration/test_delete.py::TestDelete::testDeleteOneDatasetFilesetErr PASSED [ 75%]
06:02:37 test/integration/test_delete.py::TestDelete::testDeleteOneImageFilesetErr PASSED [ 75%]
06:02:40 test/integration/test_delete.py::TestDelete::testDeleteDatasetFilesetOK PASSED [ 75%]
06:02:44 test/integration/test_delete.py::TestDelete::testDeleteAllDatasetsFilesetOK PASSED [ 75%]
06:02:47 test/integration/test_delete.py::TestDelete::testDeleteAllImagesFilesetOK PASSED [ 75%]
06:02:51 test/integration/test_delete.py::TestDelete::testDeleteFilesetOK PASSED [ 76%]
06:02:58 test/integration/test_delete.py::TestDelete::testDeleteImagesTwoFilesetsErr PASSED [ 76%]
06:03:08 test/integration/test_delete.py::TestDelete::testDeleteDatasetTwoFilesetsErr PASSED [ 76%]
06:03:08 test/integration/test_delete.py::TestDelete::testDeleteProjectWithOneEmptyDataset PASSED [ 76%]
06:03:08 test/integration/test_delete.py::TestDelete::testDeleteProjectWithEmptyDatasetLinkedToAnotherProjectDefault PASSED [ 76%]
06:03:08 test/integration/test_delete.py::TestDelete::testDeleteProjectWithEmptyDatasetLinkedToAnotherProjectHard PASSED [ 76%]
06:03:08 test/integration/test_delete.py::TestDelete::testDeleteProjectWithDatasetLinkedToAnotherProject PASSED [ 76%]
06:03:08 test/integration/test_delete.py::TestDelete::testDeleteDatasetLinkedToTwoProjects PASSED [ 76%]
06:03:08 test/integration/test_delete.py::TestDelete::testDeleteDatasetWithImageLinkedToAnotherDatasetDefault PASSED [ 76%]
06:03:08 test/integration/test_delete.py::TestDelete::testDeleteDatasetWithImageLinkedToAnotherDatasetHard PASSED [ 76%]
06:03:08 test/integration/test_delete.py::TestDelete::testStepsDuringDelete PASSED [ 76%]
06:03:11 test/integration/test_exporter.py::TestExporter::testBasic PASSED [ 76%]
06:03:16 test/integration/test_exporter.py::TestExporter::test6713 PASSED [ 76%]
06:03:19 test/integration/test_files.py::TestFiles::testUploadDownload PASSED [ 76%]
06:03:19 test/integration/test_files.py::TestFiles::test_download_null_size PASSED [ 76%]
06:03:21 test/integration/test_iconfig.py::TestConfig::testValuesRegex[data0] PASSED [ 76%]
06:03:21 test/integration/test_iconfig.py::TestConfig::testValuesRegex[data1] PASSED [ 76%]
06:03:21 test/integration/test_iconfig.py::TestConfig::testValuesRegex[data2] PASSED [ 76%]
06:03:21 test/integration/test_iconfig.py::TestConfig::testValuesRegex[data3] PASSED [ 76%]
06:03:21 test/integration/test_iconfig.py::TestConfig::testDefaults PASSED [ 76%]
06:03:21 test/integration/test_iconfig.py::TestConfig::testRootDefaults PASSED [ 76%]
06:03:21 test/integration/test_iconfig.py::TestConfig::testClientDefaults PASSED [ 77%]
06:03:21 test/integration/test_iconfig.py::TestConfig::testClientValues PASSED [ 77%]
06:03:23 test/integration/test_icontainer.py::TestIContainer::testFindAnnotations PASSED [ 77%]
06:03:28 test/integration/test_icontainer.py::TestIContainer::testFindAndCountAnnotationsForSharedData PASSED [ 77%]
06:03:29 test/integration/test_icontainer.py::TestIContainer::testCreateAfterBlitzPort PASSED [ 77%]
06:03:34 test/integration/test_icontainer.py::TestSplitFilesets::testFilesetSplitByImage PASSED [ 77%]
06:03:38 test/integration/test_icontainer.py::TestSplitFilesets::testFilesetNotSplitByImage PASSED [ 77%]
06:03:41 test/integration/test_icontainer.py::TestSplitFilesets::testFilesetSplitByDatasetAndProject PASSED [ 77%]
06:03:45 test/integration/test_icontainer.py::TestSplitFilesets::testFilesetNotSplitByDatasets PASSED [ 77%]
06:03:45 test/integration/test_icontainer.py::TestSplitFilesets::testGetImagesBySplitFilesetsManyCases PASSED [ 77%]
06:03:48 test/integration/test_ildap.py::TestILdap::testLookupLdapExperimentersViaAdmin PASSED [ 77%]
06:03:51 test/integration/test_imetadata.py::TestIMetadata::testLoadAnnotations3671 PASSED [ 77%]
06:03:51 test/integration/test_imetadata.py::TestIMetadata::testLoadAnnotationsUsedNotOwned3671 PASSED [ 77%]
06:03:51 test/integration/test_imetadata.py::TestIMetadata::testCountAnnotationsUsedNotOwned3671 PASSED [ 77%]
06:03:51 test/integration/test_imetadata.py::TestIMetadata::testCountSpecifiedAnnotations3671 PASSED [ 77%]
06:03:51 test/integration/test_imetadata.py::TestIMetadata::testLoadSpecifiedAnnotations3671 PASSED [ 77%]
06:04:04 test/integration/test_iquery.py::TestQuery::testGetPixelsCount PASSED [ 77%]
06:04:04 test/integration/test_iquery.py::TestQuery::testQueryTaggedUnique PASSED [ 77%]
06:04:04 test/integration/test_iquery.py::TestQuery::testClassType PASSED [ 77%]
06:04:07 test/integration/test_isession.py::TestISession::testBasicUsage PASSED [ 77%]
06:04:09 test/integration/test_isession.py::TestISession::testManuallyClosingOwnSession PASSED [ 78%]
06:04:09 test/integration/test_isession.py::TestISession::testCreateSessionForUser PASSED [ 78%]
06:04:12 test/integration/test_isession.py::TestISession::testJoinSession_Helper PASSED [ 78%]
06:04:14 test/integration/test_isession.py::TestISession::testJoinSession PASSED [ 78%]
06:04:14 test/integration/test_isession.py::TestISession::testUpdateSessions[who0] PASSED [ 78%]
06:04:14 test/integration/test_isession.py::TestISession::testUpdateSessions[who1] PASSED [ 78%]
06:04:14 test/integration/test_isession.py::TestISession::testUpdateSessions[who2] PASSED [ 78%]
06:04:14 test/integration/test_isession.py::TestISession::testUpdateSessions[who3] PASSED [ 78%]
06:04:15 test/integration/test_isession.py::TestISession::testUpdateSessionsNonAdminDisabling PASSED [ 78%]
06:04:15 test/integration/test_isession.py::TestISession::testCreateSessionForGuest PASSED [ 78%]
06:04:17 test/integration/test_isession.py::TestISession::test1018CreationDestructionClosing PASSED [ 78%]
06:04:19 test/integration/test_isession.py::TestISession::testSimpleDestruction PASSED [ 78%]
06:04:19 test/integration/test_isession.py::TestISession::testGetMySessionsTicket1975 PASSED [ 78%]
06:04:19 test/integration/test_isession.py::TestISession::testTicket2196SetSecurityContext PASSED [ 78%]
06:04:19 test/integration/test_isession.py::TestISession::testManageMySessions PASSED [ 78%]
06:04:19 test/integration/test_isession.py::TestISession::testSessionWithIP[127.0.0.1] PASSED [ 78%]
06:04:19 test/integration/test_isession.py::TestISession::testSessionWithIP[2400:cb00:2048:1::6814:55] PASSED [ 78%]
06:04:19 test/integration/test_isession.py::TestISession::testSessionWithIP[1234:5678:1234:5678:1234:5678:121.212.121.212] PASSED [ 78%]
06:04:19 test/integration/test_isession.py::TestISession::testCreateUserSession PASSED [ 78%]
06:04:19 test/integration/test_isession.py::TestISession::testCreateUserSessionFromSudo[True] PASSED [ 78%]
06:04:19 test/integration/test_isession.py::TestISession::testCreateUserSessionFromSudo[False] PASSED [ 79%]
06:04:22 test/integration/test_ishare.py::TestIShare::test_that_permissions_are_default_private PASSED [ 79%]
06:04:25 test/integration/test_ishare.py::TestIShare::test_basic_usage PASSED [ 79%]
06:04:27 test/integration/test_ishare.py::TestIShare::test_canDoAction[canEdit] PASSED [ 79%]
06:04:29 test/integration/test_ishare.py::TestIShare::test_canDoAction[canAnnotate] PASSED [ 79%]
06:04:32 test/integration/test_ishare.py::TestIShare::test_canDoAction[canDelete] PASSED [ 79%]
06:04:34 test/integration/test_ishare.py::TestIShare::test_canDoAction[canLink] PASSED [ 79%]
06:04:36 test/integration/test_ishare.py::TestIShare::test8118 PASSED [ 79%]
06:04:41 test/integration/test_ishare.py::TestIShare::test1154 PASSED [ 79%]
06:04:45 test/integration/test_ishare.py::TestIShare::testCanAnnotate PASSED [ 79%]
06:04:50 test/integration/test_ishare.py::TestIShare::test1157 PASSED [ 79%]
06:04:51 test/integration/test_ishare.py::TestIShare::test1179 PASSED [ 79%]
06:04:55 test/integration/test_ishare.py::TestIShare::test1201 PASSED [ 79%]
06:04:57 test/integration/test_ishare.py::TestIShare::test1201b PASSED [ 79%]
06:05:05 test/integration/test_ishare.py::TestIShare::test1207 PASSED [ 79%]
06:05:07 test/integration/test_ishare.py::TestIShare::test1227 PASSED [ 79%]
06:05:12 test/integration/test_ishare.py::TestIShare::test2327 PASSED [ 79%]
06:05:16 test/integration/test_ishare.py::TestIShare::test2733 PASSED [ 79%]
06:05:28 test/integration/test_ishare.py::TestIShare::test2733Access PASSED [ 79%]
06:05:36 test/integration/test_ishare.py::TestIShare::test3214 PASSED [ 79%]
06:05:36 test/integration/test_ishare.py::TestIShare::test5711 PASSED [ 80%]
06:05:38 test/integration/test_ishare.py::TestIShare::test5756Raw PASSED [ 80%]
06:05:41 test/integration/test_ishare.py::TestIShare::test5756Wrapped PASSED [ 80%]
06:05:45 test/integration/test_ishare.py::TestIShare::test5851 PASSED [ 80%]
06:05:45 test/integration/test_ishare.py::TestIShare::test2513 PASSED [ 80%]
06:05:50 test/integration/test_ishare.py::TestIShare::test_OS_regular_user PASSED [ 80%]
06:05:58 test/integration/test_ishare.py::TestIShare::test_OS_non_member PASSED [ 80%]
06:06:03 test/integration/test_ishare.py::TestIShare::test_OS_admin_user PASSED [ 80%]
06:06:03 test/integration/test_ishare.py::TestIShare::test_bad_share PASSED [ 80%]
06:06:07 test/integration/test_ishare.py::TestIShare::test8513 PASSED [ 80%]
06:06:13 test/integration/test_ishare.py::TestIShare::test8704 PASSED [ 80%]
06:06:19 test/integration/test_ishare.py::TestIShare::test13018 PASSED [ 80%]
06:06:21 test/integration/test_itimeline.py::TestITimeline::testGeneral PASSED [ 80%]
06:06:24 test/integration/test_itimeline.py::TestITimeline::testCollaborativeTimeline PASSED [ 80%]
06:06:27 test/integration/test_itimeline.py::TestITimeline::test1173 PASSED [ 80%]
06:06:27 test/integration/test_itimeline.py::TestITimeline::test1175 PASSED [ 80%]
06:06:27 test/integration/test_itimeline.py::TestITimeline::test3234 PASSED [ 80%]
06:06:29 test/integration/test_itypes.py::TestTypes::testGetEnumerationTypes PASSED [ 80%]
06:06:29 test/integration/test_itypes.py::TestTypes::testAllEnumerations PASSED [ 80%]
06:06:30 test/integration/test_itypes.py::TestTypes::testGetEnumerationWithEntries PASSED [ 80%]
06:06:30 test/integration/test_itypes.py::TestTypes::testManageEnumeration PASSED [ 80%]
06:06:32 test/integration/test_iupdate.py::TestIUpdate::testSaveArray PASSED [ 81%]
06:06:32 test/integration/test_iupdate.py::TestIUpdate::testSaveCollection PASSED [ 81%]
06:06:32 test/integration/test_iupdate.py::TestIUpdate::testExternalInfoOnCreation PASSED [ 81%]
06:06:32 test/integration/test_iupdate.py::TestIUpdate::testExternalInfoAfterCreationTransient PASSED [ 81%]
06:06:32 test/integration/test_iupdate.py::TestIUpdate::testExternalInfoAfterCreationManaged PASSED [ 81%]
06:06:32 test/integration/test_iupdate.py::TestIUpdate::testExternalInfoNewInstance PASSED [ 81%]
06:06:32 test/integration/test_iupdate.py::TestIUpdate::testExternalInfoNullInstance PASSED [ 81%]
06:06:32 test/integration/test_iupdate.py::TestIUpdate::testExternalInfoUpdateInstance PASSED [ 81%]
06:06:33 test/integration/test_iupdate.py::TestIUpdate::testCannotSaveDeleted PASSED [ 81%]
06:06:37 test/integration/test_librarytest.py::TestLibrary::test9188 PASSED [ 81%]
06:06:41 test/integration/test_mail.py::TestMail::testEveryone PASSED [ 81%]
06:06:43 test/integration/test_mail.py::TestMail::testUserAdd PASSED [ 81%]
06:06:49 test/integration/test_mail.py::TestMail::testComment PASSED [ 81%]
06:06:52 test/integration/test_mapannotation.py::TestMapAnnotation::testMapStringField PASSED [ 81%]
06:06:52 test/integration/test_mapannotation.py::TestMapAnnotation::testGroupConfigA[data0] PASSED [ 81%]
06:06:52 test/integration/test_mapannotation.py::TestMapAnnotation::testGroupConfigA[data1] PASSED [ 81%]
06:06:52 test/integration/test_mapannotation.py::TestMapAnnotation::testGroupConfigEdit PASSED [ 81%]
06:06:52 test/integration/test_mapannotation.py::TestMapAnnotation::testEmptyItem PASSED [ 81%]
06:06:52 test/integration/test_mapannotation.py::TestMapAnnotation::testBigKeys PASSED [ 81%]
06:06:55 test/integration/test_metadatastore.py::TestMetadataStore::testBasicUsage PASSED [ 81%]
06:06:55 test/integration/test_metadatastore.py::TestMetadataStore::testMetadataService PASSED [ 82%]
06:07:01 test/integration/test_model51.py::TestModel51::testExposureTime PASSED [ 82%]
06:07:05 test/integration/test_model51.py::TestModel51::testPhysicalSize PASSED [ 82%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[YOTTAMETER] PASSED [ 82%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[ZETTAMETER] PASSED [ 82%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[EXAMETER] PASSED [ 82%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[PETAMETER] PASSED [ 82%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[TERAMETER] PASSED [ 82%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[GIGAMETER] PASSED [ 82%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[MEGAMETER] PASSED [ 82%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[KILOMETER] PASSED [ 82%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[HECTOMETER] PASSED [ 82%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[DECAMETER] PASSED [ 82%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[METER] PASSED [ 82%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[DECIMETER] PASSED [ 82%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[CENTIMETER] PASSED [ 82%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[MILLIMETER] PASSED [ 82%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[MICROMETER] PASSED [ 82%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[NANOMETER] PASSED [ 82%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[PICOMETER] PASSED [ 82%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[FEMTOMETER] PASSED [ 83%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[ATTOMETER] PASSED [ 83%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[ZEPTOMETER] PASSED [ 83%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[YOCTOMETER] PASSED [ 83%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[ANGSTROM] PASSED [ 83%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[ASTRONOMICALUNIT] PASSED [ 83%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[LIGHTYEAR] PASSED [ 83%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[PARSEC] PASSED [ 83%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[THOU] PASSED [ 83%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[LINE] PASSED [ 83%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[INCH] PASSED [ 83%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[FOOT] PASSED [ 83%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[YARD] PASSED [ 83%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[MILE] PASSED [ 83%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[POINT] PASSED [ 83%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[PIXEL] PASSED [ 83%]
06:07:05 test/integration/test_model51.py::TestModel51::testAllLengths[REFERENCEFRAME] PASSED [ 83%]
06:07:05 test/integration/test_model51.py::TestModel51::testAsMapMethod PASSED [ 83%]
06:07:05 test/integration/test_model51.py::TestModel51::testMapEagerFetch PASSED [ 83%]
06:07:10 test/integration/test_model51.py::TestModel51::testMapSecurity PASSED [ 83%]
06:07:14 test/integration/test_model51.py::TestModel51::testUnitProjections PASSED [ 84%]
06:07:17 test/integration/test_permissions.py::TestPermissions::testLoginToPublicGroupTicket1940 PASSED [ 84%]
06:07:20 test/integration/test_permissions.py::TestPermissions::testLinkingInPrivateGroup PASSED [ 84%]
06:07:20 test/integration/test_permissions.py::TestPermissions::testCreatAndUpdatePrivateGroup PASSED [ 84%]
06:07:20 test/integration/test_permissions.py::TestPermissions::testCreatAndUpdatePublicGroupReadOnly PASSED [ 84%]
06:07:20 test/integration/test_permissions.py::TestPermissions::testCreatAndUpdatePublicGroupReadAnnotate PASSED [ 84%]
06:07:20 test/integration/test_permissions.py::TestPermissions::testCreatAndUpdatePublicGroup PASSED [ 84%]
06:07:20 test/integration/test_permissions.py::TestPermissions::testCreatGroupAndchangePermissions PASSED [ 84%]
06:07:23 test/integration/test_permissions.py::TestPermissions::testGroupOwners PASSED [ 84%]
06:07:23 test/integration/test_permissions.py::TestPermissions::testSearchAllGroups PASSED [ 84%]
06:07:26 test/integration/test_permissions.py::TestPermissions::testOGContextParameter PASSED [ 84%]
06:07:29 test/integration/test_permissions.py::TestPermissions::testOGSetImplicitContext PASSED [ 84%]
06:07:31 test/integration/test_permissions.py::TestPermissions::testOGSetProxyContext PASSED [ 84%]
06:07:33 test/integration/test_permissions.py::TestPermissions::testOGSetSecurityContext PASSED [ 84%]
06:07:36 test/integration/test_permissions.py::TestPermissions::testOGArg PASSED [ 84%]
06:07:39 test/integration/test_permissions.py::TestPermissions::testSaveWithNegOneNotExplicit PASSED [ 84%]
06:07:44 test/integration/test_permissions.py::TestPermissions::testPrivateGroupCallContext PASSED [ 84%]
06:07:45 test/integration/test_permissions.py::TestPermissions::testAdminCanQueryWithGroupMinusOneTicket9632 PASSED [ 84%]
06:07:49 test/integration/test_permissions.py::TestPermissions::testOmeroUserAsAdmin PASSED [ 84%]
06:07:54 test/integration/test_permissions.py::TestPermissions::testOmeroUserAsNonAdmin PASSED [ 84%]
06:07:54 test/integration/test_permissions.py::TestPermissions::testImmutablePermissions PASSED [ 84%]
06:07:54 test/integration/test_permissions.py::TestPermissions::testDisallow PASSED [ 85%]
06:07:55 test/integration/test_permissions.py::TestPermissions::testClientSet PASSED [ 85%]
06:07:57 test/integration/test_permissions.py::TestPermissions::testAdminUseOfRawPixelsBean PASSED [ 85%]
06:08:00 test/integration/test_permissions.py::TestPermissions::testUseOfRawFileBeanScriptReadGroupMinusOne PASSED [ 85%]
06:08:02 test/integration/test_permissions.py::TestPermissions::testUseOfRawFileBeanScriptReadCorrectGroup PASSED [ 85%]
06:08:10 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rw-----admin-admin] PASSED [ 85%]
06:08:15 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rw-----admin-owner] PASSED [ 85%]
06:08:19 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rw-----admin-member] PASSED [ 85%]
06:08:25 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rw-----owner-admin] PASSED [ 85%]
06:08:29 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rw-----owner-owner] PASSED [ 85%]
06:08:35 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rw-----owner-member] PASSED [ 85%]
06:08:39 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rw-----member-admin] PASSED [ 85%]
06:08:44 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rw-----member-owner] PASSED [ 85%]
06:08:49 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rw-----member-member] PASSED [ 85%]
06:08:54 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwr----admin-admin] PASSED [ 85%]
06:08:59 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwr----admin-owner] PASSED [ 85%]
06:09:03 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwr----admin-member] PASSED [ 85%]
06:09:08 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwr----owner-admin] PASSED [ 85%]
06:09:13 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwr----owner-owner] PASSED [ 85%]
06:09:18 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwr----owner-member] PASSED [ 85%]
06:09:22 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwr----member-admin] PASSED [ 86%]
06:09:28 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwr----member-owner] PASSED [ 86%]
06:09:33 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwr----member-member] PASSED [ 86%]
06:09:37 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwra---admin-admin] PASSED [ 86%]
06:09:42 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwra---admin-owner] PASSED [ 86%]
06:09:47 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwra---admin-member] PASSED [ 86%]
06:09:52 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwra---owner-admin] PASSED [ 86%]
06:09:57 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwra---owner-owner] PASSED [ 86%]
06:10:02 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwra---owner-member] PASSED [ 86%]
06:10:07 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwra---member-admin] PASSED [ 86%]
06:10:13 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwra---member-owner] PASSED [ 86%]
06:10:18 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwra---member-member] PASSED [ 86%]
06:10:23 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwrw---admin-admin] PASSED [ 86%]
06:10:28 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwrw---admin-owner] PASSED [ 86%]
06:10:33 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwrw---admin-member] PASSED [ 86%]
06:10:38 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwrw---owner-admin] PASSED [ 86%]
06:10:43 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwrw---owner-owner] PASSED [ 86%]
06:10:48 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwrw---owner-member] PASSED [ 86%]
06:10:54 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwrw---member-admin] PASSED [ 86%]
06:10:59 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwrw---member-owner] PASSED [ 86%]
06:11:04 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwrw---member-member] PASSED [ 87%]
06:11:10 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rw-----admin-admin] PASSED [ 87%]
06:11:15 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rw-----admin-owner] PASSED [ 87%]
06:11:19 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rw-----admin-member] PASSED [ 87%]
06:11:25 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rw-----owner-admin] PASSED [ 87%]
06:11:31 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rw-----owner-owner] PASSED [ 87%]
06:11:36 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rw-----owner-member] PASSED [ 87%]
06:11:41 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rw-----member-admin] PASSED [ 87%]
06:11:47 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rw-----member-owner] PASSED [ 87%]
06:11:51 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rw-----member-member] PASSED [ 87%]
06:11:57 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwr----admin-admin] PASSED [ 87%]
06:12:02 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwr----admin-owner] PASSED [ 87%]
06:12:07 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwr----admin-member] PASSED [ 87%]
06:12:12 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwr----owner-admin] PASSED [ 87%]
06:12:18 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwr----owner-owner] PASSED [ 87%]
06:12:23 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwr----owner-member] PASSED [ 87%]
06:12:28 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwr----member-admin] PASSED [ 87%]
06:12:33 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwr----member-owner] PASSED [ 87%]
06:12:39 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwr----member-member] PASSED [ 87%]
06:12:43 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwra---admin-admin] PASSED [ 87%]
06:12:49 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwra---admin-owner] PASSED [ 88%]
06:12:54 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwra---admin-member] PASSED [ 88%]
06:12:59 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwra---owner-admin] PASSED [ 88%]
06:13:05 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwra---owner-owner] PASSED [ 88%]
06:13:10 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwra---owner-member] PASSED [ 88%]
06:13:15 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwra---member-admin] PASSED [ 88%]
06:13:21 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwra---member-owner] PASSED [ 88%]
06:13:25 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwra---member-member] PASSED [ 88%]
06:13:31 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwrw---admin-admin] PASSED [ 88%]
06:13:36 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwrw---admin-owner] PASSED [ 88%]
06:13:41 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwrw---admin-member] PASSED [ 88%]
06:13:47 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwrw---owner-admin] PASSED [ 88%]
06:13:52 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwrw---owner-owner] PASSED [ 88%]
06:13:57 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwrw---owner-member] PASSED [ 88%]
06:14:02 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwrw---member-admin] PASSED [ 88%]
06:14:07 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwrw---member-owner] PASSED [ 88%]
06:14:13 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwrw---member-member] PASSED [ 88%]
06:14:13 test/integration/test_permissions.py::TestPermissionProjections::testExtendedRestrictions[PlateI] SKIPPED [ 88%]
06:14:13 test/integration/test_permissions.py::TestPermissionProjections::testExtendedRestrictions[WellI] SKIPPED [ 88%]
06:14:13 test/integration/test_permissions.py::TestPermissionProjections::testExtendedRestrictions[ImageI] SKIPPED [ 88%]
06:14:13 test/integration/test_permissions.py::TestPermissionProjections::testExtendedRestrictions[FileAnnotationI] SKIPPED [ 88%]
06:14:15 test/integration/test_pixelsService.py::TestPixelsService::test9655 PASSED [ 89%]
06:14:18 test/integration/test_rawfilestore.py::TestRFS::testNullSize11743 PASSED [ 89%]
06:14:18 test/integration/test_rawfilestore.py::TestRFS::testGetFileId PASSED [ 89%]
06:14:23 test/integration/test_rawpixelsstore.py::TestRPS::testTicket4737WithClose PASSED [ 89%]
06:14:26 test/integration/test_rawpixelsstore.py::TestRPS::testTicket4737WithSave PASSED [ 89%]
06:14:29 test/integration/test_rawpixelsstore.py::TestRPS::testTicket4737WithForEachTile PASSED [ 89%]
06:14:34 test/integration/test_rawpixelsstore.py::TestRPS::testBigPlane PASSED [ 89%]
06:14:46 test/integration/test_rawpixelsstore.py::TestRPS::testRomioToPyramid PASSED [ 89%]
06:14:58 test/integration/test_rawpixelsstore.py::TestRPS::test2RomioToPyramidWithNegOne PASSED [ 89%]
06:15:20 test/integration/test_rawpixelsstore.py::TestRPS::testPyramidConcurrentAccess PASSED [ 89%]
06:15:29 test/integration/test_rawpixelsstore.py::TestTiles::testTiles PASSED [ 89%]
06:15:47 test/integration/test_reimport.py::TestReimportArchivedFiles::testConvertSynthetic PASSED [ 89%]
06:15:50 test/integration/test_render.py::TestRendering::test_render_region PASSED [ 89%]
06:15:53 test/integration/test_reporawfilestore.py::TestRepoRawFileStore::test_dir PASSED [ 89%]
06:15:53 test/integration/test_reporawfilestore.py::TestRepoRawFileStore::testCreate PASSED [ 89%]
06:15:53 test/integration/test_reporawfilestore.py::TestRepoRawFileStore::testWrite PASSED [ 89%]
06:15:53 test/integration/test_reporawfilestore.py::TestRepoRawFileStore::testFailedWrite PASSED [ 89%]
06:15:53 test/integration/test_reporawfilestore.py::TestRepoRawFileStore::testWriteRead PASSED [ 89%]
06:15:54 test/integration/test_reporawfilestore.py::TestRepoRawFileStore::testAppend PASSED [ 89%]
06:15:54 test/integration/test_reporawfilestore.py::TestRepoRawFileStore::testTruncateToZero PASSED [ 89%]
06:15:54 test/integration/test_reporawfilestore.py::TestRepoRawFileStore::testClose PASSED [ 90%]
06:15:54 test/integration/test_reporawfilestore.py::TestRepoRawFileStore::testImportLogFilenameSetting PASSED [ 90%]
06:15:57 test/integration/test_repository.py::TestRepository::test_dir PASSED [ 90%]
06:15:57 test/integration/test_repository.py::TestRepository::testBasicUsage PASSED [ 90%]
06:15:57 test/integration/test_repository.py::TestRepository::testSanityCheckRepos PASSED [ 90%]
06:15:57 test/integration/test_repository.py::TestRepository::testManagedRepoAsPubliRepo PASSED [ 90%]
06:16:00 test/integration/test_repository.py::TestFileExists::test_dir PASSED [ 90%]
06:16:00 test/integration/test_repository.py::TestFileExists::testFileExistsForDirectory PASSED [ 90%]
06:16:00 test/integration/test_repository.py::TestFileExists::testFileExistsForFile PASSED [ 90%]
06:16:03 test/integration/test_repository.py::TestManagedRepositoryMultiUser::test_dir PASSED [ 90%]
06:16:08 test/integration/test_repository.py::TestManagedRepositoryMultiUser::testTopPrivateGroup PASSED [ 90%]
06:16:14 test/integration/test_repository.py::TestManagedRepositoryMultiUser::testDirPrivateGroup PASSED [ 90%]
06:16:19 test/integration/test_repository.py::TestManagedRepositoryMultiUser::testDirReadOnlyGroup PASSED [ 90%]
06:16:24 test/integration/test_repository.py::TestManagedRepositoryMultiUser::testDirReadWriteGroup PASSED [ 90%]
06:16:30 test/integration/test_repository.py::TestManagedRepositoryMultiUser::testDirReadAnnotateGroup PASSED [ 90%]
06:16:32 test/integration/test_repository.py::TestManagedRepositoryMultiUser::testMultiGroup PASSED [ 90%]
06:16:35 test/integration/test_repository.py::TestPythonImporter::test_dir PASSED [ 90%]
06:16:38 test/integration/test_repository.py::TestPythonImporter::testImportFileset PASSED [ 90%]
06:16:41 test/integration/test_repository.py::TestPythonImporter::testImportPaths PASSED [ 90%]
06:16:44 test/integration/test_repository.py::TestPythonImporter::testReopenRawFileStoresPR2542 PASSED [ 90%]
06:16:48 test/integration/test_repository.py::TestPythonImporter::testImportsFrom2Groups PASSED [ 91%]
06:16:51 test/integration/test_repository.py::TestRawAccess::test_dir PASSED [ 91%]
06:16:51 test/integration/test_repository.py::TestRawAccess::testAsNonAdmin PASSED [ 91%]
06:16:51 test/integration/test_repository.py::TestRawAccess::testAsAdmin PASSED [ 91%]
06:16:53 test/integration/test_repository.py::TestDbSync::test_dir PASSED [ 91%]
06:16:53 test/integration/test_repository.py::TestDbSync::testMtime PASSED [ 91%]
06:16:54 test/integration/test_repository.py::TestDbSync::testFileExists PASSED [ 91%]
06:16:54 test/integration/test_repository.py::TestDbSync::testNonDbFileNotReturned PASSED [ 91%]
06:16:56 test/integration/test_repository.py::TestRecursiveDelete::test_dir PASSED [ 91%]
06:16:56 test/integration/test_repository.py::TestRecursiveDelete::testCmdDeleteCantDeleteDirectories PASSED [ 91%]
06:16:57 test/integration/test_repository.py::TestRecursiveDelete::testRecursiveDeleteMethodAvailable PASSED [ 91%]
06:16:57 test/integration/test_repository.py::TestRecursiveDelete::testDoubleDot PASSED [ 91%]
06:17:00 test/integration/test_repository.py::TestDeleteLog::test_dir PASSED [ 91%]
06:17:00 test/integration/test_repository.py::TestDeleteLog::testSimpleDelete PASSED [ 91%]
06:17:02 test/integration/test_repository.py::TestUserTemplate::test_dir PASSED [ 91%]
06:17:02 test/integration/test_repository.py::TestUserTemplate::testCreateUuidFails PASSED [ 91%]
06:17:03 test/integration/test_repository.py::TestUserTemplate::testCreateUserDirPasses PASSED [ 91%]
06:17:03 test/integration/test_repository.py::TestUserTemplate::testCreateUuidUnderUserDirPasses PASSED [ 91%]
06:17:03 test/integration/test_repository.py::TestUserTemplate::testUserDirShouldBeGloballyWriteable PASSED [ 91%]
06:17:06 test/integration/test_repository.py::TestFilesetQueries::test_dir PASSED [ 91%]
06:17:06 test/integration/test_repository.py::TestFilesetQueries::testDeleteQuery PASSED [ 92%]
06:17:06 test/integration/test_repository.py::TestFilesetQueries::testCountFilesetFiles PASSED [ 92%]
06:17:06 test/integration/test_repository.py::TestFilesetQueries::testImportedImageFiles PASSED [ 92%]
06:17:08 test/integration/test_repository.py::TestOriginalMetadata::test_dir PASSED [ 92%]
06:17:12 test/integration/test_repository.py::TestOriginalMetadata::testFakeImport PASSED [ 92%]
06:17:14 test/integration/test_repository.py::TestDeletePerformance::test_dir PASSED [ 92%]
06:17:23 test/integration/test_repository.py::TestDeletePerformance::testImport PASSED [ 92%]
06:17:25 test/integration/test_rois.py::TestRois::teststats1 PASSED [ 92%]
06:17:25 test/integration/test_rois.py::TestRois::test3703 PASSED [ 92%]
06:17:31 test/integration/test_rois.py::TestRois::testGetROICount PASSED [ 92%]
06:17:36 test/integration/test_rois.py::TestRois::test8990 PASSED [ 92%]
06:17:36 test/integration/test_rois.py::TestRois::testShapeColors[color0] PASSED [ 92%]
06:17:36 test/integration/test_rois.py::TestRois::testShapeColors[color1] PASSED [ 92%]
06:17:36 test/integration/test_rois.py::TestRois::testShapeColors[color2] PASSED [ 92%]
06:17:36 test/integration/test_rois.py::TestRois::testShapeColors[color3] PASSED [ 92%]
06:17:36 test/integration/test_rois.py::TestRois::testShapeColors[color4] PASSED [ 92%]
06:17:36 test/integration/test_rois.py::TestRois::testShapeColors[color5] PASSED [ 92%]
06:17:36 test/integration/test_rois.py::TestRois::testShapeColors[color6] PASSED [ 92%]
06:17:36 test/integration/test_rois.py::TestRois::testShapeColors[color7] PASSED [ 92%]
06:17:36 test/integration/test_rois.py::TestRois::testShapeColors[color8] PASSED [ 92%]
06:17:36 test/integration/test_rois.py::TestRois::testShapeColors[color9] PASSED [ 92%]
06:17:37 test/integration/test_rois.py::TestRois::testGetShapeStatsRestricted PASSED [ 93%]
06:17:39 test/integration/test_scripts.py::TestScripts::testBasicUsage PASSED [ 93%]
06:17:39 test/integration/test_scripts.py::TestScripts::testTicket1036 PASSED [ 93%]
06:17:40 test/integration/test_scripts.py::TestScripts::testUploadAndPing PASSED [ 93%]
06:17:41 test/integration/test_scripts.py::TestScripts::testUpload2562 PASSED [ 93%]
06:17:43 test/integration/test_scripts.py::TestScripts::testDelete6905 PASSED [ 93%]
06:17:46 test/integration/test_scripts.py::TestScripts::testDelete11371 PASSED [ 93%]
06:17:50 test/integration/test_scripts.py::TestScripts::testUploadOfficialScript PASSED [ 93%]
06:17:55 test/integration/test_scripts.py::TestScripts::testRunScript PASSED [ 93%]
06:17:59 test/integration/test_scripts.py::TestScripts::testEditScript PASSED [ 93%]
06:18:03 test/integration/test_scripts.py::TestScripts::testScriptValidation PASSED [ 93%]
06:18:05 test/integration/test_scripts.py::TestScripts::testSpeedOfThumbnailFigure PASSED [ 93%]
06:18:13 test/integration/test_scripts.py::TestScripts::test6066 PASSED [ 93%]
06:18:17 test/integration/test_scripts.py::TestScripts::testDynamicTime PASSED [ 93%]
06:18:25 test/integration/test_scripts.py::TestScripts::testDynamicUpdate PASSED [ 93%]
06:18:33 test/integration/test_search.py::TestSearch::test2541 PASSED [ 93%]
06:18:46 test/integration/test_search.py::TestSearch::test3164Private PASSED [ 93%]
06:19:00 test/integration/test_search.py::TestSearch::test3164ReadOnlySelf PASSED [ 93%]
06:19:16 test/integration/test_search.py::TestSearch::test3164ReadOnlyOther PASSED [ 93%]
06:19:30 test/integration/test_search.py::TestSearch::test3164CollabSelf PASSED [ 93%]
06:19:46 test/integration/test_search.py::TestSearch::test3164CollabOther PASSED [ 94%]
06:19:50 test/integration/test_search.py::TestSearch::test3721Ordering PASSED [ 94%]
06:20:22 test/integration/test_search.py::TestSearch::test8692 PASSED [ 94%]
06:20:28 test/integration/test_search.py::TestSearch::test8846 PASSED [ 94%]
06:20:40 test/integration/test_search.py::TestSearch::testClientPath PASSED [ 94%]
06:20:51 test/integration/test_search.py::TestSearch::testFilename PASSED [ 94%]
06:21:00 test/integration/test_search.py::TestSearch::test_csv_attachment PASSED [ 94%]
06:21:10 test/integration/test_search.py::TestSearch::test_txt_attachment PASSED [ 94%]
06:21:15 test/integration/test_search.py::TestSearch::test_word_portions PASSED [ 94%]
06:21:18 test/integration/test_search.py::TestSearch::test_empty_query_string PASSED [ 94%]
06:21:24 test/integration/test_search.py::TestSearch::test_hyphen_underscore[very-small-very small] PASSED [ 94%]
06:21:30 test/integration/test_search.py::TestSearch::test_hyphen_underscore[very-small-very-small] PASSED [ 94%]
06:21:36 test/integration/test_search.py::TestSearch::test_hyphen_underscore[very-small-very_small] PASSED [ 94%]
06:21:41 test/integration/test_search.py::TestSearch::test_hyphen_underscore[very-small-small very] PASSED [ 94%]
06:21:45 test/integration/test_search.py::TestSearch::test_hyphen_underscore[very_small-very small] PASSED [ 94%]
06:21:51 test/integration/test_search.py::TestSearch::test_hyphen_underscore[very_small-very-small] PASSED [ 94%]
06:21:55 test/integration/test_search.py::TestSearch::test_hyphen_underscore[very_small-very_small] PASSED [ 94%]
06:21:59 test/integration/test_search.py::TestSearch::test_hyphen_underscore[very_small-small very] PASSED [ 94%]
06:22:05 test/integration/test_search.py::TestSearch::test_hyphen_underscore[very small-very small] PASSED [ 94%]
06:22:09 test/integration/test_search.py::TestSearch::test_hyphen_underscore[very small-very-small] PASSED [ 94%]
06:22:13 test/integration/test_search.py::TestSearch::test_hyphen_underscore[very small-very_small] PASSED [ 95%]
06:22:17 test/integration/test_search.py::TestSearch::test_hyphen_underscore[very small-small very] PASSED [ 95%]
06:22:23 test/integration/test_search.py::TestSearch::test_map_annotations PASSED [ 95%]
06:22:25 test/integration/test_simple.py::TestSimple::testUserId PASSED [ 95%]
06:22:25 test/integration/test_simple.py::TestSimple::testGroupId PASSED [ 95%]
06:22:25 test/integration/test_simple.py::TestSimple::testGroupPermissions PASSED [ 95%]
06:22:37 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testThumbs PASSED [ 95%]
06:22:42 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test9070 PASSED [ 95%]
06:22:45 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testPrivate10618RootWithGrpCtx PASSED [ 95%]
06:22:47 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testPrivate10618RootWithGrpCtxButNoLoad PASSED [ 95%]
06:22:51 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testReadOnly10618RootWithGrpCtx PASSED [ 95%]
06:22:53 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testReadOnly10618RootWithGrpCtxButNoLoad PASSED [ 95%]
06:22:58 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testReadOnly10618MemberWithGrpCtxButNoLoad PASSED [ 95%]
06:23:04 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsThumbs PASSED [ 95%]
06:23:09 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsThumbsReadOnly PASSED [ 95%]
06:23:14 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[owner-readOnly-saveCurrent] PASSED [ 95%]
06:23:19 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[owner-readOnly-saveAs] PASSED [ 95%]
06:23:25 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[owner-readOnly-request] PASSED [ 95%]
06:23:30 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[owner-readOnly-resetDefault] PASSED [ 95%]
06:23:35 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[owner-readOnly-resetDefaultNoSave] PASSED [ 95%]
06:23:40 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[owner-readAnnotate-saveCurrent] PASSED [ 96%]
06:23:46 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[owner-readAnnotate-saveAs] PASSED [ 96%]
06:23:51 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[owner-readAnnotate-request] PASSED [ 96%]
06:23:57 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[owner-readAnnotate-resetDefault] PASSED [ 96%]
06:24:02 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[owner-readAnnotate-resetDefaultNoSave] PASSED [ 96%]
06:24:07 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[owner-readWrite-saveCurrent] PASSED [ 96%]
06:24:13 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[owner-readWrite-saveAs] PASSED [ 96%]
06:24:18 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[owner-readWrite-request] PASSED [ 96%]
06:24:23 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[owner-readWrite-resetDefault] PASSED [ 96%]
06:24:28 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[owner-readWrite-resetDefaultNoSave] PASSED [ 96%]
06:24:33 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[admin-readOnly-saveCurrent] PASSED [ 96%]
06:24:39 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[admin-readOnly-saveAs] PASSED [ 96%]
06:24:45 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[admin-readOnly-request] PASSED [ 96%]
06:24:50 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[admin-readOnly-resetDefault] PASSED [ 96%]
06:24:56 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[admin-readOnly-resetDefaultNoSave] PASSED [ 96%]
06:25:02 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[admin-readAnnotate-saveCurrent] PASSED [ 96%]
06:25:08 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[admin-readAnnotate-saveAs] PASSED [ 96%]
06:25:14 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[admin-readAnnotate-request] PASSED [ 96%]
06:25:20 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[admin-readAnnotate-resetDefault] PASSED [ 96%]
06:25:25 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[admin-readAnnotate-resetDefaultNoSave] PASSED [ 96%]
06:25:31 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[admin-readWrite-saveCurrent] PASSED [ 96%]
06:25:37 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[admin-readWrite-saveAs] PASSED [ 97%]
06:25:43 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[admin-readWrite-request] PASSED [ 97%]
06:25:49 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[admin-readWrite-resetDefault] PASSED [ 97%]
06:25:55 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[admin-readWrite-resetDefaultNoSave] PASSED [ 97%]
06:26:01 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsGetThumbnail[readOnly-owner] PASSED [ 97%]
06:26:06 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsGetThumbnail[readOnly-admin] PASSED [ 97%]
06:26:12 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsGetThumbnail[readAnnotate-owner] PASSED [ 97%]
06:26:18 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsGetThumbnail[readAnnotate-admin] PASSED [ 97%]
06:26:24 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsGetThumbnail[readWrite-owner] PASSED [ 97%]
06:26:29 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsGetThumbnail[readWrite-admin] PASSED [ 97%]
06:26:35 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsSetRnd[readOnly-owner] PASSED [ 97%]
06:26:41 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsSetRnd[readOnly-admin] PASSED [ 97%]
06:26:47 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsSetRnd[readAnnotate-owner] PASSED [ 97%]
06:26:53 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsSetRnd[readAnnotate-admin] PASSED [ 97%]
06:26:59 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsSetRnd[readWrite-owner] PASSED [ 97%]
06:27:05 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsSetRnd[readWrite-admin] PASSED [ 97%]
06:27:08 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testGetThumbnailSetAfterApplySettings PASSED [ 97%]
06:27:15 test/integration/test_thumbs.py::TestThumbs::testCreateThumbnails PASSED [ 97%]
06:27:18 test/integration/test_thumbs.py::TestThumbs::testCreateThumbnails64x64 PASSED [ 97%]
06:27:26 test/integration/test_thumbs.py::TestThumbs::testCreateThumbnailsByLongestSideSet64x64 PASSED [ 97%]
06:27:30 test/integration/test_thumbs.py::TestThumbs::testThumbnailExists PASSED [ 98%]
06:27:38 test/integration/test_thumbs.py::TestThumbs::testThumbnailVersion[one] PASSED [ 98%]
06:27:45 test/integration/test_thumbs.py::TestThumbs::testThumbnailVersion[set] PASSED [ 98%]
06:27:49 test/integration/test_thumbs.py::TestThumbs::testGetThumbnailx64x64 PASSED [ 98%]
06:27:53 test/integration/test_thumbs.py::TestThumbs::testGetThumbnailByLongestSidex64 PASSED [ 98%]
06:27:57 test/integration/test_thumbs.py::TestThumbs::testGetThumbnailDirectx64x64 PASSED [ 98%]
06:28:01 test/integration/test_thumbs.py::TestThumbs::testGetThumbnailForSectionDirectx0x0x64x64 PASSED [ 98%]
06:28:05 test/integration/test_thumbs.py::TestThumbs::testGetThumbnailx64x60 PASSED [ 98%]
06:28:09 test/integration/test_thumbs.py::TestThumbs::testGetThumbnailByLongestSidex60 PASSED [ 98%]
06:28:12 test/integration/test_thumbs.py::TestThumbs::testGetThumbnailDirectx64x60 PASSED [ 98%]
06:28:16 test/integration/test_thumbs.py::TestThumbs::testGetThumbnailForSectionDirectx0x0x64x60 PASSED [ 98%]
06:28:24 test/integration/test_thumbs.py::TestThumbs::testGetThumbnailSetx64x64 PASSED [ 98%]
06:28:32 test/integration/test_thumbs.py::TestThumbs::testGetThumbnailByLongestSideSetx64 PASSED [ 98%]
06:28:35 test/integration/test_tickets1000.py::TestTicket1000::test711 PASSED [ 98%]
06:28:35 test/integration/test_tickets1000.py::TestTicket1000::test843 PASSED [ 98%]
06:28:35 test/integration/test_tickets1000.py::TestTicket1000::test880 PASSED [ 98%]
06:28:35 test/integration/test_tickets1000.py::TestTicket1000::test883WithoutClose PASSED [ 98%]
06:28:35 test/integration/test_tickets1000.py::TestTicket1000::test883WithClose PASSED [ 98%]
06:28:35 test/integration/test_tickets1000.py::TestTicket1000::test883Upload PASSED [ 98%]
06:28:35 test/integration/test_tickets1000.py::TestTicket1000::test985 PASSED [ 98%]
06:28:37 test/integration/test_tickets2000.py::TestTickets2000::test1064 PASSED [ 99%]
06:28:43 test/integration/test_tickets2000.py::TestTickets2000::test1067 PASSED [ 99%]
06:28:43 test/integration/test_tickets2000.py::TestTickets2000::test1027 PASSED [ 99%]
06:28:47 test/integration/test_tickets2000.py::TestTickets2000::test1069 PASSED [ 99%]
06:28:47 test/integration/test_tickets2000.py::TestTickets2000::test1071 PASSED [ 99%]
06:28:53 test/integration/test_tickets2000.py::TestTickets2000::test1071_1 PASSED [ 99%]
06:28:58 test/integration/test_tickets2000.py::TestTickets2000::test1072 PASSED [ 99%]
06:28:59 test/integration/test_tickets2000.py::TestTickets2000::test1088 PASSED [ 99%]
06:29:04 test/integration/test_tickets2000.py::TestTickets2000::test1109 PASSED [ 99%]
06:29:10 test/integration/test_tickets2000.py::TestTickets2000::test1163 PASSED [ 99%]
06:29:10 test/integration/test_tickets2000.py::TestTickets2000::test1183 PASSED [ 99%]
06:29:12 test/integration/test_tickets3000.py::TestTickets3000::test2396 PASSED [ 99%]
06:29:22 test/integration/test_tickets3000.py::TestTickets3000::test2547 PASSED [ 99%]
06:29:23 test/integration/test_tickets3000.py::TestTickets3000::test2628 PASSED [ 99%]
06:29:26 test/integration/test_tickets3000.py::TestTickets3000::test2952 PASSED [ 99%]
06:29:56 test/integration/test_tickets3000.py::TestTickets3000::test2762 PASSED [ 99%]
06:30:02 test/integration/test_tickets4000.py::TestTickets4000::testChangeActiveGroup PASSED [ 99%]
06:30:04 test/integration/test_tickets4000.py::TestTickets4000::testChangeActiveGroupWhenConnectionLost PASSED [ 99%]
06:30:07 test/integration/test_tickets4000.py::TestTickets4000::test3201 PASSED [ 99%]
06:30:07 test/integration/test_tickets4000.py::TestTickets4000::test3131 PASSED [ 99%]
06:30:13 test/integration/test_util.py::TestUpgradeCheck::testReal FAILED [100%]
06:30:13 ==================================== ERRORS ====================================
06:30:13 ______________ ERROR at setup of TestConnectionMethods.testClose _______________
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efed4c4cac0>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efee39f0250>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:13 self._send_request(method, url, body, headers, encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:13 self.endheaders(body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:13 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:13 self.send(msg)
06:30:13 /usr/lib64/python3.9/http/client.py:980: in send
06:30:13 self.connect()
06:30:13 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:13 super().connect()
06:30:13 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:13 self.sock = self._create_connection(
06:30:13 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:13 raise err
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 address = ('downloads.openmicroscopy.org', 443)
06:30:13 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:13 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:13 source_address=None):
06:30:13 """Connect to *address* and return the socket object.
06:30:13 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:13 port)``) and return the socket object. Passing the optional
06:30:13 *timeout* parameter will set the timeout on the socket instance
06:30:13 before attempting to connect. If no *timeout* is supplied, the
06:30:13 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:13 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:13 for the socket to bind as a source address before making the connection.
06:30:13 A host of '' or port 0 tells the OS to use the default.
06:30:13 """
06:30:13 host, port = address
06:30:13 err = None
06:30:13 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:13 af, socktype, proto, canonname, sa = res
06:30:13 sock = None
06:30:13 try:
06:30:13 sock = socket(af, socktype, proto)
06:30:13 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:13 sock.settimeout(timeout)
06:30:13 if source_address:
06:30:13 sock.bind(source_address)
06:30:13 > sock.connect(sa)
06:30:13 E TimeoutError: [Errno 110] Connection timed out
06:30:13 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:13 During handling of the above exception, another exception occurred:
06:30:13 request = <SubRequest 'author_testimg' for <Function testClose>>
06:30:13 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efed4c44d00>
06:30:13 @pytest.fixture(scope='function')
06:30:13 def author_testimg(request, gatewaywrapper):
06:30:13 """
06:30:13 logs in as Author and returns the test image, creating it first if needed.
06:30:13 """
06:30:13 gatewaywrapper.loginAsAuthor()
06:30:13 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:13 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:13 i = IMAGES[alias].create()
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:13 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:13 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:13 return opener.open(url, data, timeout)
06:30:13 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:13 response = self._open(req, data)
06:30:13 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:13 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:13 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:13 result = func(*args)
06:30:13 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:13 return self.do_open(http.client.HTTPSConnection, req,
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efed4c4cac0>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efee39f0250>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 except OSError as err: # timeout error
06:30:13 > raise URLError(err)
06:30:13 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:13 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:13 ---------------------------- Captured stderr setup -----------------------------
06:30:13 2024-10-27 03:29:50,242 INFO [ omero.gateway] (MainThread) created connection (uuid=e87c9bae-1b0e-4992-8c95-e221a7b2435f)
06:30:13 I<
06:30:13 ------------------------------ Captured log setup ------------------------------
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=e87c9bae-1b0e-4992-8c95-e221a7b2435f)
06:30:13 _________ ERROR at setup of TestConnectionMethods.testTopLevelObjects __________
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efee38876d0>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efee3887a00>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:13 self._send_request(method, url, body, headers, encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:13 self.endheaders(body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:13 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:13 self.send(msg)
06:30:13 /usr/lib64/python3.9/http/client.py:980: in send
06:30:13 self.connect()
06:30:13 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:13 super().connect()
06:30:13 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:13 self.sock = self._create_connection(
06:30:13 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:13 raise err
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 address = ('downloads.openmicroscopy.org', 443)
06:30:13 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:13 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:13 source_address=None):
06:30:13 """Connect to *address* and return the socket object.
06:30:13 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:13 port)``) and return the socket object. Passing the optional
06:30:13 *timeout* parameter will set the timeout on the socket instance
06:30:13 before attempting to connect. If no *timeout* is supplied, the
06:30:13 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:13 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:13 for the socket to bind as a source address before making the connection.
06:30:13 A host of '' or port 0 tells the OS to use the default.
06:30:13 """
06:30:13 host, port = address
06:30:13 err = None
06:30:13 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:13 af, socktype, proto, canonname, sa = res
06:30:13 sock = None
06:30:13 try:
06:30:13 sock = socket(af, socktype, proto)
06:30:13 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:13 sock.settimeout(timeout)
06:30:13 if source_address:
06:30:13 sock.bind(source_address)
06:30:13 > sock.connect(sa)
06:30:13 E TimeoutError: [Errno 110] Connection timed out
06:30:13 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:13 During handling of the above exception, another exception occurred:
06:30:13 request = <SubRequest 'author_testimg' for <Function testTopLevelObjects>>
06:30:13 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efed4c44d00>
06:30:13 @pytest.fixture(scope='function')
06:30:13 def author_testimg(request, gatewaywrapper):
06:30:13 """
06:30:13 logs in as Author and returns the test image, creating it first if needed.
06:30:13 """
06:30:13 gatewaywrapper.loginAsAuthor()
06:30:13 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:13 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:13 i = IMAGES[alias].create()
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:13 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:13 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:13 return opener.open(url, data, timeout)
06:30:13 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:13 response = self._open(req, data)
06:30:13 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:13 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:13 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:13 result = func(*args)
06:30:13 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:13 return self.do_open(http.client.HTTPSConnection, req,
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efee38876d0>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efee3887a00>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 except OSError as err: # timeout error
06:30:13 > raise URLError(err)
06:30:13 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:13 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:13 ---------------------------- Captured stderr setup -----------------------------
06:30:13 2024-10-27 03:31:59,105 INFO [ omero.gateway] (MainThread) created connection (uuid=f50d32bd-11c4-4a3c-a17e-9526947f6fe9)
06:30:13 I<
06:30:13 ------------------------------ Captured log setup ------------------------------
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=f50d32bd-11c4-4a3c-a17e-9526947f6fe9)
06:30:13 ____________ ERROR at setup of TestFindObject.testFindExperimenter _____________
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efed70c0280>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efed70c0bb0>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:13 self._send_request(method, url, body, headers, encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:13 self.endheaders(body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:13 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:13 self.send(msg)
06:30:13 /usr/lib64/python3.9/http/client.py:980: in send
06:30:13 self.connect()
06:30:13 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:13 super().connect()
06:30:13 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:13 self.sock = self._create_connection(
06:30:13 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:13 raise err
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 address = ('downloads.openmicroscopy.org', 443)
06:30:13 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:13 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:13 source_address=None):
06:30:13 """Connect to *address* and return the socket object.
06:30:13 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:13 port)``) and return the socket object. Passing the optional
06:30:13 *timeout* parameter will set the timeout on the socket instance
06:30:13 before attempting to connect. If no *timeout* is supplied, the
06:30:13 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:13 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:13 for the socket to bind as a source address before making the connection.
06:30:13 A host of '' or port 0 tells the OS to use the default.
06:30:13 """
06:30:13 host, port = address
06:30:13 err = None
06:30:13 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:13 af, socktype, proto, canonname, sa = res
06:30:13 sock = None
06:30:13 try:
06:30:13 sock = socket(af, socktype, proto)
06:30:13 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:13 sock.settimeout(timeout)
06:30:13 if source_address:
06:30:13 sock.bind(source_address)
06:30:13 > sock.connect(sa)
06:30:13 E TimeoutError: [Errno 110] Connection timed out
06:30:13 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:13 During handling of the above exception, another exception occurred:
06:30:13 request = <SubRequest 'author_testimg_tiny' for <Function testFindExperimenter>>
06:30:13 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efed703cc40>
06:30:13 @pytest.fixture(scope='function')
06:30:13 def author_testimg_tiny(request, gatewaywrapper):
06:30:13 """
06:30:13 logs in as Author and returns the test image, creating it first if needed.
06:30:13 """
06:30:13 gatewaywrapper.loginAsAuthor()
06:30:13 > rv = gatewaywrapper.getTinyTestImage(autocreate=True)
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:61:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:161: in getTinyTestImage
06:30:13 return dbhelpers.getImage(self.gateway, 'tinyimg', forceds=dataset,
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:13 i = IMAGES[alias].create()
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:13 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:13 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:13 return opener.open(url, data, timeout)
06:30:13 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:13 response = self._open(req, data)
06:30:13 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:13 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:13 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:13 result = func(*args)
06:30:13 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:13 return self.do_open(http.client.HTTPSConnection, req,
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efed70c0280>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efed70c0bb0>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 except OSError as err: # timeout error
06:30:13 > raise URLError(err)
06:30:13 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:13 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:13 ---------------------------- Captured stderr setup -----------------------------
06:30:13 2024-10-27 03:34:27,532 INFO [ omero.gateway] (MainThread) created connection (uuid=2f24f16e-390d-496b-8149-8f4bffe239b7)
06:30:13 I<
06:30:13 ------------------------------ Captured log setup ------------------------------
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=2f24f16e-390d-496b-8149-8f4bffe239b7)
06:30:13 ______________ ERROR at setup of TestGetObject.testGetAnnotations ______________
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efec3432c10>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efec34329d0>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:13 self._send_request(method, url, body, headers, encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:13 self.endheaders(body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:13 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:13 self.send(msg)
06:30:13 /usr/lib64/python3.9/http/client.py:980: in send
06:30:13 self.connect()
06:30:13 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:13 super().connect()
06:30:13 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:13 self.sock = self._create_connection(
06:30:13 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:13 raise err
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 address = ('downloads.openmicroscopy.org', 443)
06:30:13 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:13 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:13 source_address=None):
06:30:13 """Connect to *address* and return the socket object.
06:30:13 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:13 port)``) and return the socket object. Passing the optional
06:30:13 *timeout* parameter will set the timeout on the socket instance
06:30:13 before attempting to connect. If no *timeout* is supplied, the
06:30:13 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:13 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:13 for the socket to bind as a source address before making the connection.
06:30:13 A host of '' or port 0 tells the OS to use the default.
06:30:13 """
06:30:13 host, port = address
06:30:13 err = None
06:30:13 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:13 af, socktype, proto, canonname, sa = res
06:30:13 sock = None
06:30:13 try:
06:30:13 sock = socket(af, socktype, proto)
06:30:13 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:13 sock.settimeout(timeout)
06:30:13 if source_address:
06:30:13 sock.bind(source_address)
06:30:13 > sock.connect(sa)
06:30:13 E TimeoutError: [Errno 110] Connection timed out
06:30:13 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:13 During handling of the above exception, another exception occurred:
06:30:13 request = <SubRequest 'author_testimg_tiny' for <Function testGetAnnotations>>
06:30:13 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efe3f7a56a0>
06:30:13 @pytest.fixture(scope='function')
06:30:13 def author_testimg_tiny(request, gatewaywrapper):
06:30:13 """
06:30:13 logs in as Author and returns the test image, creating it first if needed.
06:30:13 """
06:30:13 gatewaywrapper.loginAsAuthor()
06:30:13 > rv = gatewaywrapper.getTinyTestImage(autocreate=True)
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:61:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:161: in getTinyTestImage
06:30:13 return dbhelpers.getImage(self.gateway, 'tinyimg', forceds=dataset,
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:13 i = IMAGES[alias].create()
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:13 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:13 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:13 return opener.open(url, data, timeout)
06:30:13 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:13 response = self._open(req, data)
06:30:13 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:13 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:13 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:13 result = func(*args)
06:30:13 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:13 return self.do_open(http.client.HTTPSConnection, req,
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efec3432c10>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efec34329d0>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 except OSError as err: # timeout error
06:30:13 > raise URLError(err)
06:30:13 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:13 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:13 ---------------------------- Captured stderr setup -----------------------------
06:30:13 2024-10-27 03:37:04,354 INFO [ omero.gateway] (MainThread) created connection (uuid=02ccfa6f-42ad-47fa-af3e-2ceea1b23478)
06:30:13 I<
06:30:13 ------------------------------ Captured log setup ------------------------------
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=02ccfa6f-42ad-47fa-af3e-2ceea1b23478)
06:30:13 _________________ ERROR at setup of TestGetObject.testGetImage _________________
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efef7885a30>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efef7885dc0>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:13 self._send_request(method, url, body, headers, encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:13 self.endheaders(body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:13 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:13 self.send(msg)
06:30:13 /usr/lib64/python3.9/http/client.py:980: in send
06:30:13 self.connect()
06:30:13 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:13 super().connect()
06:30:13 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:13 self.sock = self._create_connection(
06:30:13 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:13 raise err
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 address = ('downloads.openmicroscopy.org', 443)
06:30:13 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:13 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:13 source_address=None):
06:30:13 """Connect to *address* and return the socket object.
06:30:13 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:13 port)``) and return the socket object. Passing the optional
06:30:13 *timeout* parameter will set the timeout on the socket instance
06:30:13 before attempting to connect. If no *timeout* is supplied, the
06:30:13 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:13 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:13 for the socket to bind as a source address before making the connection.
06:30:13 A host of '' or port 0 tells the OS to use the default.
06:30:13 """
06:30:13 host, port = address
06:30:13 err = None
06:30:13 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:13 af, socktype, proto, canonname, sa = res
06:30:13 sock = None
06:30:13 try:
06:30:13 sock = socket(af, socktype, proto)
06:30:13 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:13 sock.settimeout(timeout)
06:30:13 if source_address:
06:30:13 sock.bind(source_address)
06:30:13 > sock.connect(sa)
06:30:13 E TimeoutError: [Errno 110] Connection timed out
06:30:13 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:13 During handling of the above exception, another exception occurred:
06:30:13 request = <SubRequest 'author_testimg_tiny' for <Function testGetImage>>
06:30:13 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efe3f7a56a0>
06:30:13 @pytest.fixture(scope='function')
06:30:13 def author_testimg_tiny(request, gatewaywrapper):
06:30:13 """
06:30:13 logs in as Author and returns the test image, creating it first if needed.
06:30:13 """
06:30:13 gatewaywrapper.loginAsAuthor()
06:30:13 > rv = gatewaywrapper.getTinyTestImage(autocreate=True)
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:61:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:161: in getTinyTestImage
06:30:13 return dbhelpers.getImage(self.gateway, 'tinyimg', forceds=dataset,
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:13 i = IMAGES[alias].create()
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:13 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:13 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:13 return opener.open(url, data, timeout)
06:30:13 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:13 response = self._open(req, data)
06:30:13 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:13 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:13 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:13 result = func(*args)
06:30:13 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:13 return self.do_open(http.client.HTTPSConnection, req,
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efef7885a30>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efef7885dc0>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 except OSError as err: # timeout error
06:30:13 > raise URLError(err)
06:30:13 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:13 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:13 ---------------------------- Captured stderr setup -----------------------------
06:30:13 2024-10-27 03:39:13,255 INFO [ omero.gateway] (MainThread) created connection (uuid=4ad96243-c804-4ff8-bf77-fb39283821e2)
06:30:13 I<
06:30:13 ------------------------------ Captured log setup ------------------------------
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=4ad96243-c804-4ff8-bf77-fb39283821e2)
06:30:13 ______ ERROR at setup of TestGetObject.testGetImageLoadPixels[True-True] _______
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efef7972340>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efef7972460>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:13 self._send_request(method, url, body, headers, encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:13 self.endheaders(body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:13 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:13 self.send(msg)
06:30:13 /usr/lib64/python3.9/http/client.py:980: in send
06:30:13 self.connect()
06:30:13 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:13 super().connect()
06:30:13 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:13 self.sock = self._create_connection(
06:30:13 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:13 raise err
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 address = ('downloads.openmicroscopy.org', 443)
06:30:13 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:13 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:13 source_address=None):
06:30:13 """Connect to *address* and return the socket object.
06:30:13 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:13 port)``) and return the socket object. Passing the optional
06:30:13 *timeout* parameter will set the timeout on the socket instance
06:30:13 before attempting to connect. If no *timeout* is supplied, the
06:30:13 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:13 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:13 for the socket to bind as a source address before making the connection.
06:30:13 A host of '' or port 0 tells the OS to use the default.
06:30:13 """
06:30:13 host, port = address
06:30:13 err = None
06:30:13 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:13 af, socktype, proto, canonname, sa = res
06:30:13 sock = None
06:30:13 try:
06:30:13 sock = socket(af, socktype, proto)
06:30:13 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:13 sock.settimeout(timeout)
06:30:13 if source_address:
06:30:13 sock.bind(source_address)
06:30:13 > sock.connect(sa)
06:30:13 E TimeoutError: [Errno 110] Connection timed out
06:30:13 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:13 During handling of the above exception, another exception occurred:
06:30:13 request = <SubRequest 'author_testimg_tiny' for <Function testGetImageLoadPixels[True-True]>>
06:30:13 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efe3f7a56a0>
06:30:13 @pytest.fixture(scope='function')
06:30:13 def author_testimg_tiny(request, gatewaywrapper):
06:30:13 """
06:30:13 logs in as Author and returns the test image, creating it first if needed.
06:30:13 """
06:30:13 gatewaywrapper.loginAsAuthor()
06:30:13 > rv = gatewaywrapper.getTinyTestImage(autocreate=True)
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:61:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:161: in getTinyTestImage
06:30:13 return dbhelpers.getImage(self.gateway, 'tinyimg', forceds=dataset,
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:13 i = IMAGES[alias].create()
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:13 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:13 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:13 return opener.open(url, data, timeout)
06:30:13 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:13 response = self._open(req, data)
06:30:13 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:13 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:13 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:13 result = func(*args)
06:30:13 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:13 return self.do_open(http.client.HTTPSConnection, req,
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efef7972340>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efef7972460>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 except OSError as err: # timeout error
06:30:13 > raise URLError(err)
06:30:13 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:13 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:13 ---------------------------- Captured stderr setup -----------------------------
06:30:13 2024-10-27 03:41:24,459 INFO [ omero.gateway] (MainThread) created connection (uuid=93d019db-7cb9-45d2-ad9e-a1828e60cd06)
06:30:13 I<
06:30:13 ------------------------------ Captured log setup ------------------------------
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=93d019db-7cb9-45d2-ad9e-a1828e60cd06)
06:30:13 ______ ERROR at setup of TestGetObject.testGetImageLoadPixels[True-False] ______
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efef7ab0c70>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efef7ab0f10>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:13 self._send_request(method, url, body, headers, encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:13 self.endheaders(body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:13 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:13 self.send(msg)
06:30:13 /usr/lib64/python3.9/http/client.py:980: in send
06:30:13 self.connect()
06:30:13 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:13 super().connect()
06:30:13 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:13 self.sock = self._create_connection(
06:30:13 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:13 raise err
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 address = ('downloads.openmicroscopy.org', 443)
06:30:13 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:13 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:13 source_address=None):
06:30:13 """Connect to *address* and return the socket object.
06:30:13 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:13 port)``) and return the socket object. Passing the optional
06:30:13 *timeout* parameter will set the timeout on the socket instance
06:30:13 before attempting to connect. If no *timeout* is supplied, the
06:30:13 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:13 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:13 for the socket to bind as a source address before making the connection.
06:30:13 A host of '' or port 0 tells the OS to use the default.
06:30:13 """
06:30:13 host, port = address
06:30:13 err = None
06:30:13 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:13 af, socktype, proto, canonname, sa = res
06:30:13 sock = None
06:30:13 try:
06:30:13 sock = socket(af, socktype, proto)
06:30:13 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:13 sock.settimeout(timeout)
06:30:13 if source_address:
06:30:13 sock.bind(source_address)
06:30:13 > sock.connect(sa)
06:30:13 E TimeoutError: [Errno 110] Connection timed out
06:30:13 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:13 During handling of the above exception, another exception occurred:
06:30:13 request = <SubRequest 'author_testimg_tiny' for <Function testGetImageLoadPixels[True-False]>>
06:30:13 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efe3f7a56a0>
06:30:13 @pytest.fixture(scope='function')
06:30:13 def author_testimg_tiny(request, gatewaywrapper):
06:30:13 """
06:30:13 logs in as Author and returns the test image, creating it first if needed.
06:30:13 """
06:30:13 gatewaywrapper.loginAsAuthor()
06:30:13 > rv = gatewaywrapper.getTinyTestImage(autocreate=True)
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:61:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:161: in getTinyTestImage
06:30:13 return dbhelpers.getImage(self.gateway, 'tinyimg', forceds=dataset,
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:13 i = IMAGES[alias].create()
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:13 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:13 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:13 return opener.open(url, data, timeout)
06:30:13 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:13 response = self._open(req, data)
06:30:13 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:13 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:13 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:13 result = func(*args)
06:30:13 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:13 return self.do_open(http.client.HTTPSConnection, req,
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efef7ab0c70>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efef7ab0f10>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 except OSError as err: # timeout error
06:30:13 > raise URLError(err)
06:30:13 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:13 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:13 ---------------------------- Captured stderr setup -----------------------------
06:30:13 2024-10-27 03:43:35,401 INFO [ omero.gateway] (MainThread) created connection (uuid=fe89361e-8ddf-4d53-a21b-8299b452a83c)
06:30:13 I<
06:30:13 ------------------------------ Captured log setup ------------------------------
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=fe89361e-8ddf-4d53-a21b-8299b452a83c)
06:30:13 ______ ERROR at setup of TestGetObject.testGetImageLoadPixels[False-True] ______
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efef0126eb0>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efeafcdddf0>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:13 self._send_request(method, url, body, headers, encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:13 self.endheaders(body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:13 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:13 self.send(msg)
06:30:13 /usr/lib64/python3.9/http/client.py:980: in send
06:30:13 self.connect()
06:30:13 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:13 super().connect()
06:30:13 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:13 self.sock = self._create_connection(
06:30:13 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:13 raise err
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 address = ('downloads.openmicroscopy.org', 443)
06:30:13 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:13 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:13 source_address=None):
06:30:13 """Connect to *address* and return the socket object.
06:30:13 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:13 port)``) and return the socket object. Passing the optional
06:30:13 *timeout* parameter will set the timeout on the socket instance
06:30:13 before attempting to connect. If no *timeout* is supplied, the
06:30:13 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:13 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:13 for the socket to bind as a source address before making the connection.
06:30:13 A host of '' or port 0 tells the OS to use the default.
06:30:13 """
06:30:13 host, port = address
06:30:13 err = None
06:30:13 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:13 af, socktype, proto, canonname, sa = res
06:30:13 sock = None
06:30:13 try:
06:30:13 sock = socket(af, socktype, proto)
06:30:13 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:13 sock.settimeout(timeout)
06:30:13 if source_address:
06:30:13 sock.bind(source_address)
06:30:13 > sock.connect(sa)
06:30:13 E TimeoutError: [Errno 110] Connection timed out
06:30:13 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:13 During handling of the above exception, another exception occurred:
06:30:13 request = <SubRequest 'author_testimg_tiny' for <Function testGetImageLoadPixels[False-True]>>
06:30:13 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efe3f7a56a0>
06:30:13 @pytest.fixture(scope='function')
06:30:13 def author_testimg_tiny(request, gatewaywrapper):
06:30:13 """
06:30:13 logs in as Author and returns the test image, creating it first if needed.
06:30:13 """
06:30:13 gatewaywrapper.loginAsAuthor()
06:30:13 > rv = gatewaywrapper.getTinyTestImage(autocreate=True)
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:61:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:161: in getTinyTestImage
06:30:13 return dbhelpers.getImage(self.gateway, 'tinyimg', forceds=dataset,
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:13 i = IMAGES[alias].create()
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:13 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:13 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:13 return opener.open(url, data, timeout)
06:30:13 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:13 response = self._open(req, data)
06:30:13 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:13 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:13 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:13 result = func(*args)
06:30:13 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:13 return self.do_open(http.client.HTTPSConnection, req,
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efef0126eb0>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efeafcdddf0>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 except OSError as err: # timeout error
06:30:13 > raise URLError(err)
06:30:13 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:13 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:13 ---------------------------- Captured stderr setup -----------------------------
06:30:13 2024-10-27 03:45:46,479 INFO [ omero.gateway] (MainThread) created connection (uuid=750ece9c-dcef-4216-a102-3d6c8622c556)
06:30:13 I<
06:30:13 ------------------------------ Captured log setup ------------------------------
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=750ece9c-dcef-4216-a102-3d6c8622c556)
06:30:13 _____ ERROR at setup of TestGetObject.testGetImageLoadPixels[False-False] ______
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efef5116160>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efef51171c0>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:13 self._send_request(method, url, body, headers, encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:13 self.endheaders(body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:13 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:13 self.send(msg)
06:30:13 /usr/lib64/python3.9/http/client.py:980: in send
06:30:13 self.connect()
06:30:13 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:13 super().connect()
06:30:13 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:13 self.sock = self._create_connection(
06:30:13 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:13 raise err
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 address = ('downloads.openmicroscopy.org', 443)
06:30:13 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:13 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:13 source_address=None):
06:30:13 """Connect to *address* and return the socket object.
06:30:13 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:13 port)``) and return the socket object. Passing the optional
06:30:13 *timeout* parameter will set the timeout on the socket instance
06:30:13 before attempting to connect. If no *timeout* is supplied, the
06:30:13 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:13 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:13 for the socket to bind as a source address before making the connection.
06:30:13 A host of '' or port 0 tells the OS to use the default.
06:30:13 """
06:30:13 host, port = address
06:30:13 err = None
06:30:13 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:13 af, socktype, proto, canonname, sa = res
06:30:13 sock = None
06:30:13 try:
06:30:13 sock = socket(af, socktype, proto)
06:30:13 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:13 sock.settimeout(timeout)
06:30:13 if source_address:
06:30:13 sock.bind(source_address)
06:30:13 > sock.connect(sa)
06:30:13 E TimeoutError: [Errno 110] Connection timed out
06:30:13 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:13 During handling of the above exception, another exception occurred:
06:30:13 request = <SubRequest 'author_testimg_tiny' for <Function testGetImageLoadPixels[False-False]>>
06:30:13 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efe3f7a56a0>
06:30:13 @pytest.fixture(scope='function')
06:30:13 def author_testimg_tiny(request, gatewaywrapper):
06:30:13 """
06:30:13 logs in as Author and returns the test image, creating it first if needed.
06:30:13 """
06:30:13 gatewaywrapper.loginAsAuthor()
06:30:13 > rv = gatewaywrapper.getTinyTestImage(autocreate=True)
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:61:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:161: in getTinyTestImage
06:30:13 return dbhelpers.getImage(self.gateway, 'tinyimg', forceds=dataset,
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:13 i = IMAGES[alias].create()
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:13 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:13 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:13 return opener.open(url, data, timeout)
06:30:13 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:13 response = self._open(req, data)
06:30:13 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:13 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:13 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:13 result = func(*args)
06:30:13 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:13 return self.do_open(http.client.HTTPSConnection, req,
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efef5116160>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efef51171c0>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 except OSError as err: # timeout error
06:30:13 > raise URLError(err)
06:30:13 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:13 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:13 ---------------------------- Captured stderr setup -----------------------------
06:30:13 2024-10-27 03:47:57,568 INFO [ omero.gateway] (MainThread) created connection (uuid=c7a24b1f-c8ea-48a6-8e83-913228e71b09)
06:30:13 I<
06:30:13 ------------------------------ Captured log setup ------------------------------
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=c7a24b1f-c8ea-48a6-8e83-913228e71b09)
06:30:13 ________________ ERROR at setup of TestGetObject.testTraversal _________________
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efec867eee0>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efeca991910>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:13 self._send_request(method, url, body, headers, encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:13 self.endheaders(body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:13 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:13 self.send(msg)
06:30:13 /usr/lib64/python3.9/http/client.py:980: in send
06:30:13 self.connect()
06:30:13 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:13 super().connect()
06:30:13 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:13 self.sock = self._create_connection(
06:30:13 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:13 raise err
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 address = ('downloads.openmicroscopy.org', 443)
06:30:13 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:13 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:13 source_address=None):
06:30:13 """Connect to *address* and return the socket object.
06:30:13 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:13 port)``) and return the socket object. Passing the optional
06:30:13 *timeout* parameter will set the timeout on the socket instance
06:30:13 before attempting to connect. If no *timeout* is supplied, the
06:30:13 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:13 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:13 for the socket to bind as a source address before making the connection.
06:30:13 A host of '' or port 0 tells the OS to use the default.
06:30:13 """
06:30:13 host, port = address
06:30:13 err = None
06:30:13 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:13 af, socktype, proto, canonname, sa = res
06:30:13 sock = None
06:30:13 try:
06:30:13 sock = socket(af, socktype, proto)
06:30:13 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:13 sock.settimeout(timeout)
06:30:13 if source_address:
06:30:13 sock.bind(source_address)
06:30:13 > sock.connect(sa)
06:30:13 E TimeoutError: [Errno 110] Connection timed out
06:30:13 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:13 During handling of the above exception, another exception occurred:
06:30:13 request = <SubRequest 'author_testimg_tiny' for <Function testTraversal>>
06:30:13 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efe3f7a56a0>
06:30:13 @pytest.fixture(scope='function')
06:30:13 def author_testimg_tiny(request, gatewaywrapper):
06:30:13 """
06:30:13 logs in as Author and returns the test image, creating it first if needed.
06:30:13 """
06:30:13 gatewaywrapper.loginAsAuthor()
06:30:13 > rv = gatewaywrapper.getTinyTestImage(autocreate=True)
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:61:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:161: in getTinyTestImage
06:30:13 return dbhelpers.getImage(self.gateway, 'tinyimg', forceds=dataset,
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:13 i = IMAGES[alias].create()
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:13 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:13 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:13 return opener.open(url, data, timeout)
06:30:13 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:13 response = self._open(req, data)
06:30:13 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:13 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:13 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:13 result = func(*args)
06:30:13 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:13 return self.do_open(http.client.HTTPSConnection, req,
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efec867eee0>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efeca991910>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 except OSError as err: # timeout error
06:30:13 > raise URLError(err)
06:30:13 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:13 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:13 ---------------------------- Captured stderr setup -----------------------------
06:30:13 2024-10-27 03:50:08,713 INFO [ omero.gateway] (MainThread) created connection (uuid=30c86ba3-ec92-41cb-ad9d-cb16d43acacf)
06:30:13 I<
06:30:13 ------------------------------ Captured log setup ------------------------------
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=30c86ba3-ec92-41cb-ad9d-cb16d43acacf)
06:30:13 __________________ ERROR at setup of TestImage.testThumbnail ___________________
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efeded38580>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efef50728b0>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:13 self._send_request(method, url, body, headers, encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:13 self.endheaders(body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:13 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:13 self.send(msg)
06:30:13 /usr/lib64/python3.9/http/client.py:980: in send
06:30:13 self.connect()
06:30:13 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:13 super().connect()
06:30:13 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:13 self.sock = self._create_connection(
06:30:13 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:13 raise err
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 address = ('downloads.openmicroscopy.org', 443)
06:30:13 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:13 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:13 source_address=None):
06:30:13 """Connect to *address* and return the socket object.
06:30:13 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:13 port)``) and return the socket object. Passing the optional
06:30:13 *timeout* parameter will set the timeout on the socket instance
06:30:13 before attempting to connect. If no *timeout* is supplied, the
06:30:13 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:13 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:13 for the socket to bind as a source address before making the connection.
06:30:13 A host of '' or port 0 tells the OS to use the default.
06:30:13 """
06:30:13 host, port = address
06:30:13 err = None
06:30:13 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:13 af, socktype, proto, canonname, sa = res
06:30:13 sock = None
06:30:13 try:
06:30:13 sock = socket(af, socktype, proto)
06:30:13 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:13 sock.settimeout(timeout)
06:30:13 if source_address:
06:30:13 sock.bind(source_address)
06:30:13 > sock.connect(sa)
06:30:13 E TimeoutError: [Errno 110] Connection timed out
06:30:13 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:13 During handling of the above exception, another exception occurred:
06:30:13 request = <SubRequest 'author_testimg' for <Function testThumbnail>>
06:30:13 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efefa3b0400>
06:30:13 @pytest.fixture(scope='function')
06:30:13 def author_testimg(request, gatewaywrapper):
06:30:13 """
06:30:13 logs in as Author and returns the test image, creating it first if needed.
06:30:13 """
06:30:13 gatewaywrapper.loginAsAuthor()
06:30:13 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:13 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:13 i = IMAGES[alias].create()
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:13 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:13 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:13 return opener.open(url, data, timeout)
06:30:13 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:13 response = self._open(req, data)
06:30:13 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:13 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:13 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:13 result = func(*args)
06:30:13 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:13 return self.do_open(http.client.HTTPSConnection, req,
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efeded38580>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efef50728b0>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 except OSError as err: # timeout error
06:30:13 > raise URLError(err)
06:30:13 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:13 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:13 ---------------------------- Captured stderr setup -----------------------------
06:30:13 2024-10-27 03:52:44,215 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:13 2024-10-27 03:52:44,222 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:13 2024-10-27 03:52:44,263 INFO [ omero.gateway] (MainThread) created connection (uuid=e7a8d67e-46b5-47e3-a712-fa40e4022c68)
06:30:13 2024-10-27 03:52:44,806 INFO [ omero.gateway] (MainThread) created connection (uuid=b4de5406-a388-4341-8658-971ad9c0eb3a)
06:30:13 2024-10-27 03:52:44,852 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:13 2024-10-27 03:52:44,901 INFO [ omero.gateway] (MainThread) created connection (uuid=dbe0d5e1-a5f8-4ad6-b65f-f30c34dd7181)
06:30:13 2024-10-27 03:52:44,943 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:13 2024-10-27 03:52:44,988 INFO [ omero.gateway] (MainThread) created connection (uuid=096bc3a4-310c-4bc8-9507-ca5ea406e82f)
06:30:13 2024-10-27 03:52:45,036 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:13 2024-10-27 03:52:45,081 INFO [ omero.gateway] (MainThread) created connection (uuid=a8ec1e61-c185-406c-8363-38c4e6d06dd0)
06:30:13 2024-10-27 03:52:45,127 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:13 2024-10-27 03:52:45,172 INFO [ omero.gateway] (MainThread) created connection (uuid=501f23fd-abfc-40dc-9c97-69c15a8bd3eb)
06:30:13 2024-10-27 03:52:45,215 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:13 2024-10-27 03:52:45,259 INFO [ omero.gateway] (MainThread) created connection (uuid=f056c078-c106-424d-96a2-323580de0dc6)
06:30:13 2024-10-27 03:52:45,302 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:13 2024-10-27 03:52:45,346 INFO [ omero.gateway] (MainThread) created connection (uuid=b89a8a14-2a47-4481-8402-a64720b33a5d)
06:30:13 2024-10-27 03:52:45,399 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:13 2024-10-27 03:52:45,443 INFO [ omero.gateway] (MainThread) created connection (uuid=eda70e2b-fa8b-4833-b107-de2a6196762b)
06:30:13 2024-10-27 03:52:45,502 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:13 2024-10-27 03:52:45,546 INFO [ omero.gateway] (MainThread) created connection (uuid=f1ac13fe-7373-40ff-936a-3cae97d96a30)
06:30:13 2024-10-27 03:52:45,598 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:13 2024-10-27 03:52:45,601 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:13 2024-10-27 03:52:45,645 INFO [ omero.gateway] (MainThread) created connection (uuid=ac20f083-9522-45a3-862c-bb2ebe96a908)
06:30:13 2024-10-27 03:52:45,731 INFO [ omero.gateway] (MainThread) created connection (uuid=fdf2bd67-f2ea-4c50-bb40-ae209baacd8d)
06:30:13 I<
06:30:13 ------------------------------ Captured log setup ------------------------------
06:30:13 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:13 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=e7a8d67e-46b5-47e3-a712-fa40e4022c68)
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=b4de5406-a388-4341-8658-971ad9c0eb3a)
06:30:13 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=dbe0d5e1-a5f8-4ad6-b65f-f30c34dd7181)
06:30:13 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=096bc3a4-310c-4bc8-9507-ca5ea406e82f)
06:30:13 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=a8ec1e61-c185-406c-8363-38c4e6d06dd0)
06:30:13 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=501f23fd-abfc-40dc-9c97-69c15a8bd3eb)
06:30:13 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=f056c078-c106-424d-96a2-323580de0dc6)
06:30:13 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=b89a8a14-2a47-4481-8402-a64720b33a5d)
06:30:13 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=eda70e2b-fa8b-4833-b107-de2a6196762b)
06:30:13 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=f1ac13fe-7373-40ff-936a-3cae97d96a30)
06:30:13 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:13 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=ac20f083-9522-45a3-862c-bb2ebe96a908)
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=fdf2bd67-f2ea-4c50-bb40-ae209baacd8d)
06:30:13 _________________ ERROR at setup of TestImage.testThumbnailSet _________________
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efec3504a60>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efecadb7fd0>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:13 self._send_request(method, url, body, headers, encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:13 self.endheaders(body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:13 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:13 self.send(msg)
06:30:13 /usr/lib64/python3.9/http/client.py:980: in send
06:30:13 self.connect()
06:30:13 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:13 super().connect()
06:30:13 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:13 self.sock = self._create_connection(
06:30:13 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:13 raise err
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 address = ('downloads.openmicroscopy.org', 443)
06:30:13 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:13 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:13 source_address=None):
06:30:13 """Connect to *address* and return the socket object.
06:30:13 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:13 port)``) and return the socket object. Passing the optional
06:30:13 *timeout* parameter will set the timeout on the socket instance
06:30:13 before attempting to connect. If no *timeout* is supplied, the
06:30:13 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:13 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:13 for the socket to bind as a source address before making the connection.
06:30:13 A host of '' or port 0 tells the OS to use the default.
06:30:13 """
06:30:13 host, port = address
06:30:13 err = None
06:30:13 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:13 af, socktype, proto, canonname, sa = res
06:30:13 sock = None
06:30:13 try:
06:30:13 sock = socket(af, socktype, proto)
06:30:13 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:13 sock.settimeout(timeout)
06:30:13 if source_address:
06:30:13 sock.bind(source_address)
06:30:13 > sock.connect(sa)
06:30:13 E TimeoutError: [Errno 110] Connection timed out
06:30:13 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:13 During handling of the above exception, another exception occurred:
06:30:13 request = <SubRequest 'author_testimg' for <Function testThumbnailSet>>
06:30:13 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efefa3b0400>
06:30:13 @pytest.fixture(scope='function')
06:30:13 def author_testimg(request, gatewaywrapper):
06:30:13 """
06:30:13 logs in as Author and returns the test image, creating it first if needed.
06:30:13 """
06:30:13 gatewaywrapper.loginAsAuthor()
06:30:13 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:13 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:13 i = IMAGES[alias].create()
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:13 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:13 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:13 return opener.open(url, data, timeout)
06:30:13 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:13 response = self._open(req, data)
06:30:13 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:13 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:13 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:13 result = func(*args)
06:30:13 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:13 return self.do_open(http.client.HTTPSConnection, req,
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efec3504a60>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efecadb7fd0>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 except OSError as err: # timeout error
06:30:13 > raise URLError(err)
06:30:13 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:13 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:13 ---------------------------- Captured stderr setup -----------------------------
06:30:13 2024-10-27 03:54:55,382 INFO [ omero.gateway] (MainThread) created connection (uuid=7cc42993-580f-4f4f-bb10-6993f65b4543)
06:30:13 I<
06:30:13 ------------------------------ Captured log setup ------------------------------
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=7cc42993-580f-4f4f-bb10-6993f65b4543)
06:30:13 _______________ ERROR at setup of TestImage.testRenderingModels ________________
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efec3491070>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efec34913a0>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:13 self._send_request(method, url, body, headers, encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:13 self.endheaders(body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:13 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:13 self.send(msg)
06:30:13 /usr/lib64/python3.9/http/client.py:980: in send
06:30:13 self.connect()
06:30:13 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:13 super().connect()
06:30:13 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:13 self.sock = self._create_connection(
06:30:13 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:13 raise err
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 address = ('downloads.openmicroscopy.org', 443)
06:30:13 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:13 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:13 source_address=None):
06:30:13 """Connect to *address* and return the socket object.
06:30:13 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:13 port)``) and return the socket object. Passing the optional
06:30:13 *timeout* parameter will set the timeout on the socket instance
06:30:13 before attempting to connect. If no *timeout* is supplied, the
06:30:13 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:13 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:13 for the socket to bind as a source address before making the connection.
06:30:13 A host of '' or port 0 tells the OS to use the default.
06:30:13 """
06:30:13 host, port = address
06:30:13 err = None
06:30:13 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:13 af, socktype, proto, canonname, sa = res
06:30:13 sock = None
06:30:13 try:
06:30:13 sock = socket(af, socktype, proto)
06:30:13 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:13 sock.settimeout(timeout)
06:30:13 if source_address:
06:30:13 sock.bind(source_address)
06:30:13 > sock.connect(sa)
06:30:13 E TimeoutError: [Errno 110] Connection timed out
06:30:13 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:13 During handling of the above exception, another exception occurred:
06:30:13 request = <SubRequest 'author_testimg' for <Function testRenderingModels>>
06:30:13 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efefa3b0400>
06:30:13 @pytest.fixture(scope='function')
06:30:13 def author_testimg(request, gatewaywrapper):
06:30:13 """
06:30:13 logs in as Author and returns the test image, creating it first if needed.
06:30:13 """
06:30:13 gatewaywrapper.loginAsAuthor()
06:30:13 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:13 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:13 i = IMAGES[alias].create()
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:13 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:13 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:13 return opener.open(url, data, timeout)
06:30:13 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:13 response = self._open(req, data)
06:30:13 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:13 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:13 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:13 result = func(*args)
06:30:13 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:13 return self.do_open(http.client.HTTPSConnection, req,
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efec3491070>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efec34913a0>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 except OSError as err: # timeout error
06:30:13 > raise URLError(err)
06:30:13 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:13 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:13 ---------------------------- Captured stderr setup -----------------------------
06:30:13 2024-10-27 03:57:06,417 INFO [ omero.gateway] (MainThread) created connection (uuid=23f4b21b-8e3b-4445-8e41-9a127fe2865b)
06:30:13 I<
06:30:13 ------------------------------ Captured log setup ------------------------------
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=23f4b21b-8e3b-4445-8e41-9a127fe2865b)
06:30:13 _________________ ERROR at setup of TestImage.testSplitChannel _________________
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efec3466fd0>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efec3466eb0>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:13 self._send_request(method, url, body, headers, encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:13 self.endheaders(body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:13 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:13 self.send(msg)
06:30:13 /usr/lib64/python3.9/http/client.py:980: in send
06:30:13 self.connect()
06:30:13 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:13 super().connect()
06:30:13 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:13 self.sock = self._create_connection(
06:30:13 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:13 raise err
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 address = ('downloads.openmicroscopy.org', 443)
06:30:13 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:13 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:13 source_address=None):
06:30:13 """Connect to *address* and return the socket object.
06:30:13 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:13 port)``) and return the socket object. Passing the optional
06:30:13 *timeout* parameter will set the timeout on the socket instance
06:30:13 before attempting to connect. If no *timeout* is supplied, the
06:30:13 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:13 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:13 for the socket to bind as a source address before making the connection.
06:30:13 A host of '' or port 0 tells the OS to use the default.
06:30:13 """
06:30:13 host, port = address
06:30:13 err = None
06:30:13 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:13 af, socktype, proto, canonname, sa = res
06:30:13 sock = None
06:30:13 try:
06:30:13 sock = socket(af, socktype, proto)
06:30:13 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:13 sock.settimeout(timeout)
06:30:13 if source_address:
06:30:13 sock.bind(source_address)
06:30:13 > sock.connect(sa)
06:30:13 E TimeoutError: [Errno 110] Connection timed out
06:30:13 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:13 During handling of the above exception, another exception occurred:
06:30:13 request = <SubRequest 'author_testimg' for <Function testSplitChannel>>
06:30:13 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efefa3b0400>
06:30:13 @pytest.fixture(scope='function')
06:30:13 def author_testimg(request, gatewaywrapper):
06:30:13 """
06:30:13 logs in as Author and returns the test image, creating it first if needed.
06:30:13 """
06:30:13 gatewaywrapper.loginAsAuthor()
06:30:13 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:13 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:13 i = IMAGES[alias].create()
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:13 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:13 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:13 return opener.open(url, data, timeout)
06:30:13 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:13 response = self._open(req, data)
06:30:13 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:13 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:13 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:13 result = func(*args)
06:30:13 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:13 return self.do_open(http.client.HTTPSConnection, req,
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efec3466fd0>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efec3466eb0>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 except OSError as err: # timeout error
06:30:13 > raise URLError(err)
06:30:13 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:13 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:13 ---------------------------- Captured stderr setup -----------------------------
06:30:13 2024-10-27 03:59:17,499 INFO [ omero.gateway] (MainThread) created connection (uuid=bc72a829-78ac-4fcd-8d54-feed8255137b)
06:30:13 I<
06:30:13 ------------------------------ Captured log setup ------------------------------
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=bc72a829-78ac-4fcd-8d54-feed8255137b)
06:30:13 __________________ ERROR at setup of TestImage.testLinePlots ___________________
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efeafcddc40>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efeeda21d90>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:13 self._send_request(method, url, body, headers, encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:13 self.endheaders(body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:13 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:13 self.send(msg)
06:30:13 /usr/lib64/python3.9/http/client.py:980: in send
06:30:13 self.connect()
06:30:13 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:13 super().connect()
06:30:13 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:13 self.sock = self._create_connection(
06:30:13 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:13 raise err
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 address = ('downloads.openmicroscopy.org', 443)
06:30:13 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:13 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:13 source_address=None):
06:30:13 """Connect to *address* and return the socket object.
06:30:13 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:13 port)``) and return the socket object. Passing the optional
06:30:13 *timeout* parameter will set the timeout on the socket instance
06:30:13 before attempting to connect. If no *timeout* is supplied, the
06:30:13 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:13 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:13 for the socket to bind as a source address before making the connection.
06:30:13 A host of '' or port 0 tells the OS to use the default.
06:30:13 """
06:30:13 host, port = address
06:30:13 err = None
06:30:13 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:13 af, socktype, proto, canonname, sa = res
06:30:13 sock = None
06:30:13 try:
06:30:13 sock = socket(af, socktype, proto)
06:30:13 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:13 sock.settimeout(timeout)
06:30:13 if source_address:
06:30:13 sock.bind(source_address)
06:30:13 > sock.connect(sa)
06:30:13 E TimeoutError: [Errno 110] Connection timed out
06:30:13 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:13 During handling of the above exception, another exception occurred:
06:30:13 request = <SubRequest 'author_testimg' for <Function testLinePlots>>
06:30:13 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efefa3b0400>
06:30:13 @pytest.fixture(scope='function')
06:30:13 def author_testimg(request, gatewaywrapper):
06:30:13 """
06:30:13 logs in as Author and returns the test image, creating it first if needed.
06:30:13 """
06:30:13 gatewaywrapper.loginAsAuthor()
06:30:13 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:13 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:13 i = IMAGES[alias].create()
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:13 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:13 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:13 return opener.open(url, data, timeout)
06:30:13 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:13 response = self._open(req, data)
06:30:13 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:13 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:13 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:13 result = func(*args)
06:30:13 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:13 return self.do_open(http.client.HTTPSConnection, req,
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efeafcddc40>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efeeda21d90>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 except OSError as err: # timeout error
06:30:13 > raise URLError(err)
06:30:13 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:13 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:13 ---------------------------- Captured stderr setup -----------------------------
06:30:13 2024-10-27 04:01:28,619 INFO [ omero.gateway] (MainThread) created connection (uuid=7a1e580d-93cf-4cf9-b7d9-1ea9f4a41c61)
06:30:13 I<
06:30:13 ------------------------------ Captured log setup ------------------------------
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=7a1e580d-93cf-4cf9-b7d9-1ea9f4a41c61)
06:30:13 _________________ ERROR at setup of TestImage.testProjections __________________
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efebe1d0880>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efec5f84b20>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:13 self._send_request(method, url, body, headers, encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:13 self.endheaders(body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:13 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:13 self.send(msg)
06:30:13 /usr/lib64/python3.9/http/client.py:980: in send
06:30:13 self.connect()
06:30:13 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:13 super().connect()
06:30:13 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:13 self.sock = self._create_connection(
06:30:13 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:13 raise err
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 address = ('downloads.openmicroscopy.org', 443)
06:30:13 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:13 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:13 source_address=None):
06:30:13 """Connect to *address* and return the socket object.
06:30:13 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:13 port)``) and return the socket object. Passing the optional
06:30:13 *timeout* parameter will set the timeout on the socket instance
06:30:13 before attempting to connect. If no *timeout* is supplied, the
06:30:13 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:13 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:13 for the socket to bind as a source address before making the connection.
06:30:13 A host of '' or port 0 tells the OS to use the default.
06:30:13 """
06:30:13 host, port = address
06:30:13 err = None
06:30:13 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:13 af, socktype, proto, canonname, sa = res
06:30:13 sock = None
06:30:13 try:
06:30:13 sock = socket(af, socktype, proto)
06:30:13 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:13 sock.settimeout(timeout)
06:30:13 if source_address:
06:30:13 sock.bind(source_address)
06:30:13 > sock.connect(sa)
06:30:13 E TimeoutError: [Errno 110] Connection timed out
06:30:13 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:13 During handling of the above exception, another exception occurred:
06:30:13 request = <SubRequest 'author_testimg' for <Function testProjections>>
06:30:13 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efefa3b0400>
06:30:13 @pytest.fixture(scope='function')
06:30:13 def author_testimg(request, gatewaywrapper):
06:30:13 """
06:30:13 logs in as Author and returns the test image, creating it first if needed.
06:30:13 """
06:30:13 gatewaywrapper.loginAsAuthor()
06:30:13 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:13 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:13 i = IMAGES[alias].create()
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:13 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:13 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:13 return opener.open(url, data, timeout)
06:30:13 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:13 response = self._open(req, data)
06:30:13 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:13 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:13 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:13 result = func(*args)
06:30:13 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:13 return self.do_open(http.client.HTTPSConnection, req,
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efebe1d0880>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efec5f84b20>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 except OSError as err: # timeout error
06:30:13 > raise URLError(err)
06:30:13 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:13 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:13 ---------------------------- Captured stderr setup -----------------------------
06:30:13 2024-10-27 04:03:39,713 INFO [ omero.gateway] (MainThread) created connection (uuid=31f022b2-118d-4700-9c14-7f0c2ec9f20d)
06:30:13 I<
06:30:13 ------------------------------ Captured log setup ------------------------------
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=31f022b2-118d-4700-9c14-7f0c2ec9f20d)
06:30:13 __________________ ERROR at setup of TestImage.testProperties __________________
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efeca960790>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efeaf7e68e0>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:13 self._send_request(method, url, body, headers, encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:13 self.endheaders(body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:13 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:13 self.send(msg)
06:30:13 /usr/lib64/python3.9/http/client.py:980: in send
06:30:13 self.connect()
06:30:13 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:13 super().connect()
06:30:13 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:13 self.sock = self._create_connection(
06:30:13 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:13 raise err
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 address = ('downloads.openmicroscopy.org', 443)
06:30:13 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:13 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:13 source_address=None):
06:30:13 """Connect to *address* and return the socket object.
06:30:13 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:13 port)``) and return the socket object. Passing the optional
06:30:13 *timeout* parameter will set the timeout on the socket instance
06:30:13 before attempting to connect. If no *timeout* is supplied, the
06:30:13 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:13 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:13 for the socket to bind as a source address before making the connection.
06:30:13 A host of '' or port 0 tells the OS to use the default.
06:30:13 """
06:30:13 host, port = address
06:30:13 err = None
06:30:13 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:13 af, socktype, proto, canonname, sa = res
06:30:13 sock = None
06:30:13 try:
06:30:13 sock = socket(af, socktype, proto)
06:30:13 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:13 sock.settimeout(timeout)
06:30:13 if source_address:
06:30:13 sock.bind(source_address)
06:30:13 > sock.connect(sa)
06:30:13 E TimeoutError: [Errno 110] Connection timed out
06:30:13 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:13 During handling of the above exception, another exception occurred:
06:30:13 request = <SubRequest 'author_testimg' for <Function testProperties>>
06:30:13 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efefa3b0400>
06:30:13 @pytest.fixture(scope='function')
06:30:13 def author_testimg(request, gatewaywrapper):
06:30:13 """
06:30:13 logs in as Author and returns the test image, creating it first if needed.
06:30:13 """
06:30:13 gatewaywrapper.loginAsAuthor()
06:30:13 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:13 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:13 i = IMAGES[alias].create()
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:13 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:13 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:13 return opener.open(url, data, timeout)
06:30:13 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:13 response = self._open(req, data)
06:30:13 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:13 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:13 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:13 result = func(*args)
06:30:13 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:13 return self.do_open(http.client.HTTPSConnection, req,
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efeca960790>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efeaf7e68e0>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 except OSError as err: # timeout error
06:30:13 > raise URLError(err)
06:30:13 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:13 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:13 ---------------------------- Captured stderr setup -----------------------------
06:30:13 2024-10-27 04:05:50,745 INFO [ omero.gateway] (MainThread) created connection (uuid=9cf88df9-db40-4333-bfd0-acd8cae017bc)
06:30:13 I<
06:30:13 ------------------------------ Captured log setup ------------------------------
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=9cf88df9-db40-4333-bfd0-acd8cae017bc)
06:30:13 ________________ ERROR at setup of TestImage.testPixelSizeUnits ________________
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efed4c4f5e0>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efeaf7e1d30>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:13 self._send_request(method, url, body, headers, encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:13 self.endheaders(body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:13 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:13 self.send(msg)
06:30:13 /usr/lib64/python3.9/http/client.py:980: in send
06:30:13 self.connect()
06:30:13 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:13 super().connect()
06:30:13 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:13 self.sock = self._create_connection(
06:30:13 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:13 raise err
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 address = ('downloads.openmicroscopy.org', 443)
06:30:13 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:13 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:13 source_address=None):
06:30:13 """Connect to *address* and return the socket object.
06:30:13 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:13 port)``) and return the socket object. Passing the optional
06:30:13 *timeout* parameter will set the timeout on the socket instance
06:30:13 before attempting to connect. If no *timeout* is supplied, the
06:30:13 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:13 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:13 for the socket to bind as a source address before making the connection.
06:30:13 A host of '' or port 0 tells the OS to use the default.
06:30:13 """
06:30:13 host, port = address
06:30:13 err = None
06:30:13 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:13 af, socktype, proto, canonname, sa = res
06:30:13 sock = None
06:30:13 try:
06:30:13 sock = socket(af, socktype, proto)
06:30:13 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:13 sock.settimeout(timeout)
06:30:13 if source_address:
06:30:13 sock.bind(source_address)
06:30:13 > sock.connect(sa)
06:30:13 E TimeoutError: [Errno 110] Connection timed out
06:30:13 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:13 During handling of the above exception, another exception occurred:
06:30:13 request = <SubRequest 'author_testimg' for <Function testPixelSizeUnits>>
06:30:13 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efefa3b0400>
06:30:13 @pytest.fixture(scope='function')
06:30:13 def author_testimg(request, gatewaywrapper):
06:30:13 """
06:30:13 logs in as Author and returns the test image, creating it first if needed.
06:30:13 """
06:30:13 gatewaywrapper.loginAsAuthor()
06:30:13 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:13 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:13 i = IMAGES[alias].create()
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:13 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:13 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:13 return opener.open(url, data, timeout)
06:30:13 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:13 response = self._open(req, data)
06:30:13 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:13 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:13 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:13 result = func(*args)
06:30:13 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:13 return self.do_open(http.client.HTTPSConnection, req,
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efed4c4f5e0>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efeaf7e1d30>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 except OSError as err: # timeout error
06:30:13 > raise URLError(err)
06:30:13 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:13 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:13 ---------------------------- Captured stderr setup -----------------------------
06:30:13 2024-10-27 04:08:01,768 INFO [ omero.gateway] (MainThread) created connection (uuid=64456ce4-fc82-4025-b3bf-56750b5409af)
06:30:13 I<
06:30:13 ------------------------------ Captured log setup ------------------------------
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=64456ce4-fc82-4025-b3bf-56750b5409af)
06:30:13 ________________ ERROR at setup of TestImage.testUnitsGetValue _________________
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efef7c113d0>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efef7b2e1c0>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:13 self._send_request(method, url, body, headers, encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:13 self.endheaders(body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:13 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:13 self.send(msg)
06:30:13 /usr/lib64/python3.9/http/client.py:980: in send
06:30:13 self.connect()
06:30:13 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:13 super().connect()
06:30:13 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:13 self.sock = self._create_connection(
06:30:13 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:13 raise err
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 address = ('downloads.openmicroscopy.org', 443)
06:30:13 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:13 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:13 source_address=None):
06:30:13 """Connect to *address* and return the socket object.
06:30:13 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:13 port)``) and return the socket object. Passing the optional
06:30:13 *timeout* parameter will set the timeout on the socket instance
06:30:13 before attempting to connect. If no *timeout* is supplied, the
06:30:13 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:13 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:13 for the socket to bind as a source address before making the connection.
06:30:13 A host of '' or port 0 tells the OS to use the default.
06:30:13 """
06:30:13 host, port = address
06:30:13 err = None
06:30:13 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:13 af, socktype, proto, canonname, sa = res
06:30:13 sock = None
06:30:13 try:
06:30:13 sock = socket(af, socktype, proto)
06:30:13 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:13 sock.settimeout(timeout)
06:30:13 if source_address:
06:30:13 sock.bind(source_address)
06:30:13 > sock.connect(sa)
06:30:13 E TimeoutError: [Errno 110] Connection timed out
06:30:13 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:13 During handling of the above exception, another exception occurred:
06:30:13 request = <SubRequest 'author_testimg' for <Function testUnitsGetValue>>
06:30:13 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efefa3b0400>
06:30:13 @pytest.fixture(scope='function')
06:30:13 def author_testimg(request, gatewaywrapper):
06:30:13 """
06:30:13 logs in as Author and returns the test image, creating it first if needed.
06:30:13 """
06:30:13 gatewaywrapper.loginAsAuthor()
06:30:13 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:13 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:13 i = IMAGES[alias].create()
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:13 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:13 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:13 return opener.open(url, data, timeout)
06:30:13 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:13 response = self._open(req, data)
06:30:13 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:13 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:13 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:13 result = func(*args)
06:30:13 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:13 return self.do_open(http.client.HTTPSConnection, req,
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efef7c113d0>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efef7b2e1c0>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 except OSError as err: # timeout error
06:30:13 > raise URLError(err)
06:30:13 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:13 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:13 ---------------------------- Captured stderr setup -----------------------------
06:30:13 2024-10-27 04:10:12,848 INFO [ omero.gateway] (MainThread) created connection (uuid=9c179e85-2728-4f45-b320-262fd7e34ab7)
06:30:13 I<
06:30:13 ------------------------------ Captured log setup ------------------------------
06:30:13 INFO omero.gateway:__init__.py:2243 created connection (uuid=9c179e85-2728-4f45-b320-262fd7e34ab7)
06:30:13 ____________ ERROR at setup of TestImage.testChannelWavelengthUnits ____________
06:30:13 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:13 http_class = <class 'http.client.HTTPSConnection'>
06:30:13 req = <urllib.request.Request object at 0x7efef796cd60>
06:30:13 http_conn_args = {'check_hostname': None, 'context': None}
06:30:13 host = 'downloads.openmicroscopy.org'
06:30:13 h = <http.client.HTTPSConnection object at 0x7efeadd5c7f0>
06:30:13 def do_open(self, http_class, req, **http_conn_args):
06:30:13 """Return an HTTPResponse object for the request, using http_class.
06:30:13 http_class must implement the HTTPConnection API from http.client.
06:30:13 """
06:30:13 host = req.host
06:30:13 if not host:
06:30:13 raise URLError('no host given')
06:30:13 # will parse host:port
06:30:13 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:13 h.set_debuglevel(self._debuglevel)
06:30:13 headers = dict(req.unredirected_hdrs)
06:30:13 headers.update({k: v for k, v in req.headers.items()
06:30:13 if k not in headers})
06:30:13 # TODO(jhylton): Should this be redesigned to handle
06:30:13 # persistent connections?
06:30:13 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:13 # class isn't prepared to deal with a persistent connection.
06:30:13 # It will try to read all remaining data from the socket,
06:30:13 # which will block while the server waits for the next request.
06:30:13 # So make sure the connection gets closed after the (only)
06:30:13 # request.
06:30:13 headers["Connection"] = "close"
06:30:13 headers = {name.title(): val for name, val in headers.items()}
06:30:13 if req._tunnel_host:
06:30:13 tunnel_headers = {}
06:30:13 proxy_auth_hdr = "Proxy-Authorization"
06:30:13 if proxy_auth_hdr in headers:
06:30:13 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:13 # Proxy-Authorization should not be sent to origin
06:30:13 # server.
06:30:13 del headers[proxy_auth_hdr]
06:30:13 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:13 try:
06:30:13 try:
06:30:13 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:13 encode_chunked=req.has_header('Transfer-encoding'))
06:30:13 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:13 self._send_request(method, url, body, headers, encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:13 self.endheaders(body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:13 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:13 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:13 self.send(msg)
06:30:13 /usr/lib64/python3.9/http/client.py:980: in send
06:30:13 self.connect()
06:30:13 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:13 super().connect()
06:30:13 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:13 self.sock = self._create_connection(
06:30:13 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:13 raise err
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 address = ('downloads.openmicroscopy.org', 443)
06:30:13 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:13 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:13 source_address=None):
06:30:13 """Connect to *address* and return the socket object.
06:30:13 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:13 port)``) and return the socket object. Passing the optional
06:30:13 *timeout* parameter will set the timeout on the socket instance
06:30:13 before attempting to connect. If no *timeout* is supplied, the
06:30:13 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:13 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:13 for the socket to bind as a source address before making the connection.
06:30:13 A host of '' or port 0 tells the OS to use the default.
06:30:13 """
06:30:13 host, port = address
06:30:13 err = None
06:30:13 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:13 af, socktype, proto, canonname, sa = res
06:30:13 sock = None
06:30:13 try:
06:30:13 sock = socket(af, socktype, proto)
06:30:13 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:13 sock.settimeout(timeout)
06:30:13 if source_address:
06:30:13 sock.bind(source_address)
06:30:13 > sock.connect(sa)
06:30:13 E TimeoutError: [Errno 110] Connection timed out
06:30:13 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:13 During handling of the above exception, another exception occurred:
06:30:13 request = <SubRequest 'author_testimg' for <Function testChannelWavelengthUnits>>
06:30:13 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efefa3b0400>
06:30:13 @pytest.fixture(scope='function')
06:30:13 def author_testimg(request, gatewaywrapper):
06:30:13 """
06:30:13 logs in as Author and returns the test image, creating it first if needed.
06:30:13 """
06:30:13 gatewaywrapper.loginAsAuthor()
06:30:13 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:13 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:13 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:13 i = IMAGES[alias].create()
06:30:13 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:13 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef796cd60>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efeadd5c7f0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 04:12:24,446 INFO [ omero.gateway] (MainThread) created connection (uuid=afaafd6c-566a-4f94-928d-71f32920a3f1)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=afaafd6c-566a-4f94-928d-71f32920a3f1)
06:30:14 ______________ ERROR at setup of TestImage.testExposureTimeUnits _______________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efed70a6160>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efeae5e6130>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testExposureTimeUnits>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efefa3b0400>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efed70a6160>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efeae5e6130>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 04:14:35,005 INFO [ omero.gateway] (MainThread) created connection (uuid=e37524f9-caeb-4ae4-bfc0-eed12119d478)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=e37524f9-caeb-4ae4-bfc0-eed12119d478)
06:30:14 __________________ ERROR at setup of TestImage.testShortname ___________________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efecac9e460>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efef5401e20>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testShortname>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efefa3b0400>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efecac9e460>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efef5401e20>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 04:16:46,100 INFO [ omero.gateway] (MainThread) created connection (uuid=19d5f351-726b-4b8b-8a62-43920cf57edd)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=19d5f351-726b-4b8b-8a62-43920cf57edd)
06:30:14 __________________ ERROR at setup of TestImage.testImageDate ___________________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efed9d05910>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efed9d05340>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testImageDate>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efefa3b0400>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efed9d05910>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efed9d05340>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 04:18:57,140 INFO [ omero.gateway] (MainThread) created connection (uuid=565afb19-e941-405c-86a0-f5c2a87ccc07)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=565afb19-e941-405c-86a0-f5c2a87ccc07)
06:30:14 ________________ ERROR at setup of TestImage.testSimpleMarshal _________________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef540afa0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efed71f6520>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testSimpleMarshal>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efefa3b0400>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef540afa0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efed71f6520>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 04:21:08,271 INFO [ omero.gateway] (MainThread) created connection (uuid=c39eb3aa-c255-4e3a-90cd-658fc62c3ff4)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=c39eb3aa-c255-4e3a-90cd-658fc62c3ff4)
06:30:14 ____________________ ERROR at setup of TestImage.testExport ____________________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efed70c8910>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efe3f6ccd60>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testExport>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efefa3b0400>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efed70c8910>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efe3f6ccd60>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 04:23:19,292 INFO [ omero.gateway] (MainThread) created connection (uuid=baed3cee-c78f-4522-bd09-0416d67edbae)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=baed3cee-c78f-4522-bd09-0416d67edbae)
06:30:14 _______________ ERROR at setup of TestImage.testRenderJpegRegion _______________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef50532b0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efefa6b9730>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testRenderJpegRegion>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efefa3b0400>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef50532b0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efefa6b9730>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 04:25:30,343 INFO [ omero.gateway] (MainThread) created connection (uuid=1c6184e7-cfed-4734-b241-19247eed8b8d)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=1c6184e7-cfed-4734-b241-19247eed8b8d)
06:30:14 _________ ERROR at setup of TestImage.testRenderJpegRegion_resolution __________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efee3e798e0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efee3e79970>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testRenderJpegRegion_resolution>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efefa3b0400>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efee3e798e0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efee3e79970>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 04:27:41,849 INFO [ omero.gateway] (MainThread) created connection (uuid=4443f61f-5d67-4be2-b3a7-16282037ea8e)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=4443f61f-5d67-4be2-b3a7-16282037ea8e)
06:30:14 _____ ERROR at setup of TestImage.testRenderJpegRegion_invalid_resolution ______
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efeadd5cc10>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efee39b3340>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testRenderJpegRegion_invalid_resolution>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efefa3b0400>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efeadd5cc10>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efee39b3340>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 04:29:52,516 INFO [ omero.gateway] (MainThread) created connection (uuid=3a299055-e6c8-4f47-acb8-07c7c2470261)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=3a299055-e6c8-4f47-acb8-07c7c2470261)
06:30:14 ______________ ERROR at setup of TestImage.testRenderBirdsEyeView ______________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efed70c6790>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efed701feb0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testRenderBirdsEyeView>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efefa3b0400>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efed70c6790>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efed701feb0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 04:32:03,569 INFO [ omero.gateway] (MainThread) created connection (uuid=4ec06cc7-c976-4f0c-a31f-a1d1af2caa5b)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=4ec06cc7-c976-4f0c-a31f-a1d1af2caa5b)
06:30:14 ___________ ERROR at setup of TestImage.testRenderBirdsEyeView_Size ____________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efeafe34550>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efeafe34280>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testRenderBirdsEyeView_Size>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efefa3b0400>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efeafe34550>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efeafe34280>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 04:34:14,643 INFO [ omero.gateway] (MainThread) created connection (uuid=71ba941a-949f-4e54-aab5-e2a579ea04ef)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=71ba941a-949f-4e54-aab5-e2a579ea04ef)
06:30:14 _____________ ERROR at setup of TestPixels.testReuseRawPixelsStore _____________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efeaeb3aac0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efeaeb407c0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testReuseRawPixelsStore>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efed4a370d0>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efeaeb3aac0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efeaeb407c0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 04:36:43,790 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 04:36:43,796 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 04:36:43,837 INFO [ omero.gateway] (MainThread) created connection (uuid=c33183c5-2f13-42eb-98eb-1422cbb4c63c)
06:30:14 2024-10-27 04:36:44,465 INFO [ omero.gateway] (MainThread) created connection (uuid=e518b75f-689e-424d-b244-ec3e80818458)
06:30:14 2024-10-27 04:36:44,506 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 04:36:44,546 INFO [ omero.gateway] (MainThread) created connection (uuid=72754a1e-5d2d-49e7-ba84-0a28f9f4f8c5)
06:30:14 2024-10-27 04:36:44,586 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 04:36:44,626 INFO [ omero.gateway] (MainThread) created connection (uuid=2a9e7d35-61cf-4213-bc75-70e706b10b58)
06:30:14 2024-10-27 04:36:44,669 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 04:36:44,708 INFO [ omero.gateway] (MainThread) created connection (uuid=46693b8e-972f-4e7c-9c2c-1cc37a5d2132)
06:30:14 2024-10-27 04:36:44,748 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 04:36:44,790 INFO [ omero.gateway] (MainThread) created connection (uuid=bfaeb6b0-2547-402b-8a58-74c46bca0059)
06:30:14 2024-10-27 04:36:44,832 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 04:36:44,870 INFO [ omero.gateway] (MainThread) created connection (uuid=30320866-7977-443e-bb8c-e184887f2523)
06:30:14 2024-10-27 04:36:44,912 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 04:36:44,950 INFO [ omero.gateway] (MainThread) created connection (uuid=7b1ed704-4b76-410c-a045-f149511745cc)
06:30:14 2024-10-27 04:36:45,005 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 04:36:45,045 INFO [ omero.gateway] (MainThread) created connection (uuid=ed50d9eb-ec23-4d13-add4-22a90fa623fd)
06:30:14 2024-10-27 04:36:45,098 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 04:36:45,139 INFO [ omero.gateway] (MainThread) created connection (uuid=df90fdca-e314-4237-a865-cdae041cd3f9)
06:30:14 2024-10-27 04:36:45,186 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 04:36:45,190 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 04:36:45,230 INFO [ omero.gateway] (MainThread) created connection (uuid=1e7e7023-42be-42a2-ac41-1009c87d1c56)
06:30:14 2024-10-27 04:36:45,305 INFO [ omero.gateway] (MainThread) created connection (uuid=d197be62-3f74-49e4-8753-fd14c29e2d05)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=c33183c5-2f13-42eb-98eb-1422cbb4c63c)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=e518b75f-689e-424d-b244-ec3e80818458)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=72754a1e-5d2d-49e7-ba84-0a28f9f4f8c5)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=2a9e7d35-61cf-4213-bc75-70e706b10b58)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=46693b8e-972f-4e7c-9c2c-1cc37a5d2132)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=bfaeb6b0-2547-402b-8a58-74c46bca0059)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=30320866-7977-443e-bb8c-e184887f2523)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=7b1ed704-4b76-410c-a045-f149511745cc)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=ed50d9eb-ec23-4d13-add4-22a90fa623fd)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=df90fdca-e314-4237-a865-cdae041cd3f9)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=1e7e7023-42be-42a2-ac41-1009c87d1c56)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=d197be62-3f74-49e4-8753-fd14c29e2d05)
06:30:14 __________________ ERROR at setup of TestPixels.testPlaneInfo __________________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efee3a01a90>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efec873c3d0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testPlaneInfo>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efed4a370d0>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efee3a01a90>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efec873c3d0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 04:38:53,709 INFO [ omero.gateway] (MainThread) created connection (uuid=fd08d3a1-4824-4d9d-a2e3-1cdbe2a9548f)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=fd08d3a1-4824-4d9d-a2e3-1cdbe2a9548f)
06:30:14 _________________ ERROR at setup of TestPixels.testPixelsType __________________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef7c18370>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efef7f32f10>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testPixelsType>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efed4a370d0>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef7c18370>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efef7f32f10>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 04:41:04,233 INFO [ omero.gateway] (MainThread) created connection (uuid=ebf16358-21f8-44f7-a72e-7ffec0e74fa0)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=ebf16358-21f8-44f7-a72e-7ffec0e74fa0)
06:30:14 ___________________ ERROR at setup of TestPixels.testGetTile ___________________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efefa178310>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efefa178b20>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testGetTile>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efed4a370d0>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efefa178310>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efefa178b20>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 04:43:15,355 INFO [ omero.gateway] (MainThread) created connection (uuid=7a1ed2fa-2bf6-459d-a163-80ad85a19d16)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=7a1ed2fa-2bf6-459d-a163-80ad85a19d16)
06:30:14 __________________ ERROR at setup of TestPixels.testGetPlane ___________________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efeaf806f10>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efeca95ffd0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testGetPlane>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efed4a370d0>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efeaf806f10>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efeca95ffd0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 04:45:26,376 INFO [ omero.gateway] (MainThread) created connection (uuid=65607d9b-c7e3-44c0-b013-8ac1716498cf)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=65607d9b-c7e3-44c0-b013-8ac1716498cf)
06:30:14 ________ ERROR at setup of TestPixels.testGetPlanesExceptionOnGetPlane _________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efec34afb20>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efec3477610>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testGetPlanesExceptionOnGetPlane>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efed4a370d0>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efec34afb20>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efec3477610>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 04:47:37,517 INFO [ omero.gateway] (MainThread) created connection (uuid=e7593809-617d-41bf-a9a9-f5884ce3fed7)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=e7593809-617d-41bf-a9a9-f5884ce3fed7)
06:30:14 __________ ERROR at setup of TestPixels.testGetPlanesExceptionOnClose __________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efec3326ca0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efec33b1280>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testGetPlanesExceptionOnClose>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efed4a370d0>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efec3326ca0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efec33b1280>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 04:49:48,535 INFO [ omero.gateway] (MainThread) created connection (uuid=cc400a54-d938-40c7-a2eb-00e938f81b78)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=cc400a54-d938-40c7-a2eb-00e938f81b78)
06:30:14 __________ ERROR at setup of TestPixels.testGetPlanesExceptionOnBoth ___________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efec33ce2e0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efec33cedc0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testGetPlanesExceptionOnBoth>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efed4a370d0>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efec33ce2e0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efec33cedc0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 04:51:59,597 INFO [ omero.gateway] (MainThread) created connection (uuid=7bedef84-83e4-46c5-94de-a29578623cd5)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=7bedef84-83e4-46c5-94de-a29578623cd5)
06:30:14 ________________ ERROR at setup of TestPixels.testGetHistogram _________________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efed9eb49d0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efecaa07e80>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testGetHistogram>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efed4a370d0>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efed9eb49d0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efecaa07e80>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 04:54:11,062 INFO [ omero.gateway] (MainThread) created connection (uuid=ff439edf-fa8d-4ca8-9406-a79ed84a21de)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=ff439edf-fa8d-4ca8-9406-a79ed84a21de)
06:30:14 ___________________ ERROR at setup of TestRDefs.testDefault ____________________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef5719c70>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efec87375e0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testDefault>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efeaea21280>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef5719c70>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efec87375e0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 04:56:24,790 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 04:56:24,796 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 04:56:24,840 INFO [ omero.gateway] (MainThread) created connection (uuid=6318e422-d37c-453f-b9e7-5340367ab572)
06:30:14 2024-10-27 04:56:25,307 INFO [ omero.gateway] (MainThread) created connection (uuid=8e3e29d8-2eb6-4485-97dc-3bc6b30bf75b)
06:30:14 2024-10-27 04:56:25,344 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 04:56:25,384 INFO [ omero.gateway] (MainThread) created connection (uuid=98b7fd1d-fbf9-4620-b676-f901f4c08e3c)
06:30:14 2024-10-27 04:56:25,421 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 04:56:25,462 INFO [ omero.gateway] (MainThread) created connection (uuid=1b202dce-5fdd-48af-a62a-1b6cda6247d8)
06:30:14 2024-10-27 04:56:25,507 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 04:56:25,546 INFO [ omero.gateway] (MainThread) created connection (uuid=19eeecae-f22f-44f5-9dab-9c6bb8cf6124)
06:30:14 2024-10-27 04:56:25,591 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 04:56:25,631 INFO [ omero.gateway] (MainThread) created connection (uuid=687cb2ec-504f-416a-9db0-6bd56c164078)
06:30:14 2024-10-27 04:56:25,670 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 04:56:25,709 INFO [ omero.gateway] (MainThread) created connection (uuid=cc71181e-343d-4d23-90f5-95c8da71bd06)
06:30:14 2024-10-27 04:56:25,750 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 04:56:25,790 INFO [ omero.gateway] (MainThread) created connection (uuid=8d5d55ac-252e-4790-aabd-fcc8c0e2672c)
06:30:14 2024-10-27 04:56:25,839 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 04:56:25,882 INFO [ omero.gateway] (MainThread) created connection (uuid=ab9d9454-da35-47d8-9664-0facefccd737)
06:30:14 2024-10-27 04:56:25,934 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 04:56:25,975 INFO [ omero.gateway] (MainThread) created connection (uuid=8fc346b7-dd8f-4e29-aed2-82a23d6ad5dd)
06:30:14 2024-10-27 04:56:26,023 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 04:56:26,026 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 04:56:26,066 INFO [ omero.gateway] (MainThread) created connection (uuid=d1d2012b-ef8f-450f-9644-2fe33acea3b3)
06:30:14 2024-10-27 04:56:26,142 INFO [ omero.gateway] (MainThread) created connection (uuid=cc4dd57d-e1ce-4322-8d68-3a52b1c6d2a6)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=6318e422-d37c-453f-b9e7-5340367ab572)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=8e3e29d8-2eb6-4485-97dc-3bc6b30bf75b)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=98b7fd1d-fbf9-4620-b676-f901f4c08e3c)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=1b202dce-5fdd-48af-a62a-1b6cda6247d8)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=19eeecae-f22f-44f5-9dab-9c6bb8cf6124)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=687cb2ec-504f-416a-9db0-6bd56c164078)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=cc71181e-343d-4d23-90f5-95c8da71bd06)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=8d5d55ac-252e-4790-aabd-fcc8c0e2672c)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=ab9d9454-da35-47d8-9664-0facefccd737)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=8fc346b7-dd8f-4e29-aed2-82a23d6ad5dd)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=d1d2012b-ef8f-450f-9644-2fe33acea3b3)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=cc4dd57d-e1ce-4322-8d68-3a52b1c6d2a6)
06:30:14 __________________ ERROR at setup of TestRDefs.testCustomized __________________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7eff3d9d1370>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7eff3d302700>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testCustomized>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efeaea21280>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7eff3d9d1370>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7eff3d302700>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 04:58:36,916 INFO [ omero.gateway] (MainThread) created connection (uuid=984eaac7-bb7c-4cde-9096-1fb32ce08fe8)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=984eaac7-bb7c-4cde-9096-1fb32ce08fe8)
06:30:14 ________________ ERROR at setup of TestRDefs.testChannelWindows ________________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efefa6b0f40>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efefa6b06d0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testChannelWindows>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efeaea21280>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efefa6b0f40>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efefa6b06d0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 05:00:47,988 INFO [ omero.gateway] (MainThread) created connection (uuid=4d904068-3cfc-4f2a-a6ef-f4a52223364c)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=4d904068-3cfc-4f2a-a6ef-f4a52223364c)
06:30:14 ______________ ERROR at setup of TestRDefs.testFloatDefaultMinMax ______________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef7f12b80>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efef7f12e80>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testFloatDefaultMinMax>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efeaea21280>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef7f12b80>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efef7f12e80>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 05:02:59,044 INFO [ omero.gateway] (MainThread) created connection (uuid=89c97058-b208-48e2-b769-7636a4f72c1e)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=89c97058-b208-48e2-b769-7636a4f72c1e)
06:30:14 _________________ ERROR at setup of TestRDefs.testEmissionWave _________________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efecae28190>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efecae28070>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testEmissionWave>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efeaea21280>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efecae28190>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efecae28070>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 05:05:10,114 INFO [ omero.gateway] (MainThread) created connection (uuid=c896ed5f-0e7b-40df-bf6b-5251b17a49ee)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=c896ed5f-0e7b-40df-bf6b-5251b17a49ee)
06:30:14 __________________ ERROR at setup of TestRDefs.testBatchCopy ___________________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efed9ea12b0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efefa1e1df0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testBatchCopy>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efeaea21280>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efed9ea12b0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efefa1e1df0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 05:07:21,186 INFO [ omero.gateway] (MainThread) created connection (uuid=22729281-758d-4693-b63a-01cc68a41b37)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=22729281-758d-4693-b63a-01cc68a41b37)
06:30:14 ____________ ERROR at setup of TestRDefs.testGroupBasedPermissions _____________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef7964f10>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efee39be100>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testGroupBasedPermissions>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efeaea21280>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef7964f10>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efee39be100>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 05:09:32,259 INFO [ omero.gateway] (MainThread) created connection (uuid=b14e0a59-5f59-45eb-9a6e-635963073aa3)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=b14e0a59-5f59-45eb-9a6e-635963073aa3)
06:30:14 ___________________ ERROR at setup of TestRDefs.testGetRdefs ___________________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef7b1c580>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efef7b1c190>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testGetRdefs>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efeaea21280>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef7b1c580>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efef7b1c190>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 05:11:43,752 INFO [ omero.gateway] (MainThread) created connection (uuid=34939b79-b078-40cc-99a5-dbf51cdcfeac)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=34939b79-b078-40cc-99a5-dbf51cdcfeac)
06:30:14 ________________ ERROR at setup of TestRDefs.testResetDefaults _________________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efefa5c2850>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efefa5c2f70>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testResetDefaults>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efeaea21280>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efefa5c2850>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efefa5c2f70>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 05:13:54,407 INFO [ omero.gateway] (MainThread) created connection (uuid=9958cea0-6205-4466-a9a2-2a106cf2c22e)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=9958cea0-6205-4466-a9a2-2a106cf2c22e)
06:30:14 _____________ ERROR at setup of TestRDefs.testQuantizationSettings _____________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efecad27c40>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efecad27e50>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testQuantizationSettings>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efeaea21280>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efecad27c40>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efecad27e50>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 05:16:05,480 INFO [ omero.gateway] (MainThread) created connection (uuid=468f32bc-cb35-41a5-845f-8e3ab444663d)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=468f32bc-cb35-41a5-845f-8e3ab444663d)
06:30:14 _________ ERROR at setup of TestRDefs.testQuantizationSettingsInvalid __________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efeae599c70>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efeae599880>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testQuantizationSettingsInvalid>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efeaea21280>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efeae599c70>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efeae599880>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 05:18:16,547 INFO [ omero.gateway] (MainThread) created connection (uuid=58234524-489f-45de-b338-db5040325ba0)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=58234524-489f-45de-b338-db5040325ba0)
06:30:14 ___________ ERROR at setup of TestRDefs.testQuantizationSettingsBulk ___________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efed4e85340>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efef00f7fd0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testQuantizationSettingsBulk>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efeaea21280>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efed4e85340>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efef00f7fd0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 05:20:27,612 INFO [ omero.gateway] (MainThread) created connection (uuid=2c7748f2-c50e-4f25-b48b-0c0945c639f3)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=2c7748f2-c50e-4f25-b48b-0c0945c639f3)
06:30:14 _______________ ERROR at setup of TestRDefs.testGetChannelsNoRE ________________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efec3477430>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efec3477100>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testGetChannelsNoRE>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efeaea21280>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efec3477430>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efec3477100>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 05:22:38,694 INFO [ omero.gateway] (MainThread) created connection (uuid=633830ac-79e8-437a-b7c3-b233e8ae7005)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=633830ac-79e8-437a-b7c3-b233e8ae7005)
06:30:14 ____________ ERROR at setup of TestRDefs.testSetActiveChannelsNoRE _____________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef5514d60>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efeed922550>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testSetActiveChannelsNoRE>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efeaea21280>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef5514d60>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efeed922550>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 05:24:49,758 INFO [ omero.gateway] (MainThread) created connection (uuid=24d17c62-c75d-43cb-b19d-4a78293a8a6b)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=24d17c62-c75d-43cb-b19d-4a78293a8a6b)
06:30:14 ___________ ERROR at setup of TestRDefs.testSetActiveChannelsWithRE ____________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efeeddc7f70>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efef7962130>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testSetActiveChannelsWithRE>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efeaea21280>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efeeddc7f70>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efef7962130>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 05:27:00,827 INFO [ omero.gateway] (MainThread) created connection (uuid=41f3a52b-9ef7-4638-b483-1be4211ad36f)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=41f3a52b-9ef7-4638-b483-1be4211ad36f)
06:30:14 ___ ERROR at setup of TestRDefs.test_set_active_channels_set_inactive[True] ____
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efed720b9a0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efed720b1c0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function test_set_active_channels_set_inactive[True]>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efeaea21280>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efed720b9a0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efed720b1c0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 05:29:12,315 INFO [ omero.gateway] (MainThread) created connection (uuid=9607d815-2807-4934-8293-68021c37f991)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=9607d815-2807-4934-8293-68021c37f991)
06:30:14 ___ ERROR at setup of TestRDefs.test_set_active_channels_set_inactive[False] ___
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efec34a4be0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efeaf8067f0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function test_set_active_channels_set_inactive[False]>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efeaea21280>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efec34a4be0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efeaf8067f0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 05:31:22,979 INFO [ omero.gateway] (MainThread) created connection (uuid=b71e5011-dab6-4e06-a4f0-050e63052c0a)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=b71e5011-dab6-4e06-a4f0-050e63052c0a)
06:30:14 ______________ ERROR at setup of TestRDefs.testUnregisterService _______________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef54b0100>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efef54b0310>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testUnregisterService>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efeaea21280>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef54b0100>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efef54b0310>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 05:33:34,049 INFO [ omero.gateway] (MainThread) created connection (uuid=b1e130e2-39f7-4d87-9e11-6636be926283)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=b1e130e2-39f7-4d87-9e11-6636be926283)
06:30:14 _______________ ERROR at setup of TestRDefs.testRegisterService ________________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef7962310>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efeca953d60>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testRegisterService>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efeaea21280>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef7962310>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efeca953d60>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 05:35:45,118 INFO [ omero.gateway] (MainThread) created connection (uuid=de335dac-5f47-4379-b890-98882f494e87)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=de335dac-5f47-4379-b890-98882f494e87)
06:30:14 ___________________ ERROR at setup of TestRDefs.testCloseRE ____________________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efefa6c26a0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efefa6c23d0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testCloseRE>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efeaea21280>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efefa6c26a0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efefa6c23d0>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 05:37:56,229 INFO [ omero.gateway] (MainThread) created connection (uuid=c35deabe-1dc5-4c56-8403-21da85234011)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=c35deabe-1dc5-4c56-8403-21da85234011)
06:30:14 _____________ ERROR at setup of TestWrapper.testAllObjectsWrapped ______________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efeae54e220>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efeded29310>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testAllObjectsWrapped>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efed7211d90>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efeae54e220>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efeded29310>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 05:44:02,905 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 05:44:02,911 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 05:44:02,952 INFO [ omero.gateway] (MainThread) created connection (uuid=437c0c00-6f00-41fa-ae5e-24eb256a9b9e)
06:30:14 2024-10-27 05:44:03,512 INFO [ omero.gateway] (MainThread) created connection (uuid=9a934853-0515-4d36-b52d-58c85d8ccfa6)
06:30:14 2024-10-27 05:44:03,553 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 05:44:03,596 INFO [ omero.gateway] (MainThread) created connection (uuid=ebd3cdd5-2524-442b-8672-31454f246d61)
06:30:14 2024-10-27 05:44:03,647 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 05:44:03,694 INFO [ omero.gateway] (MainThread) created connection (uuid=14b2e719-9fa4-446e-aeee-97a76bff505c)
06:30:14 2024-10-27 05:44:03,742 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 05:44:03,785 INFO [ omero.gateway] (MainThread) created connection (uuid=3c50f7df-52ff-4307-a783-a453fcdb469e)
06:30:14 2024-10-27 05:44:03,828 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 05:44:03,872 INFO [ omero.gateway] (MainThread) created connection (uuid=cf45a8a0-1a59-4478-b0f3-62b8519887a0)
06:30:14 2024-10-27 05:44:03,920 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 05:44:03,969 INFO [ omero.gateway] (MainThread) created connection (uuid=4bd92846-1a23-4405-8cc5-e8fa876fe472)
06:30:14 2024-10-27 05:44:04,017 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 05:44:04,064 INFO [ omero.gateway] (MainThread) created connection (uuid=5e6fba10-da5b-4e8c-8e13-6acf681ac1da)
06:30:14 2024-10-27 05:44:04,127 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 05:44:04,176 INFO [ omero.gateway] (MainThread) created connection (uuid=a4c21d32-6d13-4e93-b559-0842d026548a)
06:30:14 2024-10-27 05:44:04,235 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 05:44:04,279 INFO [ omero.gateway] (MainThread) created connection (uuid=dccf2809-49d3-429e-8b17-b8638b3944d4)
06:30:14 2024-10-27 05:44:04,334 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 05:44:04,340 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 05:44:04,391 INFO [ omero.gateway] (MainThread) created connection (uuid=37a06a74-f29f-44f6-9b8a-b2cc3f434863)
06:30:14 2024-10-27 05:44:04,467 INFO [ omero.gateway] (MainThread) created connection (uuid=a2e7edc1-9ec2-4333-a69d-59dadf290e69)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=437c0c00-6f00-41fa-ae5e-24eb256a9b9e)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=9a934853-0515-4d36-b52d-58c85d8ccfa6)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=ebd3cdd5-2524-442b-8672-31454f246d61)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=14b2e719-9fa4-446e-aeee-97a76bff505c)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=3c50f7df-52ff-4307-a783-a453fcdb469e)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=cf45a8a0-1a59-4478-b0f3-62b8519887a0)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=4bd92846-1a23-4405-8cc5-e8fa876fe472)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=5e6fba10-da5b-4e8c-8e13-6acf681ac1da)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=a4c21d32-6d13-4e93-b559-0842d026548a)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=dccf2809-49d3-429e-8b17-b8638b3944d4)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=37a06a74-f29f-44f6-9b8a-b2cc3f434863)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=a2e7edc1-9ec2-4333-a69d-59dadf290e69)
06:30:14 _______________ ERROR at setup of TestWrapper.testDatasetWrapper _______________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef05e72e0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efeae57dd90>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testDatasetWrapper>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efed7211d90>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef05e72e0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efeae57dd90>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 05:46:16,672 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 05:46:16,716 INFO [ omero.gateway] (MainThread) created connection (uuid=11c8cfba-22f0-4aba-a0ce-9aa6bd1af408)
06:30:14 2024-10-27 05:46:16,798 INFO [ omero.gateway] (MainThread) created connection (uuid=f8ddaf4c-4dbf-40da-9b49-39c79729f983)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=11c8cfba-22f0-4aba-a0ce-9aa6bd1af408)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=f8ddaf4c-4dbf-40da-9b49-39c79729f983)
06:30:14 _______________ ERROR at setup of TestWrapper.testDetailsWrapper _______________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef05f87c0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efef05f8a60>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 request = <SubRequest 'author_testimg' for <Function testDetailsWrapper>>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efed7211d90>
06:30:14 @pytest.fixture(scope='function')
06:30:14 def author_testimg(request, gatewaywrapper):
06:30:14 """
06:30:14 logs in as Author and returns the test image, creating it first if needed.
06:30:14 """
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > rv = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef05f87c0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efef05f8a60>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ---------------------------- Captured stderr setup -----------------------------
06:30:14 2024-10-27 05:48:26,996 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 05:48:27,042 INFO [ omero.gateway] (MainThread) created connection (uuid=8d7e0a7e-2ad0-4d02-bca7-6fc71bc54a3f)
06:30:14 2024-10-27 05:48:27,135 INFO [ omero.gateway] (MainThread) created connection (uuid=bcebcb65-605a-4166-aff7-acced0ca2d0a)
06:30:14 I<
06:30:14 ------------------------------ Captured log setup ------------------------------
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=8d7e0a7e-2ad0-4d02-bca7-6fc71bc54a3f)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=bcebcb65-605a-4166-aff7-acced0ca2d0a)
06:30:14 =================================== FAILURES ===================================
06:30:14 _________________________ TestAdmin.test_checkupgrade0 _________________________
06:30:14 self = <test.integration.clitest.test_admin.TestAdmin object at 0x7eff3db087c0>
06:30:14 monkeypatch = <_pytest.monkeypatch.MonkeyPatch object at 0x7eff15b38a90>
06:30:14 def test_checkupgrade0(self, monkeypatch):
06:30:14 monkeypatch.setattr(omero.plugins.prefs, "UpgradeCheck",
06:30:14 createUpgradeCheckClass("999999999.0.0"))
06:30:14 self.args.append("checkupgrade")
06:30:14 > self.go()
06:30:14 test/integration/clitest/test_admin.py:66:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 test/integration/clitest/test_admin.py:60: in go
06:30:14 self.cli.invoke(self.args, strict=True)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/cli.py:1211: in invoke
06:30:14 self.assertRC()
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <omero.cli.CLI object at 0x7eff4304bbe0>
06:30:14 def assertRC(self):
06:30:14 if self.rv != 0:
06:30:14 > raise NonZeroReturnCode(self.rv, "assert failed")
06:30:14 E omero.cli.NonZeroReturnCode: assert failed
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/cli.py:1200: NonZeroReturnCode
06:30:14 ----------------------------- Captured stdout call -----------------------------
06:30:14 HTTPConnectionPool(host='upgrade.openmicroscopy.org.uk', port=80): Max retries exceeded with url: /?version=999999999.0.0&os.name=Linux&os.arch=x86_64&os.version=Linux-5.14.0-427.40.1.el9_4.x86_64-x86_64-with-glibc2.34&python.version=3.9.18&python.compiler=GCC+11.4.1+20231218+%28Red+Hat+11.4.1-3%29&python.build=main&python.build=Aug+23+2024+00%3A00%3A00 (Caused by ConnectTimeoutError(<urllib3.connection.HTTPConnection object at 0x7eff15b6caf0>, 'Connection to upgrade.openmicroscopy.org.uk timed out. (connect timeout=6.0)'))
06:30:14 ----------------------------- Captured stderr call -----------------------------
06:30:14 Error printing text
06:30:14 ------------------------------ Captured log call -------------------------------
06:30:14 ERROR omero.util.UpgradeCheck:upgrade_check.py:141 HTTPConnectionPool(host='upgrade.openmicroscopy.org.uk', port=80): Max retries exceeded with url: /?version=999999999.0.0&os.name=Linux&os.arch=x86_64&os.version=Linux-5.14.0-427.40.1.el9_4.x86_64-x86_64-with-glibc2.34&python.version=3.9.18&python.compiler=GCC+11.4.1+20231218+%28Red+Hat+11.4.1-3%29&python.build=main&python.build=Aug+23+2024+00%3A00%3A00 (Caused by ConnectTimeoutError(<urllib3.connection.HTTPConnection object at 0x7eff15b6caf0>, 'Connection to upgrade.openmicroscopy.org.uk timed out. (connect timeout=6.0)'))
06:30:14 _________________________ TestAdmin.test_checkupgrade1 _________________________
06:30:14 self = <test.integration.clitest.test_admin.TestAdmin object at 0x7eff3db08b20>
06:30:14 monkeypatch = <_pytest.monkeypatch.MonkeyPatch object at 0x7eff15b6c460>
06:30:14 def test_checkupgrade1(self, monkeypatch):
06:30:14 monkeypatch.setattr(omero.plugins.prefs, "UpgradeCheck",
06:30:14 createUpgradeCheckClass("0.0.0"))
06:30:14 self.args.append("checkupgrade")
06:30:14 with pytest.raises(NonZeroReturnCode) as exc:
06:30:14 self.go()
06:30:14 > assert exc.value.rv == 1
06:30:14 E AssertionError: assert 2 == 1
06:30:14 E + where 2 = NonZeroReturnCode('assert failed').rv
06:30:14 E + where NonZeroReturnCode('assert failed') = <ExceptionInfo NonZeroReturnCode('assert failed') tblen=4>.value
06:30:14 test/integration/clitest/test_admin.py:74: AssertionError
06:30:14 ----------------------------- Captured stdout call -----------------------------
06:30:14 HTTPConnectionPool(host='upgrade.openmicroscopy.org.uk', port=80): Max retries exceeded with url: /?version=0.0.0&os.name=Linux&os.arch=x86_64&os.version=Linux-5.14.0-427.40.1.el9_4.x86_64-x86_64-with-glibc2.34&python.version=3.9.18&python.compiler=GCC+11.4.1+20231218+%28Red+Hat+11.4.1-3%29&python.build=main&python.build=Aug+23+2024+00%3A00%3A00 (Caused by ConnectTimeoutError(<urllib3.connection.HTTPConnection object at 0x7eff01efcc10>, 'Connection to upgrade.openmicroscopy.org.uk timed out. (connect timeout=6.0)'))
06:30:14 ----------------------------- Captured stderr call -----------------------------
06:30:14 Error printing text
06:30:14 ------------------------------ Captured log call -------------------------------
06:30:14 ERROR omero.util.UpgradeCheck:upgrade_check.py:141 HTTPConnectionPool(host='upgrade.openmicroscopy.org.uk', port=80): Max retries exceeded with url: /?version=0.0.0&os.name=Linux&os.arch=x86_64&os.version=Linux-5.14.0-427.40.1.el9_4.x86_64-x86_64-with-glibc2.34&python.version=3.9.18&python.compiler=GCC+11.4.1+20231218+%28Red+Hat+11.4.1-3%29&python.build=main&python.build=Aug+23+2024+00%3A00%3A00 (Caused by ConnectTimeoutError(<urllib3.connection.HTTPConnection object at 0x7eff01efcc10>, 'Connection to upgrade.openmicroscopy.org.uk timed out. (connect timeout=6.0)'))
06:30:14 _________________ TestAdminRestrictedAdmin.test_checkupgrade0 __________________
06:30:14 self = <test.integration.clitest.test_admin.TestAdminRestrictedAdmin object at 0x7eff3db169d0>
06:30:14 monkeypatch = <_pytest.monkeypatch.MonkeyPatch object at 0x7eff0e319760>
06:30:14 def test_checkupgrade0(self, monkeypatch):
06:30:14 monkeypatch.setattr(omero.plugins.prefs, "UpgradeCheck",
06:30:14 createUpgradeCheckClass("999999999.0.0"))
06:30:14 self.args.append("checkupgrade")
06:30:14 > self.cli.invoke(self.args, strict=True)
06:30:14 test/integration/clitest/test_admin.py:134:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/cli.py:1211: in invoke
06:30:14 self.assertRC()
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <omero.cli.CLI object at 0x7eff01f5aa00>
06:30:14 def assertRC(self):
06:30:14 if self.rv != 0:
06:30:14 > raise NonZeroReturnCode(self.rv, "assert failed")
06:30:14 E omero.cli.NonZeroReturnCode: assert failed
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/cli.py:1200: NonZeroReturnCode
06:30:14 ----------------------------- Captured stdout call -----------------------------
06:30:14 HTTPConnectionPool(host='upgrade.openmicroscopy.org.uk', port=80): Max retries exceeded with url: /?version=999999999.0.0&os.name=Linux&os.arch=x86_64&os.version=Linux-5.14.0-427.40.1.el9_4.x86_64-x86_64-with-glibc2.34&python.version=3.9.18&python.compiler=GCC+11.4.1+20231218+%28Red+Hat+11.4.1-3%29&python.build=main&python.build=Aug+23+2024+00%3A00%3A00 (Caused by ConnectTimeoutError(<urllib3.connection.HTTPConnection object at 0x7eff0e2c7a30>, 'Connection to upgrade.openmicroscopy.org.uk timed out. (connect timeout=6.0)'))
06:30:14 ----------------------------- Captured stderr call -----------------------------
06:30:14 Error printing text
06:30:14 ------------------------------ Captured log call -------------------------------
06:30:14 ERROR omero.util.UpgradeCheck:upgrade_check.py:141 HTTPConnectionPool(host='upgrade.openmicroscopy.org.uk', port=80): Max retries exceeded with url: /?version=999999999.0.0&os.name=Linux&os.arch=x86_64&os.version=Linux-5.14.0-427.40.1.el9_4.x86_64-x86_64-with-glibc2.34&python.version=3.9.18&python.compiler=GCC+11.4.1+20231218+%28Red+Hat+11.4.1-3%29&python.build=main&python.build=Aug+23+2024+00%3A00%3A00 (Caused by ConnectTimeoutError(<urllib3.connection.HTTPConnection object at 0x7eff0e2c7a30>, 'Connection to upgrade.openmicroscopy.org.uk timed out. (connect timeout=6.0)'))
06:30:14 _________________ TestAdminRestrictedAdmin.test_checkupgrade1 __________________
06:30:14 self = <test.integration.clitest.test_admin.TestAdminRestrictedAdmin object at 0x7eff3db16d90>
06:30:14 monkeypatch = <_pytest.monkeypatch.MonkeyPatch object at 0x7eff0e36bfa0>
06:30:14 def test_checkupgrade1(self, monkeypatch):
06:30:14 monkeypatch.setattr(omero.plugins.prefs, "UpgradeCheck",
06:30:14 createUpgradeCheckClass("0.0.0"))
06:30:14 self.args.append("checkupgrade")
06:30:14 with pytest.raises(NonZeroReturnCode) as exc:
06:30:14 self.cli.invoke(self.args, strict=True)
06:30:14 > assert exc.value.rv == 1
06:30:14 E AssertionError: assert 2 == 1
06:30:14 E + where 2 = NonZeroReturnCode('assert failed').rv
06:30:14 E + where NonZeroReturnCode('assert failed') = <ExceptionInfo NonZeroReturnCode('assert failed') tblen=3>.value
06:30:14 test/integration/clitest/test_admin.py:142: AssertionError
06:30:14 ----------------------------- Captured stdout call -----------------------------
06:30:14 HTTPConnectionPool(host='upgrade.openmicroscopy.org.uk', port=80): Max retries exceeded with url: /?version=0.0.0&os.name=Linux&os.arch=x86_64&os.version=Linux-5.14.0-427.40.1.el9_4.x86_64-x86_64-with-glibc2.34&python.version=3.9.18&python.compiler=GCC+11.4.1+20231218+%28Red+Hat+11.4.1-3%29&python.build=main&python.build=Aug+23+2024+00%3A00%3A00 (Caused by ConnectTimeoutError(<urllib3.connection.HTTPConnection object at 0x7eff0e2de0d0>, 'Connection to upgrade.openmicroscopy.org.uk timed out. (connect timeout=6.0)'))
06:30:14 ----------------------------- Captured stderr call -----------------------------
06:30:14 Error printing text
06:30:14 ------------------------------ Captured log call -------------------------------
06:30:14 ERROR omero.util.UpgradeCheck:upgrade_check.py:141 HTTPConnectionPool(host='upgrade.openmicroscopy.org.uk', port=80): Max retries exceeded with url: /?version=0.0.0&os.name=Linux&os.arch=x86_64&os.version=Linux-5.14.0-427.40.1.el9_4.x86_64-x86_64-with-glibc2.34&python.version=3.9.18&python.compiler=GCC+11.4.1+20231218+%28Red+Hat+11.4.1-3%29&python.build=main&python.build=Aug+23+2024+00%3A00%3A00 (Caused by ConnectTimeoutError(<urllib3.connection.HTTPConnection object at 0x7eff0e2de0d0>, 'Connection to upgrade.openmicroscopy.org.uk timed out. (connect timeout=6.0)'))
06:30:14 _____________ TestGetObject.testGetObjectsByMapAnnotations[Image] ______________
06:30:14 self = <test.integration.gatewaytest.test_get_objects.TestGetObject object at 0x7eff3d18d610>
06:30:14 datatype = 'Image'
06:30:14 @pytest.mark.parametrize("datatype", ['Image', 'Dataset', 'Project',
06:30:14 'Screen', 'Plate'])
06:30:14 def testGetObjectsByMapAnnotations(self, datatype):
06:30:14 > client, exp = self.new_client_and_user()
06:30:14 test/integration/gatewaytest/test_get_objects.py:767:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/testlib/__init__.py:604: in new_client_and_user
06:30:14 user = self.new_user(group, owner=owner, system=system, perms=perms,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/testlib/__init__.py:526: in new_user
06:30:14 admin_service = cls.root.getSession().getAdminService()
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = session-d6eebb8b-c9ae-4b5e-a501-a1c22760b62f/aab187c0-4750-4e2a-b5c3-216047abf64d -t -e 1.1 @ BlitzAdapters
06:30:14 _ctx = None
06:30:14 def getAdminService(self, _ctx=None):
06:30:14 > return _M_omero.api.ServiceFactory._op_getAdminService.invoke(self, ((), _ctx))
06:30:14 E Ice.ConnectionLostException: Ice.ConnectionLostException:
06:30:14 E recv() returned zero
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero_API_ice.py:704: ConnectionLostException
06:30:14 ____________ TestGetObject.testGetObjectsByMapAnnotations[Dataset] _____________
06:30:14 self = <test.integration.gatewaytest.test_get_objects.TestGetObject object at 0x7eff3d1e6130>
06:30:14 datatype = 'Dataset'
06:30:14 @pytest.mark.parametrize("datatype", ['Image', 'Dataset', 'Project',
06:30:14 'Screen', 'Plate'])
06:30:14 def testGetObjectsByMapAnnotations(self, datatype):
06:30:14 > client, exp = self.new_client_and_user()
06:30:14 test/integration/gatewaytest/test_get_objects.py:767:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/testlib/__init__.py:604: in new_client_and_user
06:30:14 user = self.new_user(group, owner=owner, system=system, perms=perms,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/testlib/__init__.py:526: in new_user
06:30:14 admin_service = cls.root.getSession().getAdminService()
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = session-d6eebb8b-c9ae-4b5e-a501-a1c22760b62f/aab187c0-4750-4e2a-b5c3-216047abf64d -t -e 1.1 @ BlitzAdapters
06:30:14 _ctx = None
06:30:14 def getAdminService(self, _ctx=None):
06:30:14 > return _M_omero.api.ServiceFactory._op_getAdminService.invoke(self, ((), _ctx))
06:30:14 E Ice.ConnectionLostException: Ice.ConnectionLostException:
06:30:14 E recv() returned zero
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero_API_ice.py:704: ConnectionLostException
06:30:14 ____________ TestGetObject.testGetObjectsByMapAnnotations[Project] _____________
06:30:14 self = <test.integration.gatewaytest.test_get_objects.TestGetObject object at 0x7eff3ccaf970>
06:30:14 datatype = 'Project'
06:30:14 @pytest.mark.parametrize("datatype", ['Image', 'Dataset', 'Project',
06:30:14 'Screen', 'Plate'])
06:30:14 def testGetObjectsByMapAnnotations(self, datatype):
06:30:14 > client, exp = self.new_client_and_user()
06:30:14 test/integration/gatewaytest/test_get_objects.py:767:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/testlib/__init__.py:604: in new_client_and_user
06:30:14 user = self.new_user(group, owner=owner, system=system, perms=perms,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/testlib/__init__.py:526: in new_user
06:30:14 admin_service = cls.root.getSession().getAdminService()
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = session-d6eebb8b-c9ae-4b5e-a501-a1c22760b62f/aab187c0-4750-4e2a-b5c3-216047abf64d -t -e 1.1 @ BlitzAdapters
06:30:14 _ctx = None
06:30:14 def getAdminService(self, _ctx=None):
06:30:14 > return _M_omero.api.ServiceFactory._op_getAdminService.invoke(self, ((), _ctx))
06:30:14 E Ice.ConnectionLostException: Ice.ConnectionLostException:
06:30:14 E recv() returned zero
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero_API_ice.py:704: ConnectionLostException
06:30:14 _____________ TestGetObject.testGetObjectsByMapAnnotations[Screen] _____________
06:30:14 self = <test.integration.gatewaytest.test_get_objects.TestGetObject object at 0x7eff3ccafa30>
06:30:14 datatype = 'Screen'
06:30:14 @pytest.mark.parametrize("datatype", ['Image', 'Dataset', 'Project',
06:30:14 'Screen', 'Plate'])
06:30:14 def testGetObjectsByMapAnnotations(self, datatype):
06:30:14 > client, exp = self.new_client_and_user()
06:30:14 test/integration/gatewaytest/test_get_objects.py:767:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/testlib/__init__.py:604: in new_client_and_user
06:30:14 user = self.new_user(group, owner=owner, system=system, perms=perms,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/testlib/__init__.py:526: in new_user
06:30:14 admin_service = cls.root.getSession().getAdminService()
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = session-d6eebb8b-c9ae-4b5e-a501-a1c22760b62f/aab187c0-4750-4e2a-b5c3-216047abf64d -t -e 1.1 @ BlitzAdapters
06:30:14 _ctx = None
06:30:14 def getAdminService(self, _ctx=None):
06:30:14 > return _M_omero.api.ServiceFactory._op_getAdminService.invoke(self, ((), _ctx))
06:30:14 E Ice.ConnectionLostException: Ice.ConnectionLostException:
06:30:14 E recv() returned zero
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero_API_ice.py:704: ConnectionLostException
06:30:14 _____________ TestGetObject.testGetObjectsByMapAnnotations[Plate] ______________
06:30:14 self = <test.integration.gatewaytest.test_get_objects.TestGetObject object at 0x7eff3ccafaf0>
06:30:14 datatype = 'Plate'
06:30:14 @pytest.mark.parametrize("datatype", ['Image', 'Dataset', 'Project',
06:30:14 'Screen', 'Plate'])
06:30:14 def testGetObjectsByMapAnnotations(self, datatype):
06:30:14 > client, exp = self.new_client_and_user()
06:30:14 test/integration/gatewaytest/test_get_objects.py:767:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/testlib/__init__.py:604: in new_client_and_user
06:30:14 user = self.new_user(group, owner=owner, system=system, perms=perms,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/testlib/__init__.py:526: in new_user
06:30:14 admin_service = cls.root.getSession().getAdminService()
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = session-d6eebb8b-c9ae-4b5e-a501-a1c22760b62f/aab187c0-4750-4e2a-b5c3-216047abf64d -t -e 1.1 @ BlitzAdapters
06:30:14 _ctx = None
06:30:14 def getAdminService(self, _ctx=None):
06:30:14 > return _M_omero.api.ServiceFactory._op_getAdminService.invoke(self, ((), _ctx))
06:30:14 E Ice.ConnectionLostException: Ice.ConnectionLostException:
06:30:14 E recv() returned zero
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero_API_ice.py:704: ConnectionLostException
06:30:14 --------------------------- Captured stderr teardown ---------------------------
06:30:14 2024-10-27 03:52:23,483 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 *2024-10-27 03:52:23,536 INFO [ omero.gateway] (MainThread) created connection (uuid=e901f13d-150c-453d-bc2e-a6f137e212f6)
06:30:14 *2024-10-27 03:52:23,665 INFO [ omero.gateway] (MainThread) created connection (uuid=218b688d-c2d3-4944-aa84-db8160369836)
06:30:14 *2024-10-27 03:52:23,787 INFO [ omero.gateway] (MainThread) created connection (uuid=c1432359-a963-4718-b17a-dae738fe19d9)
06:30:14 *2024-10-27 03:52:23,878 INFO [ omero.gateway] (MainThread) created connection (uuid=ac22e6de-9f47-4323-b092-18d09c23cf32)
06:30:14 *2024-10-27 03:52:23,978 INFO [ omero.gateway] (MainThread) created connection (uuid=fa2dc537-e28e-4546-9946-69d9a14dcc2d)
06:30:14 *2024-10-27 03:52:24,079 INFO [ omero.gateway] (MainThread) created connection (uuid=b9d12aee-e570-4e61-a85c-128a6b3f766b)
06:30:14 2024-10-27 03:52:24,132 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 03:52:24,139 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 03:52:24,188 INFO [ omero.gateway] (MainThread) created connection (uuid=de00f299-c422-403a-ad93-68581a05ae60)
06:30:14 2024-10-27 03:52:24,495 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 03:52:24,500 WARNI [ omero.client] (MainThread) Cannot get session service for killSession. Using closeSession
06:30:14 ---------------------------- Captured log teardown -----------------------------
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=e901f13d-150c-453d-bc2e-a6f137e212f6)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=218b688d-c2d3-4944-aa84-db8160369836)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=c1432359-a963-4718-b17a-dae738fe19d9)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=ac22e6de-9f47-4323-b092-18d09c23cf32)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=fa2dc537-e28e-4546-9946-69d9a14dcc2d)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=b9d12aee-e570-4e61-a85c-128a6b3f766b)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=de00f299-c422-403a-ad93-68581a05ae60)
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 WARNING omero.client:clients.py:1095 Cannot get session service for killSession. Using closeSession
06:30:14 _____________________________ TestUser.testSaveAs ______________________________
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef28687f0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efeafa8f970>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 > h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 /usr/lib64/python3.9/urllib/request.py:1346:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 /usr/lib64/python3.9/http/client.py:1285: in request
06:30:14 self._send_request(method, url, body, headers, encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1331: in _send_request
06:30:14 self.endheaders(body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1280: in endheaders
06:30:14 self._send_output(message_body, encode_chunked=encode_chunked)
06:30:14 /usr/lib64/python3.9/http/client.py:1040: in _send_output
06:30:14 self.send(msg)
06:30:14 /usr/lib64/python3.9/http/client.py:980: in send
06:30:14 self.connect()
06:30:14 /usr/lib64/python3.9/http/client.py:1447: in connect
06:30:14 super().connect()
06:30:14 /usr/lib64/python3.9/http/client.py:946: in connect
06:30:14 self.sock = self._create_connection(
06:30:14 /usr/lib64/python3.9/socket.py:844: in create_connection
06:30:14 raise err
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 address = ('downloads.openmicroscopy.org', 443)
06:30:14 timeout = <object object at 0x7eff421c8b40>, source_address = None
06:30:14 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT,
06:30:14 source_address=None):
06:30:14 """Connect to *address* and return the socket object.
06:30:14 Convenience function. Connect to *address* (a 2-tuple ``(host,
06:30:14 port)``) and return the socket object. Passing the optional
06:30:14 *timeout* parameter will set the timeout on the socket instance
06:30:14 before attempting to connect. If no *timeout* is supplied, the
06:30:14 global default timeout setting returned by :func:`getdefaulttimeout`
06:30:14 is used. If *source_address* is set it must be a tuple of (host, port)
06:30:14 for the socket to bind as a source address before making the connection.
06:30:14 A host of '' or port 0 tells the OS to use the default.
06:30:14 """
06:30:14 host, port = address
06:30:14 err = None
06:30:14 for res in getaddrinfo(host, port, 0, SOCK_STREAM):
06:30:14 af, socktype, proto, canonname, sa = res
06:30:14 sock = None
06:30:14 try:
06:30:14 sock = socket(af, socktype, proto)
06:30:14 if timeout is not _GLOBAL_DEFAULT_TIMEOUT:
06:30:14 sock.settimeout(timeout)
06:30:14 if source_address:
06:30:14 sock.bind(source_address)
06:30:14 > sock.connect(sa)
06:30:14 E TimeoutError: [Errno 110] Connection timed out
06:30:14 /usr/lib64/python3.9/socket.py:832: TimeoutError
06:30:14 During handling of the above exception, another exception occurred:
06:30:14 self = <test.integration.gatewaytest.test_user.TestUser object at 0x7eff3ce2a3a0>
06:30:14 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7efefa206e20>
06:30:14 def testSaveAs(self, gatewaywrapper):
06:30:14 for u in (gatewaywrapper.AUTHOR, gatewaywrapper.ADMIN):
06:30:14 # Test image should be owned by author
06:30:14 gatewaywrapper.loginAsAuthor()
06:30:14 > image = gatewaywrapper.getTestImage(autocreate=True)
06:30:14 test/integration/gatewaytest/test_user.py:34:
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage
06:30:14 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset,
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage
06:30:14 i = IMAGES[alias].create()
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create
06:30:14 fin = urllib.request.urlopen(TESTIMG_URL + self.filename)
06:30:14 /usr/lib64/python3.9/urllib/request.py:214: in urlopen
06:30:14 return opener.open(url, data, timeout)
06:30:14 /usr/lib64/python3.9/urllib/request.py:517: in open
06:30:14 response = self._open(req, data)
06:30:14 /usr/lib64/python3.9/urllib/request.py:534: in _open
06:30:14 result = self._call_chain(self.handle_open, protocol, protocol +
06:30:14 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain
06:30:14 result = func(*args)
06:30:14 /usr/lib64/python3.9/urllib/request.py:1389: in https_open
06:30:14 return self.do_open(http.client.HTTPSConnection, req,
06:30:14 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
06:30:14 self = <urllib.request.HTTPSHandler object at 0x7efee39f0550>
06:30:14 http_class = <class 'http.client.HTTPSConnection'>
06:30:14 req = <urllib.request.Request object at 0x7efef28687f0>
06:30:14 http_conn_args = {'check_hostname': None, 'context': None}
06:30:14 host = 'downloads.openmicroscopy.org'
06:30:14 h = <http.client.HTTPSConnection object at 0x7efeafa8f970>
06:30:14 def do_open(self, http_class, req, **http_conn_args):
06:30:14 """Return an HTTPResponse object for the request, using http_class.
06:30:14 http_class must implement the HTTPConnection API from http.client.
06:30:14 """
06:30:14 host = req.host
06:30:14 if not host:
06:30:14 raise URLError('no host given')
06:30:14 # will parse host:port
06:30:14 h = http_class(host, timeout=req.timeout, **http_conn_args)
06:30:14 h.set_debuglevel(self._debuglevel)
06:30:14 headers = dict(req.unredirected_hdrs)
06:30:14 headers.update({k: v for k, v in req.headers.items()
06:30:14 if k not in headers})
06:30:14 # TODO(jhylton): Should this be redesigned to handle
06:30:14 # persistent connections?
06:30:14 # We want to make an HTTP/1.1 request, but the addinfourl
06:30:14 # class isn't prepared to deal with a persistent connection.
06:30:14 # It will try to read all remaining data from the socket,
06:30:14 # which will block while the server waits for the next request.
06:30:14 # So make sure the connection gets closed after the (only)
06:30:14 # request.
06:30:14 headers["Connection"] = "close"
06:30:14 headers = {name.title(): val for name, val in headers.items()}
06:30:14 if req._tunnel_host:
06:30:14 tunnel_headers = {}
06:30:14 proxy_auth_hdr = "Proxy-Authorization"
06:30:14 if proxy_auth_hdr in headers:
06:30:14 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr]
06:30:14 # Proxy-Authorization should not be sent to origin
06:30:14 # server.
06:30:14 del headers[proxy_auth_hdr]
06:30:14 h.set_tunnel(req._tunnel_host, headers=tunnel_headers)
06:30:14 try:
06:30:14 try:
06:30:14 h.request(req.get_method(), req.selector, req.data, headers,
06:30:14 encode_chunked=req.has_header('Transfer-encoding'))
06:30:14 except OSError as err: # timeout error
06:30:14 > raise URLError(err)
06:30:14 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 /usr/lib64/python3.9/urllib/request.py:1349: URLError
06:30:14 ----------------------------- Captured stderr call -----------------------------
06:30:14 2024-10-27 05:41:38,744 INFO [ omero.gateway] (MainThread) closed connection (uuid=None)
06:30:14 2024-10-27 05:41:38,781 INFO [ omero.gateway] (MainThread) created connection (uuid=9461448c-0572-4f17-b9c8-0256d1c816f3)
06:30:14 2024-10-27 05:41:38,853 INFO [ omero.gateway] (MainThread) created connection (uuid=f890c0ba-5a7f-47d2-ba73-3413a1870cdc)
06:30:14 I<
06:30:14 ------------------------------ Captured log call -------------------------------
06:30:14 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=9461448c-0572-4f17-b9c8-0256d1c816f3)
06:30:14 INFO omero.gateway:__init__.py:2243 created connection (uuid=f890c0ba-5a7f-47d2-ba73-3413a1870cdc)
06:30:14 __________________________ TestUpgradeCheck.testReal ___________________________
06:30:14 self = <test.integration.test_util.TestUpgradeCheck object at 0x7eff363cec40>
06:30:14 def testReal(self):
06:30:14 uc = UpgradeCheck("test", version="test")
06:30:14 uc.run()
06:30:14 > assert uc.isUpgradeNeeded() is True
06:30:14 E assert False is True
06:30:14 E + where False = isUpgradeNeeded()
06:30:14 E + where isUpgradeNeeded = <omero.util.upgrade_check.UpgradeCheck object at 0x7efd5c0ebdf0>.isUpgradeNeeded
06:30:14 test/integration/test_util.py:35: AssertionError
06:30:14 ----------------------------- Captured stderr call -----------------------------
06:30:14 2024-10-27 06:30:13,855 ERROR [ omero.util.UpgradeCheck] (MainThread) HTTPConnectionPool(host='upgrade.openmicroscopy.org.uk', port=80): Max retries exceeded with url: /?version=test&os.name=Linux&os.arch=x86_64&os.version=Linux-5.14.0-427.40.1.el9_4.x86_64-x86_64-with-glibc2.34&python.version=3.9.18&python.compiler=GCC+11.4.1+20231218+%28Red+Hat+11.4.1-3%29&python.build=main&python.build=Aug+23+2024+00%3A00%3A00 (Caused by ConnectTimeoutError(<urllib3.connection.HTTPConnection object at 0x7efd5c0eb4f0>, 'Connection to upgrade.openmicroscopy.org.uk timed out. (connect timeout=6.0)'))
06:30:14 ------------------------------ Captured log call -------------------------------
06:30:14 ERROR omero.util.UpgradeCheck:upgrade_check.py:141 HTTPConnectionPool(host='upgrade.openmicroscopy.org.uk', port=80): Max retries exceeded with url: /?version=test&os.name=Linux&os.arch=x86_64&os.version=Linux-5.14.0-427.40.1.el9_4.x86_64-x86_64-with-glibc2.34&python.version=3.9.18&python.compiler=GCC+11.4.1+20231218+%28Red+Hat+11.4.1-3%29&python.build=main&python.build=Aug+23+2024+00%3A00%3A00 (Caused by ConnectTimeoutError(<urllib3.connection.HTTPConnection object at 0x7efd5c0eb4f0>, 'Connection to upgrade.openmicroscopy.org.uk timed out. (connect timeout=6.0)'))
06:30:14 =============================== warnings summary ===============================
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/Ice.py:14
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/Ice.py:14: DeprecationWarning: the imp module is deprecated in favour of importlib; see the module's documentation for alternative uses
06:30:14 import sys, string, imp, os, threading, warnings, datetime
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:241
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:241: RemovedInDjango50Warning: The default value of USE_TZ will change from False to True in Django 5.0. Set USE_TZ to False in your project settings if you want to keep the current default behavior.
06:30:14 warnings.warn(
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:289
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:289: RemovedInDjango51Warning: The STATICFILES_STORAGE setting is deprecated. Use STORAGES instead.
06:30:14 warnings.warn(STATICFILES_STORAGE_DEPRECATED_MSG, RemovedInDjango51Warning)
06:30:14 ../../../../.venv3/lib64/python3.9/site-packages/pipeline/__init__.py:1
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/pipeline/__init__.py:1: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html
06:30:14 from pkg_resources import DistributionNotFound, get_distribution
06:30:14 OmeroPy/test/integration/clitest/test_admin.py: 2 warnings
06:30:14 OmeroPy/test/integration/clitest/test_chgrp.py: 116 warnings
06:30:14 OmeroPy/test/integration/clitest/test_chown.py: 76 warnings
06:30:14 OmeroPy/test/integration/clitest/test_cleanse.py: 7 warnings
06:30:14 OmeroPy/test/integration/clitest/test_delete.py: 81 warnings
06:30:14 OmeroPy/test/integration/clitest/test_download.py: 91 warnings
06:30:14 OmeroPy/test/integration/clitest/test_duplicate.py: 18 warnings
06:30:14 OmeroPy/test/integration/clitest/test_fs.py: 26 warnings
06:30:14 OmeroPy/test/integration/clitest/test_group.py: 154 warnings
06:30:14 OmeroPy/test/integration/clitest/test_import.py: 189 warnings
06:30:14 OmeroPy/test/integration/clitest/test_import_bulk.py: 1 warning
06:30:14 OmeroPy/test/integration/clitest/test_ldap.py: 5 warnings
06:30:14 OmeroPy/test/integration/clitest/test_metadata.py: 10 warnings
06:30:14 OmeroPy/test/integration/clitest/test_obj.py: 56 warnings
06:30:14 OmeroPy/test/integration/clitest/test_pyramids.py: 10 warnings
06:30:14 OmeroPy/test/integration/clitest/test_script.py: 10 warnings
06:30:14 OmeroPy/test/integration/clitest/test_search.py: 16 warnings
06:30:14 OmeroPy/test/integration/clitest/test_sessions.py: 121 warnings
06:30:14 OmeroPy/test/integration/clitest/test_tag.py: 57 warnings
06:30:14 OmeroPy/test/integration/clitest/test_upload.py: 6 warnings
06:30:14 OmeroPy/test/integration/clitest/test_user.py: 183 warnings
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/plugins/sessions.py:176: DeprecationWarning: OMERO_SESSION_DIR is deprecated. Use OMERO_SESSIONDIR instead.
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/clitest/test_delete.py::TestDelete::testInputWithElisionDefault[1]
06:30:14 OmeroPy/test/integration/clitest/test_delete.py::TestDelete::testInputWithElisionDefault[2]
06:30:14 OmeroPy/test/integration/clitest/test_delete.py::TestDelete::testInputWithElisionDefault[3]
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/cli.py:2105: DeprecationWarning:
06:30:14 Using '--dry-run'. Future versions will switch to '--force'. Explicitly set the parameter for portability
06:30:14 warnings.warn("\nUsing '--dry-run'.\
06:30:14 OmeroPy/test/integration/clitest/test_import_bulk.py::TestImportBulk::testBulk
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_import_bulk.py:131: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-27/testBulk1') (type: LocalPath); converted to str implicitly
06:30:14 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir)
06:30:14 OmeroPy/test/integration/clitest/test_obj.py::TestObj::test_get_unit_and_value
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_model_PixelsI.py:37: DeprecationWarning: Pixels.relatedTo is deprecated
06:30:14 warnings.warn(item + " is deprecated", DeprecationWarning)
06:30:14 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testLogin[None-True]
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-27/testLogin_None_True_0') (type: LocalPath); converted to str implicitly
06:30:14 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir)
06:30:14 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testLogin[None-False]
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-27/testLogin_None_False_0') (type: LocalPath); converted to str implicitly
06:30:14 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir)
06:30:14 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testLogin[300-True]
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-27/testLogin_300_True_0') (type: LocalPath); converted to str implicitly
06:30:14 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir)
06:30:14 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testLogin[300-False]
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-27/testLogin_300_False_0') (type: LocalPath); converted to str implicitly
06:30:14 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir)
06:30:14 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testLoginAs[rw----]
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-27/testLoginAs_rw_____0') (type: LocalPath); converted to str implicitly
06:30:14 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir)
06:30:14 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testLoginAs[rwr---]
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-27/testLoginAs_rwr____0') (type: LocalPath); converted to str implicitly
06:30:14 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir)
06:30:14 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testLoginAs[rwra--]
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-27/testLoginAs_rwra___0') (type: LocalPath); converted to str implicitly
06:30:14 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir)
06:30:14 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testLoginAs[rwrw--]
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-27/testLoginAs_rwrw___0') (type: LocalPath); converted to str implicitly
06:30:14 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir)
06:30:14 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testLoginMultiGroup[True-True]
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-27/testLoginMultiGroup_True_True_0') (type: LocalPath); converted to str implicitly
06:30:14 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir)
06:30:14 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testLoginMultiGroup[True-False]
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-27/testLoginMultiGroup_True_False0') (type: LocalPath); converted to str implicitly
06:30:14 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir)
06:30:14 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testLoginMultiGroup[False-True]
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-27/testLoginMultiGroup_False_True0') (type: LocalPath); converted to str implicitly
06:30:14 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir)
06:30:14 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testLoginMultiGroup[False-False]
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-27/testLoginMultiGroup_False_Fals0') (type: LocalPath); converted to str implicitly
06:30:14 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir)
06:30:14 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testGroup
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-27/testGroup0') (type: LocalPath); converted to str implicitly
06:30:14 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir)
06:30:14 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testTimeout
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-27/testTimeout0') (type: LocalPath); converted to str implicitly
06:30:14 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir)
06:30:14 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testFile
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-27/testFile0') (type: LocalPath); converted to str implicitly
06:30:14 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir)
06:30:14 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testKey
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-27/testKey0') (type: LocalPath); converted to str implicitly
06:30:14 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir)
06:30:14 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testWho[user]
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-27/testWho_user_0') (type: LocalPath); converted to str implicitly
06:30:14 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir)
06:30:14 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testWho[root]
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-27/testWho_root_0') (type: LocalPath); converted to str implicitly
06:30:14 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir)
06:30:14 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::test_open
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-27/test_open0') (type: LocalPath); converted to str implicitly
06:30:14 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir)
06:30:14 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::test_open_with_id
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-27/test_open_with_id0') (type: LocalPath); converted to str implicitly
06:30:14 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir)
06:30:14 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::test_open_restricted_admin_no_sudo
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-27/test_open_restricted_admin_no_0') (type: LocalPath); converted to str implicitly
06:30:14 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir)
06:30:14 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::test_open_restricted_admin_sudo
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-27/test_open_restricted_admin_sud0') (type: LocalPath); converted to str implicitly
06:30:14 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir)
06:30:14 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::test_close
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-27/test_close0') (type: LocalPath); converted to str implicitly
06:30:14 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir)
06:30:14 OmeroPy/test/integration/fstest/test_rename.py::TestRename::test_dir
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/fstest/test_rename.py::TestRename::test_dir returned 'e533c0db-2f17-4202-9584-2fc7845605d0_3717/013c6bd8-6f93-411a-8f65-0eac805255f6', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`?
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/gatewaytest/test_annotation.py: 4 warnings
06:30:14 OmeroPy/test/integration/gatewaytest/test_chmod.py: 28 warnings
06:30:14 OmeroPy/test/integration/gatewaytest/test_connection.py: 10 warnings
06:30:14 OmeroPy/test/integration/gatewaytest/test_get_objects.py: 3 warnings
06:30:14 OmeroPy/test/integration/gatewaytest/test_image_wrapper.py: 3 warnings
06:30:14 OmeroPy/test/integration/gatewaytest/test_user.py: 1 warning
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py:4810: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead
06:30:14 logger.warn("%s on %s to <%s> %s(%r, %r)",
06:30:14 OmeroPy/test/integration/gatewaytest/test_annotation.py: 13 warnings
06:30:14 OmeroPy/test/integration/gatewaytest/test_chgrp.py: 4 warnings
06:30:14 OmeroPy/test/integration/gatewaytest/test_chmod.py: 3 warnings
06:30:14 OmeroPy/test/integration/gatewaytest/test_get_objects.py: 25 warnings
06:30:14 OmeroPy/test/integration/gatewaytest/test_missing_pyramid.py: 5 warnings
06:30:14 OmeroPy/test/integration/gatewaytest/test_services.py: 2 warnings
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py:3824: DeprecationWarning: tostring() is deprecated. Use tobytes() instead.
06:30:14 convertedPlane = byteSwappedPlane.tostring()
06:30:14 OmeroPy/test/integration/gatewaytest/test_delete.py::TestDelete::testDeleteObjectDirect
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py:4381: DeprecationWarning: Deprecated. Use deleteObject() or deleteObjects()
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/gatewaytest/test_fs.py::TestFileset::testGetArchivedFiles
06:30:14 OmeroPy/test/integration/gatewaytest/test_fs.py::TestFileset::testGetArchivedFiles
06:30:14 OmeroPy/test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testGetArchivedFiles
06:30:14 OmeroPy/test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testGetArchivedFiles
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py:10236: DeprecationWarning: Deprecated. Use getImportedImageFiles()
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/gatewaytest/test_get_objects.py::TestLeaderAndMemberOfGroup::testGroupSummaryAsOwnerDeprecated
06:30:14 OmeroPy/test/integration/gatewaytest/test_get_objects.py::TestLeaderAndMemberOfGroup::testGroupSummaryAsOwnerDeprecated
06:30:14 OmeroPy/test/integration/gatewaytest/test_get_objects.py::TestLeaderAndMemberOfGroup::testGroupSummaryAsMemberDeprecated
06:30:14 OmeroPy/test/integration/gatewaytest/test_get_objects.py::TestLeaderAndMemberOfGroup::testGroupSummaryAsMemberDeprecated
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py:3048: DeprecationWarning: Deprecated. Use ExperimenterGroupWrapper.groupSummary()
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/gatewaytest/test_ticket10618.py: 24 warnings
06:30:14 OmeroPy/test/integration/scriptstest/test_roi_handling_utils.py: 1 warning
06:30:14 OmeroPy/test/integration/scriptstest/test_script_utils.py: 150 warnings
06:30:14 OmeroPy/test/integration/test_exporter.py: 1 warning
06:30:14 OmeroPy/test/integration/test_ishare.py: 3 warnings
06:30:14 OmeroPy/test/integration/test_librarytest.py: 31 warnings
06:30:14 OmeroPy/test/integration/test_permissions.py: 2 warnings
06:30:14 OmeroPy/test/integration/test_render.py: 1 warning
06:30:14 OmeroPy/test/integration/test_rois.py: 2 warnings
06:30:14 OmeroPy/test/integration/test_scripts.py: 1 warning
06:30:14 OmeroPy/test/integration/test_thumbnailPerms.py: 55 warnings
06:30:14 OmeroPy/test/integration/test_tickets1000.py: 1 warning
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/script_utils.py:1093: DeprecationWarning: tostring() is deprecated. Use tobytes() instead.
06:30:14 converted_plane = byte_swapped_plane.tostring()
06:30:14 OmeroPy/test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[None-Screen2Plates]
06:30:14 OmeroPy/test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[1-Screen2Plates]
06:30:14 OmeroPy/test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[10-Screen2Plates]
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/populate_metadata.py:905: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead
06:30:14 log.warn("PlateColumn is unimplemented")
06:30:14 OmeroPy/test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[None-Dataset2Images1Missing]
06:30:14 OmeroPy/test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[1-Dataset2Images1Missing]
06:30:14 OmeroPy/test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[10-Dataset2Images1Missing]
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/populate_metadata.py:955: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead
06:30:14 log.warn(
06:30:14 OmeroPy/test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[None-Dataset2Images1Missing]
06:30:14 OmeroPy/test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[1-Dataset2Images1Missing]
06:30:14 OmeroPy/test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[10-Dataset2Images1Missing]
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/populate_metadata.py:1389: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead
06:30:14 log.warn("Invalid Id:%d found in row %s", row[n], row)
06:30:14 OmeroPy/test/integration/scriptsharness/test_harness.py::TestScriptsViaOmeroCli::testDefinition
06:30:14 OmeroPy/test/integration/scriptsharness/test_harness.py::TestScriptsViaOmeroCli::testDefinition
06:30:14 OmeroPy/test/integration/scriptsharness/test_harness.py::TestScriptsViaOmeroCli::testSimpleScript
06:30:14 OmeroPy/test/integration/scriptsharness/test_harness.py::TestScriptsViaOmeroCli::testSimpleScript
06:30:14 <string>:77: DeprecationWarning: This plugin is deprecated as of OMERO 5.5.0. Use the upload CLI plugin available from https://pypi.org/project/omero-upload/ instead.
06:30:14 OmeroPy/test/integration/scriptstest/test_coverage.py::TestCoverage::testUploadAndScript
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/scriptstest/test_coverage.py::TestCoverage::testUploadAndScript returned 4959, which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`?
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_numpy_save_as_image[True-tiff]
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/unraisableexception.py:85: PytestUnraisableExceptionWarning: Exception ignored in: <function _TemporaryFileCloser.__del__ at 0x7eff427a1a60>
06:30:14 Traceback (most recent call last):
06:30:14 File "/usr/lib64/python3.9/tempfile.py", line 461, in __del__
06:30:14 self.close()
06:30:14 File "/usr/lib64/python3.9/tempfile.py", line 457, in close
06:30:14 unlink(self.name)
06:30:14 FileNotFoundError: [Errno 2] No such file or directory: '/tmp/tmpafo5lriq.tiff'
06:30:14 warnings.warn(pytest.PytestUnraisableExceptionWarning(msg))
06:30:14 OmeroPy/test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_numpy_save_as_image[True-foo]
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/unraisableexception.py:85: PytestUnraisableExceptionWarning: Exception ignored in: <function _TemporaryFileCloser.__del__ at 0x7eff427a1a60>
06:30:14 Traceback (most recent call last):
06:30:14 File "/usr/lib64/python3.9/tempfile.py", line 461, in __del__
06:30:14 self.close()
06:30:14 File "/usr/lib64/python3.9/tempfile.py", line 457, in close
06:30:14 unlink(self.name)
06:30:14 FileNotFoundError: [Errno 2] No such file or directory: '/tmp/tmpt_rw0l9p.foo'
06:30:14 warnings.warn(pytest.PytestUnraisableExceptionWarning(msg))
06:30:14 OmeroPy/test/integration/scriptstest/test_script_utils.py: 200 warnings
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/script_utils.py:1131: DeprecationWarning: tostring() is deprecated. Use tobytes() instead.
06:30:14 converted_row = row.tostring()
06:30:14 OmeroPy/test/integration/tablestest/test_backwards_compatibility.py: 12 warnings
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/tablestest/test_backwards_compatibility.py:84: DeprecationWarning: The binary mode of fromstring is deprecated, as it behaves surprisingly on unicode inputs. Use frombuffer instead
06:30:14 return numpy.fromstring(x, count=len(x), dtype=tables.UInt8Atom())
06:30:14 OmeroPy/test/integration/tablestest/test_service.py::TestTables::testBlankTable
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/tablestest/test_service.py::TestTables::testBlankTable returned object #0 (::omero::model::OriginalFile)
06:30:14 {
06:30:14 _id = object #1 (::omero::RLong)
06:30:14 {
06:30:14 _val = 5015
06:30:14 }
06:30:14 _details = object #2 (::omero::model::Details)
06:30:14 {
06:30:14 _owner = object #3 (::omero::model::Experimenter)
06:30:14 {
06:30:14 _id = object #4 (::omero::RLong)
06:30:14 {
06:30:14 _val = 3847
06:30:14 }
06:30:14 _details = object #5 (::omero::model::Details)
06:30:14 {
06:30:14 _owner = <nil>
06:30:14 _group = <nil>
06:30:14 _creationEvent = <nil>
06:30:14 _updateEvent = <nil>
06:30:14 _permissions = object #6 (::omero::model::Permissions)
06:30:14 {
06:30:14 _restrictions =
06:30:14 {
06:30:14 [0] = False
06:30:14 [1] = True
06:30:14 [2] = True
06:30:14 [3] = True
06:30:14 [4] = True
06:30:14 [5] = True
06:30:14 }
06:30:14 _extendedRestrictions =
06:30:14 {
06:30:14 }
06:30:14 _perm1 = -120
06:30:14 }
06:30:14 _externalInfo = <nil>
06:30:14 _call =
06:30:14 {
06:30:14 key = omero.client.uuid
06:30:14 value = 7fd194c4-d00f-46b1-a93e-ef2418803d22
06:30:14 key = omero.session.uuid
06:30:14 value = 1f052867-010f-4b66-bb7e-0fcc7b3109d4
06:30:14 }
06:30:14 _event = object #7 (::omero::sys::EventContext)
06:30:14 {
06:30:14 shareId = -1
06:30:14 sessionId = 8772
06:30:14 sessionUuid = *********
06:30:14 userId = 3847
06:30:14 userName = ccbb6ec2-dd34-40b6-9b9c-939868481d12
06:30:14 sudoerId = <nil>
06:30:14 sudoerName = <nil>
06:30:14 groupId = 2824
06:30:14 groupName = b5a76996-4e86-42bf-b186-5acede82ed03
06:30:14 isAdmin = False
06:30:14 adminPrivileges =
06:30:14 {
06:30:14 }
06:30:14 eventId = 80645
06:30:14 eventType = User
06:30:14 memberOfGroups =
06:30:14 {
06:30:14 [0] = 2824
06:30:14 [1] = 1
06:30:14 }
06:30:14 leaderOfGroups =
06:30:14 {
06:30:14 }
06:30:14 groupPermissions = object #8 (::omero::model::Permissions)
06:30:14 {
06:30:14 _restrictions =
06:30:14 {
06:30:14 }
06:30:14 _extendedRestrictions =
06:30:14 {
06:30:14 }
06:30:14 _perm1 = -120
06:30:14 }
06:30:14 }
06:30:14 }
06:30:14 _loaded = True
06:30:14 _version = object #9 (::omero::RInt)
06:30:14 {
06:30:14 _val = 0
06:30:14 }
06:30:14 _groupExperimenterMapSeq =
06:30:14 {
06:30:14 }
06:30:14 _groupExperimenterMapLoaded = False
06:30:14 _omeName = object #10 (::omero::RString)
06:30:14 {
06:30:14 _val = ccbb6ec2-dd34-40b6-9b9c-939868481d12
06:30:14 }
06:30:14 _firstName = object #11 (::omero::RString)
06:30:14 {
06:30:14 _val = ccbb6ec2-dd34-40b6-9b9c-939868481d12
06:30:14 }
06:30:14 _middleName = <nil>
06:30:14 _lastName = object #12 (::omero::RString)
06:30:14 {
06:30:14 _val = ccbb6ec2-dd34-40b6-9b9c-939868481d12
06:30:14 }
06:30:14 _institution = <nil>
06:30:14 _ldap = object #13 (::omero::RBool)
06:30:14 {
06:30:14 _val = False
06:30:14 }
06:30:14 _email = object #14 (::omero::RString)
06:30:14 {
06:30:14 _val =
06:30:14 }
06:30:14 _config =
06:30:14 {
06:30:14 }
06:30:14 _annotationLinksSeq =
06:30:14 {
06:30:14 }
06:30:14 _annotationLinksLoaded = False
06:30:14 _annotationLinksCountPerOwner =
06:30:14 {
06:30:14 }
06:30:14 }
06:30:14 _group = object #15 (::omero::model::ExperimenterGroup)
06:30:14 {
06:30:14 _id = object #16 (::omero::RLong)
06:30:14 {
06:30:14 _val = 2824
06:30:14 }
06:30:14 _details = object #17 (::omero::model::Details)
06:30:14 {
06:30:14 _owner = <nil>
06:30:14 _group = <nil>
06:30:14 _creationEvent = <nil>
06:30:14 _updateEvent = <nil>
06:30:14 _permissions = object #18 (::omero::model::Permissions)
06:30:14 {
06:30:14 _restrictions =
06:30:14 {
06:30:14 [0] = False
06:30:14 [1] = True
06:30:14 [2] = True
06:30:14 [3] = True
06:30:14 [4] = True
06:30:14 [5] = True
06:30:14 }
06:30:14 _extendedRestrictions =
06:30:14 {
06:30:14 }
06:30:14 _perm1 = -120
06:30:14 }
06:30:14 _externalInfo = <nil>
06:30:14 _call =
06:30:14 {
06:30:14 key = omero.client.uuid
06:30:14 value = 7fd194c4-d00f-46b1-a93e-ef2418803d22
06:30:14 key = omero.session.uuid
06:30:14 value = 1f052867-010f-4b66-bb7e-0fcc7b3109d4
06:30:14 }
06:30:14 _event = object #19 (::omero::sys::EventContext)
06:30:14 {
06:30:14 shareId = -1
06:30:14 sessionId = 8772
06:30:14 sessionUuid = *********
06:30:14 userId = 3847
06:30:14 userName = ccbb6ec2-dd34-40b6-9b9c-939868481d12
06:30:14 sudoerId = <nil>
06:30:14 sudoerName = <nil>
06:30:14 groupId = 2824
06:30:14 groupName = b5a76996-4e86-42bf-b186-5acede82ed03
06:30:14 isAdmin = False
06:30:14 adminPrivileges =
06:30:14 {
06:30:14 }
06:30:14 eventId = 80645
06:30:14 eventType = User
06:30:14 memberOfGroups =
06:30:14 {
06:30:14 [0] = 2824
06:30:14 [1] = 1
06:30:14 }
06:30:14 leaderOfGroups =
06:30:14 {
06:30:14 }
06:30:14 groupPermissions = object #20 (::omero::model::Permissions)
06:30:14 {
06:30:14 _restrictions =
06:30:14 {
06:30:14 }
06:30:14 _extendedRestrictions =
06:30:14 {
06:30:14 }
06:30:14 _perm1 = -120
06:30:14 }
06:30:14 }
06:30:14 }
06:30:14 _loaded = True
06:30:14 _version = <object #9>
06:30:14 _name = object #21 (::omero::RString)
06:30:14 {
06:30:14 _val = b5a76996-4e86-42bf-b186-5acede82ed03
06:30:14 }
06:30:14 _ldap = <object #13>
06:30:14 _groupExperimenterMapSeq =
06:30:14 {
06:30:14 }
06:30:14 _groupExperimenterMapLoaded = False
06:30:14 _config =
06:30:14 {
06:30:14 }
06:30:14 _annotationLinksSeq =
06:30:14 {
06:30:14 }
06:30:14 _annotationLinksLoaded = False
06:30:14 _annotationLinksCountPerOwner =
06:30:14 {
06:30:14 }
06:30:14 _description = <nil>
06:30:14 }
06:30:14 _creationEvent = object #22 (::omero::model::Event)
06:30:14 {
06:30:14 _id = object #23 (::omero::RLong)
06:30:14 {
06:30:14 _val = 80645
06:30:14 }
06:30:14 _details = object #24 (::omero::model::Details)
06:30:14 {
06:30:14 _owner = <nil>
06:30:14 _group = <nil>
06:30:14 _creationEvent = <nil>
06:30:14 _updateEvent = <nil>
06:30:14 _permissions = object #25 (::omero::model::Permissions)
06:30:14 {
06:30:14 _restrictions =
06:30:14 {
06:30:14 [0] = False
06:30:14 [1] = True
06:30:14 [2] = True
06:30:14 [3] = True
06:30:14 [4] = True
06:30:14 [5] = True
06:30:14 }
06:30:14 _extendedRestrictions =
06:30:14 {
06:30:14 }
06:30:14 _perm1 = -120
06:30:14 }
06:30:14 _externalInfo = <nil>
06:30:14 _call =
06:30:14 {
06:30:14 key = omero.client.uuid
06:30:14 value = 7fd194c4-d00f-46b1-a93e-ef2418803d22
06:30:14 key = omero.session.uuid
06:30:14 value = 1f052867-010f-4b66-bb7e-0fcc7b3109d4
06:30:14 }
06:30:14 _event = object #26 (::omero::sys::EventContext)
06:30:14 {
06:30:14 shareId = -1
06:30:14 sessionId = 8772
06:30:14 sessionUuid = *********
06:30:14 userId = 3847
06:30:14 userName = ccbb6ec2-dd34-40b6-9b9c-939868481d12
06:30:14 sudoerId = <nil>
06:30:14 sudoerName = <nil>
06:30:14 groupId = 2824
06:30:14 groupName = b5a76996-4e86-42bf-b186-5acede82ed03
06:30:14 isAdmin = False
06:30:14 adminPrivileges =
06:30:14 {
06:30:14 }
06:30:14 eventId = 80645
06:30:14 eventType = User
06:30:14 memberOfGroups =
06:30:14 {
06:30:14 [0] = 2824
06:30:14 [1] = 1
06:30:14 }
06:30:14 leaderOfGroups =
06:30:14 {
06:30:14 }
06:30:14 groupPermissions = object #27 (::omero::model::Permissions)
06:30:14 {
06:30:14 _restrictions =
06:30:14 {
06:30:14 }
06:30:14 _extendedRestrictions =
06:30:14 {
06:30:14 }
06:30:14 _perm1 = -120
06:30:14 }
06:30:14 }
06:30:14 }
06:30:14 _loaded = True
06:30:14 _status = <nil>
06:30:14 _time = object #28 (::omero::RTime)
06:30:14 {
06:30:14 _val = 1730008603440
06:30:14 }
06:30:14 _experimenter = <object #3>
06:30:14 _experimenterGroup = <object #15>
06:30:14 _type = object #29 (::omero::model::EventType)
06:30:14 {
06:30:14 _id = object #30 (::omero::RLong)
06:30:14 {
06:30:14 _val = 4
06:30:14 }
06:30:14 _details = object #31 (::omero::model::Details)
06:30:14 {
06:30:14 _owner = <nil>
06:30:14 _group = <nil>
06:30:14 _creationEvent = <nil>
06:30:14 _updateEvent = <nil>
06:30:14 _permissions = object #32 (::omero::model::Permissions)
06:30:14 {
06:30:14 _restrictions =
06:30:14 {
06:30:14 [0] = False
06:30:14 [1] = True
06:30:14 [2] = True
06:30:14 [3] = False
06:30:14 [4] = True
06:30:14 [5] = True
06:30:14 }
06:30:14 _extendedRestrictions =
06:30:14 {
06:30:14 }
06:30:14 _perm1 = -120
06:30:14 }
06:30:14 _externalInfo = <nil>
06:30:14 _call =
06:30:14 {
06:30:14 key = omero.client.uuid
06:30:14 value = 7fd194c4-d00f-46b1-a93e-ef2418803d22
06:30:14 key = omero.session.uuid
06:30:14 value = 1f052867-010f-4b66-bb7e-0fcc7b3109d4
06:30:14 }
06:30:14 _event = object #33 (::omero::sys::EventContext)
06:30:14 {
06:30:14 shareId = -1
06:30:14 sessionId = 8772
06:30:14 sessionUuid = *********
06:30:14 userId = 3847
06:30:14 userName = ccbb6ec2-dd34-40b6-9b9c-939868481d12
06:30:14 sudoerId = <nil>
06:30:14 sudoerName = <nil>
06:30:14 groupId = 2824
06:30:14 groupName = b5a76996-4e86-42bf-b186-5acede82ed03
06:30:14 isAdmin = False
06:30:14 adminPrivileges =
06:30:14 {
06:30:14 }
06:30:14 eventId = 80645
06:30:14 eventType = User
06:30:14 memberOfGroups =
06:30:14 {
06:30:14 [0] = 2824
06:30:14 [1] = 1
06:30:14 }
06:30:14 leaderOfGroups =
06:30:14 {
06:30:14 }
06:30:14 groupPermissions = object #34 (::omero::model::Permissions)
06:30:14 {
06:30:14 _restrictions =
06:30:14 {
06:30:14 }
06:30:14 _extendedRestrictions =
06:30:14 {
06:30:14 }
06:30:14 _perm1 = -120
06:30:14 }
06:30:14 }
06:30:14 }
06:30:14 _loaded = True
06:30:14 _value = object #35 (::omero::RString)
06:30:14 {
06:30:14 _val = User
06:30:14 }
06:30:14 }
06:30:14 _containingEvent = <nil>
06:30:14 _logsSeq =
06:30:14 {
06:30:14 }
06:30:14 _logsLoaded = True
06:30:14 _session = object #36 (::omero::model::Session)
06:30:14 {
06:30:14 _id = object #37 (::omero::RLong)
06:30:14 {
06:30:14 _val = 8772
06:30:14 }
06:30:14 _details = object #38 (::omero::model::Details)
06:30:14 {
06:30:14 _owner = <nil>
06:30:14 _group = <nil>
06:30:14 _creationEvent = <nil>
06:30:14 _updateEvent = <nil>
06:30:14 _permissions = object #39 (::omero::model::Permissions)
06:30:14 {
06:30:14 _restrictions =
06:30:14 {
06:30:14 [0] = False
06:30:14 [1] = True
06:30:14 [2] = True
06:30:14 [3] = False
06:30:14 [4] = True
06:30:14 [5] = True
06:30:14 }
06:30:14 _extendedRestrictions =
06:30:14 {
06:30:14 }
06:30:14 _perm1 = -120
06:30:14 }
06:30:14 _externalInfo = <nil>
06:30:14 _call =
06:30:14 {
06:30:14 key = omero.client.uuid
06:30:14 value = 7fd194c4-d00f-46b1-a93e-ef2418803d22
06:30:14 key = omero.session.uuid
06:30:14 value = 1f052867-010f-4b66-bb7e-0fcc7b3109d4
06:30:14 }
06:30:14 _event = object #40 (::omero::sys::EventContext)
06:30:14 {
06:30:14 shareId = -1
06:30:14 sessionId = 8772
06:30:14 sessionUuid = *********
06:30:14 userId = 3847
06:30:14 userName = ccbb6ec2-dd34-40b6-9b9c-939868481d12
06:30:14 sudoerId = <nil>
06:30:14 sudoerName = <nil>
06:30:14 groupId = 2824
06:30:14 groupName = b5a76996-4e86-42bf-b186-5acede82ed03
06:30:14 isAdmin = False
06:30:14 adminPrivileges =
06:30:14 {
06:30:14 }
06:30:14 eventId = 80645
06:30:14 eventType = User
06:30:14 memberOfGroups =
06:30:14 {
06:30:14 [0] = 2824
06:30:14 [1] = 1
06:30:14 }
06:30:14 leaderOfGroups =
06:30:14 {
06:30:14 }
06:30:14 groupPermissions = object #41 (::omero::model::Permissions)
06:30:14 {
06:30:14 _restrictions =
06:30:14 {
06:30:14 }
06:30:14 _extendedRestrictions =
06:30:14 {
06:30:14 }
06:30:14 _perm1 = -120
06:30:14 }
06:30:14 }
06:30:14 }
06:30:14 _loaded = True
06:30:14 _version = <object #9>
06:30:14 _node = object #42 (::omero::model::Node)
06:30:14 {
06:30:14 _id = object #43 (::omero::RLong)
06:30:14 {
06:30:14 _val = 1
06:30:14 }
06:30:14 _details = <nil>
06:30:14 _loaded = False
06:30:14 _version = <nil>
06:30:14 _sessionsSeq =
06:30:14 {
06:30:14 }
06:30:14 _sessionsLoaded = False
06:30:14 _uuid = <nil>
06:30:14 _conn = <nil>
06:30:14 _up = <nil>
06:30:14 _down = <nil>
06:30:14 _scale = <nil>
06:30:14 _annotationLinksSeq =
06:30:14 {
06:30:14 }
06:30:14 _annotationLinksLoaded = False
06:30:14 _annotationLinksCountPerOwner =
06:30:14 {
06:30:14 }
06:30:14 }
06:30:14 _uuid = object #44 (::omero::RString)
06:30:14 {
06:30:14 _val = ********
06:30:14 }
06:30:14 _owner = <object #3>
06:30:14 _sudoer = <nil>
06:30:14 _timeToIdle = object #45 (::omero::RLong)
06:30:14 {
06:30:14 _val = 600000
06:30:14 }
06:30:14 _timeToLive = object #46 (::omero::RLong)
06:30:14 {
06:30:14 _val = 0
06:30:14 }
06:30:14 _started = object #47 (::omero::RTime)
06:30:14 {
06:30:14 _val = 1730008603404
06:30:14 }
06:30:14 _closed = <nil>
06:30:14 _message = object #48 (::omero::RString)
06:30:14 {
06:30:14 _val = Initial message.
06:30:14 }
06:30:14 _defaultEventType = object #49 (::omero::RString)
06:30:14 {
06:30:14 _val = User
06:30:14 }
06:30:14 _userAgent = object #50 (::omero::RString)
06:30:14 {
06:30:14 _val = OMERO.py.test
06:30:14 }
06:30:14 _userIP = <nil>
06:30:14 _eventsSeq =
06:30:14 {
06:30:14 }
06:30:14 _eventsLoaded = False
06:30:14 _annotationLinksSeq =
06:30:14 {
06:30:14 }
06:30:14 _annotationLinksLoaded = True
06:30:14 _annotationLinksCountPerOwner =
06:30:14 {
06:30:14 }
06:30:14 }
06:30:14 }
06:30:14 _updateEvent = <object #22>
06:30:14 _permissions = object #51 (::omero::model::Permissions)
06:30:14 {
06:30:14 _restrictions =
06:30:14 {
06:30:14 [0] = False
06:30:14 [1] = False
06:30:14 [2] = False
06:30:14 [3] = False
06:30:14 [4] = False
06:30:14 [5] = True
06:30:14 }
06:30:14 _extendedRestrictions =
06:30:14 {
06:30:14 }
06:30:14 _perm1 = -120
06:30:14 }
06:30:14 _externalInfo = <nil>
06:30:14 _call =
06:30:14 {
06:30:14 key = omero.client.uuid
06:30:14 value = 7fd194c4-d00f-46b1-a93e-ef2418803d22
06:30:14 key = omero.session.uuid
06:30:14 value = 1f052867-010f-4b66-bb7e-0fcc7b3109d4
06:30:14 }
06:30:14 _event = object #52 (::omero::sys::EventContext)
06:30:14 {
06:30:14 shareId = -1
06:30:14 sessionId = 8772
06:30:14 sessionUuid = *********
06:30:14 userId = 3847
06:30:14 userName = ccbb6ec2-dd34-40b6-9b9c-939868481d12
06:30:14 sudoerId = <nil>
06:30:14 sudoerName = <nil>
06:30:14 groupId = 2824
06:30:14 groupName = b5a76996-4e86-42bf-b186-5acede82ed03
06:30:14 isAdmin = False
06:30:14 adminPrivileges =
06:30:14 {
06:30:14 }
06:30:14 eventId = 80645
06:30:14 eventType = User
06:30:14 memberOfGroups =
06:30:14 {
06:30:14 [0] = 2824
06:30:14 [1] = 1
06:30:14 }
06:30:14 leaderOfGroups =
06:30:14 {
06:30:14 }
06:30:14 groupPermissions = object #53 (::omero::model::Permissions)
06:30:14 {
06:30:14 _restrictions =
06:30:14 {
06:30:14 }
06:30:14 _extendedRestrictions =
06:30:14 {
06:30:14 }
06:30:14 _perm1 = -120
06:30:14 }
06:30:14 }
06:30:14 }
06:30:14 _loaded = True
06:30:14 _version = <nil>
06:30:14 _pixelsFileMapsSeq =
06:30:14 {
06:30:14 }
06:30:14 _pixelsFileMapsLoaded = True
06:30:14 _pixelsFileMapsCountPerOwner =
06:30:14 {
06:30:14 }
06:30:14 _path = object #54 (::omero::RString)
06:30:14 {
06:30:14 _val = /test
06:30:14 }
06:30:14 _repo = <nil>
06:30:14 _size = <nil>
06:30:14 _atime = object #55 (::omero::RTime)
06:30:14 {
06:30:14 _val = 1730008603438
06:30:14 }
06:30:14 _mtime = object #56 (::omero::RTime)
06:30:14 {
06:30:14 _val = 1730008603438
06:30:14 }
06:30:14 _ctime = object #57 (::omero::RTime)
06:30:14 {
06:30:14 _val = 1730008603438
06:30:14 }
06:30:14 _hasher = <nil>
06:30:14 _hash = <nil>
06:30:14 _mimetype = object #58 (::omero::RString)
06:30:14 {
06:30:14 _val = OMERO.tables
06:30:14 }
06:30:14 _filesetEntriesSeq =
06:30:14 {
06:30:14 }
06:30:14 _filesetEntriesLoaded = True
06:30:14 _annotationLinksSeq =
06:30:14 {
06:30:14 }
06:30:14 _annotationLinksLoaded = True
06:30:14 _annotationLinksCountPerOwner =
06:30:14 {
06:30:14 }
06:30:14 _name = object #59 (::omero::RString)
06:30:14 {
06:30:14 _val = /test
06:30:14 }
06:30:14 }, which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`?
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/tablestest/test_service.py::TestTables::testMask
06:30:14 OmeroPy/test/integration/tablestest/test_service.py::TestTables::testMask
06:30:14 OmeroPy/test/integration/tablestest/test_service.py::TestTables::testAllColumnsSameTable
06:30:14 OmeroPy/test/integration/tablestest/test_service.py::TestTables::testAllColumnsSameTable
06:30:14 OmeroPy/test/integration/tablestest/test_service.py::TestTables::testAllColumnsSameTable
06:30:14 OmeroPy/test/integration/tablestest/test_service.py::TestTables::testAllColumnsSameTable
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/tablestest/test_service.py:54: DeprecationWarning: The binary mode of fromstring is deprecated, as it behaves surprisingly on unicode inputs. Use frombuffer instead
06:30:14 return numpy.fromstring(x, count=len(x), dtype=tables.UInt8Atom())
06:30:14 OmeroPy/test/integration/tablestest/test_tables.py::TestTableIntegrity::testAllColumnsAndMetadata
06:30:14 OmeroPy/test/integration/tablestest/test_tables.py::TestTableIntegrity::testAllColumnsAndMetadata
06:30:14 OmeroPy/test/integration/tablestest/test_tables.py::TestTableIntegrity::testAllColumnsAndMetadata
06:30:14 OmeroPy/test/integration/tablestest/test_tables.py::TestTableIntegrity::testAllColumnsAndMetadata
06:30:14 OmeroPy/test/integration/tablestest/test_tables.py::TestTableIntegrity::testAllColumnsAndMetadata
06:30:14 OmeroPy/test/integration/tablestest/test_tables.py::TestTableIntegrity::testAllColumnsAndMetadata
06:30:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/tablestest/test_tables.py:55: DeprecationWarning: The binary mode of fromstring is deprecated, as it behaves surprisingly on unicode inputs. Use frombuffer instead
06:30:14 return numpy.fromstring(x, count=len(x), dtype=tables.UInt8Atom())
06:30:14 OmeroPy/test/integration/test_isession.py::TestISession::testJoinSession_Helper
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_isession.py::TestISession::testJoinSession_Helper returned 'eb7c4d17-3596-4047-bc38-a9b1590c9b2e', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`?
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/test_isession.py::TestISession::testSessionWithIP[127.0.0.1]
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_model_SessionI.py:37: DeprecationWarning: Session.userIP is deprecated
06:30:14 warnings.warn(item + " is deprecated", DeprecationWarning)
06:30:14 OmeroPy/test/integration/test_ishare.py::TestIShare::test1201
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_ishare.py::TestIShare::test1201 returned (<omero.clients.BaseClient object at 0x7efef040e640>, 8987, 1730009182026), which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`?
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/test_ishare.py::TestIShare::test_OS_regular_user
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_ishare.py::TestIShare::test_OS_regular_user returned (object #0 (::omero::model::Image)
06:30:14 {
06:30:14 _id = object #1 (::omero::RLong)
06:30:14 {
06:30:14 _val = 6287
06:30:14 }
06:30:14 _details = <nil>
06:30:14 _loaded = False
06:30:14 _version = <nil>
06:30:14 _series = <nil>
06:30:14 _acquisitionDate = <nil>
06:30:14 _archived = <nil>
06:30:14 _partial = <nil>
06:30:14 _format = <nil>
06:30:14 _imagingEnvironment = <nil>
06:30:14 _objectiveSettings = <nil>
06:30:14 _instrument = <nil>
06:30:14 _stageLabel = <nil>
06:30:14 _experiment = <nil>
06:30:14 _pixelsSeq = {}
06:30:14 _pixelsLoaded = False
06:30:14 _wellSamplesSeq = {}
06:30:14 _wellSamplesLoaded = False
06:30:14 _roisSeq = {}
06:30:14 _roisLoaded = False
06:30:14 _datasetLinksSeq = {}
06:30:14 _datasetLinksLoaded = False
06:30:14 _datasetLinksCountPerOwner =
06:30:14 {
06:30:14 }
06:30:14 _folderLinksSeq = {}
06:30:14 _folderLinksLoaded = False
06:30:14 _folderLinksCountPerOwner =
06:30:14 {
06:30:14 }
06:30:14 _fileset = <nil>
06:30:14 _annotationLinksSeq = {}
06:30:14 _annotationLinksLoaded = False
06:30:14 _annotationLinksCountPerOwner =
06:30:14 {
06:30:14 }
06:30:14 _name = <nil>
06:30:14 _description = <nil>
06:30:14 }, 9022), which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`?
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/test_reporawfilestore.py::TestRepoRawFileStore::test_dir
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_reporawfilestore.py::TestRepoRawFileStore::test_dir returned '8d09a023-78d7-4406-ae6e-5c99e64d59fb_4195/2731321a-ed00-465c-b779-ebf85f33816d', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`?
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/test_repository.py::TestRepository::test_dir
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_repository.py::TestRepository::test_dir returned 'e1b36bca-6a6d-4eb4-9317-dcc4364e2827_4196/3144b41e-2224-494d-a55e-0a773ff2c25b', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`?
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/test_repository.py::TestFileExists::test_dir
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_repository.py::TestFileExists::test_dir returned '7913b03a-b6c4-43ca-a1ec-535e68f5fe51_4197/9e7e164e-369e-41f8-89d4-17bf274cb07e', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`?
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/test_repository.py::TestManagedRepositoryMultiUser::test_dir
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_repository.py::TestManagedRepositoryMultiUser::test_dir returned '6e72321e-c6c4-43f3-8897-450f34a5a3a9_4198/0aac8d47-b015-46cb-9671-9f67e13f8331', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`?
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/test_repository.py::TestPythonImporter::test_dir
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_repository.py::TestPythonImporter::test_dir returned '9da62fcf-dca6-4878-ae86-0de6661c8c3d_4210/0a46279c-1fab-49f6-ac88-ba8e71a58177', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`?
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/test_repository.py::TestRawAccess::test_dir
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_repository.py::TestRawAccess::test_dir returned '3076832c-dbde-48e3-99ea-38881ce64521_4215/54e47f98-c238-4685-a060-52c4349c7084', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`?
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/test_repository.py::TestDbSync::test_dir
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_repository.py::TestDbSync::test_dir returned '1bc0de61-de25-43e1-8017-a08a8a138f82_4216/c2e26ec2-d4fd-435c-9925-5a9c041c7bf1', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`?
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/test_repository.py::TestRecursiveDelete::test_dir
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_repository.py::TestRecursiveDelete::test_dir returned 'e8cd6406-5f8a-41bc-ab8d-c79a026343ff_4217/ae719fe3-fef2-47d5-b3e5-6ee1adef4132', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`?
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/test_repository.py::TestDeleteLog::test_dir
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_repository.py::TestDeleteLog::test_dir returned 'd8890826-ca23-4aa1-8572-9352e46e8145_4218/8ef254a4-d582-4ba2-9df9-05777ddc5b1c', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`?
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/test_repository.py::TestUserTemplate::test_dir
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_repository.py::TestUserTemplate::test_dir returned 'e03d4f51-28f6-467d-9b4d-3dd30bc41749_4219/656de312-e4fb-4aa2-bfd6-d12c798da629', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`?
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/test_repository.py::TestFilesetQueries::test_dir
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_repository.py::TestFilesetQueries::test_dir returned 'b3c1be23-23db-44a0-a371-b03f260cb223_4220/88dec7f6-4ad9-487e-9074-c82da1be126a', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`?
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/test_repository.py::TestOriginalMetadata::test_dir
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_repository.py::TestOriginalMetadata::test_dir returned '7e7c530d-6cf0-4c66-a9f6-6713b739a2c4_4221/7531c4dc-914c-46da-984a-e11eab38ebed', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`?
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/test_repository.py::TestDeletePerformance::test_dir
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_repository.py::TestDeletePerformance::test_dir returned '6facfb78-7d1a-47d0-968a-1960598f018b_4223/894a3b81-47ae-45ad-ab32-5fa4dca409b3', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`?
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/test_scripts.py::TestScripts::testBasicUsage
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_scripts.py::TestScripts::testBasicUsage returned 9ad2ba9b-91f2-4ce5-897c-0a7f22d79209/9c609d1b-e357-4ec4-b9d4-7c744829cca0omero.api.IScript -t -e 1.1:tcp -h 172.18.0.10 -p 45689 -t 60000, which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`?
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/test_scripts.py::TestScripts::testUpload2562
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_scripts.py::TestScripts::testUpload2562 returned (c8d05287-9fd3-43cb-8ce9-24e2fe80fe1e/d49512f6-c0e7-4c99-955d-637075431e45omero.api.IScript -t -e 1.1:tcp -h 172.18.0.10 -p 45689 -t 60000, object #0 (::omero::model::OriginalFile)
06:30:14 {
06:30:14 _id = object #1 (::omero::RLong)
06:30:14 {
06:30:14 _val = 5703
06:30:14 }
06:30:14 _details = object #2 (::omero::model::Details)
06:30:14 {
06:30:14 _owner = object #3 (::omero::model::Experimenter)
06:30:14 {
06:30:14 _id = object #4 (::omero::RLong)
06:30:14 {
06:30:14 _val = 0
06:30:14 }
06:30:14 _details = <nil>
06:30:14 _loaded = False
06:30:14 _version = <nil>
06:30:14 _groupExperimenterMapSeq =
06:30:14 {
06:30:14 }
06:30:14 _groupExperimenterMapLoaded = False
06:30:14 _omeName = <nil>
06:30:14 _firstName = <nil>
06:30:14 _middleName = <nil>
06:30:14 _lastName = <nil>
06:30:14 _institution = <nil>
06:30:14 _ldap = <nil>
06:30:14 _email = <nil>
06:30:14 _config =
06:30:14 {
06:30:14 }
06:30:14 _annotationLinksSeq =
06:30:14 {
06:30:14 }
06:30:14 _annotationLinksLoaded = False
06:30:14 _annotationLinksCountPerOwner =
06:30:14 {
06:30:14 }
06:30:14 }
06:30:14 _group = object #5 (::omero::model::ExperimenterGroup)
06:30:14 {
06:30:14 _id = object #6 (::omero::RLong)
06:30:14 {
06:30:14 _val = 1
06:30:14 }
06:30:14 _details = object #7 (::omero::model::Details)
06:30:14 {
06:30:14 _owner = <nil>
06:30:14 _group = <nil>
06:30:14 _creationEvent = <nil>
06:30:14 _updateEvent = <nil>
06:30:14 _permissions = object #8 (::omero::model::Permissions)
06:30:14 {
06:30:14 _restrictions =
06:30:14 {
06:30:14 [0] = False
06:30:14 [1] = True
06:30:14 [2] = True
06:30:14 [3] = False
06:30:14 [4] = True
06:30:14 [5] = True
06:30:14 }
06:30:14 _extendedRestrictions =
06:30:14 {
06:30:14 }
06:30:14 _perm1 = -52
06:30:14 }
06:30:14 _externalInfo = <nil>
06:30:14 _call =
06:30:14 {
06:30:14 key = omero.client.uuid
06:30:14 value = 9c609d1b-e357-4ec4-b9d4-7c744829cca0
06:30:14 key = omero.session.uuid
06:30:14 value = 9ad2ba9b-91f2-4ce5-897c-0a7f22d79209
06:30:14 }
06:30:14 _event = object #9 (::omero::sys::EventContext)
06:30:14 {
06:30:14 shareId = -1
06:30:14 sessionId = 9290
06:30:14 sessionUuid = *********
06:30:14 userId = 4230
06:30:14 userName = 30157c45-b208-4392-9ad1-59ee177e6c95
06:30:14 sudoerId = <nil>
06:30:14 sudoerName = <nil>
06:30:14 groupId = 3148
06:30:14 groupName = c7302b04-1ddc-4e7e-8c92-d9c8dd334457
06:30:14 isAdmin = False
06:30:14 adminPrivileges =
06:30:14 {
06:30:14 }
06:30:14 eventId = -1
06:30:14 eventType = User
06:30:14 memberOfGroups =
06:30:14 {
06:30:14 [0] = 3148
06:30:14 [1] = 1
06:30:14 }
06:30:14 leaderOfGroups =
06:30:14 {
06:30:14 }
06:30:14 groupPermissions = object #10 (::omero::model::Permissions)
06:30:14 {
06:30:14 _restrictions =
06:30:14 {
06:30:14 }
06:30:14 _extendedRestrictions =
06:30:14 {
06:30:14 }
06:30:14 _perm1 = -120
06:30:14 }
06:30:14 }
06:30:14 }
06:30:14 _loaded = True
06:30:14 _version = object #11 (::omero::RInt)
06:30:14 {
06:30:14 _val = 0
06:30:14 }
06:30:14 _name = object #12 (::omero::RString)
06:30:14 {
06:30:14 _val = user
06:30:14 }
06:30:14 _ldap = object #13 (::omero::RBool)
06:30:14 {
06:30:14 _val = False
06:30:14 }
06:30:14 _groupExperimenterMapSeq =
06:30:14 {
06:30:14 }
06:30:14 _groupExperimenterMapLoaded = False
06:30:14 _config =
06:30:14 {
06:30:14 }
06:30:14 _annotationLinksSeq =
06:30:14 {
06:30:14 }
06:30:14 _annotationLinksLoaded = False
06:30:14 _annotationLinksCountPerOwner =
06:30:14 {
06:30:14 }
06:30:14 _description = <nil>
06:30:14 }
06:30:14 _creationEvent = object #14 (::omero::model::Event)
06:30:14 {
06:30:14 _id = object #15 (::omero::RLong)
06:30:14 {
06:30:14 _val = 99453
06:30:14 }
06:30:14 _details = <nil>
06:30:14 _loaded = False
06:30:14 _status = <nil>
06:30:14 _time = <nil>
06:30:14 _experimenter = <nil>
06:30:14 _experimenterGroup = <nil>
06:30:14 _type = <nil>
06:30:14 _containingEvent = <nil>
06:30:14 _logsSeq =
06:30:14 {
06:30:14 }
06:30:14 _logsLoaded = False
06:30:14 _session = <nil>
06:30:14 }
06:30:14 _updateEvent = <object #14>
06:30:14 _permissions = object #16 (::omero::model::Permissions)
06:30:14 {
06:30:14 _restrictions =
06:30:14 {
06:30:14 [0] = False
06:30:14 [1] = True
06:30:14 [2] = True
06:30:14 [3] = False
06:30:14 [4] = True
06:30:14 [5] = True
06:30:14 }
06:30:14 _extendedRestrictions =
06:30:14 {
06:30:14 }
06:30:14 _perm1 = -120
06:30:14 }
06:30:14 _externalInfo = <nil>
06:30:14 _call =
06:30:14 {
06:30:14 key = omero.client.uuid
06:30:14 value = 9c609d1b-e357-4ec4-b9d4-7c744829cca0
06:30:14 key = omero.session.uuid
06:30:14 value = 9ad2ba9b-91f2-4ce5-897c-0a7f22d79209
06:30:14 }
06:30:14 _event = object #17 (::omero::sys::EventContext)
06:30:14 {
06:30:14 shareId = -1
06:30:14 sessionId = 9290
06:30:14 sessionUuid = *********
06:30:14 userId = 4230
06:30:14 userName = 30157c45-b208-4392-9ad1-59ee177e6c95
06:30:14 sudoerId = <nil>
06:30:14 sudoerName = <nil>
06:30:14 groupId = 3148
06:30:14 groupName = c7302b04-1ddc-4e7e-8c92-d9c8dd334457
06:30:14 isAdmin = False
06:30:14 adminPrivileges =
06:30:14 {
06:30:14 }
06:30:14 eventId = -1
06:30:14 eventType = User
06:30:14 memberOfGroups =
06:30:14 {
06:30:14 [0] = 3148
06:30:14 [1] = 1
06:30:14 }
06:30:14 leaderOfGroups =
06:30:14 {
06:30:14 }
06:30:14 groupPermissions = object #18 (::omero::model::Permissions)
06:30:14 {
06:30:14 _restrictions =
06:30:14 {
06:30:14 }
06:30:14 _extendedRestrictions =
06:30:14 {
06:30:14 }
06:30:14 _perm1 = -120
06:30:14 }
06:30:14 }
06:30:14 }
06:30:14 _loaded = True
06:30:14 _version = <object #11>
06:30:14 _pixelsFileMapsSeq =
06:30:14 {
06:30:14 }
06:30:14 _pixelsFileMapsLoaded = False
06:30:14 _pixelsFileMapsCountPerOwner =
06:30:14 {
06:30:14 }
06:30:14 _path = object #19 (::omero::RString)
06:30:14 {
06:30:14 _val = /
06:30:14 }
06:30:14 _repo = object #20 (::omero::RString)
06:30:14 {
06:30:14 _val = ScriptRepo
06:30:14 }
06:30:14 _size = object #21 (::omero::RLong)
06:30:14 {
06:30:14 _val = 168
06:30:14 }
06:30:14 _atime = <nil>
06:30:14 _mtime = <nil>
06:30:14 _ctime = <nil>
06:30:14 _hasher = object #22 (::omero::model::ChecksumAlgorithm)
06:30:14 {
06:30:14 _id = object #23 (::omero::RLong)
06:30:14 {
06:30:14 _val = 6
06:30:14 }
06:30:14 _details = <nil>
06:30:14 _loaded = False
06:30:14 _value = <nil>
06:30:14 }
06:30:14 _hash = object #24 (::omero::RString)
06:30:14 {
06:30:14 _val = 6643ddc9dfa83a078ed659b670bd37d8052f2df1
06:30:14 }
06:30:14 _mimetype = object #25 (::omero::RString)
06:30:14 {
06:30:14 _val = text/x-python
06:30:14 }
06:30:14 _filesetEntriesSeq =
06:30:14 {
06:30:14 }
06:30:14 _filesetEntriesLoaded = True
06:30:14 _annotationLinksSeq =
06:30:14 {
06:30:14 }
06:30:14 _annotationLinksLoaded = False
06:30:14 _annotationLinksCountPerOwner =
06:30:14 {
06:30:14 }
06:30:14 _name = object #26 (::omero::RString)
06:30:14 {
06:30:14 _val = 0220b449-b4ed-471d-9785-b041fd2c7f4f.py
06:30:14 }
06:30:14 }), which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`?
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/test_scripts.py::TestScripts::testRunScript
06:30:14 OmeroPy/test/integration/test_scripts.py::TestScripts::testRunScript
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/decorators.py:82: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead
06:30:14 log.warn(
06:30:14 OmeroPy/test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testThumbs
06:30:14 OmeroPy/test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testThumbs
06:30:14 OmeroPy/test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testThumbs
06:30:14 OmeroPy/test/integration/test_tickets1000.py::TestTicket1000::test880
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/script_utils.py:1313: DeprecationWarning: This method is deprecated as of OMERO 5.3.0
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testThumbs
06:30:14 OmeroPy/test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testThumbs
06:30:14 OmeroPy/test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testThumbs
06:30:14 OmeroPy/test/integration/test_tickets1000.py::TestTicket1000::test880
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/script_utils.py:1074: DeprecationWarning: This method is deprecated as of OMERO 5.3.0. Use upload_plane instead
06:30:14 warnings.warn(
06:30:14 OmeroPy/test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testThumbs
06:30:14 OmeroPy/test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testThumbs
06:30:14 OmeroPy/test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testThumbs
06:30:14 OmeroPy/test/integration/test_tickets1000.py::TestTicket1000::test880
06:30:14 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/script_utils.py:1259: DeprecationWarning: This method is deprecated as of OMERO 5.3.0. Use reset_rendering_settings
06:30:14 warnings.warn(
06:30:14 -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
06:30:14 - generated xml file: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/target/reports/integration/junit-results.xml -
06:30:14 =========================== short test summary info ============================
06:30:14 FAILED test/integration/clitest/test_admin.py::TestAdmin::test_checkupgrade0 - omero.cli.NonZeroReturnCode: assert failed
06:30:14 FAILED test/integration/clitest/test_admin.py::TestAdmin::test_checkupgrade1 - AssertionError: assert 2 == 1
06:30:14 + where 2 = NonZeroReturnCode('assert failed').rv
06:30:14 + where NonZeroReturnCode('assert failed') = <ExceptionInfo NonZeroReturnCode('assert failed') tblen=4>.value
06:30:14 FAILED test/integration/clitest/test_admin.py::TestAdminRestrictedAdmin::test_checkupgrade0 - omero.cli.NonZeroReturnCode: assert failed
06:30:14 FAILED test/integration/clitest/test_admin.py::TestAdminRestrictedAdmin::test_checkupgrade1 - AssertionError: assert 2 == 1
06:30:14 + where 2 = NonZeroReturnCode('assert failed').rv
06:30:14 + where NonZeroReturnCode('assert failed') = <ExceptionInfo NonZeroReturnCode('assert failed') tblen=3>.value
06:30:14 FAILED test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetObjectsByMapAnnotations[Image] - Ice.ConnectionLostException: Ice.ConnectionLostException:
06:30:14 recv() returned zero
06:30:14 FAILED test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetObjectsByMapAnnotations[Dataset] - Ice.ConnectionLostException: Ice.ConnectionLostException:
06:30:14 recv() returned zero
06:30:14 FAILED test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetObjectsByMapAnnotations[Project] - Ice.ConnectionLostException: Ice.ConnectionLostException:
06:30:14 recv() returned zero
06:30:14 FAILED test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetObjectsByMapAnnotations[Screen] - Ice.ConnectionLostException: Ice.ConnectionLostException:
06:30:14 recv() returned zero
06:30:14 FAILED test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetObjectsByMapAnnotations[Plate] - Ice.ConnectionLostException: Ice.ConnectionLostException:
06:30:14 recv() returned zero
06:30:14 FAILED test/integration/gatewaytest/test_user.py::TestUser::testSaveAs - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 FAILED test/integration/test_util.py::TestUpgradeCheck::testReal - assert False is True
06:30:14 + where False = isUpgradeNeeded()
06:30:14 + where isUpgradeNeeded = <omero.util.upgrade_check.UpgradeCheck object at 0x7efd5c0ebdf0>.isUpgradeNeeded
06:30:14 ERROR test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testClose - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testTopLevelObjects - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_get_objects.py::TestFindObject::testFindExperimenter - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetAnnotations - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetImage - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetImageLoadPixels[True-True] - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetImageLoadPixels[True-False] - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetImageLoadPixels[False-True] - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetImageLoadPixels[False-False] - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_get_objects.py::TestGetObject::testTraversal - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_image.py::TestImage::testThumbnail - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_image.py::TestImage::testThumbnailSet - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_image.py::TestImage::testRenderingModels - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_image.py::TestImage::testSplitChannel - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_image.py::TestImage::testLinePlots - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_image.py::TestImage::testProjections - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_image.py::TestImage::testProperties - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_image.py::TestImage::testPixelSizeUnits - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_image.py::TestImage::testUnitsGetValue - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_image.py::TestImage::testChannelWavelengthUnits - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_image.py::TestImage::testExposureTimeUnits - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_image.py::TestImage::testShortname - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_image.py::TestImage::testImageDate - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_image.py::TestImage::testSimpleMarshal - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_image.py::TestImage::testExport - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_image.py::TestImage::testRenderJpegRegion - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_image.py::TestImage::testRenderJpegRegion_resolution - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_image.py::TestImage::testRenderJpegRegion_invalid_resolution - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_image.py::TestImage::testRenderBirdsEyeView - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_image.py::TestImage::testRenderBirdsEyeView_Size - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_pixels.py::TestPixels::testReuseRawPixelsStore - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_pixels.py::TestPixels::testPlaneInfo - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_pixels.py::TestPixels::testPixelsType - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_pixels.py::TestPixels::testGetTile - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_pixels.py::TestPixels::testGetPlane - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_pixels.py::TestPixels::testGetPlanesExceptionOnGetPlane - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_pixels.py::TestPixels::testGetPlanesExceptionOnClose - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_pixels.py::TestPixels::testGetPlanesExceptionOnBoth - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_pixels.py::TestPixels::testGetHistogram - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testDefault - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testCustomized - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testChannelWindows - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testFloatDefaultMinMax - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testEmissionWave - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testBatchCopy - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testGroupBasedPermissions - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testGetRdefs - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testResetDefaults - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testQuantizationSettings - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testQuantizationSettingsInvalid - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testQuantizationSettingsBulk - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testGetChannelsNoRE - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testSetActiveChannelsNoRE - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testSetActiveChannelsWithRE - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::test_set_active_channels_set_inactive[True] - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::test_set_active_channels_set_inactive[False] - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testUnregisterService - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testRegisterService - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testCloseRE - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_wrapper.py::TestWrapper::testAllObjectsWrapped - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_wrapper.py::TestWrapper::testDatasetWrapper - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 ERROR test/integration/gatewaytest/test_wrapper.py::TestWrapper::testDetailsWrapper - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out>
06:30:14 = 11 failed, 1943 passed, 9 skipped, 36 deselected, 1924 warnings, 62 errors in 15277.10s (4:14:37) =
06:30:16 !! 10/27/24 06:30:16.127 error: 257 communicators not destroyed during global destruction.
06:30:16 Result: 1
06:30:16
06:30:16 BUILD SUCCESSFUL
06:30:16 Total time: 254 minutes 45 seconds
06:30:16 + /home/omero/workspace/OMERO-test-integration/src/build.py -f components/tools/OmeroFS/build.xml integration -Dtestreports.dir=target/reports/integration
06:30:16 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
06:30:16 Buildfile: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroFS/build.xml
06:30:17 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroFS...
06:30:17
06:30:17 python-integration:
06:30:17 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroFS/target/reports/integration
06:30:18 ============================= test session starts ==============================
06:30:18 platform linux -- Python 3.9.18, pytest-8.3.3, pluggy-1.5.0 -- /home/omero/workspace/OMERO-test-integration/.venv3/bin/python3
06:30:18 cachedir: .pytest_cache
06:30:18 django: version: 4.2.16, settings: omeroweb.settings (from ini)
06:30:18 rootdir: /home/omero/workspace/OMERO-test-integration/src/components/tools
06:30:18 configfile: pytest.ini
06:30:18 plugins: xdist-3.6.1, mock-3.14.0, django-4.9.0
06:30:18 collecting ... collected 1 item
06:30:18 test/integration/test_dbclient.py::TestDropBoxClient::test1 PASSED [100%]
06:30:18 =============================== warnings summary ===============================
06:30:18 ../../../../.venv3/lib64/python3.9/site-packages/Ice.py:14
06:30:18 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/Ice.py:14: DeprecationWarning: the imp module is deprecated in favour of importlib; see the module's documentation for alternative uses
06:30:18 import sys, string, imp, os, threading, warnings, datetime
06:30:18 ../../../../.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:241
06:30:18 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:241: RemovedInDjango50Warning: The default value of USE_TZ will change from False to True in Django 5.0. Set USE_TZ to False in your project settings if you want to keep the current default behavior.
06:30:18 warnings.warn(
06:30:18 ../../../../.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:289
06:30:18 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:289: RemovedInDjango51Warning: The STATICFILES_STORAGE setting is deprecated. Use STORAGES instead.
06:30:18 warnings.warn(STATICFILES_STORAGE_DEPRECATED_MSG, RemovedInDjango51Warning)
06:30:18 ../../../../.venv3/lib64/python3.9/site-packages/pipeline/__init__.py:1
06:30:18 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/pipeline/__init__.py:1: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html
06:30:18 from pkg_resources import DistributionNotFound, get_distribution
06:30:18 -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
06:30:18 - generated xml file: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroFS/target/reports/integration/junit-results.xml -
06:30:18 ======================== 1 passed, 4 warnings in 0.15s =========================
06:30:19
06:30:19 BUILD SUCCESSFUL
06:30:19 Total time: 2 seconds
06:30:19 + /home/omero/workspace/OMERO-test-integration/src/build.py -f components/tools/OmeroWeb/build.xml integration -Dtestreports.dir=target/reports/integration
06:30:19 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
06:30:19 Buildfile: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb/build.xml
06:30:19 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb...
06:30:19 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb...
06:30:19
06:30:19 python-integration:
06:30:19 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb/target/reports/integration
06:30:20 ============================= test session starts ==============================
06:30:20 platform linux -- Python 3.9.18, pytest-8.3.3, pluggy-1.5.0 -- /home/omero/workspace/OMERO-test-integration/.venv3/bin/python3
06:30:20 cachedir: .pytest_cache
06:30:20 django: version: 4.2.16, settings: omeroweb.settings (from ini)
06:30:20 rootdir: /home/omero/workspace/OMERO-test-integration/src/components/tools
06:30:20 configfile: pytest.ini
06:30:20 plugins: xdist-3.6.1, mock-3.14.0, django-4.9.0
06:30:24 collecting ... collected 430 items
06:30:49 test/integration/test_annotate.py::TestMapAnnotations::test_annotate_map PASSED [ 0%]
06:31:13 test/integration/test_annotate.py::TestTagging::test_create_tag PASSED [ 0%]
06:31:25 test/integration/test_annotate.py::TestTagging::test_annotate_tag PASSED [ 0%]
06:31:49 test/integration/test_annotate.py::TestBatchAnnotate::test_batch_annotate_tag PASSED [ 0%]
06:32:13 test/integration/test_annotate.py::TestFileAnnotations::test_add_fileannotations_form PASSED [ 1%]
06:32:22 test/integration/test_annotate.py::TestFileAnnotations::test_batch_add_fileannotations[1] PASSED [ 1%]
06:32:32 test/integration/test_annotate.py::TestFileAnnotations::test_batch_add_fileannotations[2] PASSED [ 1%]
06:32:56 test/integration/test_api_containers.py::TestContainers::test_create_update_unsupported[method0-Plate] PASSED [ 1%]
06:33:04 test/integration/test_api_containers.py::TestContainers::test_create_update_unsupported[method0-Image] PASSED [ 2%]
06:33:13 test/integration/test_api_containers.py::TestContainers::test_create_update_unsupported[method0-Well] PASSED [ 2%]
06:33:22 test/integration/test_api_containers.py::TestContainers::test_create_update_unsupported[method0-Channel] PASSED [ 2%]
06:33:31 test/integration/test_api_containers.py::TestContainers::test_create_update_unsupported[method0-foo] PASSED [ 2%]
06:33:40 test/integration/test_api_containers.py::TestContainers::test_create_update_unsupported[method1-Plate] PASSED [ 3%]
06:33:48 test/integration/test_api_containers.py::TestContainers::test_create_update_unsupported[method1-Image] PASSED [ 3%]
06:33:57 test/integration/test_api_containers.py::TestContainers::test_create_update_unsupported[method1-Well] PASSED [ 3%]
06:34:06 test/integration/test_api_containers.py::TestContainers::test_create_update_unsupported[method1-Channel] PASSED [ 3%]
06:34:15 test/integration/test_api_containers.py::TestContainers::test_create_update_unsupported[method1-foo] PASSED [ 3%]
06:34:23 test/integration/test_api_containers.py::TestContainers::test_delete_unsupported[Plate] PASSED [ 4%]
06:34:32 test/integration/test_api_containers.py::TestContainers::test_delete_unsupported[Image] PASSED [ 4%]
06:34:41 test/integration/test_api_containers.py::TestContainers::test_delete_unsupported[Well] PASSED [ 4%]
06:34:42 test/integration/test_api_containers.py::TestContainers::test_container_crud[Project] PASSED [ 4%]
06:34:43 test/integration/test_api_containers.py::TestContainers::test_container_crud[Dataset] PASSED [ 5%]
06:34:43 test/integration/test_api_containers.py::TestContainers::test_container_crud[Screen] PASSED [ 5%]
06:34:55 test/integration/test_api_containers.py::TestContainers::test_datasets_plates[Dataset-True] PASSED [ 5%]
06:35:06 test/integration/test_api_containers.py::TestContainers::test_datasets_plates[Dataset-False] PASSED [ 5%]
06:35:17 test/integration/test_api_containers.py::TestContainers::test_datasets_plates[Plate-True] PASSED [ 6%]
06:35:28 test/integration/test_api_containers.py::TestContainers::test_datasets_plates[Plate-False] PASSED [ 6%]
06:35:37 test/integration/test_api_containers.py::TestContainers::test_screens PASSED [ 6%]
06:35:46 test/integration/test_api_containers.py::TestContainers::test_screen_plates_update PASSED [ 6%]
06:35:55 test/integration/test_api_containers.py::TestContainers::test_container_tags_update[dtype0] PASSED [ 6%]
06:36:04 test/integration/test_api_containers.py::TestContainers::test_container_tags_update[dtype1] PASSED [ 7%]
06:36:13 test/integration/test_api_containers.py::TestContainers::test_container_tags_update[dtype2] PASSED [ 7%]
06:36:23 test/integration/test_api_containers.py::TestContainers::test_spw_urls PASSED [ 7%]
06:36:32 test/integration/test_api_containers.py::TestContainers::test_spw_parent_urls PASSED [ 7%]
06:36:42 test/integration/test_api_containers.py::TestContainers::test_pdi_urls PASSED [ 8%]
06:36:53 test/integration/test_api_containers.py::TestContainers::test_pdi_parent_urls PASSED [ 8%]
06:37:08 test/integration/test_api_errors.py::TestErrors::test_save_post_no_id PASSED [ 8%]
06:37:08 test/integration/test_api_errors.py::TestErrors::test_save_put_id PASSED [ 8%]
06:37:08 test/integration/test_api_errors.py::TestErrors::test_marshal_type PASSED [ 9%]
06:37:08 test/integration/test_api_errors.py::TestErrors::test_invalid_parameter PASSED [ 9%]
06:37:08 test/integration/test_api_errors.py::TestErrors::test_marshal_validation PASSED [ 9%]
06:37:17 test/integration/test_api_errors.py::TestErrors::test_security_violation PASSED [ 9%]
06:37:26 test/integration/test_api_errors.py::TestErrors::test_validation_exception PASSED [ 10%]
06:37:29 test/integration/test_api_errors.py::TestErrors::test_project_validation PASSED [ 10%]
06:37:52 test/integration/test_api_experimenters_groups.py::TestExperimenters::test_create_update_unsupported[method0-Experimenter] PASSED [ 10%]
06:38:01 test/integration/test_api_experimenters_groups.py::TestExperimenters::test_create_update_unsupported[method0-ExperimenterGroup] PASSED [ 10%]
06:38:10 test/integration/test_api_experimenters_groups.py::TestExperimenters::test_create_update_unsupported[method1-Experimenter] PASSED [ 10%]
06:38:20 test/integration/test_api_experimenters_groups.py::TestExperimenters::test_create_update_unsupported[method1-ExperimenterGroup] PASSED [ 11%]
06:38:29 test/integration/test_api_experimenters_groups.py::TestExperimenters::test_delete_unsupported[Experimenter] PASSED [ 11%]
06:38:38 test/integration/test_api_experimenters_groups.py::TestExperimenters::test_delete_unsupported[ExperimenterGroup] PASSED [ 11%]
06:38:54 test/integration/test_api_experimenters_groups.py::TestExperimenters::test_experimenters_groups PASSED [ 11%]
06:39:03 test/integration/test_api_experimenters_groups.py::TestExperimenters::test_groups_experimenters PASSED [ 12%]
06:39:11 test/integration/test_api_experimenters_groups.py::TestExperimenters::test_filter_groups PASSED [ 12%]
06:39:20 test/integration/test_api_experimenters_groups.py::TestExperimenters::test_filter_experimenters PASSED [ 12%]
06:39:46 test/integration/test_api_images.py::TestImages::test_dataset_images PASSED [ 12%]
06:40:01 test/integration/test_api_login.py::TestLogin::test_versions PASSED [ 13%]
06:40:01 test/integration/test_api_login.py::TestLogin::test_base_url PASSED [ 13%]
06:40:01 test/integration/test_api_login.py::TestLogin::test_base_url_versions_404 PASSED [ 13%]
06:40:01 test/integration/test_api_login.py::TestLogin::test_login_get PASSED [ 13%]
06:40:01 test/integration/test_api_login.py::TestLogin::test_login_csrf PASSED [ 13%]
06:40:01 test/integration/test_api_login.py::TestLogin::test_login_errors[credentials0] PASSED [ 14%]
06:40:01 test/integration/test_api_login.py::TestLogin::test_login_errors[credentials1] PASSED [ 14%]
06:40:01 test/integration/test_api_login.py::TestLogin::test_login_errors[credentials2] PASSED [ 14%]
06:40:01 test/integration/test_api_login.py::TestLogin::test_login_errors[credentials3] PASSED [ 14%]
06:40:10 test/integration/test_api_login.py::TestLogin::test_login_example PASSED [ 15%]
06:40:25 test/integration/test_api_projects.py::TestProjects::test_marshal_projects_not_logged_in PASSED [ 15%]
06:40:34 test/integration/test_api_projects.py::TestProjects::test_marshal_projects_no_results PASSED [ 15%]
06:40:43 test/integration/test_api_projects.py::TestProjects::test_marshal_projects_user PASSED [ 15%]
06:40:55 test/integration/test_api_projects.py::TestProjects::test_marshal_projects_another_user PASSED [ 16%]
06:41:05 test/integration/test_api_projects.py::TestProjects::test_marshal_projects_another_group PASSED [ 16%]
06:41:14 test/integration/test_api_projects.py::TestProjects::test_marshal_projects_all_groups PASSED [ 16%]
06:41:26 test/integration/test_api_projects.py::TestProjects::test_marshal_projects_all_users PASSED [ 16%]
06:41:38 test/integration/test_api_projects.py::TestProjects::test_marshal_projects_pagination PASSED [ 16%]
06:41:49 test/integration/test_api_projects.py::TestProjects::test_marshal_projects_params PASSED [ 17%]
06:41:50 test/integration/test_api_projects.py::TestProjects::test_project_create_read PASSED [ 17%]
06:41:59 test/integration/test_api_projects.py::TestProjects::test_project_create_other_group PASSED [ 17%]
06:42:08 test/integration/test_api_projects.py::TestProjects::test_project_update PASSED [ 17%]
06:42:17 test/integration/test_api_projects.py::TestProjects::test_project_datasets_update[Project] PASSED [ 18%]
06:42:26 test/integration/test_api_projects.py::TestProjects::test_project_datasets_update[Dataset] PASSED [ 18%]
06:42:35 test/integration/test_api_projects.py::TestProjects::test_project_delete PASSED [ 18%]
06:43:00 test/integration/test_api_rois.py::TestContainers::test_image_rois PASSED [ 18%]
06:43:09 test/integration/test_api_rois.py::TestContainers::test_roi_delete PASSED [ 19%]
06:43:19 test/integration/test_api_rois.py::TestContainers::test_shapes PASSED [ 19%]
06:43:45 test/integration/test_api_wells.py::TestWells::test_plate_wells PASSED [ 19%]
06:43:57 test/integration/test_api_wells.py::TestWells::test_plate_index_wells PASSED [ 19%]
06:44:06 test/integration/test_api_wells.py::TestWells::test_well PASSED [ 20%]
06:44:28 test/integration/test_chgrp.py::TestChgrp::test_load_chgrp_groups[user] PASSED [ 20%]
06:44:28 test/integration/test_chgrp.py::TestChgrp::test_load_chgrp_groups[admin] PASSED [ 20%]
06:44:30 test/integration/test_chgrp.py::TestChgrp::test_chgrp_dry_run[user] PASSED [ 20%]
06:44:31 test/integration/test_chgrp.py::TestChgrp::test_chgrp_new_container[user] PASSED [ 20%]
06:44:31 test/integration/test_chgrp.py::TestChgrp::test_chgrp_new_container[admin] PASSED [ 21%]
06:44:32 test/integration/test_chgrp.py::TestChgrp::test_chgrp_old_container[user] PASSED [ 21%]
06:44:33 test/integration/test_chgrp.py::TestChgrp::test_chgrp_old_container[admin] PASSED [ 21%]
06:45:00 test/integration/test_chown.py::TestChown::test_chown_dry_run[admin] PASSED [ 21%]
06:45:00 test/integration/test_config.py::test_flattenProperties PASSED [ 22%]
06:45:05 test/integration/test_config.py::TestConfig::testDefaultConfig PASSED [ 22%]
06:45:08 test/integration/test_config.py::TestConfig::testDefaultConfigConversion PASSED [ 22%]
06:45:11 test/integration/test_config.py::TestConfig::testUpgradeDropdownMenuConfig[foo-colleagues.label] PASSED [ 22%]
06:45:13 test/integration/test_config.py::TestConfig::testUpgradeDropdownMenuConfig[foo-leaders.label] PASSED [ 23%]
06:45:16 test/integration/test_config.py::TestConfig::testUpgradeDropdownMenuConfig[foo-everyone.label] PASSED [ 23%]
06:45:31 test/integration/test_containers.py::TestContainers::test_add_and_rename_container PASSED [ 23%]
06:45:34 test/integration/test_containers.py::TestContainers::test_add_owned_container PASSED [ 23%]
06:45:34 test/integration/test_containers.py::TestContainers::test_paste_move_remove_deletamany_image PASSED [ 23%]
06:45:38 test/integration/test_containers.py::TestContainers::test_edit_share PASSED [ 24%]
06:45:53 test/integration/test_csrf.py::TestCsrf::test_csrf_middleware_enabled PASSED [ 24%]
06:45:53 test/integration/test_csrf.py::TestCsrf::test_forgot_password PASSED [ 24%]
06:45:53 test/integration/test_csrf.py::TestCsrf::test_move_data PASSED [ 24%]
06:45:53 test/integration/test_csrf.py::TestCsrf::test_add_and_remove_comment PASSED [ 25%]
06:45:53 test/integration/test_csrf.py::TestCsrf::test_attach_file PASSED [ 25%]
06:45:54 test/integration/test_csrf.py::TestCsrf::test_edit_channel_names PASSED [ 25%]
06:45:54 test/integration/test_csrf.py::TestCsrf::test_copy_past_rendering_settings PASSED [ 25%]
06:45:54 test/integration/test_csrf.py::TestCsrf::test_reset_rendering_settings PASSED [ 26%]
06:45:54 test/integration/test_csrf.py::TestCsrf::test_apply_owners_rendering_settings PASSED [ 26%]
06:45:56 test/integration/test_csrf.py::TestCsrf::test_ome_tiff_script PASSED [ 26%]
06:45:56 test/integration/test_csrf.py::TestCsrf::test_script PASSED [ 26%]
06:45:56 test/integration/test_csrf.py::TestCsrf::test_myaccount PASSED [ 26%]
06:45:58 test/integration/test_csrf.py::TestCsrf::test_avatar PASSED [ 27%]
06:46:06 test/integration/test_csrf.py::TestCsrf::test_create_group PASSED [ 27%]
06:46:10 test/integration/test_csrf.py::TestCsrf::test_create_user PASSED [ 27%]
06:46:18 test/integration/test_csrf.py::TestCsrf::test_edit_group PASSED [ 27%]
06:46:25 test/integration/test_csrf.py::TestCsrf::test_edit_user PASSED [ 28%]
06:46:32 test/integration/test_csrf.py::TestCsrf::test_edit_group_by_owner PASSED [ 28%]
06:46:36 test/integration/test_csrf.py::TestCsrf::test_change_password PASSED [ 28%]
06:46:39 test/integration/test_csrf.py::TestCsrf::test_su PASSED [ 28%]
06:46:55 test/integration/test_decorators.py::TestShow::test_conn_cleanup PASSED [ 29%]
06:47:10 test/integration/test_download.py::TestDownload::test_spw_download PASSED [ 29%]
06:47:14 test/integration/test_download.py::TestDownload::test_orphaned_image_direct_download PASSED [ 29%]
06:47:18 test/integration/test_download.py::TestDownload::test_orphaned_image_download PASSED [ 29%]
06:47:22 test/integration/test_download.py::TestDownload::test_image_in_dataset_download PASSED [ 30%]
06:47:26 test/integration/test_download.py::TestDownload::test_image_in_dataset_in_project_download PASSED [ 30%]
06:47:26 test/integration/test_download.py::TestDownload::test_well_download PASSED [ 30%]
06:47:30 test/integration/test_download.py::TestDownload::test_attachment_download PASSED [ 30%]
06:47:46 test/integration/test_download.py::TestDownloadAs::test_download_image_as[jpeg] PASSED [ 30%]
06:47:46 test/integration/test_download.py::TestDownloadAs::test_download_image_as[png] PASSED [ 31%]
06:47:47 test/integration/test_download.py::TestDownloadAs::test_download_image_as[tif] PASSED [ 31%]
06:47:47 test/integration/test_download.py::TestDownloadAs::test_download_images_as_zip[jpeg] PASSED [ 31%]
06:47:48 test/integration/test_download.py::TestDownloadAs::test_download_images_as_zip[png] PASSED [ 31%]
06:47:48 test/integration/test_download.py::TestDownloadAs::test_download_images_as_zip[tif] PASSED [ 32%]
06:48:24 test/integration/test_groups_users.py::TestGroupsUsers::test_group_users_menu PASSED [ 32%]
06:48:40 test/integration/test_histogram.py::TestHistogram::test_histogram_bin_count[None] PASSED [ 32%]
06:48:40 test/integration/test_histogram.py::TestHistogram::test_histogram_bin_count[10] PASSED [ 32%]
06:48:58 test/integration/test_history.py::TestHistory::test_history PASSED [ 33%]
06:48:58 test/integration/test_history.py::TestHistory::test_calendar_default PASSED [ 33%]
06:48:59 test/integration/test_history.py::TestHistory::test_calendar_month PASSED [ 33%]
06:49:14 test/integration/test_links.py::TestLinks::test_link_project_datasets PASSED [ 33%]
06:49:14 test/integration/test_links.py::TestLinks::test_link_datasets_images PASSED [ 33%]
06:49:14 test/integration/test_links.py::TestLinks::test_link_unlink_tagset_tags PASSED [ 34%]
06:49:14 test/integration/test_links.py::TestLinks::test_unlink_screen_plate PASSED [ 34%]
06:49:29 test/integration/test_login.py::TestLogin::test_login_errors[credentials0] PASSED [ 34%]
06:49:29 test/integration/test_login.py::TestLogin::test_login_errors[credentials1] PASSED [ 34%]
06:49:29 test/integration/test_login.py::TestLogin::test_login_errors[credentials2] PASSED [ 35%]
06:49:29 test/integration/test_login.py::TestLogin::test_login_errors[credentials3] PASSED [ 35%]
06:49:29 test/integration/test_login.py::TestLogin::test_get_login_page PASSED [ 35%]
06:49:35 test/integration/test_login.py::TestLogin::test_login_redirect[] PASSED [ 35%]
06:49:42 test/integration/test_login.py::TestLogin::test_login_redirect[/webclient/usertags/] PASSED [ 36%]
06:49:48 test/integration/test_login.py::TestLogin::test_login_view PASSED [ 36%]
06:50:10 test/integration/test_marshal.py::TestImgDetail::test_image_detail PASSED [ 36%]
06:50:27 test/integration/test_metadata.py::TestCoreMetadata::test_pixel_size_units PASSED [ 36%]
06:50:27 test/integration/test_metadata.py::TestCoreMetadata::test_none_pixel_size PASSED [ 36%]
06:50:43 test/integration/test_metadata.py::TestBulkAnnotations::test_nsbulkannotations_file[True] PASSED [ 37%]
06:50:43 test/integration/test_metadata.py::TestBulkAnnotations::test_nsbulkannotations_file[False] PASSED [ 37%]
06:50:43 test/integration/test_metadata.py::TestBulkAnnotations::test_nsbulkannotations_not_file PASSED [ 37%]
06:51:07 test/integration/test_plategrid.py::TestPlateGrid::test_get_plate_grid_metadata[shrink] PASSED [ 37%]
06:51:16 test/integration/test_plategrid.py::TestPlateGrid::test_get_plate_grid_metadata[trim] PASSED [ 38%]
06:51:26 test/integration/test_plategrid.py::TestPlateGrid::test_get_plate_grid_metadata[expand] PASSED [ 38%]
06:51:35 test/integration/test_plategrid.py::TestPlateGrid::test_well_images PASSED [ 38%]
06:51:38 test/integration/test_plategrid.py::TestPlateGrid::test_instantiation PASSED [ 38%]
06:51:41 test/integration/test_plategrid.py::TestPlateGrid::test_metadata_grid_size PASSED [ 39%]
06:51:44 test/integration/test_plategrid.py::TestPlateGrid::test_metadata_thumbnail_url PASSED [ 39%]
06:51:47 test/integration/test_plategrid.py::TestPlateGrid::test_full_grid PASSED [ 39%]
06:51:50 test/integration/test_plategrid.py::TestPlateGrid::test_acquisition_date PASSED [ 39%]
06:51:54 test/integration/test_plategrid.py::TestPlateGrid::test_creation_date PASSED [ 40%]
06:51:57 test/integration/test_plategrid.py::TestPlateGrid::test_description PASSED [ 40%]
06:52:06 test/integration/test_plategrid.py::TestScreenPlateTables::test_get_plate_table PASSED [ 40%]
06:52:22 test/integration/test_rendering.py::TestRendering::test_copy_past_rendering_settings_from_image PASSED [ 40%]
06:52:23 test/integration/test_rendering.py::TestRendering::test_copy_past_rendering_settings_from_url PASSED [ 40%]
06:52:24 test/integration/test_rendering.py::TestRendering::test_all_rendering_defs PASSED [ 41%]
06:52:42 test/integration/test_rendering.py::TestRenderImageRegion::test_render_image_region_incomplete_request PASSED [ 41%]
06:52:46 test/integration/test_rendering.py::TestRenderImageRegion::test_render_image_region_malformed_tile_argument PASSED [ 41%]
06:52:49 test/integration/test_rendering.py::TestRenderImageRegion::test_render_image_region_malformed_region_argument PASSED [ 41%]
06:52:56 test/integration/test_rendering.py::TestRenderImageRegion::test_render_image_region_tile_params PASSED [ 42%]
06:53:00 test/integration/test_rendering.py::TestRenderImageRegion::test_render_image_region_tile_params_large_image PASSED [ 42%]
06:53:03 test/integration/test_rendering.py::TestRenderImageRegion::test_render_image_region_tile_params_negative_resolution PASSED [ 42%]
06:53:06 test/integration/test_rendering.py::TestRenderImageRegion::test_render_image_region_tile_params_invalid_resolution PASSED [ 42%]
06:53:18 test/integration/test_rendering.py::TestRenderImageRegion::test_render_image_region_tile_params_big_image PASSED [ 43%]
06:53:24 test/integration/test_rendering.py::TestRenderImageRegion::test_render_image_region_region_params PASSED [ 43%]
06:53:38 test/integration/test_rendering.py::TestRenderImageRegion::test_render_image_region_region_params_big_image PASSED [ 43%]
06:53:49 test/integration/test_rendering.py::TestRenderImageRegion::test_render_birds_eye_view_big_image PASSED [ 43%]
06:54:02 test/integration/test_rendering.py::TestRenderImageRegion::test_render_image_region_big_image_resolution PASSED [ 43%]
06:54:21 test/integration/test_scripts.py::TestScripts::test_script_ui_defaults PASSED [ 44%]
06:54:26 test/integration/test_scripts.py::TestScripts::test_script_inputs_outputs[inputs0] PASSED [ 44%]
06:54:30 test/integration/test_scripts.py::TestScripts::test_script_inputs_outputs[inputs1] PASSED [ 44%]
06:54:35 test/integration/test_scripts.py::TestScripts::test_script_inputs_outputs[inputs2] PASSED [ 44%]
06:54:51 test/integration/test_scripts.py::TestFigureScripts::test_figure_script_dialog[SplitView] PASSED [ 45%]
06:54:52 test/integration/test_scripts.py::TestFigureScripts::test_figure_script_dialog[Thumbnail] PASSED [ 45%]
06:54:53 test/integration/test_scripts.py::TestFigureScripts::test_figure_script_dialog[MakeMovie] PASSED [ 45%]
06:55:08 test/integration/test_show.py::TestShow::test_empty_path PASSED [ 45%]
06:55:08 test/integration/test_show.py::TestShow::test_project_legacy_path PASSED [ 46%]
06:55:08 test/integration/test_show.py::TestShow::test_projects_legacy_show PASSED [ 46%]
06:55:08 test/integration/test_show.py::TestShow::test_project_dataset_legacy_path PASSED [ 46%]
06:55:08 test/integration/test_show.py::TestShow::test_project_dataset_image_legacy_path PASSED [ 46%]
06:55:08 test/integration/test_show.py::TestShow::test_tag_redirect[1] PASSED [ 46%]
06:55:08 test/integration/test_show.py::TestShow::test_tag_redirect[2] PASSED [ 47%]
06:55:08 test/integration/test_show.py::TestShow::test_tagset_redirect[1] PASSED [ 47%]
06:55:08 test/integration/test_show.py::TestShow::test_tagset_redirect[2] PASSED [ 47%]
06:55:08 test/integration/test_show.py::TestShow::test_tag_legacy_path[1] PASSED [ 47%]
06:55:08 test/integration/test_show.py::TestShow::test_tag_legacy_path[2] PASSED [ 48%]
06:55:08 test/integration/test_show.py::TestShow::test_tagset_tag_legacy_path PASSED [ 48%]
06:55:08 test/integration/test_show.py::TestShow::test_image_legacy_path PASSED [ 48%]
06:55:08 test/integration/test_show.py::TestShow::test_screen_legacy_path PASSED [ 48%]
06:55:08 test/integration/test_show.py::TestShow::test_screen_plate_legacy_path PASSED [ 49%]
06:55:08 test/integration/test_show.py::TestShow::test_screen_plate_well_show PASSED [ 49%]
06:55:08 test/integration/test_show.py::TestShow::test_screen_plate_run_well_show[0] PASSED [ 49%]
06:55:08 test/integration/test_show.py::TestShow::test_screen_plate_run_well_show[1] PASSED [ 49%]
06:55:08 test/integration/test_show.py::TestShow::test_project_dataset_image_show PASSED [ 50%]
06:55:09 test/integration/test_show.py::TestShow::test_project_dataset_image_roi_show PASSED [ 50%]
06:55:09 test/integration/test_show.py::TestShow::test_project_by_id PASSED [ 50%]
06:55:09 test/integration/test_show.py::TestShow::test_project_by_name PASSED [ 50%]
06:55:09 test/integration/test_show.py::TestShow::test_tag_by_value[1] PASSED [ 50%]
06:55:09 test/integration/test_show.py::TestShow::test_tag_by_value[2] PASSED [ 51%]
06:55:09 test/integration/test_show.py::TestShow::test_tagset_tag_by_id PASSED [ 51%]
06:55:09 test/integration/test_show.py::TestShow::test_multiple_well_by_id[plate.name=%(plate_name)s|well.name=%(well_name)s-A10] PASSED [ 51%]
06:55:09 test/integration/test_show.py::TestShow::test_multiple_well_by_id[plate.name=%(plate_name)s|well.name=%(well_name)s-1J] PASSED [ 51%]
06:55:09 test/integration/test_show.py::TestShow::test_screen_plate_run_well_by_name[plate.name=%(plate_name)s|well.name=%(well_name)s-A10] PASSED [ 52%]
06:55:09 test/integration/test_show.py::TestShow::test_screen_plate_run_well_by_name[plate.name=%(plate_name)s|well.name=%(well_name)s-1J] PASSED [ 52%]
06:55:09 test/integration/test_show.py::TestShow::test_multiple_well_by_id[run=%(plate_acquisition_id)s|well.name=%(well_name)s-A10] PASSED [ 52%]
06:55:09 test/integration/test_show.py::TestShow::test_multiple_well_by_id[run=%(plate_acquisition_id)s|well.name=%(well_name)s-1J] PASSED [ 52%]
06:55:09 test/integration/test_show.py::TestShow::test_screen_plate_run_well_by_name[run=%(plate_acquisition_id)s|well.name=%(well_name)s-A10] PASSED [ 53%]
06:55:09 test/integration/test_show.py::TestShow::test_screen_plate_run_well_by_name[run=%(plate_acquisition_id)s|well.name=%(well_name)s-1J] PASSED [ 53%]
06:55:09 test/integration/test_show.py::TestShow::test_well_by_name[A10] PASSED [ 53%]
06:55:09 test/integration/test_show.py::TestShow::test_well_by_name[1J] PASSED [ 53%]
06:55:09 test/integration/test_show.py::TestShow::test_screen_plate_run_illegal_run PASSED [ 53%]
06:55:09 test/integration/test_show.py::TestShow::test_path_to_no_objects PASSED [ 54%]
06:55:09 test/integration/test_show.py::TestShow::test_project_dataset_image PASSED [ 54%]
06:55:09 test/integration/test_show.py::TestShow::test_project_dataset_images_pagination PASSED [ 54%]
06:55:09 test/integration/test_show.py::TestShow::test_orphaned_pagination PASSED [ 54%]
06:55:09 test/integration/test_show.py::TestShow::test_get_image_ids_dataset PASSED [ 55%]
06:55:09 test/integration/test_show.py::TestShow::test_image PASSED [ 55%]
06:55:09 test/integration/test_show.py::TestShow::test_roi PASSED [ 55%]
06:55:09 test/integration/test_show.py::TestShow::test_shape PASSED [ 55%]
06:55:09 test/integration/test_show.py::TestShow::test_well_image_shape PASSED [ 56%]
06:55:10 test/integration/test_show.py::TestShow::test_image_orphan PASSED [ 56%]
06:55:10 test/integration/test_show.py::TestShow::test_image_multi_link PASSED [ 56%]
06:55:10 test/integration/test_show.py::TestShow::test_image_multi_link_restrict_dataset PASSED [ 56%]
06:55:10 test/integration/test_show.py::TestShow::test_image_multi_link_restrict_dataset_project PASSED [ 56%]
06:55:10 test/integration/test_show.py::TestShow::test_image_multi_link_restrict_project PASSED [ 57%]
06:55:10 test/integration/test_show.py::TestShow::test_dataset PASSED [ 57%]
06:55:10 test/integration/test_show.py::TestShow::test_dataset_multi_link PASSED [ 57%]
06:55:10 test/integration/test_show.py::TestShow::test_dataset_multi_link_restrict_project PASSED [ 57%]
06:55:10 test/integration/test_show.py::TestShow::test_dataset_orphan PASSED [ 58%]
06:55:10 test/integration/test_show.py::TestShow::test_project PASSED [ 58%]
06:55:10 test/integration/test_show.py::TestShow::test_acquisition PASSED [ 58%]
06:55:10 test/integration/test_show.py::TestShow::test_acquisition_restrict_plate PASSED [ 58%]
06:55:10 test/integration/test_show.py::TestShow::test_acquisition_restrict_screen PASSED [ 59%]
06:55:10 test/integration/test_show.py::TestShow::test_acquisition_restrict_plate_screen PASSED [ 59%]
06:55:10 test/integration/test_show.py::TestShow::test_well PASSED [ 59%]
06:55:10 test/integration/test_show.py::TestShow::test_well_multi PASSED [ 59%]
06:55:10 test/integration/test_show.py::TestShow::test_well_image PASSED [ 60%]
06:55:10 test/integration/test_show.py::TestShow::test_well_restrict_acquisition_multi PASSED [ 60%]
06:55:10 test/integration/test_show.py::TestShow::test_well_restrict_plate_multi PASSED [ 60%]
06:55:10 test/integration/test_show.py::TestShow::test_well_restrict_screen_multi PASSED [ 60%]
06:55:10 test/integration/test_show.py::TestShow::test_well_restrict_acquisition_plate_multi PASSED [ 60%]
06:55:10 test/integration/test_show.py::TestShow::test_well_restrict_acquisition_screen_multi PASSED [ 61%]
06:55:10 test/integration/test_show.py::TestShow::test_well_restrict_acquisition_plate_screen_multi PASSED [ 61%]
06:55:10 test/integration/test_show.py::TestShow::test_well_restrict_plate_screen_multi PASSED [ 61%]
06:55:10 test/integration/test_show.py::TestShow::test_plate PASSED [ 61%]
06:55:10 test/integration/test_show.py::TestShow::test_plate_restrict_screen PASSED [ 62%]
06:55:11 test/integration/test_show.py::TestShow::test_screen PASSED [ 62%]
06:55:14 test/integration/test_simple.py::TestSimple::testCurrentUser PASSED [ 62%]
06:55:18 test/integration/test_simple.py::TestSimple::testImport PASSED [ 62%]
06:55:42 test/integration/test_table.py::TestOmeroTables::test_table_html PASSED [ 63%]
06:55:51 test/integration/test_table.py::TestOmeroTables::test_table_pagination PASSED [ 63%]
06:56:01 test/integration/test_table.py::TestOmeroTables::test_table_query PASSED [ 63%]
06:56:10 test/integration/test_table.py::TestOmeroTables::test_table_bitmask[query_result0] PASSED [ 63%]
06:56:19 test/integration/test_table.py::TestOmeroTables::test_table_bitmask[query_result1] PASSED [ 63%]
06:56:29 test/integration/test_table.py::TestOmeroTables::test_table_bitmask[query_result2] PASSED [ 64%]
06:56:38 test/integration/test_table.py::TestOmeroTables::test_table_bitmask[query_result3] PASSED [ 64%]
06:56:47 test/integration/test_table.py::TestOmeroTables::test_table_bitmask[query_result4] PASSED [ 64%]
06:56:57 test/integration/test_table.py::TestOmeroTables::test_table_bitmask[query_result5] PASSED [ 64%]
06:57:06 test/integration/test_table.py::TestOmeroTables::test_table_metadata PASSED [ 65%]
06:57:16 test/integration/test_table.py::TestOmeroTables::test_table_get_where_list[query_result0] PASSED [ 65%]
06:57:25 test/integration/test_table.py::TestOmeroTables::test_table_get_where_list[query_result1] PASSED [ 65%]
06:57:34 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice[query_result0] PASSED [ 65%]
06:57:43 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice[query_result1] PASSED [ 66%]
06:57:53 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice[query_result2] PASSED [ 66%]
06:58:02 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice_errors[query_validity0] PASSED [ 66%]
06:58:11 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice_errors[query_validity1] PASSED [ 66%]
06:58:20 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice_errors[query_validity2] PASSED [ 66%]
06:58:29 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice_errors[query_validity3] PASSED [ 67%]
06:58:38 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice_errors[query_validity4] PASSED [ 67%]
06:58:47 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice_errors[query_validity5] PASSED [ 67%]
06:58:56 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice_errors[query_validity6] PASSED [ 67%]
06:59:05 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice_errors[query_validity7] PASSED [ 68%]
06:59:13 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice_errors[query_validity8] PASSED [ 68%]
06:59:23 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice_errors[query_validity9] PASSED [ 68%]
06:59:38 test/integration/test_tags.py::TestTags::test_create_tag_and_tagset PASSED [ 68%]
06:59:38 test/integration/test_tags.py::TestTags::test_edit_tag_and_tagset[tagset] PASSED [ 69%]
06:59:38 test/integration/test_tags.py::TestTags::test_edit_tag_and_tagset[tag] PASSED [ 69%]
06:59:38 test/integration/test_tags.py::TestTags::test_add_edit_and_remove_tag PASSED [ 69%]
06:59:54 test/integration/test_tags.py::TestTags::test_add_remove_tags PASSED [ 69%]
07:00:09 test/integration/test_thumbnails.py::TestThumbnails::test_default_thumb_size[None] PASSED [ 70%]
07:00:10 test/integration/test_thumbnails.py::TestThumbnails::test_default_thumb_size[100] PASSED [ 70%]
07:00:10 test/integration/test_thumbnails.py::TestThumbnails::test_base64_thumb[None] PASSED [ 70%]
07:00:10 test/integration/test_thumbnails.py::TestThumbnails::test_base64_thumb[100] PASSED [ 70%]
07:00:11 test/integration/test_thumbnails.py::TestThumbnails::test_base64_thumb_set PASSED [ 70%]
07:00:27 test/integration/test_thumbnails.py::TestRoiThumbnails::test_roi_thumbnail[0-1] PASSED [ 71%]
07:00:28 test/integration/test_thumbnails.py::TestRoiThumbnails::test_roi_thumbnail[0-0] PASSED [ 71%]
07:00:29 test/integration/test_thumbnails.py::TestRoiThumbnails::test_roi_thumbnail[1-1] PASSED [ 71%]
07:00:30 test/integration/test_thumbnails.py::TestRoiThumbnails::test_roi_thumbnail[1-0] PASSED [ 71%]
07:00:40 test/integration/test_tree.py::TestTree::test_marshal_experimenter PASSED [ 72%]
07:00:43 test/integration/test_tree.py::TestTree::test_marshal_projects_no_results PASSED [ 72%]
07:00:46 test/integration/test_tree.py::TestTree::test_marshal_projects_user PASSED [ 72%]
07:00:51 test/integration/test_tree.py::TestTree::test_marshal_projects_another_user PASSED [ 72%]
07:00:54 test/integration/test_tree.py::TestTree::test_marshal_projects_another_group PASSED [ 73%]
07:00:57 test/integration/test_tree.py::TestTree::test_marshal_projects_all_groups PASSED [ 73%]
07:01:02 test/integration/test_tree.py::TestTree::test_marshal_projects_all_users PASSED [ 73%]
07:01:07 test/integration/test_tree.py::TestTree::test_marshal_projects_all_groups_all_users PASSED [ 73%]
07:01:10 test/integration/test_tree.py::TestTree::test_marshal_datasets_no_results PASSED [ 73%]
07:01:13 test/integration/test_tree.py::TestTree::test_marshal_datasets_user PASSED [ 74%]
07:01:18 test/integration/test_tree.py::TestTree::test_marshal_datasets_another_user PASSED [ 74%]
07:01:21 test/integration/test_tree.py::TestTree::test_marshal_datasets_another_group PASSED [ 74%]
07:01:24 test/integration/test_tree.py::TestTree::test_marshal_datasets_all_groups PASSED [ 74%]
07:01:29 test/integration/test_tree.py::TestTree::test_marshal_datasets_all_users PASSED [ 75%]
07:01:34 test/integration/test_tree.py::TestTree::test_marshal_datasets_all_groups_all_users PASSED [ 75%]
07:01:37 test/integration/test_tree.py::TestTree::test_marshal_datasets_project PASSED [ 75%]
07:01:42 test/integration/test_tree.py::TestTree::test_marshal_datasets_project_crosslink PASSED [ 75%]
07:01:45 test/integration/test_tree.py::TestTree::test_marshal_images_no_results PASSED [ 76%]
07:01:48 test/integration/test_tree.py::TestTree::test_marshal_images_user PASSED [ 76%]
07:01:50 test/integration/test_tree.py::TestTree::test_marshal_images_user_pixels PASSED [ 76%]
07:01:53 test/integration/test_tree.py::TestTree::test_marshal_images_thumb_version[thumb0] PASSED [ 76%]
07:01:56 test/integration/test_tree.py::TestTree::test_marshal_images_thumb_version[thumb1] PASSED [ 76%]
07:02:02 test/integration/test_tree.py::TestTree::test_marshal_images_another_user PASSED [ 77%]
07:02:04 test/integration/test_tree.py::TestTree::test_marshal_images_another_group PASSED [ 77%]
07:02:07 test/integration/test_tree.py::TestTree::test_marshal_images_all_groups PASSED [ 77%]
07:02:12 test/integration/test_tree.py::TestTree::test_marshal_images_all_users PASSED [ 77%]
07:02:18 test/integration/test_tree.py::TestTree::test_marshal_images_all_groups_all_users PASSED [ 78%]
07:02:21 test/integration/test_tree.py::TestTree::test_marshal_images_dataset PASSED [ 78%]
07:02:23 test/integration/test_tree.py::TestTree::test_marshal_images_dataset_no_pixels PASSED [ 78%]
07:02:26 test/integration/test_tree.py::TestTree::test_marshal_images_dataset_date PASSED [ 78%]
07:02:31 test/integration/test_tree.py::TestTree::test_marshal_images_dataset_crosslink PASSED [ 79%]
07:02:37 test/integration/test_tree.py::TestTree::test_marshal_images_share PASSED [ 79%]
07:02:39 test/integration/test_tree.py::TestTree::test_marshal_screens_no_results PASSED [ 79%]
07:02:42 test/integration/test_tree.py::TestTree::test_marshal_screens_user PASSED [ 79%]
07:02:48 test/integration/test_tree.py::TestTree::test_marshal_screens_another_user PASSED [ 80%]
07:02:50 test/integration/test_tree.py::TestTree::test_marshal_screens_another_group PASSED [ 80%]
07:02:53 test/integration/test_tree.py::TestTree::test_marshal_screens_all_groups PASSED [ 80%]
07:02:58 test/integration/test_tree.py::TestTree::test_marshal_screens_all_users PASSED [ 80%]
07:03:04 test/integration/test_tree.py::TestTree::test_marshal_screens_all_groups_all_users PASSED [ 80%]
07:03:06 test/integration/test_tree.py::TestTree::test_marshal_plates_no_results PASSED [ 81%]
07:03:09 test/integration/test_tree.py::TestTree::test_marshal_plates_user PASSED [ 81%]
07:03:14 test/integration/test_tree.py::TestTree::test_marshal_plates_another_user PASSED [ 81%]
07:03:17 test/integration/test_tree.py::TestTree::test_marshal_plates_another_group PASSED [ 81%]
07:03:20 test/integration/test_tree.py::TestTree::test_marshal_plates_all_groups PASSED [ 82%]
07:03:25 test/integration/test_tree.py::TestTree::test_marshal_plates_all_users PASSED [ 82%]
07:03:31 test/integration/test_tree.py::TestTree::test_marshal_plates_all_groups_all_users PASSED [ 82%]
07:03:33 test/integration/test_tree.py::TestTree::test_marshal_plate_acquisitions_no_results PASSED [ 82%]
07:03:36 test/integration/test_tree.py::TestTree::test_marshal_plate_acquisitions_user PASSED [ 83%]
07:03:41 test/integration/test_tree.py::TestTree::test_marshal_plate_acquisitions_another_user PASSED [ 83%]
07:03:44 test/integration/test_tree.py::TestTree::test_marshal_plate_acquisitions_another_group PASSED [ 83%]
07:03:47 test/integration/test_tree.py::TestTree::test_marshal_orphaned_no_results PASSED [ 83%]
07:03:50 test/integration/test_tree.py::TestTree::test_marshal_orphaned PASSED [ 83%]
07:03:55 test/integration/test_tree.py::TestTree::test_marshal_orphaned_another_user PASSED [ 84%]
07:03:58 test/integration/test_tree.py::TestTree::test_marshal_orphaned_another_group PASSED [ 84%]
07:04:01 test/integration/test_tree.py::TestTree::test_marshal_orphaned_all_groups PASSED [ 84%]
07:04:04 test/integration/test_tree.py::TestTree::test_marshal_tags_no_results PASSED [ 84%]
07:04:09 test/integration/test_tree.py::TestTree::test_marshal_tags_user PASSED [ 85%]
07:04:15 test/integration/test_tree.py::TestTree::test_marshal_tags_another_user PASSED [ 85%]
07:04:17 test/integration/test_tree.py::TestTree::test_marshal_tags_another_group PASSED [ 85%]
07:04:23 test/integration/test_tree.py::TestTree::test_marshal_tags_all_groups PASSED [ 85%]
07:04:29 test/integration/test_tree.py::TestTree::test_marshal_tags_all_users PASSED [ 86%]
07:04:34 test/integration/test_tree.py::TestTree::test_marshal_tags_all_groups_all_users PASSED [ 86%]
07:04:40 test/integration/test_tree.py::TestTree::test_marshal_tags_orphaned PASSED [ 86%]
07:04:45 test/integration/test_tree.py::TestTree::test_marshal_tags_tagset PASSED [ 86%]
07:04:48 test/integration/test_tree.py::TestTree::test_marshal_tagged_no_results PASSED [ 86%]
07:04:53 test/integration/test_tree.py::TestTree::test_marshal_tagged_user PASSED [ 87%]
07:04:59 test/integration/test_tree.py::TestTree::test_marshal_tagged_perms PASSED [ 87%]
07:05:02 test/integration/test_tree.py::TestTree::test_marshal_tagged_image_pixels PASSED [ 87%]
07:05:07 test/integration/test_tree.py::TestTree::test_marshal_shares_user PASSED [ 87%]
07:05:13 test/integration/test_tree.py::TestTree::test_marshal_shares_another_user PASSED [ 88%]
07:05:18 test/integration/test_tree.py::TestTree::test_marshal_shares_user_owned PASSED [ 88%]
07:05:24 test/integration/test_tree.py::TestTree::test_marshal_shares_another_user_owned PASSED [ 88%]
07:05:29 test/integration/test_tree.py::TestTree::test_marshal_discussions_user PASSED [ 88%]
07:05:34 test/integration/test_tree.py::TestTree::test_marshal_discussions_another_user PASSED [ 89%]
07:05:40 test/integration/test_tree.py::TestTree::test_marshal_discussions_user_owned PASSED [ 89%]
07:05:45 test/integration/test_tree.py::TestTree::test_marshal_discussions_another_user_owned PASSED [ 89%]
07:05:53 test/integration/test_tree_annotations.py::TestTreeAnnotations::test_single_tag PASSED [ 89%]
07:05:59 test/integration/test_tree_annotations.py::TestTreeAnnotations::test_single_tag_userB PASSED [ 90%]
07:06:05 test/integration/test_tree_annotations.py::TestTreeAnnotations::test_twin_tags_userA_userB PASSED [ 90%]
07:06:10 test/integration/test_tree_annotations.py::TestTreeAnnotations::test_twin_tags_projects PASSED [ 90%]
07:06:16 test/integration/test_tree_annotations.py::TestTreeAnnotations::test_tags_comments_project PASSED [ 90%]
07:06:18 test/integration/test_tree_annotations.py::TestTreeAnnotations::test_filter_by_namespace PASSED [ 90%]
07:06:46 test/integration/test_webadmin.py::TestUserSettings::test_user_settings_page PASSED [ 91%]
07:06:55 test/integration/test_webadmin.py::TestUserSettings::test_edit_settings PASSED [ 91%]
07:07:14 test/integration/test_webadmin.py::TestExperimenters::test_create_experimenter_roles[user] PASSED [ 91%]
07:07:19 test/integration/test_webadmin.py::TestExperimenters::test_create_experimenter_roles[restricted_administrator] PASSED [ 91%]
07:07:24 test/integration/test_webadmin.py::TestExperimenters::test_create_experimenter_roles[administrator] PASSED [ 92%]
07:07:29 test/integration/test_webadmin.py::TestExperimenters::test_required_fields[required_field0] PASSED [ 92%]
07:07:35 test/integration/test_webadmin.py::TestExperimenters::test_required_fields[required_field1] PASSED [ 92%]
07:07:40 test/integration/test_webadmin.py::TestExperimenters::test_required_fields[required_field2] PASSED [ 92%]
07:07:45 test/integration/test_webadmin.py::TestExperimenters::test_required_fields[required_field3] PASSED [ 93%]
07:07:51 test/integration/test_webadmin.py::TestExperimenters::test_required_fields[required_field4] PASSED [ 93%]
07:07:57 test/integration/test_webadmin.py::TestExperimenters::test_required_fields[required_field5] PASSED [ 93%]
07:08:02 test/integration/test_webadmin.py::TestExperimenters::test_required_fields[required_field6] PASSED [ 93%]
07:08:06 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin[privilege0] PASSED [ 93%]
07:08:11 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin[privilege1] PASSED [ 94%]
07:08:15 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin[privilege2] PASSED [ 94%]
07:08:19 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin[privilege3] PASSED [ 94%]
07:08:24 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin[privilege4] PASSED [ 94%]
07:08:28 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin[privilege5] PASSED [ 95%]
07:08:32 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin[privilege6] PASSED [ 95%]
07:08:37 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin[privilege7] PASSED [ 95%]
07:08:41 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin[privilege8] PASSED [ 95%]
07:08:45 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin[privilege9] PASSED [ 96%]
07:08:59 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin_form[privileges0] PASSED [ 96%]
07:09:12 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin_form[privileges1] PASSED [ 96%]
07:09:25 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin_form[privileges2] PASSED [ 96%]
07:09:38 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin_form[privileges3] PASSED [ 96%]
07:09:51 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin_form[privileges4] PASSED [ 97%]
07:10:10 test/integration/test_webadmin.py::TestExperimenters::test_restricted_admin_create_edit_user PASSED [ 97%]
07:10:42 test/integration/test_webadmin.py::TestGroups::test_new_group_form[privileges0] PASSED [ 97%]
07:11:01 test/integration/test_webadmin.py::TestGroups::test_new_group_form[privileges1] PASSED [ 97%]
07:11:21 test/integration/test_webadmin.py::TestGroups::test_new_group_form[privileges2] PASSED [ 98%]
07:11:29 test/integration/test_webadmin.py::TestGroups::test_create_group_permissions[permissions0] PASSED [ 98%]
07:11:37 test/integration/test_webadmin.py::TestGroups::test_create_group_permissions[permissions1] PASSED [ 98%]
07:11:46 test/integration/test_webadmin.py::TestGroups::test_create_group_permissions[permissions2] PASSED [ 98%]
07:11:54 test/integration/test_webadmin.py::TestGroups::test_create_group_permissions[permissions3] PASSED [ 99%]
07:12:01 test/integration/test_webadmin.py::TestGroups::test_required_fields[required_field0] PASSED [ 99%]
07:12:07 test/integration/test_webadmin.py::TestGroups::test_required_fields[required_field1] PASSED [ 99%]
07:13:00 test/integration/test_webadmin.py::TestGroups::test_validation_errors PASSED [ 99%]
07:13:11 test/integration/test_webadmin.py::TestGroups::test_save_experimenter PASSED [100%]
07:13:11 =============================== warnings summary ===============================
07:13:11 ../../../../.venv3/lib64/python3.9/site-packages/Ice.py:14
07:13:11 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/Ice.py:14: DeprecationWarning: the imp module is deprecated in favour of importlib; see the module's documentation for alternative uses
07:13:11 import sys, string, imp, os, threading, warnings, datetime
07:13:11 ../../../../.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:241
07:13:11 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:241: RemovedInDjango50Warning: The default value of USE_TZ will change from False to True in Django 5.0. Set USE_TZ to False in your project settings if you want to keep the current default behavior.
07:13:11 warnings.warn(
07:13:11 ../../../../.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:289
07:13:11 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:289: RemovedInDjango51Warning: The STATICFILES_STORAGE setting is deprecated. Use STORAGES instead.
07:13:11 warnings.warn(STATICFILES_STORAGE_DEPRECATED_MSG, RemovedInDjango51Warning)
07:13:11 ../../../../.venv3/lib64/python3.9/site-packages/pipeline/__init__.py:1
07:13:11 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/pipeline/__init__.py:1: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html
07:13:11 from pkg_resources import DistributionNotFound, get_distribution
07:13:11 OmeroWeb/test/integration/test_annotate.py: 69 warnings
07:13:11 OmeroWeb/test/integration/test_api_containers.py: 177 warnings
07:13:11 OmeroWeb/test/integration/test_api_errors.py: 19 warnings
07:13:11 OmeroWeb/test/integration/test_api_experimenters_groups.py: 57 warnings
07:13:11 OmeroWeb/test/integration/test_api_images.py: 13 warnings
07:13:11 OmeroWeb/test/integration/test_api_login.py: 8 warnings
07:13:11 OmeroWeb/test/integration/test_api_projects.py: 87 warnings
07:13:11 OmeroWeb/test/integration/test_api_rois.py: 25 warnings
07:13:11 OmeroWeb/test/integration/test_api_wells.py: 20 warnings
07:13:11 OmeroWeb/test/integration/test_chgrp.py: 43 warnings
07:13:11 OmeroWeb/test/integration/test_chown.py: 16 warnings
07:13:11 OmeroWeb/test/integration/test_config.py: 5 warnings
07:13:11 OmeroWeb/test/integration/test_containers.py: 19 warnings
07:13:11 OmeroWeb/test/integration/test_csrf.py: 38 warnings
07:13:11 OmeroWeb/test/integration/test_decorators.py: 5 warnings
07:13:11 OmeroWeb/test/integration/test_download.py: 28 warnings
07:13:11 OmeroWeb/test/integration/test_groups_users.py: 10 warnings
07:13:11 OmeroWeb/test/integration/test_histogram.py: 7 warnings
07:13:11 OmeroWeb/test/integration/test_history.py: 12 warnings
07:13:11 OmeroWeb/test/integration/test_links.py: 20 warnings
07:13:11 OmeroWeb/test/integration/test_login.py: 13 warnings
07:13:11 OmeroWeb/test/integration/test_marshal.py: 6 warnings
07:13:11 OmeroWeb/test/integration/test_metadata.py: 16 warnings
07:13:11 OmeroWeb/test/integration/test_plategrid.py: 29 warnings
07:13:11 OmeroWeb/test/integration/test_rendering.py: 66 warnings
07:13:11 OmeroWeb/test/integration/test_scripts.py: 38 warnings
07:13:11 OmeroWeb/test/integration/test_show.py: 4 warnings
07:13:11 OmeroWeb/test/integration/test_table.py: 110 warnings
07:13:11 OmeroWeb/test/integration/test_tags.py: 26 warnings
07:13:11 OmeroWeb/test/integration/test_thumbnails.py: 68 warnings
07:13:11 OmeroWeb/test/integration/test_webadmin.py: 104 warnings
07:13:11 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/django/core/serializers/base.py:22: RemovedInDjango50Warning: PickleSerializer is deprecated due to its security risk. Use JSONSerializer instead.
07:13:11 warnings.warn(
07:13:11 OmeroWeb/test/integration/test_api_containers.py: 67 warnings
07:13:11 OmeroWeb/test/integration/test_api_images.py: 6 warnings
07:13:11 OmeroWeb/test/integration/test_api_wells.py: 24 warnings
07:13:11 OmeroWeb/test/integration/test_containers.py: 2 warnings
07:13:11 OmeroWeb/test/integration/test_csrf.py: 5 warnings
07:13:11 OmeroWeb/test/integration/test_download.py: 9 warnings
07:13:11 OmeroWeb/test/integration/test_histogram.py: 2 warnings
07:13:11 OmeroWeb/test/integration/test_metadata.py: 2 warnings
07:13:11 OmeroWeb/test/integration/test_rendering.py: 17 warnings
07:13:11 OmeroWeb/test/integration/test_scripts.py: 30 warnings
07:13:11 OmeroWeb/test/integration/test_thumbnails.py: 23 warnings
07:13:11 OmeroWeb/test/integration/test_tree.py: 20 warnings
07:13:11 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/script_utils.py:1093: DeprecationWarning: tostring() is deprecated. Use tobytes() instead.
07:13:11 converted_plane = byte_swapped_plane.tostring()
07:13:11 OmeroWeb/test/integration/test_api_errors.py::TestErrors::test_marshal_type
07:13:11 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_marshal/__init__.py:44: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead
07:13:11 logger.warn('Requested unknown decoder %s' % t, exc_info=True)
07:13:11 OmeroWeb/test/integration/test_api_errors.py::TestErrors::test_marshal_validation
07:13:11 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_marshal/__init__.py:97: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead
07:13:11 logger.warn('Requested unknown decoder %s' % t, exc_info=True)
07:13:11 OmeroWeb/test/integration/test_api_errors.py::TestErrors::test_security_violation
07:13:11 OmeroWeb/test/integration/test_api_errors.py::TestErrors::test_validation_exception
07:13:11 OmeroWeb/test/integration/test_api_errors.py::TestErrors::test_project_validation
07:13:11 OmeroWeb/test/integration/test_api_projects.py::TestProjects::test_project_delete
07:13:11 OmeroWeb/test/integration/test_api_rois.py::TestContainers::test_roi_delete
07:13:11 OmeroWeb/test/integration/test_links.py::TestLinks::test_link_datasets_images
07:13:11 OmeroWeb/test/integration/test_links.py::TestLinks::test_link_datasets_images
07:13:11 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py:4810: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead
07:13:11 logger.warn("%s on %s to <%s> %s(%r, %r)",
07:13:11 OmeroWeb/test/integration/test_metadata.py::TestBulkAnnotations::test_nsbulkannotations_file[True]
07:13:11 OmeroWeb/test/integration/test_metadata.py::TestBulkAnnotations::test_nsbulkannotations_file[False]
07:13:11 OmeroWeb/test/integration/test_metadata.py::TestBulkAnnotations::test_nsbulkannotations_not_file
07:13:11 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omeroweb/testlib/__init__.py:478: DeprecationWarning: This method is deprecated as of OMERO 5.4.0. Use get
07:13:11 warnings.warn(
07:13:11 OmeroWeb/test/integration/test_rendering.py::TestRendering::test_copy_past_rendering_settings_from_url
07:13:11 OmeroWeb/test/integration/test_rendering.py::TestRendering::test_copy_past_rendering_settings_from_url
07:13:11 OmeroWeb/test/integration/test_rendering.py::TestRendering::test_copy_past_rendering_settings_from_url
07:13:11 OmeroWeb/test/integration/test_rendering.py::TestRenderImageRegion::test_render_image_region_incomplete_request
07:13:11 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py:8856: DeprecationWarning: setActiveChannels() is deprecated in OMERO 5.4.0.Use set_active_channels
07:13:11 warnings.warn("setActiveChannels() is deprecated in OMERO 5.4.0."
07:13:11 OmeroWeb/test/integration/test_rendering.py::TestRendering::test_copy_past_rendering_settings_from_url
07:13:11 OmeroWeb/test/integration/test_rendering.py::TestRendering::test_copy_past_rendering_settings_from_url
07:13:11 OmeroWeb/test/integration/test_rendering.py::TestRendering::test_copy_past_rendering_settings_from_url
07:13:11 OmeroWeb/test/integration/test_rendering.py::TestRendering::test_copy_past_rendering_settings_from_url
07:13:11 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py:9118: DeprecationWarning: Deprecated in 5.4.0. Use setChannelInverted()
07:13:11 warnings.warn("Deprecated in 5.4.0. Use setChannelInverted()",
07:13:11 -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
07:13:11 - generated xml file: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb/target/reports/integration/junit-results.xml -
07:13:11 =============== 430 passed, 1389 warnings in 2571.43s (0:42:51) ================
07:13:12 !! 10/27/24 07:13:12.753 error: 8 communicators not destroyed during global destruction.
07:13:12
07:13:12 BUILD SUCCESSFUL
07:13:12 Total time: 42 minutes 53 seconds
07:13:12 + /home/omero/workspace/OMERO-test-integration/src/build.py -f components/tools/OmeroPy/build.xml integration -DMARK=broken -Dtestreports.dir=target/reports/broken
07:13:12 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
07:13:13 Buildfile: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/build.xml
07:13:14 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy...
07:13:14 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy...
07:13:14
07:13:14 python-integration:
07:13:14 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/target/reports/broken
07:13:17 ============================= test session starts ==============================
07:13:17 platform linux -- Python 3.9.18, pytest-8.3.3, pluggy-1.5.0 -- /home/omero/workspace/OMERO-test-integration/.venv3/bin/python3
07:13:17 cachedir: .pytest_cache
07:13:17 django: version: 4.2.16, settings: omeroweb.settings (from ini)
07:13:17 rootdir: /home/omero/workspace/OMERO-test-integration/src/components/tools
07:13:17 configfile: pytest.ini
07:13:17 plugins: xdist-3.6.1, mock-3.14.0, django-4.9.0
07:13:22 collecting ... collected 2061 items / 2025 deselected / 36 selected
07:13:25 test/integration/clitest/test_fs.py::TestFS::testRenameAdminOnly FAILED [ 2%]
07:13:40 test/integration/clitest/test_import.py::TestImport::testTargetInDifferentGroup[Dataset-test.fake--d] FAILED [ 5%]
07:13:52 test/integration/clitest/test_import.py::TestImport::testTargetInDifferentGroup[Screen-SPW&plates=1&plateRows=1&plateCols=1&fields=1&plateAcqs=1.fake--r] FAILED [ 8%]
07:13:54 test/integration/gatewaytest/test_multi_group.py::TestHistory::testCreateHistory FAILED [ 11%]
07:14:11 test/integration/gatewaytest/test_multi_group.py::TestScript::testRunScript FAILED [ 13%]
07:14:17 test/integration/gatewaytest/test_performance.py::TestPerformance::testListFileAnnotations FAILED [ 16%]
07:14:18 test/integration/gatewaytest/test_user.py::TestUser::testCrossGroupRead FAILED [ 19%]
07:14:22 test/integration/scriptstest/test_ping.py::TestPing::testProcessCallback FAILED [ 22%]
07:14:37 test/integration/scriptstest/test_repo.py::TestScriptRepo::testGetGroupScripts FAILED [ 25%]
07:14:40 test/integration/tablestest/test_service.py::TestTables::test2098 FAILED [ 27%]
07:14:40 test/integration/tablestest/test_service.py::TestTables::testReadOnlyFile FAILED [ 30%]
07:14:40 test/integration/tablestest/test_service.py::TestTables::testReadEqual FAILED [ 33%]
07:14:40 test/integration/tablestest/test_service.py::TestTables::testReadOutOfRange FAILED [ 36%]
07:14:45 test/integration/test_admin.py::TestAdmin::testChangePasswordWhenUnset FAILED [ 38%]
07:14:48 test/integration/test_admin.py::TestAdmin::test9193 FAILED [ 41%]
07:14:51 test/integration/test_files.py::TestFiles::testUploadDifferentSizeTicket2337 FAILED [ 44%]
07:14:56 test/integration/test_ishare.py::TestIShare::test1172 FAILED [ 47%]
07:15:00 test/integration/test_itimeline.py::TestITimeline::test1225 FAILED [ 50%]
07:15:03 test/integration/test_permissions.py::TestPermissions::test3136 FAILED [ 52%]
07:15:05 test/integration/test_permissions.py::TestPermissions::testSaveWithNegOneExplicit FAILED [ 55%]
07:15:08 test/integration/test_permissions.py::TestPermissions::testSaveWithNegBadLink FAILED [ 58%]
07:15:10 test/integration/test_permissions.py::TestPermissions::testSaveBadLink FAILED [ 61%]
07:15:13 test/integration/test_permissions.py::TestPermissions::testUseOfRawFileBeanScriptReadCorrectGroupAndUser FAILED [ 63%]
07:15:16 test/integration/test_rawfilestore.py::TestRFS::testTicket1961Basic FAILED [ 66%]
07:15:16 test/integration/test_rawfilestore.py::TestRFS::testTicket1961WithKillSession FAILED [ 69%]
07:15:16 test/integration/test_rawfilestore.py::TestRFS::testTicket2161Save FAILED [ 72%]
07:15:21 test/integration/test_rawfilestore.py::TestRFS::testNoWrite FAILED [ 75%]
07:15:24 test/integration/test_reporawfilestore.py::TestRepoRawFileStore::testFailedWriteNoFile FAILED [ 77%]
07:15:37 test/integration/test_scripts.py::TestScripts::testParseErrorTicket2185 PASSED [ 80%]
07:15:53 test/integration/test_scripts.py::TestScripts::testAutoFillTicket2326 FAILED [ 83%]
07:15:56 test/integration/test_scripts.py::TestScripts::testParamLoadingPerformanceTicket2285 FAILED [ 86%]
07:16:11 test/integration/test_scripts.py::TestScripts::test3527 FAILED [ 88%]
07:16:17 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testPrivate10618RootWithNoCtx FAILED [ 91%]
07:16:37 test/integration/test_tickets2000.py::TestTickets2000::test1184 FAILED [ 94%]
07:16:49 test/integration/test_tickets4000.py::TestTickets4000::test3138 PASSED [ 97%]
07:16:54 test/integration/test_tickets6000.py::TestTickets6000::test5684 PASSED [100%]
07:16:54 =================================== FAILURES ===================================
07:16:54 __________________________ TestFS.testRenameAdminOnly __________________________
07:16:54 self = <test.integration.clitest.test_fs.TestFS object at 0x7ff3a899e220>
07:16:54 capsys = <_pytest.capture.CaptureFixture object at 0x7ff374dd85e0>
07:16:54 @pytest.mark.broken(reason="fs rename is temporarily disabled")
07:16:54 def testRenameAdminOnly(self, capsys):
07:16:54 """Test fs rename is admin-only"""
07:16:54 self.args += ["rename", "Fileset:1"]
07:16:54 with pytest.raises(NonZeroReturnCode):
07:16:54 self.cli.invoke(self.args, strict=True)
07:16:54 out, err = capsys.readouterr()
07:16:54 > assert err.endswith("SecurityViolation: Admins only!\n")
07:16:54 E AssertionError: assert False
07:16:54 E + where False = <built-in method endswith of str object at 0x7ff374dc5260>('SecurityViolation: Admins only!\n')
07:16:54 E + where <built-in method endswith of str object at 0x7ff374dc5260> = 'disabled since OMERO 5.4.7 due to Pixels.path bug\n'.endswith
07:16:54 test/integration/clitest/test_fs.py:118: AssertionError
07:16:54 _________ TestImport.testTargetInDifferentGroup[Dataset-test.fake--d] __________
07:16:54 self = <test.integration.clitest.test_import.TestImport object at 0x7ff3a8774880>
07:16:54 container = 'Dataset', filename = 'test.fake', arg = '-d'
07:16:54 tmpdir = local('/tmp/pytest-of-omero/pytest-29/testTargetInDifferentGroup_Dat0')
07:16:54 capfd = <_pytest.capture.CaptureFixture object at 0x7ff374712130>
07:16:54 @pytest.mark.broken(reason="needs omero.group setting")
07:16:54 @pytest.mark.parametrize("container,filename,arg", target_fixtures)
07:16:54 def testTargetInDifferentGroup(self, container, filename, arg,
07:16:54 tmpdir, capfd):
07:16:54 new_group = self.new_group(experimenters=[self.user])
07:16:54 self.sf.getAdminService().getEventContext() # Refresh
07:16:54 target = eval("omero.model."+container+"I")()
07:16:54 target.name = rstring('testTargetInDifferentGroup')
07:16:54 target = self.update.saveAndReturnObject(
07:16:54 target, {"omero.group": str(new_group.id.val)})
07:16:54 assert target.details.group.id.val == new_group.id.val
07:16:54 fakefile = tmpdir.join(filename)
07:16:54 fakefile.write('')
07:16:54 self.args += [str(fakefile)]
07:16:54 self.args += [arg, '%s' % target.id.val]
07:16:54 # Invoke CLI import command and retrieve stdout/stderr
07:16:54 > o, e = self.do_import(capfd)
07:16:54 test/integration/clitest/test_import.py:1216:
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 test/integration/clitest/test_import.py:150: in do_import
07:16:54 self.cli.invoke(self.args, strict=True)
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/omero/cli.py:1211: in invoke
07:16:54 self.assertRC()
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 self = <omero.cli.CLI object at 0x7ff368224dc0>
07:16:54 def assertRC(self):
07:16:54 if self.rv != 0:
07:16:54 > raise NonZeroReturnCode(self.rv, "assert failed")
07:16:54 E omero.cli.NonZeroReturnCode: assert failed
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/omero/cli.py:1200: NonZeroReturnCode
07:16:54 ----------------------------- Captured stdout call -----------------------------
07:16:54 OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOO
07:16:54 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
07:16:54 2024-10-27 07:13:28,963 256 [ main] INFO ome.formats.importer.ImportConfig - OMERO.blitz Version: 5.7.5-SNAPSHOT
07:16:54 2024-10-27 07:13:28,978 271 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 8.1.0-SNAPSHOT revision: 583016a8fb5118d0c2defeb87b80b78575f72f4f date: 27 October 2024
07:16:54 2024-10-27 07:13:29,029 322 [ main] INFO formats.importer.cli.CommandLineImporter - Log levels -- Bio-Formats: ERROR OMERO.importer: INFO
07:16:54 2024-10-27 07:13:29,343 636 [ main] INFO ome.formats.importer.ImportCandidates - Depth: 4 Metadata Level: MINIMUM
07:16:54 2024-10-27 07:13:29,409 702 [ main] INFO ome.formats.importer.ImportCandidates - 1 file(s) parsed into 1 group(s) with 1 call(s) to setId in 64ms. (66ms total) [0 unknowns]
07:16:54 2024-10-27 07:13:29,444 737 [ main] INFO ome.formats.OMEROMetadataStoreClient - Attempting initial SSL connection to localhost:14064
07:16:54 2024-10-27 07:13:29,807 1100 [ main] INFO ome.formats.OMEROMetadataStoreClient - Insecure connection requested, falling back
07:16:54 2024-10-27 07:13:30,010 1303 [ main] INFO ome.formats.OMEROMetadataStoreClient - Pinging session every 300s.
07:16:54 2024-10-27 07:13:30,016 1309 [ main] INFO ome.formats.OMEROMetadataStoreClient - Server: 5.6.3
07:16:54 2024-10-27 07:13:30,016 1309 [ main] INFO ome.formats.OMEROMetadataStoreClient - Client: 5.7.5-SNAPSHOT
07:16:54 2024-10-27 07:13:30,016 1309 [ main] INFO ome.formats.OMEROMetadataStoreClient - Java Version: 11.0.24
07:16:54 2024-10-27 07:13:30,016 1309 [ main] INFO ome.formats.OMEROMetadataStoreClient - OS Name: Linux
07:16:54 2024-10-27 07:13:30,016 1309 [ main] INFO ome.formats.OMEROMetadataStoreClient - OS Arch: amd64
07:16:54 2024-10-27 07:13:30,016 1309 [ main] INFO ome.formats.OMEROMetadataStoreClient - OS Version: 5.14.0-427.40.1.el9_4.x86_64
07:16:54 2024-10-27 07:13:40,099 11392 [ main] ERROR ome.system.UpgradeCheck - Error reading from url: http://upgrade.openmicroscopy.org.uk?version=5.7.5-SNAPSHOT;os.name=Linux;os.arch=amd64;os.version=5.14.0-427.40.1.el9_4.x86_64;java.runtime.version=11.0.24%2B8-LTS;java.vm.vendor=Red+Hat%2C+Inc. "connect timed out"
07:16:54 2024-10-27 07:13:40,330 11623 [ main] INFO ome.formats.importer.ImportConfig - Using import target: Dataset:1346
07:16:54 2024-10-27 07:13:40,341 11634 [2-thread-1] ERROR ome.formats.importer.ImportLibrary - Could not load target: ome.formats.importer.targets.ModelImportTarget@381f19a8
07:16:54 2024-10-27 07:13:40,341 11634 [2-thread-1] ERROR ome.formats.importer.ImportLibrary - Error on import
07:16:54 java.lang.RuntimeException: Failed to load target
07:16:54 at ome.formats.importer.ImportLibrary$1.call(ImportLibrary.java:351)
07:16:54 at ome.formats.importer.ImportLibrary$1.call(ImportLibrary.java:328)
07:16:54 at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
07:16:54 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
07:16:54 at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
07:16:54 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
07:16:54 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 Caused by: omero.SecurityViolation: null
07:16:54 at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
07:16:54 at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
07:16:54 at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
07:16:54 at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:490)
07:16:54 at java.base/java.lang.Class.newInstance(Class.java:584)
07:16:54 at IceInternal.BasicStream.createUserException(BasicStream.java:2785)
07:16:54 at IceInternal.BasicStream.access$300(BasicStream.java:14)
07:16:54 at IceInternal.BasicStream$EncapsDecoder11.throwException(BasicStream.java:3620)
07:16:54 at IceInternal.BasicStream.throwException(BasicStream.java:2291)
07:16:54 at IceInternal.OutgoingAsync.throwUserException(OutgoingAsync.java:399)
07:16:54 at omero.api.IQueryPrxHelper.end_get(IQueryPrxHelper.java:2000)
07:16:54 at omero.api.IQueryPrxHelper.get(IQueryPrxHelper.java:1872)
07:16:54 at omero.api.IQueryPrxHelper.get(IQueryPrxHelper.java:1859)
07:16:54 at ome.formats.importer.targets.ModelImportTarget.load(ModelImportTarget.java:219)
07:16:54 at ome.formats.importer.ImportLibrary$1.call(ImportLibrary.java:334)
07:16:54 ... 7 common frames omitted
07:16:54 2024-10-27 07:13:40,343 11636 [2-thread-1] INFO ome.formats.importer.ImportLibrary - Exiting on error
07:16:54 ==> Summary
07:16:54 0 files uploaded, 0 filesets created, 0 images imported, 0 errors in 0:00:00.243
07:16:54 ------------------------------ Captured log call -------------------------------
07:16:54 INFO omero.util.Resources:__init__.py:652 Starting
07:16:54 INFO omero.util.Resources:__init__.py:669 Halted
07:16:54 _ TestImport.testTargetInDifferentGroup[Screen-SPW&plates=1&plateRows=1&plateCols=1&fields=1&plateAcqs=1.fake--r] _
07:16:54 self = <test.integration.clitest.test_import.TestImport object at 0x7ff3a8774a00>
07:16:54 container = 'Screen'
07:16:54 filename = 'SPW&plates=1&plateRows=1&plateCols=1&fields=1&plateAcqs=1.fake'
07:16:54 arg = '-r'
07:16:54 tmpdir = local('/tmp/pytest-of-omero/pytest-29/testTargetInDifferentGroup_Scr0')
07:16:54 capfd = <_pytest.capture.CaptureFixture object at 0x7ff37472b520>
07:16:54 @pytest.mark.broken(reason="needs omero.group setting")
07:16:54 @pytest.mark.parametrize("container,filename,arg", target_fixtures)
07:16:54 def testTargetInDifferentGroup(self, container, filename, arg,
07:16:54 tmpdir, capfd):
07:16:54 new_group = self.new_group(experimenters=[self.user])
07:16:54 self.sf.getAdminService().getEventContext() # Refresh
07:16:54 target = eval("omero.model."+container+"I")()
07:16:54 target.name = rstring('testTargetInDifferentGroup')
07:16:54 target = self.update.saveAndReturnObject(
07:16:54 target, {"omero.group": str(new_group.id.val)})
07:16:54 assert target.details.group.id.val == new_group.id.val
07:16:54 fakefile = tmpdir.join(filename)
07:16:54 fakefile.write('')
07:16:54 self.args += [str(fakefile)]
07:16:54 self.args += [arg, '%s' % target.id.val]
07:16:54 # Invoke CLI import command and retrieve stdout/stderr
07:16:54 > o, e = self.do_import(capfd)
07:16:54 test/integration/clitest/test_import.py:1216:
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 test/integration/clitest/test_import.py:150: in do_import
07:16:54 self.cli.invoke(self.args, strict=True)
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/omero/cli.py:1211: in invoke
07:16:54 self.assertRC()
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 self = <omero.cli.CLI object at 0x7ff368224dc0>
07:16:54 def assertRC(self):
07:16:54 if self.rv != 0:
07:16:54 > raise NonZeroReturnCode(self.rv, "assert failed")
07:16:54 E omero.cli.NonZeroReturnCode: assert failed
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/omero/cli.py:1200: NonZeroReturnCode
07:16:54 ----------------------------- Captured stdout call -----------------------------
07:16:54 OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOO
07:16:54 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
07:16:54 2024-10-27 07:13:41,111 243 [ main] INFO ome.formats.importer.ImportConfig - OMERO.blitz Version: 5.7.5-SNAPSHOT
07:16:54 2024-10-27 07:13:41,127 259 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 8.1.0-SNAPSHOT revision: 583016a8fb5118d0c2defeb87b80b78575f72f4f date: 27 October 2024
07:16:54 2024-10-27 07:13:41,175 307 [ main] INFO formats.importer.cli.CommandLineImporter - Log levels -- Bio-Formats: ERROR OMERO.importer: INFO
07:16:54 2024-10-27 07:13:41,484 616 [ main] INFO ome.formats.importer.ImportCandidates - Depth: 4 Metadata Level: MINIMUM
07:16:54 2024-10-27 07:13:41,689 821 [ main] INFO ome.formats.importer.ImportCandidates - 1 file(s) parsed into 1 group(s) with 1 call(s) to setId in 202ms. (204ms total) [0 unknowns]
07:16:54 2024-10-27 07:13:41,722 854 [ main] INFO ome.formats.OMEROMetadataStoreClient - Attempting initial SSL connection to localhost:14064
07:16:54 2024-10-27 07:13:42,085 1217 [ main] INFO ome.formats.OMEROMetadataStoreClient - Insecure connection requested, falling back
07:16:54 2024-10-27 07:13:42,287 1419 [ main] INFO ome.formats.OMEROMetadataStoreClient - Pinging session every 300s.
07:16:54 2024-10-27 07:13:42,292 1424 [ main] INFO ome.formats.OMEROMetadataStoreClient - Server: 5.6.3
07:16:54 2024-10-27 07:13:42,292 1424 [ main] INFO ome.formats.OMEROMetadataStoreClient - Client: 5.7.5-SNAPSHOT
07:16:54 2024-10-27 07:13:42,292 1424 [ main] INFO ome.formats.OMEROMetadataStoreClient - Java Version: 11.0.24
07:16:54 2024-10-27 07:13:42,292 1424 [ main] INFO ome.formats.OMEROMetadataStoreClient - OS Name: Linux
07:16:54 2024-10-27 07:13:42,292 1424 [ main] INFO ome.formats.OMEROMetadataStoreClient - OS Arch: amd64
07:16:54 2024-10-27 07:13:42,292 1424 [ main] INFO ome.formats.OMEROMetadataStoreClient - OS Version: 5.14.0-427.40.1.el9_4.x86_64
07:16:54 2024-10-27 07:13:52,369 11501 [ main] ERROR ome.system.UpgradeCheck - Error reading from url: http://upgrade.openmicroscopy.org.uk?version=5.7.5-SNAPSHOT;os.name=Linux;os.arch=amd64;os.version=5.14.0-427.40.1.el9_4.x86_64;java.runtime.version=11.0.24%2B8-LTS;java.vm.vendor=Red+Hat%2C+Inc. "connect timed out"
07:16:54 2024-10-27 07:13:52,606 11738 [ main] INFO ome.formats.importer.ImportConfig - Using import target: Screen:232
07:16:54 2024-10-27 07:13:52,618 11750 [2-thread-1] ERROR ome.formats.importer.ImportLibrary - Could not load target: ome.formats.importer.targets.ModelImportTarget@21e5a652
07:16:54 2024-10-27 07:13:52,618 11750 [2-thread-1] ERROR ome.formats.importer.ImportLibrary - Error on import
07:16:54 java.lang.RuntimeException: Failed to load target
07:16:54 at ome.formats.importer.ImportLibrary$1.call(ImportLibrary.java:351)
07:16:54 at ome.formats.importer.ImportLibrary$1.call(ImportLibrary.java:328)
07:16:54 at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
07:16:54 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
07:16:54 at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
07:16:54 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
07:16:54 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 Caused by: omero.SecurityViolation: null
07:16:54 at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
07:16:54 at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
07:16:54 at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
07:16:54 at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:490)
07:16:54 at java.base/java.lang.Class.newInstance(Class.java:584)
07:16:54 at IceInternal.BasicStream.createUserException(BasicStream.java:2785)
07:16:54 at IceInternal.BasicStream.access$300(BasicStream.java:14)
07:16:54 at IceInternal.BasicStream$EncapsDecoder11.throwException(BasicStream.java:3620)
07:16:54 at IceInternal.BasicStream.throwException(BasicStream.java:2291)
07:16:54 at IceInternal.OutgoingAsync.throwUserException(OutgoingAsync.java:399)
07:16:54 at omero.api.IQueryPrxHelper.end_get(IQueryPrxHelper.java:2000)
07:16:54 at omero.api.IQueryPrxHelper.get(IQueryPrxHelper.java:1872)
07:16:54 at omero.api.IQueryPrxHelper.get(IQueryPrxHelper.java:1859)
07:16:54 at ome.formats.importer.targets.ModelImportTarget.load(ModelImportTarget.java:219)
07:16:54 at ome.formats.importer.ImportLibrary$1.call(ImportLibrary.java:334)
07:16:54 ... 7 common frames omitted
07:16:54 2024-10-27 07:13:52,620 11752 [2-thread-1] INFO ome.formats.importer.ImportLibrary - Exiting on error
07:16:54 ==> Summary
07:16:54 0 files uploaded, 0 filesets created, 0 images imported, 0 errors in 0:00:00.251
07:16:54 ------------------------------ Captured log call -------------------------------
07:16:54 INFO omero.util.Resources:__init__.py:652 Starting
07:16:54 INFO omero.util.Resources:__init__.py:669 Halted
07:16:54 ________________________ TestHistory.testCreateHistory _________________________
07:16:54 self = <test.integration.gatewaytest.test_multi_group.TestHistory object at 0x7ff3a8324ee0>
07:16:54 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7ff3746f16d0>
07:16:54 @pytest.mark.broken(ticket="11494")
07:16:54 def testCreateHistory(self, gatewaywrapper):
07:16:54 # Login as user...
07:16:54 gatewaywrapper.doLogin(dbhelpers.USERS['history_test_user'])
07:16:54 userId = gatewaywrapper.gateway.getEventContext().userId
07:16:54 uuid = gatewaywrapper.gateway.getEventContext().sessionUuid
07:16:54 default_groupId = gatewaywrapper.gateway.getEventContext().groupId
07:16:54 start = int(round(time.time() * 1000)) - 1000
07:16:54 # Create Dataset in 'default' group
07:16:54 update = gatewaywrapper.gateway.getUpdateService()
07:16:54 new_ds = omero.model.DatasetI()
07:16:54 dataset_name = "history_test_%s" % uuid
07:16:54 new_ds.name = rstring(dataset_name)
07:16:54 new_ds = update.saveAndReturnObject(new_ds)
07:16:54 new_ds_Id = new_ds.id.val
07:16:54 # As Admin, create a second group with this user & upload script
07:16:54 gatewaywrapper.loginAsAdmin()
07:16:54 gid = gatewaywrapper.gateway.createGroup(
07:16:54 "history-test-%s" % uuid, member_Ids=[userId], perms=READWRITE)
07:16:54 # login as User
07:16:54 gatewaywrapper.doLogin(dbhelpers.USERS['history_test_user'])
07:16:54 end = int(round(time.time() * 1000)) + 1000
07:16:54 self.searchHistory(gatewaywrapper.gateway, start, end)
07:16:54 # switch user into new group
07:16:54 switched = gatewaywrapper.gateway.c.sf.setSecurityContext(
07:16:54 omero.model.ExperimenterGroupI(gid, False))
07:16:54 assert switched, "Failed to switch into new group"
07:16:54 # Shouldn't be able to access Dataset...
07:16:54 > self.searchHistory(gatewaywrapper.gateway, start, end)
07:16:54 test/integration/gatewaytest/test_multi_group.py:96:
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 self = <test.integration.gatewaytest.test_multi_group.TestHistory object at 0x7ff3a8324ee0>
07:16:54 gateway = <omero.gateway._BlitzGateway object at 0x7ff3725e5670>
07:16:54 start = 1730013232959, end = 1730013235106, dtype = 'Dataset'
07:16:54 def searchHistory(self, gateway, start, end, dtype="Dataset"):
07:16:54 tm = gateway.getTimelineService()
07:16:54 count = tm.countByPeriod([dtype], rtime(int(start)),
07:16:54 rtime(int(end)), None, gateway.SERVICE_OPTS)
07:16:54 data = tm.getByPeriod([dtype], rtime(int(start)), rtime(int(end)),
07:16:54 None, True, gateway.SERVICE_OPTS)
07:16:54 logs = tm.getEventLogsByPeriod(rtime(start), rtime(end), None,
07:16:54 gateway.SERVICE_OPTS)
07:16:54 entityType = 'ome.model.containers.%s' % dtype
07:16:54 filteredLogs = [{'id': i.entityId.val, 'action': i.action.val}
07:16:54 for i in logs if i.entityType.val == entityType]
07:16:54 typeCount = count[dtype]
07:16:54 dataCount = len(data[dtype])
07:16:54 logCount = len(filteredLogs)
07:16:54 assert typeCount == dataCount, \
07:16:54 "Period count should match number of objects"
07:16:54 > assert logCount == dataCount, \
07:16:54 "Logs count should match number of objects"
07:16:54 E AssertionError: Logs count should match number of objects
07:16:54 E assert 1 == 0
07:16:54 test/integration/gatewaytest/test_multi_group.py:58: AssertionError
07:16:54 ------------------------------ Captured log setup ------------------------------
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=50e5066f-64b5-4b8c-a6ef-219784a98fdb)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=49eafb59-85a3-4f1a-b8c9-1a9b0e04d001)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=ed839344-758e-419a-9c06-924a4c6c5a03)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=63a4dd7a-aadd-42f8-bd95-be7a0a04c318)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=e1716f3c-4a49-4459-80eb-b701d2e8f3ff)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=786f377f-1b57-447f-943f-2ea11a75d56c)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=e37ffab9-dd2e-4f43-a1d7-9d094d3e7a55)
07:16:54 WARNING omero.gateway:__init__.py:4810 ApiUsageException on <class 'omero.gateway.OmeroGatewaySafeCallWrapper'> to <543e19b0-79bf-486f-a633-5fd51eeb723aomero.api.IAdmin> lookupExperimenter(('history_test_user',), {})
07:16:54 Traceback (most recent call last):
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py", line 4830, in __call__
07:16:54 return self.f(*args, **kwargs)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IAdmin_ice.py", line 824, in lookupExperimenter
07:16:54 return _M_omero.api.IAdmin._op_lookupExperimenter.invoke(self, ((name, ), _ctx))
07:16:54 omero.ApiUsageException: exception ::omero::ApiUsageException
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.ApiUsageException: No such experimenter: history_test_user
07:16:54 at ome.logic.AdminImpl.lookupExperimenter(AdminImpl.java:325)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor639.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy98.lookupExperimenter(Unknown Source)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor639.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy98.lookupExperimenter(Unknown Source)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor3381.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
07:16:54 at ome.services.throttling.Callback.run(Callback.java:56)
07:16:54 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
07:16:54 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
07:16:54 at ome.services.blitz.impl.AdminI.lookupExperimenter_async(AdminI.java:256)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor3380.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy99.lookupExperimenter_async(Unknown Source)
07:16:54 at omero.api._IAdminTie.lookupExperimenter_async(_IAdminTie.java:264)
07:16:54 at omero.api._IAdminDisp.___lookupExperimenter(_IAdminDisp.java:924)
07:16:54 at omero.api._IAdminDisp.__dispatch(_IAdminDisp.java:2345)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.ApiUsageException
07:16:54 message = No such experimenter: history_test_user
07:16:54 }
07:16:54 WARNING omero.gateway:__init__.py:4810 ApiUsageException on <class 'omero.gateway.OmeroGatewaySafeCallWrapper'> to <543e19b0-79bf-486f-a633-5fd51eeb723aomero.api.IAdmin> lookupGroup(('rw_history',), {})
07:16:54 Traceback (most recent call last):
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py", line 4830, in __call__
07:16:54 return self.f(*args, **kwargs)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IAdmin_ice.py", line 937, in lookupGroup
07:16:54 return _M_omero.api.IAdmin._op_lookupGroup.invoke(self, ((name, ), _ctx))
07:16:54 omero.ApiUsageException: exception ::omero::ApiUsageException
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.ApiUsageException: No such group: rw_history
07:16:54 at ome.logic.AdminImpl.lookupGroup(AdminImpl.java:366)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor571.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy98.lookupGroup(Unknown Source)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor571.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy98.lookupGroup(Unknown Source)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor602.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
07:16:54 at ome.services.throttling.Callback.run(Callback.java:56)
07:16:54 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
07:16:54 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
07:16:54 at ome.services.blitz.impl.AdminI.lookupGroup_async(AdminI.java:266)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor601.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy99.lookupGroup_async(Unknown Source)
07:16:54 at omero.api._IAdminTie.lookupGroup_async(_IAdminTie.java:276)
07:16:54 at omero.api._IAdminDisp.___lookupGroup(_IAdminDisp.java:990)
07:16:54 at omero.api._IAdminDisp.__dispatch(_IAdminDisp.java:2353)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.ApiUsageException
07:16:54 message = No such group: rw_history
07:16:54 }
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 ------------------------------ Captured log call -------------------------------
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=31718f62-9b3d-4858-bc2d-ce07fd2bf457)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=94c88d99-91d0-45bf-a141-3e55b0bd7651)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=8b7996b6-67a8-4f05-a12f-b82baac1c529)
07:16:54 --------------------------- Captured stderr teardown ---------------------------
07:16:54 **
07:16:54 ---------------------------- Captured log teardown -----------------------------
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=ae3b9dea-bcc7-49ed-8683-f8057216cbc1)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=f1b0c476-927b-444c-b56d-34cf8b2639fb)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=1d97ead3-df9b-43b1-9e2b-2c89edf8917d)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 ___________________________ TestScript.testRunScript ___________________________
07:16:54 self = <test.integration.gatewaytest.test_multi_group.TestScript object at 0x7ff3a832ee50>
07:16:54 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7ff3725c9250>
07:16:54 @pytest.mark.broken(ticket="11610")
07:16:54 def testRunScript(self, gatewaywrapper):
07:16:54 # Login as user...
07:16:54 gatewaywrapper.doLogin(dbhelpers.USERS['script_test_user'])
07:16:54 userId = gatewaywrapper.gateway.getEventContext().userId
07:16:54 uuid = gatewaywrapper.gateway.getEventContext().sessionUuid
07:16:54 default_groupId = gatewaywrapper.gateway.getEventContext().groupId
07:16:54 # Create Dataset in 'default' group
07:16:54 update = gatewaywrapper.gateway.getUpdateService()
07:16:54 new_ds = omero.model.DatasetI()
07:16:54 dataset_name = "script_test_%s" % uuid
07:16:54 new_ds.name = rstring(dataset_name)
07:16:54 new_ds = update.saveAndReturnObject(new_ds)
07:16:54 new_ds_Id = new_ds.id.val
07:16:54 # As Admin, create a second group with this user & upload script
07:16:54 gatewaywrapper.loginAsAdmin()
07:16:54 gid = gatewaywrapper.gateway.createGroup(
07:16:54 "script-test-%s" % uuid, member_Ids=[userId], perms=READWRITE)
07:16:54 SCRIPT = """if True:
07:16:54 import omero.scripts
07:16:54 import omero.rtypes
07:16:54 client = omero.scripts.client("ticket8573", \
07:16:54 omero.scripts.Long("datasetId"), \
07:16:54 omero.scripts.String("datasetName", out=True))
07:16:54 ec = client.sf.getAdminService().getEventContext()
07:16:54 gid = ec.groupId
07:16:54 qs = client.sf.getQueryService()
07:16:54 ds_Id = client.getInput("datasetId").getValue()
07:16:54 print("Running test...") # generate stdout
07:16:54 try:
07:16:54 dataset = qs.find("Dataset", ds_Id)
07:16:54 ds_Name = dataset.name.val
07:16:54 print(ds_Name)
07:16:54 except Exception:
07:16:54 ds_Name = "Not Found"
07:16:54 client.setOutput("gid", omero.rtypes.rlong(gid))
07:16:54 client.setOutput("datasetName", omero.rtypes.rstring(ds_Name))
07:16:54 """
07:16:54 svc = gatewaywrapper.gateway.getScriptService()
07:16:54 scriptID = svc.uploadOfficialScript(
07:16:54 "/test/ticket8573/%s" % uuid, SCRIPT)
07:16:54 # switch user into new group
07:16:54 gatewaywrapper.doLogin(dbhelpers.USERS['script_test_user'])
07:16:54 switched = gatewaywrapper.gateway.c.sf.setSecurityContext(
07:16:54 omero.model.ExperimenterGroupI(gid, False))
07:16:54 assert switched, "Failed to switch into new group"
07:16:54 # Shouldn't be able to access Dataset...
07:16:54 value = gatewaywrapper.gateway.getObject("Dataset", new_ds_Id)
07:16:54 assert value is None
07:16:54 gatewaywrapper.gateway.SERVICE_OPTS.setOmeroGroup(
07:16:54 str(default_groupId))
07:16:54 value = gatewaywrapper.gateway.getObject("Dataset", new_ds_Id)
07:16:54 assert value is not None
07:16:54 # run script
07:16:54 svc = gatewaywrapper.gateway.getScriptService()
07:16:54 > process = svc.runScript(scriptID, {"datasetId": rlong(new_ds_Id)},
07:16:54 None, gatewaywrapper.gateway.SERVICE_OPTS)
07:16:54 test/integration/gatewaytest/test_multi_group.py:188:
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py:4833: in __call__
07:16:54 return self.handle_exception(e, *args, **kwargs)
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py:4830: in __call__
07:16:54 return self.f(*args, **kwargs)
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 self = 80c2cac6-4060-48a8-93f2-cff5570ac5cd/bcf17a13-e517-42b3-9caf-e85b24b35f12omero.api.IScript -t -e 1.1:tcp -h 172.18.0.10 -p 45689 -t 60000
07:16:54 scriptID = 5946
07:16:54 inputs = {'datasetId': object #0 (::omero::RLong)
07:16:54 {
07:16:54 _val = 1354
07:16:54 }}
07:16:54 waitSecs = None
07:16:54 _ctx = <ServiceOptsDict: {'omero.client.uuid': 'bcf17a13-e517-42b3-9caf-e85b24b35f12', 'omero.session.uuid': '80c2cac6-4060-48a8-93f2-cff5570ac5cd', 'omero.group': '3660'}>
07:16:54 def runScript(self, scriptID, inputs, waitSecs, _ctx=None):
07:16:54 > return _M_omero.api.IScript._op_runScript.invoke(self, ((scriptID, inputs, waitSecs), _ctx))
07:16:54 E omero.NoProcessorAvailable: exception ::omero::NoProcessorAvailable
07:16:54 E {
07:16:54 E serverStackTrace =
07:16:54 E serverExceptionClass =
07:16:54 E message = No processor available! [0 response(s)]
07:16:54 E processorCount = 0
07:16:54 E }
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py:935: NoProcessorAvailable
07:16:54 ------------------------------ Captured log setup ------------------------------
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=0ead456c-f313-4ef8-878b-8a666f8f6340)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=3f1550ac-22be-45cc-8a6e-fcdc62859e2b)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=dd235ee2-f65f-4691-b75d-b15f17eb8265)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=0953c8b0-4f52-48c4-9ff7-174cf9a4164d)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=66869275-4ef9-4d2d-88f3-70c1b60426e1)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=551dc753-cb47-420a-9a06-7795f8e0fea5)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=a8bde125-8855-4dd1-be84-ad0b5ffe43d8)
07:16:54 WARNING omero.gateway:__init__.py:4810 ApiUsageException on <class 'omero.gateway.OmeroGatewaySafeCallWrapper'> to <3fc3f6f3-5810-4cb0-9551-198bd9c0f750omero.api.IAdmin> lookupExperimenter(('script_test_user',), {})
07:16:54 Traceback (most recent call last):
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py", line 4830, in __call__
07:16:54 return self.f(*args, **kwargs)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IAdmin_ice.py", line 824, in lookupExperimenter
07:16:54 return _M_omero.api.IAdmin._op_lookupExperimenter.invoke(self, ((name, ), _ctx))
07:16:54 omero.ApiUsageException: exception ::omero::ApiUsageException
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.ApiUsageException: No such experimenter: script_test_user
07:16:54 at ome.logic.AdminImpl.lookupExperimenter(AdminImpl.java:325)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor639.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy98.lookupExperimenter(Unknown Source)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor639.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy98.lookupExperimenter(Unknown Source)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor3381.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
07:16:54 at ome.services.throttling.Callback.run(Callback.java:56)
07:16:54 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
07:16:54 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
07:16:54 at ome.services.blitz.impl.AdminI.lookupExperimenter_async(AdminI.java:256)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor3380.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy99.lookupExperimenter_async(Unknown Source)
07:16:54 at omero.api._IAdminTie.lookupExperimenter_async(_IAdminTie.java:264)
07:16:54 at omero.api._IAdminDisp.___lookupExperimenter(_IAdminDisp.java:924)
07:16:54 at omero.api._IAdminDisp.__dispatch(_IAdminDisp.java:2345)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.ApiUsageException
07:16:54 message = No such experimenter: script_test_user
07:16:54 }
07:16:54 WARNING omero.gateway:__init__.py:4810 ApiUsageException on <class 'omero.gateway.OmeroGatewaySafeCallWrapper'> to <3fc3f6f3-5810-4cb0-9551-198bd9c0f750omero.api.IAdmin> lookupGroup(('rw_script',), {})
07:16:54 Traceback (most recent call last):
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py", line 4830, in __call__
07:16:54 return self.f(*args, **kwargs)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IAdmin_ice.py", line 937, in lookupGroup
07:16:54 return _M_omero.api.IAdmin._op_lookupGroup.invoke(self, ((name, ), _ctx))
07:16:54 omero.ApiUsageException: exception ::omero::ApiUsageException
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.ApiUsageException: No such group: rw_script
07:16:54 at ome.logic.AdminImpl.lookupGroup(AdminImpl.java:366)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor571.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy98.lookupGroup(Unknown Source)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor571.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy98.lookupGroup(Unknown Source)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor602.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
07:16:54 at ome.services.throttling.Callback.run(Callback.java:56)
07:16:54 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
07:16:54 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
07:16:54 at ome.services.blitz.impl.AdminI.lookupGroup_async(AdminI.java:266)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor601.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy99.lookupGroup_async(Unknown Source)
07:16:54 at omero.api._IAdminTie.lookupGroup_async(_IAdminTie.java:276)
07:16:54 at omero.api._IAdminDisp.___lookupGroup(_IAdminDisp.java:990)
07:16:54 at omero.api._IAdminDisp.__dispatch(_IAdminDisp.java:2353)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.ApiUsageException
07:16:54 message = No such group: rw_script
07:16:54 }
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 ------------------------------ Captured log call -------------------------------
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=fb9eeecd-8d34-46d7-90f3-ce3a54f9aa10)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=d17f010c-f16d-4a82-8273-c45e281e3119)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=80c2cac6-4060-48a8-93f2-cff5570ac5cd)
07:16:54 WARNING omero.gateway:__init__.py:4810 NoProcessorAvailable on <class 'omero.gateway.OmeroGatewaySafeCallWrapper'> to <bcf17a13-e517-42b3-9caf-e85b24b35f12omero.api.IScript> runScript((5946, {'datasetId': object #0 (::omero::RLong)
07:16:54 {
07:16:54 _val = 1354
07:16:54 }}, None, <ServiceOptsDict: {'omero.client.uuid': 'bcf17a13-e517-42b3-9caf-e85b24b35f12', 'omero.session.uuid': '80c2cac6-4060-48a8-93f2-cff5570ac5cd', 'omero.group': '3660'}>), {})
07:16:54 Traceback (most recent call last):
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py", line 4830, in __call__
07:16:54 return self.f(*args, **kwargs)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 935, in runScript
07:16:54 return _M_omero.api.IScript._op_runScript.invoke(self, ((scriptID, inputs, waitSecs), _ctx))
07:16:54 omero.NoProcessorAvailable: exception ::omero::NoProcessorAvailable
07:16:54 {
07:16:54 serverStackTrace =
07:16:54 serverExceptionClass =
07:16:54 message = No processor available! [0 response(s)]
07:16:54 processorCount = 0
07:16:54 }
07:16:54 --------------------------- Captured stderr teardown ---------------------------
07:16:54 **
07:16:54 ---------------------------- Captured log teardown -----------------------------
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=bc476979-781b-433a-b268-3dd2425043dc)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=51a81744-6411-4214-849b-6f70e996de75)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=581c77a2-b05e-4f56-8c7c-d65e3ffeeb90)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 ___________________ TestPerformance.testListFileAnnotations ____________________
07:16:54 self = <test.integration.gatewaytest.test_performance.TestPerformance object at 0x7ff3a8336550>
07:16:54 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7ff3724abb50>
07:16:54 @pytest.mark.broken(ticket="11494")
07:16:54 def testListFileAnnotations(self, gatewaywrapper):
07:16:54 """
07:16:54 testListFileAnnotations: test speed of getObjects('FileAnnotation') vv
07:16:54 listFileAnnotations()
07:16:54 """
07:16:54 gatewaywrapper.loginAsAuthor()
07:16:54 updateService = gatewaywrapper.gateway.getUpdateService()
07:16:54 def createFileAnnotation(name, ns):
07:16:54 originalFile = omero.model.OriginalFileI()
07:16:54 originalFile.setName(rstring(name))
07:16:54 originalFile.setPath(rstring(name))
07:16:54 originalFile.setSize(rlong(0))
07:16:54 originalFile.setHash(rstring("Foo"))
07:16:54 originalFile = updateService.saveAndReturnObject(originalFile)
07:16:54 fa = omero.model.FileAnnotationI()
07:16:54 fa.setFile(originalFile)
07:16:54 fa.setNs(rstring(ns))
07:16:54 fa = updateService.saveAndReturnObject(fa)
07:16:54 return fa.id.val
07:16:54 ns = "omero.gatewaytest.PerformanceTest.testListFileAnnotations"
07:16:54 fileCount = 250
07:16:54 fileAnnIds = [createFileAnnotation("testListFileAnnotations%s" % i,
07:16:54 ns) for i in range(fileCount)]
07:16:54 # test speed of listFileAnnotations
07:16:54 startTime = time.time()
07:16:54 fileCount = 0
07:16:54 fileAnns = gatewaywrapper.gateway.listFileAnnotations(toInclude=[ns])
07:16:54 for fa in fileAnns:
07:16:54 fa.getFileName()
07:16:54 fileCount += 1
07:16:54 t1 = time.time() - startTime
07:16:54 print("listFileAnnotations for %d files = %s secs" % (fileCount, t1))
07:16:54 # Typically 1.4 secs
07:16:54 # test speed of getOjbects("Annotation") - lazy loading file names
07:16:54 startTime = time.time()
07:16:54 fileCount = 0
07:16:54 fileAnns = gatewaywrapper.gateway.getObjects(
07:16:54 "FileAnnotation", attributes={'ns': ns})
07:16:54 for fa in fileAnns:
07:16:54 fa.getFileName()
07:16:54 fileCount += 1
07:16:54 t2 = time.time() - startTime
07:16:54 print("getObjects, lazy loading file names for %d files = %s secs"
07:16:54 % (fileCount, t2)) # Typically 2.8 secs
07:16:54 # test speed of getOjbects("Annotation") - NO loading file names
07:16:54 startTime = time.time()
07:16:54 fileCount = 0
07:16:54 fileAnns = gatewaywrapper.gateway.getObjects(
07:16:54 "FileAnnotation", attributes={'ns': ns})
07:16:54 for fa in fileAnns:
07:16:54 fa.getId()
07:16:54 fileCount += 1
07:16:54 t3 = time.time() - startTime
07:16:54 print("getObjects, NO file names for %d files = %s secs"
07:16:54 % (fileCount, t3)) # Typically 0.4 secs
07:16:54 > assert t1 < t2, "Blitz listFileAnnotations() should be faster " \
07:16:54 "than getObjects('FileAnnotation')"
07:16:54 E AssertionError: Blitz listFileAnnotations() should be faster than getObjects('FileAnnotation')
07:16:54 E assert 0.2409670352935791 < 0.2193007469177246
07:16:54 test/integration/gatewaytest/test_performance.py:91: AssertionError
07:16:54 ------------------------------ Captured log setup ------------------------------
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=f49aa1e0-354a-48e5-b12f-95e491f29557)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=42685085-4154-4689-b473-ea8312c33b4d)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=3895c896-04ad-4a16-ba5d-07ceb1082362)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=cac81442-3786-47c0-b0fd-ccceb385aea5)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=91704a10-a085-4b4f-abdc-1007652733e5)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=a20a2b9c-78f2-45e2-add8-fcb269030173)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 ----------------------------- Captured stdout call -----------------------------
07:16:54 listFileAnnotations for 250 files = 0.2409670352935791 secs
07:16:54 getObjects, lazy loading file names for 250 files = 0.2193007469177246 secs
07:16:54 getObjects, NO file names for 250 files = 0.1493380069732666 secs
07:16:54 ------------------------------ Captured log call -------------------------------
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=7c94a8ea-7b32-4130-b176-8f90d13c70fc)
07:16:54 --------------------------- Captured stderr teardown ---------------------------
07:16:54 **
07:16:54 ---------------------------- Captured log teardown -----------------------------
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=d947f66c-e16e-42ec-a0f0-e118076b4f91)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=21c38b11-945f-4218-bb95-ac41088b82a6)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=8906876f-e71f-4ad7-b255-63f5b2122311)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 _________________________ TestUser.testCrossGroupRead __________________________
07:16:54 self = <test.integration.gatewaytest.test_user.TestUser object at 0x7ff3a830de50>
07:16:54 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7ff374dd8730>
07:16:54 @pytest.mark.broken(ticket="11545")
07:16:54 def testCrossGroupRead(self, gatewaywrapper):
07:16:54 gatewaywrapper.loginAsAuthor()
07:16:54 p = gatewaywrapper.getTestProject()
07:16:54 assert str(p.getDetails().permissions)[4] == '-'
07:16:54 d = p.getDetails()
07:16:54 g = d.getGroup()
07:16:54 gatewaywrapper.loginAsUser()
07:16:54 gatewaywrapper.gateway.SERVICE_OPTS.setOmeroGroup('-1')
07:16:54 > assert not g.getId() in \
07:16:54 gatewaywrapper.gateway.getEventContext().memberOfGroups
07:16:54 E assert not 2719 in [2718, 1, 2730, 2719, 2780]
07:16:54 E + where 2719 = getId()
07:16:54 E + where getId = <_ExperimenterGroupWrapper id=2719>.getId
07:16:54 E + and [2718, 1, 2730, 2719, 2780] = object #0 (::omero::sys::EventContext)\n{\n shareId = -1\n sessionId = 10312\n sessionUuid = 738e4abc-91b5-4074-9a9e-3a0260d55356\n userId = 3728\n userName = weblitz_test_user\n sudoerId = <nil>\n sudoerName = <nil>\n groupId = 2718\n groupName = weblitz_test_user_group\n isAdmin = False\n adminPrivileges = \n {\n }\n eventId = -1\n eventType = Internal\n memberOfGroups = \n {\n [0] = 2718\n [1] = 1\n [2] = 2730\n [3] = 2719\n [4] = 2780\n }\n leaderOfGroups = \n {\n }\n groupPermissions = object #1 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -56\n }\n}.memberOfGroups
07:16:54 E + where object #0 (::omero::sys::EventContext)\n{\n shareId = -1\n sessionId = 10312\n sessionUuid = 738e4abc-91b5-4074-9a9e-3a0260d55356\n userId = 3728\n userName = weblitz_test_user\n sudoerId = <nil>\n sudoerName = <nil>\n groupId = 2718\n groupName = weblitz_test_user_group\n isAdmin = False\n adminPrivileges = \n {\n }\n eventId = -1\n eventType = Internal\n memberOfGroups = \n {\n [0] = 2718\n [1] = 1\n [2] = 2730\n [3] = 2719\n [4] = 2780\n }\n leaderOfGroups = \n {\n }\n groupPermissions = object #1 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -56\n }\n} = getEventContext()
07:16:54 E + where getEventContext = <omero.gateway._BlitzGateway object at 0x7ff3a83ec1f0>.getEventContext
07:16:54 E + where <omero.gateway._BlitzGateway object at 0x7ff3a83ec1f0> = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7ff374dd8730>.gateway
07:16:54 test/integration/gatewaytest/test_user.py:127: AssertionError
07:16:54 ------------------------------ Captured log setup ------------------------------
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=1ecb39b5-417a-4bae-9558-992d1df85e02)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=5e857c9d-baaf-4f0c-ae29-b8e15f620d1e)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=0bd861cf-b9fb-44b2-9e47-a000b5e23321)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=197da083-e6cf-461d-9c96-b0bffca5812f)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=4f74af9d-8637-4b88-9562-9e3c160ad1b9)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=ee0e9de7-63ef-4650-a4af-a019cd766d1f)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 ------------------------------ Captured log call -------------------------------
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=10157d6c-d895-41ff-9376-cd81e259ee76)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=738e4abc-91b5-4074-9a9e-3a0260d55356)
07:16:54 --------------------------- Captured stderr teardown ---------------------------
07:16:54 **
07:16:54 ---------------------------- Captured log teardown -----------------------------
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=c07f3436-8422-44cd-ada1-438b01e07397)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=1718e770-553f-484f-874d-6d628e301090)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 INFO omero.gateway:__init__.py:2243 created connection (uuid=f96fe7c7-109a-4954-920b-a20d398642fb)
07:16:54 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None)
07:16:54 _________________________ TestPing.testProcessCallback _________________________
07:16:54 self = <test.integration.scriptstest.test_ping.TestPing object at 0x7ff3a8248280>
07:16:54 @pytest.mark.broken(ticket="11494")
07:16:54 def testProcessCallback(self):
07:16:54 callback = CallbackI()
07:16:54 id = self.client.getCommunicator().stringToIdentity(str(uuid.uuid4()))
07:16:54 cb = self.client.getAdapter().add(callback, id)
07:16:54 cb = omero.grid.ProcessCallbackPrx.uncheckedCast(cb)
07:16:54 p = self._getProcessor()
07:16:54 params = p.params()
07:16:54 assert params.stdoutFormat
07:16:54 process = p.execute(rmap({}))
07:16:54 process.registerCallback(cb)
07:16:54 self.assertSuccess(p, process)
07:16:54 > assert len(callback.finish) > 0
07:16:54 E assert 0 > 0
07:16:54 E + where 0 = len([])
07:16:54 E + where [] = object #0 (::omero::grid::ProcessCallback)\n{\n}.finish
07:16:54 test/integration/scriptstest/test_ping.py:214: AssertionError
07:16:54 ______________________ TestScriptRepo.testGetGroupScripts ______________________
07:16:54 self = <test.integration.scriptstest.test_repo.TestScriptRepo object at 0x7ff3a8250d60>
07:16:54 @pytest.mark.broken(ticket="11494")
07:16:54 def testGetGroupScripts(self):
07:16:54 scriptService = self.sf.getScriptService()
07:16:54 client = self.new_client(self.group)
07:16:54 sid = client.sf.getScriptService().uploadScript(
07:16:54 "/test/otheruser.py",
07:16:54 """if True:
07:16:54 import omero, omero.scripts as OS
07:16:54 OS.client("testGetGroupScripts")
07:16:54 """)
07:16:54 myGroupScripts = scriptService.getUserScripts(
07:16:54 [omero.model.ExperimenterGroupI(self.group.id.val, False)])
07:16:54 > assert sid in [x.id.val for x in myGroupScripts]
07:16:54 E assert 6202 in []
07:16:54 test/integration/scriptstest/test_repo.py:78: AssertionError
07:16:54 _____________________________ TestTables.test2098 ______________________________
07:16:54 self = <test_service.TestTables object at 0x7ff3a180f1f0>
07:16:54 @pytest.mark.broken(ticket="11534")
07:16:54 def test2098(self):
07:16:54 """
07:16:54 Creates and downloads an HDF file and checks
07:16:54 that its size and hash match whats in the db
07:16:54 """
07:16:54 grid = self.client.sf.sharedResources()
07:16:54 table = grid.newTable(1, "/test")
07:16:54 assert table
07:16:54 lc = columns.LongColumnI('lc', 'desc', [1])
07:16:54 file = None
07:16:54 try:
07:16:54 file = table.getOriginalFile()
07:16:54 assert file
07:16:54 table.initialize([lc])
07:16:54 table.addData([lc])
07:16:54 finally:
07:16:54 # Not deleting since queried
07:16:54 table.close()
07:16:54 # Reload the file
07:16:54 file = self.client.sf.getQueryService().get(
07:16:54 "OriginalFile", file.id.val)
07:16:54 # Check values
07:16:54 > p = path.path(self.tmpfile())
07:16:54 E AttributeError: type object 'path' has no attribute 'path'
07:16:54 test/integration/tablestest/test_service.py:154: AttributeError
07:16:54 _________________________ TestTables.testReadOnlyFile __________________________
07:16:54 self = <test_service.TestTables object at 0x7ff3a179c280>
07:16:54 @pytest.mark.broken(ticket="unimplemented")
07:16:54 def testReadOnlyFile(self):
07:16:54 """
07:16:54 Create an HDF5 file on the server, and then mark it read-only.
07:16:54 The server should still allow you to load & read that file.
07:16:54 """
07:16:54 self.testBlankTable() # ofile
07:16:54 > filename = self.unique_dir + "/file.txt"
07:16:54 E AttributeError: 'TestTables' object has no attribute 'unique_dir'
07:16:54 test/integration/tablestest/test_service.py:661: AttributeError
07:16:54 ___________________________ TestTables.testReadEqual ___________________________
07:16:54 self = <test_service.TestTables object at 0x7ff3a17a7460>
07:16:54 twoColumnFiveRowTable = 741e2fa7-4988-4839-93f4-a222a61e8f0e/Table-e54ff30d-4b14-439a-9823-0f1934f8ab17 -t -e 1.1:tcp -h 172.18.0.10 -p 45689 -t 60000
07:16:54 @pytest.mark.broken(reason="start=0,end=0 to be reviewed")
07:16:54 def testReadEqual(self, twoColumnFiveRowTable):
07:16:54 # start=0, end=0 has a special contract
07:16:54 data = twoColumnFiveRowTable.read([0], 0, 0)
07:16:54 assert 1 == len(data.columns)
07:16:54 > assert [1] == data.columns[0].values
07:16:54 E assert [1] == [1, 2, 3, 4, 5]
07:16:54 E
07:16:54 E Right contains 4 more items, first extra item: 2
07:16:54 E
07:16:54 E Full diff:
07:16:54 E [
07:16:54 E 1,
07:16:54 E - 2,
07:16:54 E - 3,
07:16:54 E - 4,
07:16:54 E - 5,
07:16:54 E ]
07:16:54 test/integration/tablestest/test_service.py:967: AssertionError
07:16:54 ________________________ TestTables.testReadOutOfRange _________________________
07:16:54 self = <test_service.TestTables object at 0x7ff3a17a7be0>
07:16:54 twoColumnFiveRowTable = 741e2fa7-4988-4839-93f4-a222a61e8f0e/Table-0594874f-3bac-435c-9452-b22586cb80b0 -t -e 1.1:tcp -h 172.18.0.10 -p 45689 -t 60000
07:16:54 @pytest.mark.broken(reason="need to be reviewed")
07:16:54 def testReadOutOfRange(self, twoColumnFiveRowTable):
07:16:54 # [1, 2, 3, 4, 5][-1:5] = [5]
07:16:54 data = twoColumnFiveRowTable.read([0], -1, 5)
07:16:54 assert 1 == len(data.columns)
07:16:54 assert [5] == data.columns[0].values
07:16:54 > assert [4] == data.rowNumbers
07:16:54 E assert [4] == [-1, 0, 1, 2, 3, 4]
07:16:54 E
07:16:54 E At index 0 diff: 4 != -1
07:16:54 E Right contains 5 more items, first extra item: 0
07:16:54 E
07:16:54 E Full diff:
07:16:54 E [
07:16:54 E - -1,
07:16:54 E - 0,
07:16:54 E - 1,
07:16:54 E - 2,
07:16:54 E - 3,
07:16:54 E 4,
07:16:54 E ]
07:16:54 test/integration/tablestest/test_service.py:1015: AssertionError
07:16:54 ____________________ TestAdmin.testChangePasswordWhenUnset _____________________
07:16:54 self = <test.integration.test_admin.TestAdmin object at 0x7ff3a17b9730>
07:16:54 @pytest.mark.broken(reason="Empty password disabled by config",
07:16:54 ticket="3201")
07:16:54 def testChangePasswordWhenUnset(self):
07:16:54 """
07:16:54 Shows that it's possible to use the
07:16:54 changePasswordWithOldPassword when
07:16:54 previously no password was set.
07:16:54 See ticket:3201
07:16:54 """
07:16:54 client = self.new_client()
07:16:54 admin = client.sf.getAdminService()
07:16:54 # By setting the user's password to the empty string
07:16:54 # any password will be allowed as the old password
07:16:54 admin.changePassword(rstring(""))
07:16:54 > admin.changePasswordWithOldPassword(rstring("IGNORED"), rstring("ome"))
07:16:54 test/integration/test_admin.py:118:
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 self = 3bf71627-ec26-497a-b197-bcbd5c4fb398/e9542b66-420e-4b4d-ba16-caf4fea2b631omero.api.IAdmin -t -e 1.1:tcp -h 172.18.0.10 -p 45689 -t 60000
07:16:54 oldPassword = object #0 (::omero::RString)
07:16:54 {
07:16:54 _val = IGNORED
07:16:54 }
07:16:54 newPassword = object #0 (::omero::RString)
07:16:54 {
07:16:54 _val = ome
07:16:54 }, _ctx = None
07:16:54 def changePasswordWithOldPassword(self, oldPassword, newPassword, _ctx=None):
07:16:54 > return _M_omero.api.IAdmin._op_changePasswordWithOldPassword.invoke(self, ((oldPassword, newPassword), _ctx))
07:16:54 E omero.SecurityViolation: exception ::omero::SecurityViolation
07:16:54 E {
07:16:54 E serverStackTrace = ome.conditions.SecurityViolation: Old password is invalid
07:16:54 E at ome.logic.AdminImpl.changePasswordWithOldPassword(AdminImpl.java:1253)
07:16:54 E at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
07:16:54 E at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 E at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 E at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 E at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 E at com.sun.proxy.$Proxy98.changePasswordWithOldPassword(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
07:16:54 E at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 E at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 E at com.sun.proxy.$Proxy98.changePasswordWithOldPassword(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
07:16:54 E at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
07:16:54 E at ome.services.throttling.Callback.run(Callback.java:56)
07:16:54 E at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
07:16:54 E at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
07:16:54 E at ome.services.blitz.impl.AdminI.changePasswordWithOldPassword_async(AdminI.java:144)
07:16:54 E at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
07:16:54 E at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 E at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 E at com.sun.proxy.$Proxy99.changePasswordWithOldPassword_async(Unknown Source)
07:16:54 E at omero.api._IAdminTie.changePasswordWithOldPassword_async(_IAdminTie.java:112)
07:16:54 E at omero.api._IAdminDisp.___changePasswordWithOldPassword(_IAdminDisp.java:1977)
07:16:54 E at omero.api._IAdminDisp.__dispatch(_IAdminDisp.java:2229)
07:16:54 E at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 E at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 E at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 E at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 E at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 E at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 E at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 E at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 E
07:16:54 E serverExceptionClass = ome.conditions.SecurityViolation
07:16:54 E message = Old password is invalid
07:16:54 E }
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/omero_api_IAdmin_ice.py:2460: SecurityViolation
07:16:54 ______________________________ TestAdmin.test9193 ______________________________
07:16:54 self = <test.integration.test_admin.TestAdmin object at 0x7ff3a17be670>
07:16:54 @pytest.mark.broken(reason="Is this test still valid?", ticket="11465")
07:16:54 def test9193(self):
07:16:54 # Test the removal of removing users
07:16:54 # from a group when the group in question
07:16:54 # may be their last (i.e. default) group
07:16:54 g = self.new_group()
07:16:54 u = self.new_user(group=g)
07:16:54 # Test removing the default group
07:16:54 > self.remove_experimenters(g, [u])
07:16:54 test/integration/test_admin.py:240:
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/omero/testlib/__init__.py:247: in remove_experimenters
07:16:54 admin.removeGroups(user, [group])
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 self = 399f5810-eea0-4aa2-a75b-0b8129b16685/09c6d492-e8ea-48f1-bbf2-b53aef2e02deomero.api.IAdmin -t -e 1.1:tcp -h 172.18.0.10 -p 45689 -t 60000
07:16:54 user = object #0 (::omero::model::Experimenter)
07:16:54 {
07:16:54 _id = object #1 (::omero::RLong)
07:16:54 {
07:16:54 _val = 4726
07:16:54 }
07:16:54 _d...annotationLinksSeq =
07:16:54 {
07:16:54 }
07:16:54 _annotationLinksLoaded = False
07:16:54 _annotationLinksCountPerOwner =
07:16:54 {
07:16:54 }
07:16:54 }
07:16:54 groups = [object #0 (::omero::model::ExperimenterGroup)
07:16:54 {
07:16:54 _id = object #1 (::omero::RLong)
07:16:54 {
07:16:54 _val = 3667
07:16:54 }
07:16:54 ...{
07:16:54 }
07:16:54 _annotationLinksLoaded = False
07:16:54 _annotationLinksCountPerOwner =
07:16:54 {
07:16:54 }
07:16:54 _description = <nil>
07:16:54 }]
07:16:54 _ctx = None
07:16:54 def removeGroups(self, user, groups, _ctx=None):
07:16:54 > return _M_omero.api.IAdmin._op_removeGroups.invoke(self, ((user, groups), _ctx))
07:16:54 E omero.ValidationException: exception ::omero::ValidationException
07:16:54 E {
07:16:54 E serverStackTrace = ome.conditions.ValidationException: experimenter cannot be a member of only the 'user' group, a different default group is also required
07:16:54 E at ome.logic.AdminImpl.removeGroups(AdminImpl.java:813)
07:16:54 E at jdk.internal.reflect.GeneratedMethodAccessor635.invoke(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 E at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 E at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 E at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 E at com.sun.proxy.$Proxy98.removeGroups(Unknown Source)
07:16:54 E at jdk.internal.reflect.GeneratedMethodAccessor635.invoke(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 E at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 E at com.sun.proxy.$Proxy98.removeGroups(Unknown Source)
07:16:54 E at jdk.internal.reflect.GeneratedMethodAccessor3278.invoke(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
07:16:54 E at ome.services.throttling.Callback.run(Callback.java:56)
07:16:54 E at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
07:16:54 E at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
07:16:54 E at ome.services.blitz.impl.AdminI.removeGroups_async(AdminI.java:318)
07:16:54 E at jdk.internal.reflect.GeneratedMethodAccessor3277.invoke(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 E at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 E at com.sun.proxy.$Proxy99.removeGroups_async(Unknown Source)
07:16:54 E at omero.api._IAdminTie.removeGroups_async(_IAdminTie.java:312)
07:16:54 E at omero.api._IAdminDisp.___removeGroups(_IAdminDisp.java:1621)
07:16:54 E at omero.api._IAdminDisp.__dispatch(_IAdminDisp.java:2377)
07:16:54 E at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 E at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 E at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 E at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 E at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 E at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 E at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 E at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 E
07:16:54 E serverExceptionClass = ome.conditions.ValidationException
07:16:54 E message = experimenter cannot be a member of only the 'user' group, a different default group is also required
07:16:54 E }
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/omero_api_IAdmin_ice.py:2011: ValidationException
07:16:54 _________________ TestFiles.testUploadDifferentSizeTicket2337 __________________
07:16:54 self = <test.integration.test_files.TestFiles object at 0x7ff3a1752b50>
07:16:54 @pytest.mark.broken(ticket="11610")
07:16:54 def testUploadDifferentSizeTicket2337(self):
07:16:54 uploaded = tmpfile()
07:16:54 ofile = self.client.upload(str(uploaded), type="text/plain")
07:16:54 uploaded.write_lines(["abc", "def"]) # Shorten
07:16:54 > ofile = self.client.upload(
07:16:54 str(uploaded), type="text/plain", ofile=ofile)
07:16:54 test/integration/test_files.py:62:
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/omero/clients.py:878: in upload
07:16:54 ofile = up.saveAndReturnObject(ofile)
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 self = ab1e7aa9-fcb5-48fa-a074-07f75563c2ce/f085b825-f44a-4fd8-94f4-ce6e880397feomero.api.IUpdate -t -e 1.1:tcp -h 172.18.0.10 -p 45689 -t 60000
07:16:54 obj = object #0 (::omero::model::OriginalFile)
07:16:54 {
07:16:54 _id = object #1 (::omero::RLong)
07:16:54 {
07:16:54 _val = 6207
07:16:54 }
07:16:54 _d...ksCountPerOwner =
07:16:54 {
07:16:54 }
07:16:54 _name = object #60 (::omero::RString)
07:16:54 {
07:16:54 _val = omerol4nfd8jh.tmp
07:16:54 }
07:16:54 }
07:16:54 _ctx = None
07:16:54 def saveAndReturnObject(self, obj, _ctx=None):
07:16:54 > return _M_omero.api.IUpdate._op_saveAndReturnObject.invoke(self, ((obj, ), _ctx))
07:16:54 E omero.OptimisticLockException: exception ::omero::OptimisticLockException
07:16:54 E {
07:16:54 E serverStackTrace = ome.conditions.OptimisticLockException: You are not authorized to change the update event for ome.model.core.OriginalFile:Id_6207 from ome.model.meta.Event:Id_124689 to ome.model.meta.Event:Id_124688
07:16:54 E You may need to reload the object before continuing.
07:16:54 E at ome.security.basic.OmeroInterceptor.managedEvent(OmeroInterceptor.java:1201)
07:16:54 E at ome.security.basic.OmeroInterceptor.checkManagedDetails(OmeroInterceptor.java:963)
07:16:54 E at ome.security.basic.OmeroInterceptor.resetDetails(OmeroInterceptor.java:465)
07:16:54 E at ome.security.basic.OmeroInterceptor.onFlushDirty(OmeroInterceptor.java:239)
07:16:54 E at org.hibernate.event.def.DefaultFlushEntityEventListener.invokeInterceptor(DefaultFlushEntityEventListener.java:372)
07:16:54 E at org.hibernate.event.def.DefaultFlushEntityEventListener.handleInterception(DefaultFlushEntityEventListener.java:349)
07:16:54 E at org.hibernate.event.def.DefaultFlushEntityEventListener.scheduleUpdate(DefaultFlushEntityEventListener.java:287)
07:16:54 E at org.hibernate.event.def.DefaultFlushEntityEventListener.onFlushEntity(DefaultFlushEntityEventListener.java:155)
07:16:54 E at org.hibernate.event.def.AbstractFlushingEventListener.flushEntities(AbstractFlushingEventListener.java:219)
07:16:54 E at org.hibernate.event.def.AbstractFlushingEventListener.flushEverythingToExecutions(AbstractFlushingEventListener.java:99)
07:16:54 E at org.hibernate.event.def.DefaultFlushEventListener.onFlush(DefaultFlushEventListener.java:50)
07:16:54 E at org.hibernate.impl.SessionImpl.flush(SessionImpl.java:1216)
07:16:54 E at ome.logic.UpdateImpl.afterUpdate(UpdateImpl.java:342)
07:16:54 E at ome.logic.UpdateImpl.doAction(UpdateImpl.java:358)
07:16:54 E at ome.logic.UpdateImpl.doAction(UpdateImpl.java:349)
07:16:54 E at ome.logic.UpdateImpl.saveAndReturnObject(UpdateImpl.java:135)
07:16:54 E at jdk.internal.reflect.GeneratedMethodAccessor614.invoke(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 E at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 E at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 E at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 E at com.sun.proxy.$Proxy100.saveAndReturnObject(Unknown Source)
07:16:54 E at jdk.internal.reflect.GeneratedMethodAccessor614.invoke(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 E at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 E at com.sun.proxy.$Proxy100.saveAndReturnObject(Unknown Source)
07:16:54 E at jdk.internal.reflect.GeneratedMethodAccessor692.invoke(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
07:16:54 E at ome.services.throttling.Callback.run(Callback.java:56)
07:16:54 E at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
07:16:54 E at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
07:16:54 E at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:62)
07:16:54 E at jdk.internal.reflect.GeneratedMethodAccessor691.invoke(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 E at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 E at com.sun.proxy.$Proxy101.saveAndReturnObject_async(Unknown Source)
07:16:54 E at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92)
07:16:54 E at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:229)
07:16:54 E at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:423)
07:16:54 E at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 E at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 E at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 E at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 E at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 E at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 E at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 E at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 E
07:16:54 E serverExceptionClass = ome.conditions.OptimisticLockException
07:16:54 E message = You are not authorized to change the update event for ome.model.core.OriginalFile:Id_6207 from ome.model.meta.Event:Id_124689 to ome.model.meta.Event:Id_124688
07:16:54 E You may need to reload the object before continuing.
07:16:54 E backOff = 0
07:16:54 E }
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/omero_api_IUpdate_ice.py:163: OptimisticLockException
07:16:54 _____________________________ TestIShare.test1172 ______________________________
07:16:54 self = <test.integration.test_ishare.TestIShare object at 0x7ff3a16ae3a0>
07:16:54 @pytest.mark.broken(reason="shares are image-centric for now")
07:16:54 def test1172(self):
07:16:54 uuid = self.root.sf.getAdminService().getEventContext().sessionUuid
07:16:54 share = self.root.sf.getShareService()
07:16:54 query = self.root.sf.getQueryService()
07:16:54 # create user
07:16:54 client_share1, user1 = self.new_client_and_user()
07:16:54 # create dataset with image
07:16:54 ds = self.make_dataset(name="dataset-%s" % uuid, client=self.root)
07:16:54 img = self.new_image(name='test-img in dataset-%s' % uuid)
07:16:54 self.link(ds, img, client=self.root)
07:16:54 items = list()
07:16:54 p = omero.sys.Parameters()
07:16:54 p.map = {"oid": ds.id}
07:16:54 sql = (
07:16:54 "select ds from Dataset ds "
07:16:54 "join fetch ds.details.owner "
07:16:54 "join fetch ds.details.group "
07:16:54 "left outer join fetch ds.imageLinks dil "
07:16:54 "left outer join fetch dil.child i "
07:16:54 "where ds.id=:oid")
07:16:54 items.extend(query.findAllByQuery(sql, p))
07:16:54 assert 1 == len(items)
07:16:54 # members
07:16:54 p.map["eid"] = rlong(user1.id.val)
07:16:54 sql = ("select e from Experimenter e "
07:16:54 "where e.id =:eid order by e.omeName")
07:16:54 ms = query.findAllByQuery(sql, p)
07:16:54 sid = share.createShare(("test-share-%s" % uuid),
07:16:54 rtime(int(time.time() * 1000 + 86400)),
07:16:54 items, ms, [], True)
07:16:54 # USER RETRIEVAL
07:16:54 # login as user1
07:16:54 share1 = client_share1.sf.getShareService()
07:16:54 query1 = client_share1.sf.getQueryService()
07:16:54 content = share1.getContents(sid)
07:16:54 # Content now contains just the dataset with nothing loaded
07:16:54 assert 1 == len(content)
07:16:54 # get shared dataset and image when share is activated
07:16:54 share1.activate(sid)
07:16:54 # retrieve dataset
07:16:54 p = omero.sys.Parameters()
07:16:54 p.map = {"ids": rlist([ds.id])}
07:16:54 sql = (
07:16:54 "select ds from Dataset ds "
07:16:54 "join fetch ds.details.owner "
07:16:54 "join fetch ds.details.group "
07:16:54 "left outer join fetch ds.imageLinks dil "
07:16:54 "left outer join fetch dil.child i "
07:16:54 "where ds.id in (:ids) order by ds.name")
07:16:54 try:
07:16:54 res1 = query1.findAllByQuery(sql, p)
07:16:54 assert False, "This should throw an exception"
07:16:54 except Exception:
07:16:54 pass
07:16:54 # Now we add all the other elements to the share to prevent
07:16:54 # the security violation
07:16:54 #
07:16:54 # Not working imgs = cntar.getImages("Dataset",[ds.id.val], None)
07:16:54 img = query.findByQuery(
07:16:54 "select i from Image i join fetch i.datasetLinks dil "
07:16:54 "join dil.parent d where d.id = %s " % ds.id.val, None)
07:16:54 assert img
07:16:54 share.addObject(sid, img)
07:16:54 share.addObjects(sid, img.copyDatasetLinks())
07:16:54 assert 3 == len(share.getContents(sid))
07:16:54 # And try again to load them
07:16:54 share1.activate(sid)
07:16:54 res1 = query1.findAllByQuery(sql, p)
07:16:54 > assert len(res1) == 1
07:16:54 E assert 0 == 1
07:16:54 E + where 0 = len([])
07:16:54 test/integration/test_ishare.py:381: AssertionError
07:16:54 ____________________________ TestITimeline.test1225 ____________________________
07:16:54 self = <test.integration.test_itimeline.TestITimeline object at 0x7ff3a16c49a0>
07:16:54 @pytest.mark.broken(ticket="1225")
07:16:54 def test1225(self):
07:16:54 uuid = self.root.sf.getAdminService().getEventContext().sessionUuid
07:16:54 update = self.root.sf.getUpdateService()
07:16:54 timeline = self.root.sf.getTimelineService()
07:16:54 query = self.root.sf.getQueryService()
07:16:54 # create dataset
07:16:54 to_save = list()
07:16:54 for i in range(0, 10):
07:16:54 to_save.append(self.new_dataset(name="ds-%i-%s" % (i, uuid)))
07:16:54 dss = update.saveAndReturnArray(to_save)
07:16:54 # create tag
07:16:54 for i in range(0, 10):
07:16:54 ds1 = query.get("Dataset", dss[i].id.val)
07:16:54 ann = omero.model.TagAnnotationI()
07:16:54 ann.textValue = rstring('tag-%i-%s' % (i, uuid))
07:16:54 ann.setDescription(rstring('desc-%i-%s' % (i, uuid)))
07:16:54 t_ann = omero.model.DatasetAnnotationLinkI()
07:16:54 t_ann.setParent(ds1)
07:16:54 t_ann.setChild(ann)
07:16:54 update.saveObject(t_ann)
07:16:54 p = omero.sys.Parameters()
07:16:54 p.map = {}
07:16:54 f = omero.sys.Filter()
07:16:54 f.ownerId = rlong(0)
07:16:54 f.limit = rint(10)
07:16:54 p.theFilter = f
07:16:54 M = timeline.getMostRecentAnnotationLinks
07:16:54 tagids = set([e.child.id.val for e in
07:16:54 M(None, ['TagAnnotation'], None, p)])
07:16:54 assert len(tagids) == 10
07:16:54 # And under #9609
07:16:54 tagids = set([e.child.id.val for e in
07:16:54 M(None, ['TagAnnotation'], None, p,
07:16:54 {"omero.group": "-1"})])
07:16:54 > assert len(tagids) == 10
07:16:54 E assert 6 == 10
07:16:54 E + where 6 = len({1908, 1944, 1995, 9450, 13072, 41480})
07:16:54 test/integration/test_itimeline.py:244: AssertionError
07:16:54 ___________________________ TestPermissions.test3136 ___________________________
07:16:54 self = <test.integration.test_permissions.TestPermissions object at 0x7ff3815328e0>
07:16:54 @pytest.mark.broken(ticket="11494")
07:16:54 def test3136(self):
07:16:54 """
07:16:54 Calls to updateGroup were taking too long
07:16:54 because the default value of permissions
07:16:54 returned by the server was triggering a
07:16:54 full changePermissions event.
07:16:54 """
07:16:54 admin = self.root.sf.getAdminService()
07:16:54 group = self.new_group(perms="rw----")
07:16:54 # Change the name but not the permissions
07:16:54 group.name = rstring(self.uuid())
07:16:54 elapsed1, rv = self.timeit(admin.updateGroup, group)
07:16:54 # Now change the name and the permissions
07:16:54 group.name = rstring(self.uuid())
07:16:54 group.details.permissions = omero.model.PermissionsI("rwr---")
07:16:54 elapsed2, rv = self.timeit(admin.updateGroup, group)
07:16:54 # Locally this test always fails as the two times are
07:16:54 # the same order of magnitude. This may be an indication that
07:16:54 # the relevant ticket:
07:16:54 # https://trac.openmicroscopy.org/ome/ticket/3136
07:16:54 # is still valid. Does the ticket need re-opening
07:16:54 # or does the test condition need relaxing?
07:16:54 > assert elapsed1 < (0.1 * elapsed2), \
07:16:54 "elapsed1=%s, elapsed2=%s" % (elapsed1, elapsed2)
07:16:54 E AssertionError: elapsed1=0.08193707466125488, elapsed2=0.014493942260742188
07:16:54 E assert 0.08193707466125488 < (0.1 * 0.014493942260742188)
07:16:54 test/integration/test_permissions.py:488: AssertionError
07:16:54 __________________ TestPermissions.testSaveWithNegOneExplicit __________________
07:16:54 self = <test.integration.test_permissions.TestPermissions object at 0x7ff381536fa0>
07:16:54 @pytest.mark.broken(ticket="11374")
07:16:54 def testSaveWithNegOneExplicit(self):
07:16:54 # Get a user and services
07:16:54 client, user = self.new_client_and_user()
07:16:54 # Create a new object with an explicit group
07:16:54 admin = client.sf.getAdminService()
07:16:54 ec = admin.getEventContext()
07:16:54 grp = omero.model.ExperimenterGroupI(ec.groupId, False)
07:16:54 tag = omero.model.TagAnnotationI()
07:16:54 tag.details.group = grp
07:16:54 # Now try to save it in the -1 context
07:16:54 update = client.sf.getUpdateService()
07:16:54 all_context = {"omero.group": "-1"}
07:16:54 > update.saveAndReturnObject(tag, all_context)
07:16:54 test/integration/test_permissions.py:586:
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 self = a5904a13-f7e7-4afb-854e-fb84d2c4b595/bde1f8b3-a36c-4f32-acd6-e7f82ff3d51eomero.api.IUpdate -t -e 1.1:tcp -h 172.18.0.10 -p 45689 -t 60000
07:16:54 obj = object #0 (::omero::model::TagAnnotation)
07:16:54 {
07:16:54 _id = <nil>
07:16:54 _details = object #1 (::omero::model::Details)
07:16:54 {
07:16:54 ...nksSeq =
07:16:54 {
07:16:54 }
07:16:54 _annotationLinksLoaded = True
07:16:54 _annotationLinksCountPerOwner = {}
07:16:54 _textValue = <nil>
07:16:54 }
07:16:54 _ctx = {'omero.group': '-1'}
07:16:54 def saveAndReturnObject(self, obj, _ctx=None):
07:16:54 > return _M_omero.api.IUpdate._op_saveAndReturnObject.invoke(self, ((obj, ), _ctx))
07:16:54 E omero.ApiUsageException: exception ::omero::ApiUsageException
07:16:54 E {
07:16:54 E serverStackTrace = ome.conditions.ApiUsageException: No valid permissions available! DUMMY permissions are not intended for copying. Make sure that you have not passed omero.group=-1 for a save without context
07:16:54 E at ome.model.internal.Permissions.<init>(Permissions.java:164)
07:16:54 E at ome.security.basic.CurrentDetails.createDetails(CurrentDetails.java:439)
07:16:54 E at ome.security.basic.OmeroInterceptor.newTransientDetails(OmeroInterceptor.java:700)
07:16:54 E at ome.security.basic.OmeroInterceptor.onSave(OmeroInterceptor.java:187)
07:16:54 E at org.hibernate.event.def.AbstractSaveEventListener.substituteValuesIfNecessary(AbstractSaveEventListener.java:413)
07:16:54 E at org.hibernate.event.def.AbstractSaveEventListener.performSaveOrReplicate(AbstractSaveEventListener.java:292)
07:16:54 E at org.hibernate.event.def.AbstractSaveEventListener.performSave(AbstractSaveEventListener.java:203)
07:16:54 E at org.hibernate.event.def.AbstractSaveEventListener.saveWithGeneratedId(AbstractSaveEventListener.java:143)
07:16:54 E at org.hibernate.event.def.DefaultMergeEventListener.saveTransientEntity(DefaultMergeEventListener.java:415)
07:16:54 E at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:341)
07:16:54 E at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303)
07:16:54 E at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62)
07:16:54 E at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154)
07:16:54 E at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258)
07:16:54 E at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87)
07:16:54 E at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:84)
07:16:54 E at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:73)
07:16:54 E at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:867)
07:16:54 E at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:851)
07:16:54 E at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:855)
07:16:54 E at ome.logic.UpdateImpl.internalMerge(UpdateImpl.java:313)
07:16:54 E at ome.logic.UpdateImpl$2.run(UpdateImpl.java:138)
07:16:54 E at ome.logic.UpdateImpl$2.run(UpdateImpl.java:135)
07:16:54 E at ome.logic.UpdateImpl.doAction(UpdateImpl.java:357)
07:16:54 E at ome.logic.UpdateImpl.doAction(UpdateImpl.java:349)
07:16:54 E at ome.logic.UpdateImpl.saveAndReturnObject(UpdateImpl.java:135)
07:16:54 E at jdk.internal.reflect.GeneratedMethodAccessor614.invoke(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 E at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 E at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 E at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 E at com.sun.proxy.$Proxy100.saveAndReturnObject(Unknown Source)
07:16:54 E at jdk.internal.reflect.GeneratedMethodAccessor614.invoke(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 E at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 E at com.sun.proxy.$Proxy100.saveAndReturnObject(Unknown Source)
07:16:54 E at jdk.internal.reflect.GeneratedMethodAccessor692.invoke(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
07:16:54 E at ome.services.throttling.Callback.run(Callback.java:56)
07:16:54 E at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
07:16:54 E at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
07:16:54 E at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:62)
07:16:54 E at jdk.internal.reflect.GeneratedMethodAccessor691.invoke(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 E at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 E at com.sun.proxy.$Proxy101.saveAndReturnObject_async(Unknown Source)
07:16:54 E at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92)
07:16:54 E at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:229)
07:16:54 E at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:423)
07:16:54 E at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 E at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 E at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 E at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 E at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 E at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 E at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 E at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 E
07:16:54 E serverExceptionClass = ome.conditions.ApiUsageException
07:16:54 E message = No valid permissions available! DUMMY permissions are not intended for copying. Make sure that you have not passed omero.group=-1 for a save without context
07:16:54 E }
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/omero_api_IUpdate_ice.py:163: ApiUsageException
07:16:54 ____________________ TestPermissions.testSaveWithNegBadLink ____________________
07:16:54 self = <test.integration.test_permissions.TestPermissions object at 0x7ff3815329d0>
07:16:54 @pytest.mark.broken(ticket="11374")
07:16:54 def testSaveWithNegBadLink(self): # ticket:8194
07:16:54 # Get a user and services
07:16:54 client, user = self.new_client_and_user()
07:16:54 admin = client.sf.getAdminService()
07:16:54 group1 = admin.getGroup(admin.getEventContext().groupId)
07:16:54 group2 = self.new_group(experimenters=[user])
07:16:54 for x in (group1, group2):
07:16:54 x.unload()
07:16:54 admin.getEventContext() # Refresh
07:16:54 # Create a new object with a bad link
07:16:54 image = self.new_image()
07:16:54 image.details.group = group1
07:16:54 tag = omero.model.TagAnnotationI()
07:16:54 tag.details.group = group2
07:16:54 link = image.linkAnnotation(tag)
07:16:54 link.details.group = group2
07:16:54 # Now try to save it in the -1 context
07:16:54 update = client.sf.getUpdateService()
07:16:54 all_context = {"omero.group": "-1"}
07:16:54 # Bad links should be detected and
07:16:54 # a security violation raised.
07:16:54 with pytest.raises(omero.GroupSecurityViolation):
07:16:54 > update.saveAndReturnObject(image, all_context)
07:16:54 test/integration/test_permissions.py:635:
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 self = 54038434-15aa-4c04-afdc-15f6f087427a/3f771b64-e390-4114-95d7-6d4d32dc31a5omero.api.IUpdate -t -e 1.1:tcp -h 172.18.0.10 -p 45689 -t 60000
07:16:54 obj = object #0 (::omero::model::Image)
07:16:54 {
07:16:54 _id = <nil>
07:16:54 _details = object #1 (::omero::model::Details)
07:16:54 {
07:16:54 _...458f71-2b7e-4504-b624-d01c76c56135
07:16:54 }
07:16:54 _description = object #14 (::omero::RString)
07:16:54 {
07:16:54 _val =
07:16:54 }
07:16:54 }
07:16:54 _ctx = {'omero.group': '-1'}
07:16:54 def saveAndReturnObject(self, obj, _ctx=None):
07:16:54 > return _M_omero.api.IUpdate._op_saveAndReturnObject.invoke(self, ((obj, ), _ctx))
07:16:54 E omero.ApiUsageException: exception ::omero::ApiUsageException
07:16:54 E {
07:16:54 E serverStackTrace = ome.conditions.ApiUsageException: No valid permissions available! DUMMY permissions are not intended for copying. Make sure that you have not passed omero.group=-1 for a save without context
07:16:54 E at ome.model.internal.Permissions.<init>(Permissions.java:164)
07:16:54 E at ome.security.basic.CurrentDetails.createDetails(CurrentDetails.java:439)
07:16:54 E at ome.security.basic.OmeroInterceptor.newTransientDetails(OmeroInterceptor.java:700)
07:16:54 E at ome.security.basic.OmeroInterceptor.onSave(OmeroInterceptor.java:187)
07:16:54 E at org.hibernate.event.def.AbstractSaveEventListener.substituteValuesIfNecessary(AbstractSaveEventListener.java:413)
07:16:54 E at org.hibernate.event.def.AbstractSaveEventListener.performSaveOrReplicate(AbstractSaveEventListener.java:292)
07:16:54 E at org.hibernate.event.def.AbstractSaveEventListener.performSave(AbstractSaveEventListener.java:203)
07:16:54 E at org.hibernate.event.def.AbstractSaveEventListener.saveWithGeneratedId(AbstractSaveEventListener.java:143)
07:16:54 E at org.hibernate.event.def.DefaultMergeEventListener.saveTransientEntity(DefaultMergeEventListener.java:415)
07:16:54 E at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:341)
07:16:54 E at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303)
07:16:54 E at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62)
07:16:54 E at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154)
07:16:54 E at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258)
07:16:54 E at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87)
07:16:54 E at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:84)
07:16:54 E at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:73)
07:16:54 E at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:867)
07:16:54 E at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:851)
07:16:54 E at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:855)
07:16:54 E at ome.logic.UpdateImpl.internalMerge(UpdateImpl.java:313)
07:16:54 E at ome.logic.UpdateImpl$2.run(UpdateImpl.java:138)
07:16:54 E at ome.logic.UpdateImpl$2.run(UpdateImpl.java:135)
07:16:54 E at ome.logic.UpdateImpl.doAction(UpdateImpl.java:357)
07:16:54 E at ome.logic.UpdateImpl.doAction(UpdateImpl.java:349)
07:16:54 E at ome.logic.UpdateImpl.saveAndReturnObject(UpdateImpl.java:135)
07:16:54 E at jdk.internal.reflect.GeneratedMethodAccessor614.invoke(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 E at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 E at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 E at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 E at com.sun.proxy.$Proxy100.saveAndReturnObject(Unknown Source)
07:16:54 E at jdk.internal.reflect.GeneratedMethodAccessor614.invoke(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 E at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 E at com.sun.proxy.$Proxy100.saveAndReturnObject(Unknown Source)
07:16:54 E at jdk.internal.reflect.GeneratedMethodAccessor692.invoke(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
07:16:54 E at ome.services.throttling.Callback.run(Callback.java:56)
07:16:54 E at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
07:16:54 E at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
07:16:54 E at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:62)
07:16:54 E at jdk.internal.reflect.GeneratedMethodAccessor691.invoke(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 E at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 E at com.sun.proxy.$Proxy101.saveAndReturnObject_async(Unknown Source)
07:16:54 E at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92)
07:16:54 E at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:229)
07:16:54 E at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:423)
07:16:54 E at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 E at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 E at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 E at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 E at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 E at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 E at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 E at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 E
07:16:54 E serverExceptionClass = ome.conditions.ApiUsageException
07:16:54 E message = No valid permissions available! DUMMY permissions are not intended for copying. Make sure that you have not passed omero.group=-1 for a save without context
07:16:54 E }
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/omero_api_IUpdate_ice.py:163: ApiUsageException
07:16:54 _______________________ TestPermissions.testSaveBadLink ________________________
07:16:54 self = <test.integration.test_permissions.TestPermissions object at 0x7ff3815a25b0>
07:16:54 @pytest.mark.broken(ticket="11375")
07:16:54 def testSaveBadLink(self):
07:16:54 # Get a user and services
07:16:54 client, user = self.new_client_and_user()
07:16:54 admin = client.sf.getAdminService()
07:16:54 group1 = admin.getGroup(admin.getEventContext().groupId)
07:16:54 group2 = self.new_group(experimenters=[user])
07:16:54 for x in (group1, group2):
07:16:54 x.unload()
07:16:54 admin.getEventContext() # Refresh
07:16:54 # Create a new object with a bad link
07:16:54 image = self.new_image()
07:16:54 image.details.group = group1
07:16:54 tag = omero.model.TagAnnotationI()
07:16:54 tag.details.group = group2
07:16:54 link = image.linkAnnotation(tag)
07:16:54 link.details.group = group2
07:16:54 # Now try to save it
07:16:54 update = client.sf.getUpdateService()
07:16:54 # Bad links should be detected and
07:16:54 # a security violation raised.
07:16:54 with pytest.raises(omero.GroupSecurityViolation):
07:16:54 > update.saveAndReturnObject(image)
07:16:54 test/integration/test_permissions.py:664:
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 self = 653bf8d2-7646-4910-84af-9c468aeee457/f9500e81-2b6d-46ed-b1ac-4d7c49248a6eomero.api.IUpdate -t -e 1.1:tcp -h 172.18.0.10 -p 45689 -t 60000
07:16:54 obj = object #0 (::omero::model::Image)
07:16:54 {
07:16:54 _id = <nil>
07:16:54 _details = object #1 (::omero::model::Details)
07:16:54 {
07:16:54 _...50f026-16b3-4bc7-9c03-f340c8d97e3f
07:16:54 }
07:16:54 _description = object #14 (::omero::RString)
07:16:54 {
07:16:54 _val =
07:16:54 }
07:16:54 }
07:16:54 _ctx = None
07:16:54 def saveAndReturnObject(self, obj, _ctx=None):
07:16:54 > return _M_omero.api.IUpdate._op_saveAndReturnObject.invoke(self, ((obj, ), _ctx))
07:16:54 E omero.SecurityViolation: exception ::omero::SecurityViolation
07:16:54 E {
07:16:54 E serverStackTrace = ome.conditions.SecurityViolation: You are not authorized to set the ExperimenterGroup for ome.model.annotations.TagAnnotation:Id_41635 to ome.model.meta.ExperimenterGroup:Id_3678
07:16:54 E at ome.security.basic.OmeroInterceptor.newTransientDetails(OmeroInterceptor.java:785)
07:16:54 E at ome.security.basic.OmeroInterceptor.onSave(OmeroInterceptor.java:187)
07:16:54 E at org.hibernate.event.def.AbstractSaveEventListener.substituteValuesIfNecessary(AbstractSaveEventListener.java:413)
07:16:54 E at org.hibernate.event.def.AbstractSaveEventListener.performSaveOrReplicate(AbstractSaveEventListener.java:292)
07:16:54 E at org.hibernate.event.def.AbstractSaveEventListener.performSave(AbstractSaveEventListener.java:203)
07:16:54 E at org.hibernate.event.def.AbstractSaveEventListener.saveWithGeneratedId(AbstractSaveEventListener.java:143)
07:16:54 E at org.hibernate.event.def.DefaultMergeEventListener.saveTransientEntity(DefaultMergeEventListener.java:415)
07:16:54 E at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:341)
07:16:54 E at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303)
07:16:54 E at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62)
07:16:54 E at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154)
07:16:54 E at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258)
07:16:54 E at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87)
07:16:54 E at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:877)
07:16:54 E at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:859)
07:16:54 E at org.hibernate.engine.CascadingAction$6.cascade(CascadingAction.java:279)
07:16:54 E at org.hibernate.engine.Cascade.cascadeToOne(Cascade.java:392)
07:16:54 E at org.hibernate.engine.Cascade.cascadeAssociation(Cascade.java:335)
07:16:54 E at org.hibernate.engine.Cascade.cascadeProperty(Cascade.java:204)
07:16:54 E at org.hibernate.engine.Cascade.cascade(Cascade.java:161)
07:16:54 E at org.hibernate.event.def.AbstractSaveEventListener.cascadeBeforeSave(AbstractSaveEventListener.java:450)
07:16:54 E at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:336)
07:16:54 E at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303)
07:16:54 E at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62)
07:16:54 E at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154)
07:16:54 E at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258)
07:16:54 E at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87)
07:16:54 E at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:877)
07:16:54 E at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:859)
07:16:54 E at org.hibernate.engine.CascadingAction$6.cascade(CascadingAction.java:279)
07:16:54 E at org.hibernate.engine.Cascade.cascadeToOne(Cascade.java:392)
07:16:54 E at org.hibernate.engine.Cascade.cascadeAssociation(Cascade.java:335)
07:16:54 E at org.hibernate.engine.Cascade.cascadeProperty(Cascade.java:204)
07:16:54 E at org.hibernate.engine.Cascade.cascadeCollectionElements(Cascade.java:425)
07:16:54 E at org.hibernate.engine.Cascade.cascadeCollection(Cascade.java:362)
07:16:54 E at org.hibernate.engine.Cascade.cascadeAssociation(Cascade.java:338)
07:16:54 E at org.hibernate.engine.Cascade.cascadeProperty(Cascade.java:204)
07:16:54 E at org.hibernate.engine.Cascade.cascade(Cascade.java:161)
07:16:54 E at org.hibernate.event.def.AbstractSaveEventListener.cascadeAfterSave(AbstractSaveEventListener.java:475)
07:16:54 E at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:388)
07:16:54 E at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303)
07:16:54 E at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62)
07:16:54 E at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154)
07:16:54 E at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258)
07:16:54 E at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87)
07:16:54 E at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:84)
07:16:54 E at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:73)
07:16:54 E at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:867)
07:16:54 E at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:851)
07:16:54 E at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:855)
07:16:54 E at ome.logic.UpdateImpl.internalMerge(UpdateImpl.java:313)
07:16:54 E at ome.logic.UpdateImpl$2.run(UpdateImpl.java:138)
07:16:54 E at ome.logic.UpdateImpl$2.run(UpdateImpl.java:135)
07:16:54 E at ome.logic.UpdateImpl.doAction(UpdateImpl.java:357)
07:16:54 E at ome.logic.UpdateImpl.doAction(UpdateImpl.java:349)
07:16:54 E at ome.logic.UpdateImpl.saveAndReturnObject(UpdateImpl.java:135)
07:16:54 E at jdk.internal.reflect.GeneratedMethodAccessor614.invoke(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 E at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 E at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 E at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 E at com.sun.proxy.$Proxy100.saveAndReturnObject(Unknown Source)
07:16:54 E at jdk.internal.reflect.GeneratedMethodAccessor614.invoke(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 E at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 E at com.sun.proxy.$Proxy100.saveAndReturnObject(Unknown Source)
07:16:54 E at jdk.internal.reflect.GeneratedMethodAccessor692.invoke(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
07:16:54 E at ome.services.throttling.Callback.run(Callback.java:56)
07:16:54 E at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
07:16:54 E at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
07:16:54 E at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:62)
07:16:54 E at jdk.internal.reflect.GeneratedMethodAccessor691.invoke(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 E at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 E at com.sun.proxy.$Proxy101.saveAndReturnObject_async(Unknown Source)
07:16:54 E at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92)
07:16:54 E at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:229)
07:16:54 E at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:423)
07:16:54 E at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 E at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 E at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 E at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 E at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 E at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 E at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 E at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 E
07:16:54 E serverExceptionClass = ome.conditions.SecurityViolation
07:16:54 E message = You are not authorized to set the ExperimenterGroup for ome.model.annotations.TagAnnotation:Id_41635 to ome.model.meta.ExperimenterGroup:Id_3678
07:16:54 E }
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/omero_api_IUpdate_ice.py:163: SecurityViolation
07:16:54 ______ TestPermissions.testUseOfRawFileBeanScriptReadCorrectGroupAndUser _______
07:16:54 self = <test.integration.test_permissions.TestPermissions object at 0x7ff38153f9a0>
07:16:54 @pytest.mark.broken(ticket="11539")
07:16:54 def testUseOfRawFileBeanScriptReadCorrectGroupAndUser(self):
07:16:54 > self.assertValidScript(lambda v: {
07:16:54 'omero.group': str(v.details.group.id.val),
07:16:54 'omero.user': str(v.details.owner.id.val)
07:16:54 })
07:16:54 test/integration/test_permissions.py:831:
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 test/integration/test_permissions.py:813: in assertValidScript
07:16:54 store.setFileId(script.id.val, ctx)
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 self = 57c2a5ed-1eda-4ecc-9576-52b85a45dcd8/04dbb695-0dac-4d9e-a1f9-3710c00145feomero.api.RawFileStore -t -e 1.1:tcp -h 172.18.0.10 -p 45689 -t 60000
07:16:54 fileId = 1
07:16:54 _ctx = {'omero.client.uuid': 'fb36e3fc-1976-4c74-8b8f-02586c0bc23f', 'omero.group': '1', 'omero.session.uuid': '57c2a5ed-1eda-4ecc-9576-52b85a45dcd8', 'omero.user': '0'}
07:16:54 def setFileId(self, fileId, _ctx=None):
07:16:54 > return _M_omero.api.RawFileStore._op_setFileId.invoke(self, ((fileId, ), _ctx))
07:16:54 E Ice.UnknownException: exception ::Ice::UnknownException
07:16:54 E {
07:16:54 E unknown = ome.conditions.SecurityViolation: User 4735 is not an admin and so cannot set uid to 0
07:16:54 E at ome.security.basic.BasicEventContext.checkAndInitialize(BasicEventContext.java:141)
07:16:54 E at ome.security.basic.CurrentDetails.checkAndInitialize(CurrentDetails.java:317)
07:16:54 E at ome.security.basic.BasicSecuritySystem.loadEventContext(BasicSecuritySystem.java:449)
07:16:54 E at ome.security.basic.EventHandler.doLogin(EventHandler.java:210)
07:16:54 E at ome.security.basic.EventHandler.invoke(EventHandler.java:146)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 E at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 E at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 E at com.sun.proxy.$Proxy74.doWork(Unknown Source)
07:16:54 E at ome.services.util.Executor$Impl.execute(Executor.java:447)
07:16:54 E at ome.services.blitz.repo.RepositoryDaoImpl.getFile(RepositoryDaoImpl.java:866)
07:16:54 E at ome.services.blitz.repo.PublicRepositoryI.checkId(PublicRepositoryI.java:823)
07:16:54 E at ome.services.blitz.repo.PublicRepositoryI.fileById(PublicRepositoryI.java:367)
07:16:54 E at omero.grid._RepositoryTie.fileById(_RepositoryTie.java:78)
07:16:54 E at omero.grid._RepositoryDisp.___fileById(_RepositoryDisp.java:393)
07:16:54 E at omero.grid._RepositoryDisp.__dispatch(_RepositoryDisp.java:538)
07:16:54 E at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 E at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 E at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 E at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 E at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 E at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 E at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 E at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 E
07:16:54 E }
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/omero_api_RawFileStore_ice.py:200: UnknownException
07:16:54 _________________________ TestRFS.testTicket1961Basic __________________________
07:16:54 self = <test.integration.test_rawfilestore.TestRFS object at 0x7ff3814fe2e0>
07:16:54 @pytest.mark.broken(ticket="11534")
07:16:54 def testTicket1961Basic(self):
07:16:54 ofile = self.file()
07:16:54 rfs = self.client.sf.createRawFileStore()
07:16:54 rfs.setFileId(ofile.id.val)
07:16:54 rfs.write([0, 1, 2, 3], 0, 4)
07:16:54 rfs.close()
07:16:54 > self.check_file(ofile)
07:16:54 test/integration/test_rawfilestore.py:49:
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 self = <test.integration.test_rawfilestore.TestRFS object at 0x7ff3814fe2e0>
07:16:54 ofile = object #0 (::omero::model::OriginalFile)
07:16:54 {
07:16:54 _id = object #1 (::omero::RLong)
07:16:54 {
07:16:54 _val = 6208
07:16:54 }
07:16:54 _d...annotationLinksCountPerOwner =
07:16:54 {
07:16:54 }
07:16:54 _name = object #26 (::omero::RString)
07:16:54 {
07:16:54 _val = test
07:16:54 }
07:16:54 }
07:16:54 client = <omero.clients.BaseClient object at 0x7ff36f8b0a60>
07:16:54 def check_file(self, ofile, client=None):
07:16:54 if client is None:
07:16:54 client = self.client
07:16:54 query = client.sf.getQueryService()
07:16:54 ofile = query.get("OriginalFile", ofile.id.val)
07:16:54 assert ofile.size.val != -1
07:16:54 > assert ofile.hash.val != ""
07:16:54 E AssertionError: assert '' != ''
07:16:54 E + where '' = object #0 (::omero::RString)\n{\n _val = \n}.val
07:16:54 E + where object #0 (::omero::RString)\n{\n _val = \n} = object #0 (::omero::model::OriginalFile)\n{\n _id = object #1 (::omero::RLong)\n {\n _val = 6208\n }\n _details = object #2 (::omero::model::Details)\n {\n _owner = object #3 (::omero::model::Experimenter)\n {\n _id = object #4 (::omero::RLong)\n {\n _val = 4736\n }\n _details = <nil>\n _loaded = False\n _version = <nil>\n _groupExperimenterMapSeq = \n {\n }\n _groupExperimenterMapLoaded = False\n _omeName = <nil>\n _firstName = <nil>\n _middleName = <nil>\n _lastName = <nil>\n _institution = <nil>\n _ldap = <nil>\n _email = <nil>\n _config = \n {\n }\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n }\n _group = object #5 (::omero::model::ExperimenterGroup)\n {\n _id = object #6 (::omero::RLong)\n {\n _val = 3680\n }\n _details = object #7 (::... }\n groupPermissions = object #20 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -120\n }\n }\n }\n _loaded = True\n _version = <nil>\n _pixelsFileMapsSeq = \n {\n }\n _pixelsFileMapsLoaded = False\n _pixelsFileMapsCountPerOwner = \n {\n }\n _path = object #21 (::omero::RString)\n {\n _val = /tmp/test\n }\n _repo = <nil>\n _size = object #22 (::omero::RLong)\n {\n _val = 4\n }\n _atime = <nil>\n _mtime = object #23 (::omero::RTime)\n {\n _val = 1730013316521\n }\n _ctime = <nil>\n _hasher = <nil>\n _hash = object #24 (::omero::RString)\n {\n _val = \n }\n _mimetype = object #25 (::omero::RString)\n {\n _val = application/octet-stream\n }\n _filesetEntriesSeq = \n {\n }\n _filesetEntriesLoaded = True\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n _name = object #26 (::omero::RString)\n {\n _val = test\n }\n}.hash
07:16:54 test/integration/test_rawfilestore.py:40: AssertionError
07:16:54 ____________________ TestRFS.testTicket1961WithKillSession _____________________
07:16:54 self = <test.integration.test_rawfilestore.TestRFS object at 0x7ff3814fe6a0>
07:16:54 @pytest.mark.broken(ticket="11534")
07:16:54 def testTicket1961WithKillSession(self):
07:16:54 ofile = self.file()
07:16:54 grp = self.ctx.groupName
07:16:54 session = self.client.sf.getSessionService().createUserSession(
07:16:54 1 * 1000, 10000, grp)
07:16:54 properties = self.client.getPropertyMap()
07:16:54 c = omero.client(properties)
07:16:54 s = c.joinSession(session.uuid.val)
07:16:54 rfs = s.createRawFileStore()
07:16:54 rfs.setFileId(ofile.id.val)
07:16:54 rfs.write([0, 1, 2, 3], 0, 4)
07:16:54 c.killSession()
07:16:54 > self.check_file(ofile)
07:16:54 test/integration/test_rawfilestore.py:67:
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 self = <test.integration.test_rawfilestore.TestRFS object at 0x7ff3814fe6a0>
07:16:54 ofile = object #0 (::omero::model::OriginalFile)
07:16:54 {
07:16:54 _id = object #1 (::omero::RLong)
07:16:54 {
07:16:54 _val = 6209
07:16:54 }
07:16:54 _d...annotationLinksCountPerOwner =
07:16:54 {
07:16:54 }
07:16:54 _name = object #26 (::omero::RString)
07:16:54 {
07:16:54 _val = test
07:16:54 }
07:16:54 }
07:16:54 client = <omero.clients.BaseClient object at 0x7ff36f8b0a60>
07:16:54 def check_file(self, ofile, client=None):
07:16:54 if client is None:
07:16:54 client = self.client
07:16:54 query = client.sf.getQueryService()
07:16:54 ofile = query.get("OriginalFile", ofile.id.val)
07:16:54 assert ofile.size.val != -1
07:16:54 > assert ofile.hash.val != ""
07:16:54 E AssertionError: assert '' != ''
07:16:54 E + where '' = object #0 (::omero::RString)\n{\n _val = \n}.val
07:16:54 E + where object #0 (::omero::RString)\n{\n _val = \n} = object #0 (::omero::model::OriginalFile)\n{\n _id = object #1 (::omero::RLong)\n {\n _val = 6209\n }\n _details = object #2 (::omero::model::Details)\n {\n _owner = object #3 (::omero::model::Experimenter)\n {\n _id = object #4 (::omero::RLong)\n {\n _val = 4736\n }\n _details = <nil>\n _loaded = False\n _version = <nil>\n _groupExperimenterMapSeq = \n {\n }\n _groupExperimenterMapLoaded = False\n _omeName = <nil>\n _firstName = <nil>\n _middleName = <nil>\n _lastName = <nil>\n _institution = <nil>\n _ldap = <nil>\n _email = <nil>\n _config = \n {\n }\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n }\n _group = object #5 (::omero::model::ExperimenterGroup)\n {\n _id = object #6 (::omero::RLong)\n {\n _val = 3680\n }\n _details = object #7 (::... }\n groupPermissions = object #20 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -120\n }\n }\n }\n _loaded = True\n _version = <nil>\n _pixelsFileMapsSeq = \n {\n }\n _pixelsFileMapsLoaded = False\n _pixelsFileMapsCountPerOwner = \n {\n }\n _path = object #21 (::omero::RString)\n {\n _val = /tmp/test\n }\n _repo = <nil>\n _size = object #22 (::omero::RLong)\n {\n _val = 4\n }\n _atime = <nil>\n _mtime = object #23 (::omero::RTime)\n {\n _val = 1730013316591\n }\n _ctime = <nil>\n _hasher = <nil>\n _hash = object #24 (::omero::RString)\n {\n _val = \n }\n _mimetype = object #25 (::omero::RString)\n {\n _val = application/octet-stream\n }\n _filesetEntriesSeq = \n {\n }\n _filesetEntriesLoaded = True\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n _name = object #26 (::omero::RString)\n {\n _val = test\n }\n}.hash
07:16:54 test/integration/test_rawfilestore.py:40: AssertionError
07:16:54 __________________________ TestRFS.testTicket2161Save __________________________
07:16:54 self = <test.integration.test_rawfilestore.TestRFS object at 0x7ff3814fea60>
07:16:54 @pytest.mark.broken(ticket="11534")
07:16:54 def testTicket2161Save(self):
07:16:54 ofile = self.file()
07:16:54 rfs = self.client.sf.createRawFileStore()
07:16:54 rfs.setFileId(ofile.id.val)
07:16:54 rfs.write([0, 1, 2, 3], 0, 4)
07:16:54 ofile = rfs.save()
07:16:54 > self.check_file(ofile)
07:16:54 test/integration/test_rawfilestore.py:76:
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 self = <test.integration.test_rawfilestore.TestRFS object at 0x7ff3814fea60>
07:16:54 ofile = object #0 (::omero::model::OriginalFile)
07:16:54 {
07:16:54 _id = object #1 (::omero::RLong)
07:16:54 {
07:16:54 _val = 6210
07:16:54 }
07:16:54 _d...annotationLinksCountPerOwner =
07:16:54 {
07:16:54 }
07:16:54 _name = object #26 (::omero::RString)
07:16:54 {
07:16:54 _val = test
07:16:54 }
07:16:54 }
07:16:54 client = <omero.clients.BaseClient object at 0x7ff36f8b0a60>
07:16:54 def check_file(self, ofile, client=None):
07:16:54 if client is None:
07:16:54 client = self.client
07:16:54 query = client.sf.getQueryService()
07:16:54 ofile = query.get("OriginalFile", ofile.id.val)
07:16:54 assert ofile.size.val != -1
07:16:54 > assert ofile.hash.val != ""
07:16:54 E AssertionError: assert '' != ''
07:16:54 E + where '' = object #0 (::omero::RString)\n{\n _val = \n}.val
07:16:54 E + where object #0 (::omero::RString)\n{\n _val = \n} = object #0 (::omero::model::OriginalFile)\n{\n _id = object #1 (::omero::RLong)\n {\n _val = 6210\n }\n _details = object #2 (::omero::model::Details)\n {\n _owner = object #3 (::omero::model::Experimenter)\n {\n _id = object #4 (::omero::RLong)\n {\n _val = 4736\n }\n _details = <nil>\n _loaded = False\n _version = <nil>\n _groupExperimenterMapSeq = \n {\n }\n _groupExperimenterMapLoaded = False\n _omeName = <nil>\n _firstName = <nil>\n _middleName = <nil>\n _lastName = <nil>\n _institution = <nil>\n _ldap = <nil>\n _email = <nil>\n _config = \n {\n }\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n }\n _group = object #5 (::omero::model::ExperimenterGroup)\n {\n _id = object #6 (::omero::RLong)\n {\n _val = 3680\n }\n _details = object #7 (::... }\n groupPermissions = object #20 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -120\n }\n }\n }\n _loaded = True\n _version = <nil>\n _pixelsFileMapsSeq = \n {\n }\n _pixelsFileMapsLoaded = False\n _pixelsFileMapsCountPerOwner = \n {\n }\n _path = object #21 (::omero::RString)\n {\n _val = /tmp/test\n }\n _repo = <nil>\n _size = object #22 (::omero::RLong)\n {\n _val = 4\n }\n _atime = <nil>\n _mtime = object #23 (::omero::RTime)\n {\n _val = 1730013316628\n }\n _ctime = <nil>\n _hasher = <nil>\n _hash = object #24 (::omero::RString)\n {\n _val = \n }\n _mimetype = object #25 (::omero::RString)\n {\n _val = application/octet-stream\n }\n _filesetEntriesSeq = \n {\n }\n _filesetEntriesLoaded = True\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n _name = object #26 (::omero::RString)\n {\n _val = test\n }\n}.hash
07:16:54 test/integration/test_rawfilestore.py:40: AssertionError
07:16:54 _____________________________ TestRFS.testNoWrite ______________________________
07:16:54 self = <test.integration.test_rawfilestore.TestRFS object at 0x7ff3814fee20>
07:16:54 @pytest.mark.broken(ticket="11534")
07:16:54 def testNoWrite(self):
07:16:54 group = self.new_group(perms="rwr---")
07:16:54 client1 = self.new_client(group=group)
07:16:54 client2 = self.new_client(group=group)
07:16:54 ofile = self.file(client=client1)
07:16:54 rfs = client1.sf.createRawFileStore()
07:16:54 rfs.setFileId(ofile.id.val)
07:16:54 rfs.write(b"0123", 0, 4)
07:16:54 rfs.close()
07:16:54 > self.check_file(ofile, client=client1)
07:16:54 test/integration/test_rawfilestore.py:94:
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 self = <test.integration.test_rawfilestore.TestRFS object at 0x7ff3814fee20>
07:16:54 ofile = object #0 (::omero::model::OriginalFile)
07:16:54 {
07:16:54 _id = object #1 (::omero::RLong)
07:16:54 {
07:16:54 _val = 6211
07:16:54 }
07:16:54 _d...annotationLinksCountPerOwner =
07:16:54 {
07:16:54 }
07:16:54 _name = object #26 (::omero::RString)
07:16:54 {
07:16:54 _val = test
07:16:54 }
07:16:54 }
07:16:54 client = <omero.clients.BaseClient object at 0x7ff36fdcf940>
07:16:54 def check_file(self, ofile, client=None):
07:16:54 if client is None:
07:16:54 client = self.client
07:16:54 query = client.sf.getQueryService()
07:16:54 ofile = query.get("OriginalFile", ofile.id.val)
07:16:54 assert ofile.size.val != -1
07:16:54 > assert ofile.hash.val != ""
07:16:54 E AssertionError: assert '' != ''
07:16:54 E + where '' = object #0 (::omero::RString)\n{\n _val = \n}.val
07:16:54 E + where object #0 (::omero::RString)\n{\n _val = \n} = object #0 (::omero::model::OriginalFile)\n{\n _id = object #1 (::omero::RLong)\n {\n _val = 6211\n }\n _details = object #2 (::omero::model::Details)\n {\n _owner = object #3 (::omero::model::Experimenter)\n {\n _id = object #4 (::omero::RLong)\n {\n _val = 4737\n }\n _details = <nil>\n _loaded = False\n _version = <nil>\n _groupExperimenterMapSeq = \n {\n }\n _groupExperimenterMapLoaded = False\n _omeName = <nil>\n _firstName = <nil>\n _middleName = <nil>\n _lastName = <nil>\n _institution = <nil>\n _ldap = <nil>\n _email = <nil>\n _config = \n {\n }\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n }\n _group = object #5 (::omero::model::ExperimenterGroup)\n {\n _id = object #6 (::omero::RLong)\n {\n _val = 3681\n }\n _details = object #7 (::... }\n groupPermissions = object #20 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -56\n }\n }\n }\n _loaded = True\n _version = <nil>\n _pixelsFileMapsSeq = \n {\n }\n _pixelsFileMapsLoaded = False\n _pixelsFileMapsCountPerOwner = \n {\n }\n _path = object #21 (::omero::RString)\n {\n _val = /tmp/test\n }\n _repo = <nil>\n _size = object #22 (::omero::RLong)\n {\n _val = 4\n }\n _atime = <nil>\n _mtime = object #23 (::omero::RTime)\n {\n _val = 1730013321764\n }\n _ctime = <nil>\n _hasher = <nil>\n _hash = object #24 (::omero::RString)\n {\n _val = \n }\n _mimetype = object #25 (::omero::RString)\n {\n _val = application/octet-stream\n }\n _filesetEntriesSeq = \n {\n }\n _filesetEntriesLoaded = True\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n _name = object #26 (::omero::RString)\n {\n _val = test\n }\n}.hash
07:16:54 test/integration/test_rawfilestore.py:40: AssertionError
07:16:54 __________________ TestRepoRawFileStore.testFailedWriteNoFile __________________
07:16:54 self = <test.integration.test_reporawfilestore.TestRepoRawFileStore object at 0x7ff3815272e0>
07:16:54 @pytest.mark.broken(ticket="11610")
07:16:54 def testFailedWriteNoFile(self):
07:16:54 # Without a single write, no file is produced
07:16:54 rfs = self.repoPrx.file(self.repo_filename, "rw") # create empty file
07:16:54 rfs.close()
07:16:54 rfs = self.repoPrx.file(self.repo_filename, "r")
07:16:54 with pytest.raises(omero.ResourceError):
07:16:54 > rfs.size()
07:16:54 E Failed: DID NOT RAISE <class 'omero.ResourceError'>
07:16:54 test/integration/test_reporawfilestore.py:68: Failed
07:16:54 ______________________ TestScripts.testAutoFillTicket2326 ______________________
07:16:54 self = <test.integration.test_scripts.TestScripts object at 0x7ff3814919d0>
07:16:54 @pytest.mark.broken(ticket="11539")
07:16:54 def testAutoFillTicket2326(self):
07:16:54 SCRIPT = """if True:
07:16:54 import omero.scripts
07:16:54 import omero.rtypes
07:16:54 client = omero.scripts.client(
07:16:54 "ticket2326", omero.scripts.Long("width", optional=True))
07:16:54 width = client.getInput("width")
07:16:54 print(width)
07:16:54 client.setOutput(
07:16:54 "noWidthKey",
07:16:54 omero.rtypes.rbool("width" not in client.getInputKeys()))
07:16:54 client.setOutput("widthIsNull", omero.rtypes.rbool(width is None))
07:16:54 """
07:16:54 impl = omero.processor.usermode_processor(self.client)
07:16:54 svc = self.client.sf.getScriptService()
07:16:54 try:
07:16:54 scriptID = svc.uploadScript("/test/testAutoFillTicket2326", SCRIPT)
07:16:54 > process = svc.runScript(scriptID, {}, None)
07:16:54 test/integration/test_scripts.py:378:
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 self = da941b69-1b1e-4eed-bec1-7689a0c12d54/1d395dc9-d035-46ba-a448-63466a4ec6bdomero.api.IScript -t -e 1.1:tcp -h 172.18.0.10 -p 45689 -t 60000
07:16:54 scriptID = 6216, inputs = {}, waitSecs = None, _ctx = None
07:16:54 def runScript(self, scriptID, inputs, waitSecs, _ctx=None):
07:16:54 > return _M_omero.api.IScript._op_runScript.invoke(self, ((scriptID, inputs, waitSecs), _ctx))
07:16:54 E omero.NoProcessorAvailable: exception ::omero::NoProcessorAvailable
07:16:54 E {
07:16:54 E serverStackTrace =
07:16:54 E serverExceptionClass =
07:16:54 E message = No processor available! [0 response(s)]
07:16:54 E processorCount = 0
07:16:54 E }
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py:935: NoProcessorAvailable
07:16:54 ------------------------------ Captured log call -------------------------------
07:16:54 INFO omero.util.Resources:__init__.py:652 Starting
07:16:54 INFO omero.processor.ProcessorI:processor.py:814 Registering processor "_|!h15ZX:fn;pK.^=LYp/UsermodeProcessor-3bce1254-36d3-43e0-9f6a-a1e9badcb836" -t -e 1.1:tcp -h 127.0.0.1 -p 42521 -t 60000
07:16:54 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
07:16:54 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
07:16:54 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4740, group=3683, script=4954
07:16:54 Traceback (most recent call last):
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept
07:16:54 file, handle = self.lookup(scriptContext)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup
07:16:54 file = prx.validateScript(job, self.accepts_list)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler
07:16:54 return func(*args, **kwargs)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
07:16:54 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
07:16:54 omero.ValidationException: exception ::omero::ValidationException
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
07:16:54 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy74.doWork(Unknown Source)
07:16:54 at ome.services.util.Executor$Impl.execute(Executor.java:447)
07:16:54 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
07:16:54 at ome.services.throttling.Callback2.run(Callback2.java:43)
07:16:54 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
07:16:54 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
07:16:54 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor599.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source)
07:16:54 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
07:16:54 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
07:16:54 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.ValidationException
07:16:54 message = Found wrong number of files: []
07:16:54 }
07:16:54 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
07:16:54 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4740, group=3683, script=4954
07:16:54 Traceback (most recent call last):
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept
07:16:54 file, handle = self.lookup(scriptContext)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup
07:16:54 file = prx.validateScript(job, self.accepts_list)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler
07:16:54 return func(*args, **kwargs)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
07:16:54 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
07:16:54 omero.ValidationException: exception ::omero::ValidationException
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
07:16:54 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy74.doWork(Unknown Source)
07:16:54 at ome.services.util.Executor$Impl.execute(Executor.java:447)
07:16:54 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
07:16:54 at ome.services.throttling.Callback2.run(Callback2.java:43)
07:16:54 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
07:16:54 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
07:16:54 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor599.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source)
07:16:54 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
07:16:54 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
07:16:54 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.ValidationException
07:16:54 message = Found wrong number of files: []
07:16:54 }
07:16:54 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
07:16:54 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
07:16:54 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
07:16:54 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4740, group=3683, script=4955
07:16:54 Traceback (most recent call last):
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept
07:16:54 file, handle = self.lookup(scriptContext)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup
07:16:54 file = prx.validateScript(job, self.accepts_list)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler
07:16:54 return func(*args, **kwargs)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
07:16:54 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
07:16:54 omero.ValidationException: exception ::omero::ValidationException
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
07:16:54 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy74.doWork(Unknown Source)
07:16:54 at ome.services.util.Executor$Impl.execute(Executor.java:447)
07:16:54 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
07:16:54 at ome.services.throttling.Callback2.run(Callback2.java:43)
07:16:54 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
07:16:54 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
07:16:54 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor599.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source)
07:16:54 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
07:16:54 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
07:16:54 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.ValidationException
07:16:54 message = Found wrong number of files: []
07:16:54 }
07:16:54 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
07:16:54 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4740, group=3683, script=4955
07:16:54 Traceback (most recent call last):
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept
07:16:54 file, handle = self.lookup(scriptContext)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup
07:16:54 file = prx.validateScript(job, self.accepts_list)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler
07:16:54 return func(*args, **kwargs)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
07:16:54 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
07:16:54 omero.ValidationException: exception ::omero::ValidationException
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
07:16:54 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy74.doWork(Unknown Source)
07:16:54 at ome.services.util.Executor$Impl.execute(Executor.java:447)
07:16:54 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
07:16:54 at ome.services.throttling.Callback2.run(Callback2.java:43)
07:16:54 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
07:16:54 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
07:16:54 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor599.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source)
07:16:54 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
07:16:54 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
07:16:54 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.ValidationException
07:16:54 message = Found wrong number of files: []
07:16:54 }
07:16:54 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
07:16:54 INFO omero.processor.ProcessorI:__init__.py:597 Cleaning up
07:16:54 INFO omero.processor.ProcessorI:__init__.py:599 Done
07:16:54 ______________ TestScripts.testParamLoadingPerformanceTicket2285 _______________
07:16:54 self = <test.integration.test_scripts.TestScripts object at 0x7ff381491d90>
07:16:54 @pytest.mark.broken(reason="Minor performance failure", ticket="11539")
07:16:54 def testParamLoadingPerformanceTicket2285(self):
07:16:54 root_client = self.new_client(system=True)
07:16:54 svc = root_client.sf.getScriptService()
07:16:54 SCRIPT = """if True:
07:16:54 import omero.model as OM
07:16:54 import omero.rtypes as OR
07:16:54 import omero.scripts as OS
07:16:54 c = OS.client("perf test",
07:16:54 OS.Long("a", min=0, max=5),
07:16:54 OS.String("b", values=("a","b","c")),
07:16:54 OS.List("c").ofType(OM.ImageI))
07:16:54 """
07:16:54 upload_time, scriptID = self.timeit(
07:16:54 svc.uploadOfficialScript, "/test/perf%s.py" % self.uuid(), SCRIPT)
07:16:54 impl = omero.processor.usermode_processor(root_client)
07:16:54 try:
07:16:54 params_time, params = self.timeit(svc.getParams, scriptID)
07:16:54 assert params_time < (upload_time / 10), \
07:16:54 "upload_time(%s) <= 10 * params_time(%s)!" % \
07:16:54 (upload_time, params_time)
07:16:54 assert params_time < 0.1, "params_time(%s) >= 0.01 !" % params_time
07:16:54 > run_time, process = self.timeit(
07:16:54 svc.runScript, scriptID, wrap({"a": int(5)}).val, None)
07:16:54 test/integration/test_scripts.py:417:
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/omero/testlib/__init__.py:612: in timeit
07:16:54 rv = func(*args, **kwargs)
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 self = f11ee6e1-6b05-4b08-8cb5-3f08f6f4518b/f8cb8373-50bf-4a99-956c-64b7aa376324omero.api.IScript -t -e 1.1:tcp -h 172.18.0.10 -p 45689 -t 60000
07:16:54 scriptID = 6217, inputs = {'a': object #0 (::omero::RInt)
07:16:54 {
07:16:54 _val = 5
07:16:54 }}
07:16:54 waitSecs = None, _ctx = None
07:16:54 def runScript(self, scriptID, inputs, waitSecs, _ctx=None):
07:16:54 > return _M_omero.api.IScript._op_runScript.invoke(self, ((scriptID, inputs, waitSecs), _ctx))
07:16:54 E omero.ValidationException: exception ::omero::ValidationException
07:16:54 E {
07:16:54 E serverStackTrace =
07:16:54 E serverExceptionClass =
07:16:54 E message = Invalid parameters:
07:16:54 E WRONG TYPE for "a": <class 'omero.rtypes.RIntI'> != <class 'omero.rtypes.RLongI'>
07:16:54 E
07:16:54 E }
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py:935: ValidationException
07:16:54 ------------------------------ Captured log call -------------------------------
07:16:54 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
07:16:54 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
07:16:54 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4741, group=3684, script=4956
07:16:54 Traceback (most recent call last):
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 858, in willAccept
07:16:54 handle.close()
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler
07:16:54 return func(*args, **kwargs)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_ServicesF_ice.py", line 287, in close
07:16:54 return _M_omero.api.StatefulServiceInterface._op_close.invoke(self, ((), _ctx))
07:16:54 omero.SecurityViolation: exception ::omero::SecurityViolation
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.SecurityViolation: User 4740 is not a member of group 3684 and cannot login
07:16:54 at ome.security.basic.BasicSecuritySystem.loadEventContext(BasicSecuritySystem.java:514)
07:16:54 at ome.security.basic.EventHandler.doLogin(EventHandler.java:210)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:146)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:216)
07:16:54 at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:200)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy92.close(Unknown Source)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor535.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy92.close(Unknown Source)
07:16:54 at ome.services.blitz.impl.AbstractCloseableAmdServant.close_async(AbstractCloseableAmdServant.java:90)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor566.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy93.close_async(Unknown Source)
07:16:54 at omero.api._JobHandleTie.close_async(_JobHandleTie.java:144)
07:16:54 at omero.api._StatefulServiceInterfaceDisp.___close(_StatefulServiceInterfaceDisp.java:185)
07:16:54 at omero.api._JobHandleDisp.__dispatch(_JobHandleDisp.java:597)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.SecurityViolation
07:16:54 message = User 4740 is not a member of group 3684 and cannot login
07:16:54 }
07:16:54 INFO omero.remote:decorators.py:75 Rslt: <class 'bool'>
07:16:54 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
07:16:54 INFO omero.util.Resources:__init__.py:652 Starting
07:16:54 INFO omero.processor.ProcessorI:processor.py:814 Registering processor "UT-s$!o~1coDk(:TwDFv/UsermodeProcessor-fa64a8c5-6a84-4f0c-abfe-87b4d29b7690" -t -e 1.1:tcp -h 127.0.0.1 -p 42521 -t 60000
07:16:54 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
07:16:54 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
07:16:54 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
07:16:54 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4741, group=3684, script=4957
07:16:54 Traceback (most recent call last):
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 858, in willAccept
07:16:54 handle.close()
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler
07:16:54 return func(*args, **kwargs)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_ServicesF_ice.py", line 287, in close
07:16:54 return _M_omero.api.StatefulServiceInterface._op_close.invoke(self, ((), _ctx))
07:16:54 omero.SecurityViolation: exception ::omero::SecurityViolation
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.SecurityViolation: User 4740 is not a member of group 3684 and cannot login
07:16:54 at ome.security.basic.BasicSecuritySystem.loadEventContext(BasicSecuritySystem.java:514)
07:16:54 at ome.security.basic.EventHandler.doLogin(EventHandler.java:210)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:146)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:216)
07:16:54 at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:200)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy92.close(Unknown Source)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor535.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy92.close(Unknown Source)
07:16:54 at ome.services.blitz.impl.AbstractCloseableAmdServant.close_async(AbstractCloseableAmdServant.java:90)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor566.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy93.close_async(Unknown Source)
07:16:54 at omero.api._JobHandleTie.close_async(_JobHandleTie.java:144)
07:16:54 at omero.api._StatefulServiceInterfaceDisp.___close(_StatefulServiceInterfaceDisp.java:185)
07:16:54 at omero.api._JobHandleDisp.__dispatch(_JobHandleDisp.java:597)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.SecurityViolation
07:16:54 message = User 4740 is not a member of group 3684 and cannot login
07:16:54 }
07:16:54 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
07:16:54 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4741, group=3684, script=4957
07:16:54 Traceback (most recent call last):
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept
07:16:54 file, handle = self.lookup(scriptContext)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup
07:16:54 file = prx.validateScript(job, self.accepts_list)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler
07:16:54 return func(*args, **kwargs)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
07:16:54 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
07:16:54 omero.ValidationException: exception ::omero::ValidationException
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
07:16:54 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy74.doWork(Unknown Source)
07:16:54 at ome.services.util.Executor$Impl.execute(Executor.java:447)
07:16:54 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
07:16:54 at ome.services.throttling.Callback2.run(Callback2.java:43)
07:16:54 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
07:16:54 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
07:16:54 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor599.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source)
07:16:54 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
07:16:54 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
07:16:54 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.ValidationException
07:16:54 message = Found wrong number of files: []
07:16:54 }
07:16:54 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
07:16:54 INFO omero.remote:decorators.py:75 Rslt: <class 'bool'>
07:16:54 INFO omero.processor.ProcessorI:__init__.py:597 Cleaning up
07:16:54 INFO omero.processor.ProcessorI:__init__.py:599 Done
07:16:54 _____________________________ TestScripts.test3527 _____________________________
07:16:54 self = <test.integration.test_scripts.TestScripts object at 0x7ff381491ee0>
07:16:54 @pytest.mark.broken(ticket="11610")
07:16:54 def test3527(self):
07:16:54 SCRIPT = """if True:
07:16:54 import omero.scripts
07:16:54 import omero.rtypes
07:16:54 client = omero.scripts.client("ticket3527", \
07:16:54 omero.scripts.Long("gid", out=True))
07:16:54 ec = client.sf.getAdminService().getEventContext()
07:16:54 gid = ec.groupId
07:16:54 client.setOutput("gid", omero.rtypes.rlong(gid))
07:16:54 """
07:16:54 impl = omero.processor.usermode_processor(self.client)
07:16:54 svc = self.client.sf.getScriptService()
07:16:54 try:
07:16:54 scriptID = svc.uploadScript("/test/test3527", SCRIPT)
07:16:54 > process = svc.runScript(scriptID, {}, None)
07:16:54 test/integration/test_scripts.py:521:
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 self = da941b69-1b1e-4eed-bec1-7689a0c12d54/1d395dc9-d035-46ba-a448-63466a4ec6bdomero.api.IScript -t -e 1.1:tcp -h 172.18.0.10 -p 45689 -t 60000
07:16:54 scriptID = 6219, inputs = {}, waitSecs = None, _ctx = None
07:16:54 def runScript(self, scriptID, inputs, waitSecs, _ctx=None):
07:16:54 > return _M_omero.api.IScript._op_runScript.invoke(self, ((scriptID, inputs, waitSecs), _ctx))
07:16:54 E omero.NoProcessorAvailable: exception ::omero::NoProcessorAvailable
07:16:54 E {
07:16:54 E serverStackTrace =
07:16:54 E serverExceptionClass =
07:16:54 E message = No processor available! [0 response(s)]
07:16:54 E processorCount = 0
07:16:54 E }
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py:935: NoProcessorAvailable
07:16:54 ------------------------------ Captured log call -------------------------------
07:16:54 INFO omero.util.Resources:__init__.py:652 Starting
07:16:54 INFO omero.processor.ProcessorI:processor.py:814 Registering processor "_|!h15ZX:fn;pK.^=LYp/UsermodeProcessor-b38a1bbe-f0cc-49ef-83ce-0ab873fb28cd" -t -e 1.1:tcp -h 127.0.0.1 -p 42521 -t 60000
07:16:54 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
07:16:54 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
07:16:54 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
07:16:54 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
07:16:54 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4740, group=3683, script=4958
07:16:54 Traceback (most recent call last):
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept
07:16:54 file, handle = self.lookup(scriptContext)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup
07:16:54 file = prx.validateScript(job, self.accepts_list)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler
07:16:54 return func(*args, **kwargs)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
07:16:54 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
07:16:54 omero.ValidationException: exception ::omero::ValidationException
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
07:16:54 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy74.doWork(Unknown Source)
07:16:54 at ome.services.util.Executor$Impl.execute(Executor.java:447)
07:16:54 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
07:16:54 at ome.services.throttling.Callback2.run(Callback2.java:43)
07:16:54 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
07:16:54 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
07:16:54 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor599.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source)
07:16:54 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
07:16:54 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
07:16:54 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.ValidationException
07:16:54 message = Found wrong number of files: []
07:16:54 }
07:16:54 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
07:16:54 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4740, group=3683, script=4958
07:16:54 Traceback (most recent call last):
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept
07:16:54 file, handle = self.lookup(scriptContext)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup
07:16:54 file = prx.validateScript(job, self.accepts_list)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler
07:16:54 return func(*args, **kwargs)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
07:16:54 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
07:16:54 omero.ValidationException: exception ::omero::ValidationException
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
07:16:54 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy74.doWork(Unknown Source)
07:16:54 at ome.services.util.Executor$Impl.execute(Executor.java:447)
07:16:54 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
07:16:54 at ome.services.throttling.Callback2.run(Callback2.java:43)
07:16:54 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
07:16:54 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
07:16:54 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor599.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source)
07:16:54 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
07:16:54 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
07:16:54 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.ValidationException
07:16:54 message = Found wrong number of files: []
07:16:54 }
07:16:54 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
07:16:54 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4740, group=3683, script=4958
07:16:54 Traceback (most recent call last):
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept
07:16:54 file, handle = self.lookup(scriptContext)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup
07:16:54 file = prx.validateScript(job, self.accepts_list)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler
07:16:54 return func(*args, **kwargs)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
07:16:54 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
07:16:54 omero.ValidationException: exception ::omero::ValidationException
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
07:16:54 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy74.doWork(Unknown Source)
07:16:54 at ome.services.util.Executor$Impl.execute(Executor.java:447)
07:16:54 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
07:16:54 at ome.services.throttling.Callback2.run(Callback2.java:43)
07:16:54 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
07:16:54 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
07:16:54 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor599.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source)
07:16:54 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
07:16:54 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
07:16:54 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.ValidationException
07:16:54 message = Found wrong number of files: []
07:16:54 }
07:16:54 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
07:16:54 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4740, group=3683, script=4958
07:16:54 Traceback (most recent call last):
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept
07:16:54 file, handle = self.lookup(scriptContext)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup
07:16:54 file = prx.validateScript(job, self.accepts_list)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler
07:16:54 return func(*args, **kwargs)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
07:16:54 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
07:16:54 omero.ValidationException: exception ::omero::ValidationException
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
07:16:54 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy74.doWork(Unknown Source)
07:16:54 at ome.services.util.Executor$Impl.execute(Executor.java:447)
07:16:54 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
07:16:54 at ome.services.throttling.Callback2.run(Callback2.java:43)
07:16:54 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
07:16:54 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
07:16:54 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor599.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source)
07:16:54 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
07:16:54 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
07:16:54 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.ValidationException
07:16:54 message = Found wrong number of files: []
07:16:54 }
07:16:54 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
07:16:54 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
07:16:54 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
07:16:54 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
07:16:54 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
07:16:54 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4740, group=3683, script=4959
07:16:54 Traceback (most recent call last):
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept
07:16:54 file, handle = self.lookup(scriptContext)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup
07:16:54 file = prx.validateScript(job, self.accepts_list)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler
07:16:54 return func(*args, **kwargs)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
07:16:54 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
07:16:54 omero.ValidationException: exception ::omero::ValidationException
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
07:16:54 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy74.doWork(Unknown Source)
07:16:54 at ome.services.util.Executor$Impl.execute(Executor.java:447)
07:16:54 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
07:16:54 at ome.services.throttling.Callback2.run(Callback2.java:43)
07:16:54 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
07:16:54 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
07:16:54 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor599.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source)
07:16:54 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
07:16:54 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
07:16:54 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.ValidationException
07:16:54 message = Found wrong number of files: []
07:16:54 }
07:16:54 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4740, group=3683, script=4959
07:16:54 Traceback (most recent call last):
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept
07:16:54 file, handle = self.lookup(scriptContext)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup
07:16:54 file = prx.validateScript(job, self.accepts_list)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler
07:16:54 return func(*args, **kwargs)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
07:16:54 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
07:16:54 omero.ValidationException: exception ::omero::ValidationException
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
07:16:54 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy74.doWork(Unknown Source)
07:16:54 at ome.services.util.Executor$Impl.execute(Executor.java:447)
07:16:54 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
07:16:54 at ome.services.throttling.Callback2.run(Callback2.java:43)
07:16:54 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
07:16:54 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
07:16:54 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor599.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source)
07:16:54 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
07:16:54 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
07:16:54 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.ValidationException
07:16:54 message = Found wrong number of files: []
07:16:54 }
07:16:54 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
07:16:54 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
07:16:54 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4740, group=3683, script=4959
07:16:54 Traceback (most recent call last):
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept
07:16:54 file, handle = self.lookup(scriptContext)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup
07:16:54 file = prx.validateScript(job, self.accepts_list)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler
07:16:54 return func(*args, **kwargs)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
07:16:54 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
07:16:54 omero.ValidationException: exception ::omero::ValidationException
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
07:16:54 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy74.doWork(Unknown Source)
07:16:54 at ome.services.util.Executor$Impl.execute(Executor.java:447)
07:16:54 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
07:16:54 at ome.services.throttling.Callback2.run(Callback2.java:43)
07:16:54 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
07:16:54 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
07:16:54 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor599.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source)
07:16:54 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
07:16:54 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
07:16:54 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.ValidationException
07:16:54 message = Found wrong number of files: []
07:16:54 }
07:16:54 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4740, group=3683, script=4959
07:16:54 Traceback (most recent call last):
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept
07:16:54 file, handle = self.lookup(scriptContext)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup
07:16:54 file = prx.validateScript(job, self.accepts_list)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler
07:16:54 return func(*args, **kwargs)
07:16:54 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
07:16:54 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
07:16:54 omero.ValidationException: exception ::omero::ValidationException
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
07:16:54 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy74.doWork(Unknown Source)
07:16:54 at ome.services.util.Executor$Impl.execute(Executor.java:447)
07:16:54 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
07:16:54 at ome.services.throttling.Callback2.run(Callback2.java:43)
07:16:54 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
07:16:54 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
07:16:54 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor599.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source)
07:16:54 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
07:16:54 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
07:16:54 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.ValidationException
07:16:54 message = Found wrong number of files: []
07:16:54 }
07:16:54 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
07:16:54 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
07:16:54 INFO omero.processor.ProcessorI:__init__.py:597 Cleaning up
07:16:54 INFO omero.processor.ProcessorI:__init__.py:599 Done
07:16:54 _______________ TestThumbnailPerms.testPrivate10618RootWithNoCtx _______________
07:16:54 self = <test.integration.test_thumbnailPerms.TestThumbnailPerms object at 0x7ff3814492b0>
07:16:54 @pytest.mark.broken(reason="requires thumbnail work")
07:16:54 def testPrivate10618RootWithNoCtx(self):
07:16:54 """
07:16:54 This would require the server to try omero.group=-1
07:16:54 for the user.
07:16:54 """
07:16:54 group = self.new_group(perms="rw----")
07:16:54 > self.assert10618(group, self.root, True)
07:16:54 test/integration/test_thumbnailPerms.py:256:
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 test/integration/test_thumbnailPerms.py:217: in assert10618
07:16:54 s = tb_prx.getThumbnailByLongestSideSet(rint(16), [pId], *ctx)
07:16:54 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
07:16:54 self = ab49534d-d21b-4fdd-b8d3-1de89874cf39/e92647e0-4aa7-4995-8b29-f89c878efabeomero.api.ThumbnailStore -t -e 1.1:tcp -h 172.18.0.10 -p 45689 -t 60000
07:16:54 size = object #0 (::omero::RInt)
07:16:54 {
07:16:54 _val = 16
07:16:54 }, pixelsIds = [2901]
07:16:54 _ctx = None
07:16:54 def getThumbnailByLongestSideSet(self, size, pixelsIds, _ctx=None):
07:16:54 > return _M_omero.api.ThumbnailStore._op_getThumbnailByLongestSideSet.invoke(self, ((size, pixelsIds), _ctx))
07:16:54 E omero.ResourceError: exception ::omero::ResourceError
07:16:54 E {
07:16:54 E serverStackTrace = ome.conditions.ResourceError: Error retrieving Pixels id:2901. Pixels set does not exist or the user id:0 has insufficient permissions to retrieve it.
07:16:54 E at ome.services.ThumbnailCtx.isExtendedGraphCritical(ThumbnailCtx.java:749)
07:16:54 E at ome.services.ThumbnailCtx.createAndPrepareMissingRenderingSettings(ThumbnailCtx.java:388)
07:16:54 E at ome.services.ThumbnailBean.getThumbnailByLongestSideSet(ThumbnailBean.java:1003)
07:16:54 E at jdk.internal.reflect.GeneratedMethodAccessor3888.invoke(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 E at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:216)
07:16:54 E at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:200)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 E at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 E at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 E at com.sun.proxy.$Proxy113.getThumbnailByLongestSideSet(Unknown Source)
07:16:54 E at jdk.internal.reflect.GeneratedMethodAccessor3888.invoke(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 E at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 E at com.sun.proxy.$Proxy113.getThumbnailByLongestSideSet(Unknown Source)
07:16:54 E at jdk.internal.reflect.GeneratedMethodAccessor3893.invoke(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
07:16:54 E at ome.services.throttling.Callback.run(Callback.java:56)
07:16:54 E at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
07:16:54 E at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
07:16:54 E at ome.services.blitz.impl.ThumbnailStoreI.getThumbnailByLongestSideSet_async(ThumbnailStoreI.java:83)
07:16:54 E at jdk.internal.reflect.GeneratedMethodAccessor3892.invoke(Unknown Source)
07:16:54 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 E at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 E at com.sun.proxy.$Proxy114.getThumbnailByLongestSideSet_async(Unknown Source)
07:16:54 E at omero.api._ThumbnailStoreTie.getThumbnailByLongestSideSet_async(_ThumbnailStoreTie.java:132)
07:16:54 E at omero.api._ThumbnailStoreDisp.___getThumbnailByLongestSideSet(_ThumbnailStoreDisp.java:743)
07:16:54 E at omero.api._ThumbnailStoreDisp.__dispatch(_ThumbnailStoreDisp.java:1088)
07:16:54 E at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 E at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 E at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 E at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 E at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 E at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 E at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 E at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 E
07:16:54 E serverExceptionClass = ome.conditions.ResourceError
07:16:54 E message = Error retrieving Pixels id:2901. Pixels set does not exist or the user id:0 has insufficient permissions to retrieve it.
07:16:54 E }
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/omero_api_ThumbnailStore_ice.py:730: ResourceError
07:16:54 ___________________________ TestTickets2000.test1184 ___________________________
07:16:54 self = <test.integration.test_tickets2000.TestTickets2000 object at 0x7ff381419f40>
07:16:54 @pytest.mark.broken(ticket="11543")
07:16:54 def test1184(self):
07:16:54 uuid = self.uuid()
07:16:54 client = self.new_client(perms="rw----")
07:16:54 query = client.sf.getQueryService()
07:16:54 update = client.sf.getUpdateService()
07:16:54 admin = client.sf.getAdminService()
07:16:54 cont = client.sf.getContainerService()
07:16:54 ds = self.new_dataset(name='test1184-ds-%s' % (uuid))
07:16:54 for i in range(1, 2001):
07:16:54 img = self.new_image(name='img1184-%s' % (uuid))
07:16:54 ds.linkImage(img)
07:16:54 ds = update.saveAndReturnObject(ds)
07:16:54 c = cont.getCollectionCount(
07:16:54 ds.__class__.__name__, ("imageLinks"), [ds.id.val], None)
07:16:54 assert c[ds.id.val] == 2000
07:16:54 page = 1
07:16:54 p = omero.sys.Parameters()
07:16:54 p.map = {}
07:16:54 p.map["eid"] = rlong(admin.getEventContext().userId)
07:16:54 p.map["oid"] = rlong(ds.id.val)
07:16:54 if page is not None:
07:16:54 f = omero.sys.Filter()
07:16:54 f.limit = rint(24)
07:16:54 f.offset = rint((int(page) - 1) * 24)
07:16:54 p.theFilter = f
07:16:54 sql = "select im from Image im join fetch im.details.owner " \
07:16:54 "join fetch im.details.group left outer join fetch " \
07:16:54 "im.datasetLinks dil left outer join fetch dil.parent d " \
07:16:54 "where d.id = :oid and im.details.owner.id=:eid " \
07:16:54 "order by im.id asc"
07:16:54 start = time.time()
07:16:54 res = query.findAllByQuery(sql, p)
07:16:54 assert 24 == len(res)
07:16:54 end = time.time()
07:16:54 elapsed = end - start
07:16:54 > assert elapsed < 3.0, \
07:16:54 "Expected the test to complete in < 3 seconds, took: %f" % elapsed
07:16:54 E AssertionError: Expected the test to complete in < 3 seconds, took: 11.036403
07:16:54 E assert 11.036402940750122 < 3.0
07:16:54 test/integration/test_tickets2000.py:370: AssertionError
07:16:54 =============================== warnings summary ===============================
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/Ice.py:14
07:16:54 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/Ice.py:14: DeprecationWarning: the imp module is deprecated in favour of importlib; see the module's documentation for alternative uses
07:16:54 import sys, string, imp, os, threading, warnings, datetime
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:241
07:16:54 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:241: RemovedInDjango50Warning: The default value of USE_TZ will change from False to True in Django 5.0. Set USE_TZ to False in your project settings if you want to keep the current default behavior.
07:16:54 warnings.warn(
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:289
07:16:54 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:289: RemovedInDjango51Warning: The STATICFILES_STORAGE setting is deprecated. Use STORAGES instead.
07:16:54 warnings.warn(STATICFILES_STORAGE_DEPRECATED_MSG, RemovedInDjango51Warning)
07:16:54 ../../../../.venv3/lib64/python3.9/site-packages/pipeline/__init__.py:1
07:16:54 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/pipeline/__init__.py:1: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html
07:16:54 from pkg_resources import DistributionNotFound, get_distribution
07:16:54 OmeroPy/test/integration/clitest/test_import.py::TestImport::testTargetInDifferentGroup[Dataset-test.fake--d]
07:16:54 OmeroPy/test/integration/clitest/test_import.py::TestImport::testTargetInDifferentGroup[Screen-SPW&plates=1&plateRows=1&plateCols=1&fields=1&plateAcqs=1.fake--r]
07:16:54 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/plugins/sessions.py:176: DeprecationWarning: OMERO_SESSION_DIR is deprecated. Use OMERO_SESSIONDIR instead.
07:16:54 warnings.warn(
07:16:54 OmeroPy/test/integration/gatewaytest/test_multi_group.py::TestHistory::testCreateHistory
07:16:54 OmeroPy/test/integration/gatewaytest/test_multi_group.py::TestHistory::testCreateHistory
07:16:54 OmeroPy/test/integration/gatewaytest/test_multi_group.py::TestScript::testRunScript
07:16:54 OmeroPy/test/integration/gatewaytest/test_multi_group.py::TestScript::testRunScript
07:16:54 OmeroPy/test/integration/gatewaytest/test_multi_group.py::TestScript::testRunScript
07:16:54 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py:4810: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead
07:16:54 logger.warn("%s on %s to <%s> %s(%r, %r)",
07:16:54 OmeroPy/test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testPrivate10618RootWithNoCtx
07:16:54 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/script_utils.py:1093: DeprecationWarning: tostring() is deprecated. Use tobytes() instead.
07:16:54 converted_plane = byte_swapped_plane.tostring()
07:16:54 -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
07:16:54 - generated xml file: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/target/reports/broken/junit-results.xml -
07:16:54 =========================== short test summary info ============================
07:16:54 FAILED test/integration/clitest/test_fs.py::TestFS::testRenameAdminOnly - AssertionError: assert False
07:16:54 + where False = <built-in method endswith of str object at 0x7ff374dc5260>('SecurityViolation: Admins only!\n')
07:16:54 + where <built-in method endswith of str object at 0x7ff374dc5260> = 'disabled since OMERO 5.4.7 due to Pixels.path bug\n'.endswith
07:16:54 FAILED test/integration/clitest/test_import.py::TestImport::testTargetInDifferentGroup[Dataset-test.fake--d] - omero.cli.NonZeroReturnCode: assert failed
07:16:54 FAILED test/integration/clitest/test_import.py::TestImport::testTargetInDifferentGroup[Screen-SPW&plates=1&plateRows=1&plateCols=1&fields=1&plateAcqs=1.fake--r] - omero.cli.NonZeroReturnCode: assert failed
07:16:54 FAILED test/integration/gatewaytest/test_multi_group.py::TestHistory::testCreateHistory - AssertionError: Logs count should match number of objects
07:16:54 assert 1 == 0
07:16:54 FAILED test/integration/gatewaytest/test_multi_group.py::TestScript::testRunScript - omero.NoProcessorAvailable: exception ::omero::NoProcessorAvailable
07:16:54 {
07:16:54 serverStackTrace =
07:16:54 serverExceptionClass =
07:16:54 message = No processor available! [0 response(s)]
07:16:54 processorCount = 0
07:16:54 }
07:16:54 FAILED test/integration/gatewaytest/test_performance.py::TestPerformance::testListFileAnnotations - AssertionError: Blitz listFileAnnotations() should be faster than getObjects('FileAnnotation')
07:16:54 assert 0.2409670352935791 < 0.2193007469177246
07:16:54 FAILED test/integration/gatewaytest/test_user.py::TestUser::testCrossGroupRead - assert not 2719 in [2718, 1, 2730, 2719, 2780]
07:16:54 + where 2719 = getId()
07:16:54 + where getId = <_ExperimenterGroupWrapper id=2719>.getId
07:16:54 + and [2718, 1, 2730, 2719, 2780] = object #0 (::omero::sys::EventContext)\n{\n shareId = -1\n sessionId = 10312\n sessionUuid = 738e4abc-91b5-4074-9a9e-3a0260d55356\n userId = 3728\n userName = weblitz_test_user\n sudoerId = <nil>\n sudoerName = <nil>\n groupId = 2718\n groupName = weblitz_test_user_group\n isAdmin = False\n adminPrivileges = \n {\n }\n eventId = -1\n eventType = Internal\n memberOfGroups = \n {\n [0] = 2718\n [1] = 1\n [2] = 2730\n [3] = 2719\n [4] = 2780\n }\n leaderOfGroups = \n {\n }\n groupPermissions = object #1 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -56\n }\n}.memberOfGroups
07:16:54 + where object #0 (::omero::sys::EventContext)\n{\n shareId = -1\n sessionId = 10312\n sessionUuid = 738e4abc-91b5-4074-9a9e-3a0260d55356\n userId = 3728\n userName = weblitz_test_user\n sudoerId = <nil>\n sudoerName = <nil>\n groupId = 2718\n groupName = weblitz_test_user_group\n isAdmin = False\n adminPrivileges = \n {\n }\n eventId = -1\n eventType = Internal\n memberOfGroups = \n {\n [0] = 2718\n [1] = 1\n [2] = 2730\n [3] = 2719\n [4] = 2780\n }\n leaderOfGroups = \n {\n }\n groupPermissions = object #1 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -56\n }\n} = getEventContext()
07:16:54 + where getEventContext = <omero.gateway._BlitzGateway object at 0x7ff3a83ec1f0>.getEventContext
07:16:54 + where <omero.gateway._BlitzGateway object at 0x7ff3a83ec1f0> = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7ff374dd8730>.gateway
07:16:54 FAILED test/integration/scriptstest/test_ping.py::TestPing::testProcessCallback - assert 0 > 0
07:16:54 + where 0 = len([])
07:16:54 + where [] = object #0 (::omero::grid::ProcessCallback)\n{\n}.finish
07:16:54 FAILED test/integration/scriptstest/test_repo.py::TestScriptRepo::testGetGroupScripts - assert 6202 in []
07:16:54 FAILED test/integration/tablestest/test_service.py::TestTables::test2098 - AttributeError: type object 'path' has no attribute 'path'
07:16:54 FAILED test/integration/tablestest/test_service.py::TestTables::testReadOnlyFile - AttributeError: 'TestTables' object has no attribute 'unique_dir'
07:16:54 FAILED test/integration/tablestest/test_service.py::TestTables::testReadEqual - assert [1] == [1, 2, 3, 4, 5]
07:16:54 Right contains 4 more items, first extra item: 2
07:16:54 Full diff:
07:16:54 [
07:16:54 1,
07:16:54 - 2,
07:16:54 - 3,
07:16:54 - 4,
07:16:54 - 5,
07:16:54 ]
07:16:54 FAILED test/integration/tablestest/test_service.py::TestTables::testReadOutOfRange - assert [4] == [-1, 0, 1, 2, 3, 4]
07:16:54 At index 0 diff: 4 != -1
07:16:54 Right contains 5 more items, first extra item: 0
07:16:54 Full diff:
07:16:54 [
07:16:54 - -1,
07:16:54 - 0,
07:16:54 - 1,
07:16:54 - 2,
07:16:54 - 3,
07:16:54 4,
07:16:54 ]
07:16:54 FAILED test/integration/test_admin.py::TestAdmin::testChangePasswordWhenUnset - omero.SecurityViolation: exception ::omero::SecurityViolation
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.SecurityViolation: Old password is invalid
07:16:54 at ome.logic.AdminImpl.changePasswordWithOldPassword(AdminImpl.java:1253)
07:16:54 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
07:16:54 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy98.changePasswordWithOldPassword(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
07:16:54 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy98.changePasswordWithOldPassword(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
07:16:54 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
07:16:54 at ome.services.throttling.Callback.run(Callback.java:56)
07:16:54 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
07:16:54 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
07:16:54 at ome.services.blitz.impl.AdminI.changePasswordWithOldPassword_async(AdminI.java:144)
07:16:54 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
07:16:54 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy99.changePasswordWithOldPassword_async(Unknown Source)
07:16:54 at omero.api._IAdminTie.changePasswordWithOldPassword_async(_IAdminTie.java:112)
07:16:54 at omero.api._IAdminDisp.___changePasswordWithOldPassword(_IAdminDisp.java:1977)
07:16:54 at omero.api._IAdminDisp.__dispatch(_IAdminDisp.java:2229)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.SecurityViolation
07:16:54 message = Old password is invalid
07:16:54 }
07:16:54 FAILED test/integration/test_admin.py::TestAdmin::test9193 - omero.ValidationException: exception ::omero::ValidationException
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.ValidationException: experimenter cannot be a member of only the 'user' group, a different default group is also required
07:16:54 at ome.logic.AdminImpl.removeGroups(AdminImpl.java:813)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor635.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy98.removeGroups(Unknown Source)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor635.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy98.removeGroups(Unknown Source)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor3278.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
07:16:54 at ome.services.throttling.Callback.run(Callback.java:56)
07:16:54 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
07:16:54 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
07:16:54 at ome.services.blitz.impl.AdminI.removeGroups_async(AdminI.java:318)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor3277.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy99.removeGroups_async(Unknown Source)
07:16:54 at omero.api._IAdminTie.removeGroups_async(_IAdminTie.java:312)
07:16:54 at omero.api._IAdminDisp.___removeGroups(_IAdminDisp.java:1621)
07:16:54 at omero.api._IAdminDisp.__dispatch(_IAdminDisp.java:2377)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.ValidationException
07:16:54 message = experimenter cannot be a member of only the 'user' group, a different default group is also required
07:16:54 }
07:16:54 FAILED test/integration/test_files.py::TestFiles::testUploadDifferentSizeTicket2337 - omero.OptimisticLockException: exception ::omero::OptimisticLockException
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.OptimisticLockException: You are not authorized to change the update event for ome.model.core.OriginalFile:Id_6207 from ome.model.meta.Event:Id_124689 to ome.model.meta.Event:Id_124688
07:16:54 You may need to reload the object before continuing.
07:16:54 at ome.security.basic.OmeroInterceptor.managedEvent(OmeroInterceptor.java:1201)
07:16:54 at ome.security.basic.OmeroInterceptor.checkManagedDetails(OmeroInterceptor.java:963)
07:16:54 at ome.security.basic.OmeroInterceptor.resetDetails(OmeroInterceptor.java:465)
07:16:54 at ome.security.basic.OmeroInterceptor.onFlushDirty(OmeroInterceptor.java:239)
07:16:54 at org.hibernate.event.def.DefaultFlushEntityEventListener.invokeInterceptor(DefaultFlushEntityEventListener.java:372)
07:16:54 at org.hibernate.event.def.DefaultFlushEntityEventListener.handleInterception(DefaultFlushEntityEventListener.java:349)
07:16:54 at org.hibernate.event.def.DefaultFlushEntityEventListener.scheduleUpdate(DefaultFlushEntityEventListener.java:287)
07:16:54 at org.hibernate.event.def.DefaultFlushEntityEventListener.onFlushEntity(DefaultFlushEntityEventListener.java:155)
07:16:54 at org.hibernate.event.def.AbstractFlushingEventListener.flushEntities(AbstractFlushingEventListener.java:219)
07:16:54 at org.hibernate.event.def.AbstractFlushingEventListener.flushEverythingToExecutions(AbstractFlushingEventListener.java:99)
07:16:54 at org.hibernate.event.def.DefaultFlushEventListener.onFlush(DefaultFlushEventListener.java:50)
07:16:54 at org.hibernate.impl.SessionImpl.flush(SessionImpl.java:1216)
07:16:54 at ome.logic.UpdateImpl.afterUpdate(UpdateImpl.java:342)
07:16:54 at ome.logic.UpdateImpl.doAction(UpdateImpl.java:358)
07:16:54 at ome.logic.UpdateImpl.doAction(UpdateImpl.java:349)
07:16:54 at ome.logic.UpdateImpl.saveAndReturnObject(UpdateImpl.java:135)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor614.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy100.saveAndReturnObject(Unknown Source)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor614.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy100.saveAndReturnObject(Unknown Source)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor692.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
07:16:54 at ome.services.throttling.Callback.run(Callback.java:56)
07:16:54 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
07:16:54 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
07:16:54 at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:62)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor691.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy101.saveAndReturnObject_async(Unknown Source)
07:16:54 at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92)
07:16:54 at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:229)
07:16:54 at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:423)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.OptimisticLockException
07:16:54 message = You are not authorized to change the update event for ome.model.core.OriginalFile:Id_6207 from ome.model.meta.Event:Id_124689 to ome.model.meta.Event:Id_124688
07:16:54 You may need to reload the object before continuing.
07:16:54 backOff = 0
07:16:54 }
07:16:54 FAILED test/integration/test_ishare.py::TestIShare::test1172 - assert 0 == 1
07:16:54 + where 0 = len([])
07:16:54 FAILED test/integration/test_itimeline.py::TestITimeline::test1225 - assert 6 == 10
07:16:54 + where 6 = len({1908, 1944, 1995, 9450, 13072, 41480})
07:16:54 FAILED test/integration/test_permissions.py::TestPermissions::test3136 - AssertionError: elapsed1=0.08193707466125488, elapsed2=0.014493942260742188
07:16:54 assert 0.08193707466125488 < (0.1 * 0.014493942260742188)
07:16:54 FAILED test/integration/test_permissions.py::TestPermissions::testSaveWithNegOneExplicit - omero.ApiUsageException: exception ::omero::ApiUsageException
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.ApiUsageException: No valid permissions available! DUMMY permissions are not intended for copying. Make sure that you have not passed omero.group=-1 for a save without context
07:16:54 at ome.model.internal.Permissions.<init>(Permissions.java:164)
07:16:54 at ome.security.basic.CurrentDetails.createDetails(CurrentDetails.java:439)
07:16:54 at ome.security.basic.OmeroInterceptor.newTransientDetails(OmeroInterceptor.java:700)
07:16:54 at ome.security.basic.OmeroInterceptor.onSave(OmeroInterceptor.java:187)
07:16:54 at org.hibernate.event.def.AbstractSaveEventListener.substituteValuesIfNecessary(AbstractSaveEventListener.java:413)
07:16:54 at org.hibernate.event.def.AbstractSaveEventListener.performSaveOrReplicate(AbstractSaveEventListener.java:292)
07:16:54 at org.hibernate.event.def.AbstractSaveEventListener.performSave(AbstractSaveEventListener.java:203)
07:16:54 at org.hibernate.event.def.AbstractSaveEventListener.saveWithGeneratedId(AbstractSaveEventListener.java:143)
07:16:54 at org.hibernate.event.def.DefaultMergeEventListener.saveTransientEntity(DefaultMergeEventListener.java:415)
07:16:54 at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:341)
07:16:54 at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303)
07:16:54 at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62)
07:16:54 at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154)
07:16:54 at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258)
07:16:54 at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87)
07:16:54 at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:84)
07:16:54 at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:73)
07:16:54 at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:867)
07:16:54 at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:851)
07:16:54 at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:855)
07:16:54 at ome.logic.UpdateImpl.internalMerge(UpdateImpl.java:313)
07:16:54 at ome.logic.UpdateImpl$2.run(UpdateImpl.java:138)
07:16:54 at ome.logic.UpdateImpl$2.run(UpdateImpl.java:135)
07:16:54 at ome.logic.UpdateImpl.doAction(UpdateImpl.java:357)
07:16:54 at ome.logic.UpdateImpl.doAction(UpdateImpl.java:349)
07:16:54 at ome.logic.UpdateImpl.saveAndReturnObject(UpdateImpl.java:135)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor614.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy100.saveAndReturnObject(Unknown Source)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor614.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy100.saveAndReturnObject(Unknown Source)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor692.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
07:16:54 at ome.services.throttling.Callback.run(Callback.java:56)
07:16:54 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
07:16:54 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
07:16:54 at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:62)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor691.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy101.saveAndReturnObject_async(Unknown Source)
07:16:54 at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92)
07:16:54 at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:229)
07:16:54 at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:423)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.ApiUsageException
07:16:54 message = No valid permissions available! DUMMY permissions are not intended for copying. Make sure that you have not passed omero.group=-1 for a save without context
07:16:54 }
07:16:54 FAILED test/integration/test_permissions.py::TestPermissions::testSaveWithNegBadLink - omero.ApiUsageException: exception ::omero::ApiUsageException
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.ApiUsageException: No valid permissions available! DUMMY permissions are not intended for copying. Make sure that you have not passed omero.group=-1 for a save without context
07:16:54 at ome.model.internal.Permissions.<init>(Permissions.java:164)
07:16:54 at ome.security.basic.CurrentDetails.createDetails(CurrentDetails.java:439)
07:16:54 at ome.security.basic.OmeroInterceptor.newTransientDetails(OmeroInterceptor.java:700)
07:16:54 at ome.security.basic.OmeroInterceptor.onSave(OmeroInterceptor.java:187)
07:16:54 at org.hibernate.event.def.AbstractSaveEventListener.substituteValuesIfNecessary(AbstractSaveEventListener.java:413)
07:16:54 at org.hibernate.event.def.AbstractSaveEventListener.performSaveOrReplicate(AbstractSaveEventListener.java:292)
07:16:54 at org.hibernate.event.def.AbstractSaveEventListener.performSave(AbstractSaveEventListener.java:203)
07:16:54 at org.hibernate.event.def.AbstractSaveEventListener.saveWithGeneratedId(AbstractSaveEventListener.java:143)
07:16:54 at org.hibernate.event.def.DefaultMergeEventListener.saveTransientEntity(DefaultMergeEventListener.java:415)
07:16:54 at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:341)
07:16:54 at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303)
07:16:54 at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62)
07:16:54 at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154)
07:16:54 at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258)
07:16:54 at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87)
07:16:54 at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:84)
07:16:54 at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:73)
07:16:54 at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:867)
07:16:54 at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:851)
07:16:54 at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:855)
07:16:54 at ome.logic.UpdateImpl.internalMerge(UpdateImpl.java:313)
07:16:54 at ome.logic.UpdateImpl$2.run(UpdateImpl.java:138)
07:16:54 at ome.logic.UpdateImpl$2.run(UpdateImpl.java:135)
07:16:54 at ome.logic.UpdateImpl.doAction(UpdateImpl.java:357)
07:16:54 at ome.logic.UpdateImpl.doAction(UpdateImpl.java:349)
07:16:54 at ome.logic.UpdateImpl.saveAndReturnObject(UpdateImpl.java:135)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor614.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy100.saveAndReturnObject(Unknown Source)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor614.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy100.saveAndReturnObject(Unknown Source)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor692.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
07:16:54 at ome.services.throttling.Callback.run(Callback.java:56)
07:16:54 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
07:16:54 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
07:16:54 at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:62)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor691.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy101.saveAndReturnObject_async(Unknown Source)
07:16:54 at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92)
07:16:54 at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:229)
07:16:54 at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:423)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.ApiUsageException
07:16:54 message = No valid permissions available! DUMMY permissions are not intended for copying. Make sure that you have not passed omero.group=-1 for a save without context
07:16:54 }
07:16:54 FAILED test/integration/test_permissions.py::TestPermissions::testSaveBadLink - omero.SecurityViolation: exception ::omero::SecurityViolation
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.SecurityViolation: You are not authorized to set the ExperimenterGroup for ome.model.annotations.TagAnnotation:Id_41635 to ome.model.meta.ExperimenterGroup:Id_3678
07:16:54 at ome.security.basic.OmeroInterceptor.newTransientDetails(OmeroInterceptor.java:785)
07:16:54 at ome.security.basic.OmeroInterceptor.onSave(OmeroInterceptor.java:187)
07:16:54 at org.hibernate.event.def.AbstractSaveEventListener.substituteValuesIfNecessary(AbstractSaveEventListener.java:413)
07:16:54 at org.hibernate.event.def.AbstractSaveEventListener.performSaveOrReplicate(AbstractSaveEventListener.java:292)
07:16:54 at org.hibernate.event.def.AbstractSaveEventListener.performSave(AbstractSaveEventListener.java:203)
07:16:54 at org.hibernate.event.def.AbstractSaveEventListener.saveWithGeneratedId(AbstractSaveEventListener.java:143)
07:16:54 at org.hibernate.event.def.DefaultMergeEventListener.saveTransientEntity(DefaultMergeEventListener.java:415)
07:16:54 at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:341)
07:16:54 at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303)
07:16:54 at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62)
07:16:54 at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154)
07:16:54 at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258)
07:16:54 at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87)
07:16:54 at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:877)
07:16:54 at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:859)
07:16:54 at org.hibernate.engine.CascadingAction$6.cascade(CascadingAction.java:279)
07:16:54 at org.hibernate.engine.Cascade.cascadeToOne(Cascade.java:392)
07:16:54 at org.hibernate.engine.Cascade.cascadeAssociation(Cascade.java:335)
07:16:54 at org.hibernate.engine.Cascade.cascadeProperty(Cascade.java:204)
07:16:54 at org.hibernate.engine.Cascade.cascade(Cascade.java:161)
07:16:54 at org.hibernate.event.def.AbstractSaveEventListener.cascadeBeforeSave(AbstractSaveEventListener.java:450)
07:16:54 at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:336)
07:16:54 at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303)
07:16:54 at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62)
07:16:54 at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154)
07:16:54 at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258)
07:16:54 at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87)
07:16:54 at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:877)
07:16:54 at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:859)
07:16:54 at org.hibernate.engine.CascadingAction$6.cascade(CascadingAction.java:279)
07:16:54 at org.hibernate.engine.Cascade.cascadeToOne(Cascade.java:392)
07:16:54 at org.hibernate.engine.Cascade.cascadeAssociation(Cascade.java:335)
07:16:54 at org.hibernate.engine.Cascade.cascadeProperty(Cascade.java:204)
07:16:54 at org.hibernate.engine.Cascade.cascadeCollectionElements(Cascade.java:425)
07:16:54 at org.hibernate.engine.Cascade.cascadeCollection(Cascade.java:362)
07:16:54 at org.hibernate.engine.Cascade.cascadeAssociation(Cascade.java:338)
07:16:54 at org.hibernate.engine.Cascade.cascadeProperty(Cascade.java:204)
07:16:54 at org.hibernate.engine.Cascade.cascade(Cascade.java:161)
07:16:54 at org.hibernate.event.def.AbstractSaveEventListener.cascadeAfterSave(AbstractSaveEventListener.java:475)
07:16:54 at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:388)
07:16:54 at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303)
07:16:54 at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62)
07:16:54 at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154)
07:16:54 at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258)
07:16:54 at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87)
07:16:54 at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:84)
07:16:54 at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:73)
07:16:54 at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:867)
07:16:54 at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:851)
07:16:54 at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:855)
07:16:54 at ome.logic.UpdateImpl.internalMerge(UpdateImpl.java:313)
07:16:54 at ome.logic.UpdateImpl$2.run(UpdateImpl.java:138)
07:16:54 at ome.logic.UpdateImpl$2.run(UpdateImpl.java:135)
07:16:54 at ome.logic.UpdateImpl.doAction(UpdateImpl.java:357)
07:16:54 at ome.logic.UpdateImpl.doAction(UpdateImpl.java:349)
07:16:54 at ome.logic.UpdateImpl.saveAndReturnObject(UpdateImpl.java:135)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor614.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy100.saveAndReturnObject(Unknown Source)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor614.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy100.saveAndReturnObject(Unknown Source)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor692.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
07:16:54 at ome.services.throttling.Callback.run(Callback.java:56)
07:16:54 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
07:16:54 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
07:16:54 at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:62)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor691.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy101.saveAndReturnObject_async(Unknown Source)
07:16:54 at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92)
07:16:54 at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:229)
07:16:54 at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:423)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.SecurityViolation
07:16:54 message = You are not authorized to set the ExperimenterGroup for ome.model.annotations.TagAnnotation:Id_41635 to ome.model.meta.ExperimenterGroup:Id_3678
07:16:54 }
07:16:54 FAILED test/integration/test_permissions.py::TestPermissions::testUseOfRawFileBeanScriptReadCorrectGroupAndUser - Ice.UnknownException: exception ::Ice::UnknownException
07:16:54 {
07:16:54 unknown = ome.conditions.SecurityViolation: User 4735 is not an admin and so cannot set uid to 0
07:16:54 at ome.security.basic.BasicEventContext.checkAndInitialize(BasicEventContext.java:141)
07:16:54 at ome.security.basic.CurrentDetails.checkAndInitialize(CurrentDetails.java:317)
07:16:54 at ome.security.basic.BasicSecuritySystem.loadEventContext(BasicSecuritySystem.java:449)
07:16:54 at ome.security.basic.EventHandler.doLogin(EventHandler.java:210)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:146)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy74.doWork(Unknown Source)
07:16:54 at ome.services.util.Executor$Impl.execute(Executor.java:447)
07:16:54 at ome.services.blitz.repo.RepositoryDaoImpl.getFile(RepositoryDaoImpl.java:866)
07:16:54 at ome.services.blitz.repo.PublicRepositoryI.checkId(PublicRepositoryI.java:823)
07:16:54 at ome.services.blitz.repo.PublicRepositoryI.fileById(PublicRepositoryI.java:367)
07:16:54 at omero.grid._RepositoryTie.fileById(_RepositoryTie.java:78)
07:16:54 at omero.grid._RepositoryDisp.___fileById(_RepositoryDisp.java:393)
07:16:54 at omero.grid._RepositoryDisp.__dispatch(_RepositoryDisp.java:538)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 }
07:16:54 FAILED test/integration/test_rawfilestore.py::TestRFS::testTicket1961Basic - AssertionError: assert '' != ''
07:16:54 + where '' = object #0 (::omero::RString)\n{\n _val = \n}.val
07:16:54 + where object #0 (::omero::RString)\n{\n _val = \n} = object #0 (::omero::model::OriginalFile)\n{\n _id = object #1 (::omero::RLong)\n {\n _val = 6208\n }\n _details = object #2 (::omero::model::Details)\n {\n _owner = object #3 (::omero::model::Experimenter)\n {\n _id = object #4 (::omero::RLong)\n {\n _val = 4736\n }\n _details = <nil>\n _loaded = False\n _version = <nil>\n _groupExperimenterMapSeq = \n {\n }\n _groupExperimenterMapLoaded = False\n _omeName = <nil>\n _firstName = <nil>\n _middleName = <nil>\n _lastName = <nil>\n _institution = <nil>\n _ldap = <nil>\n _email = <nil>\n _config = \n {\n }\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n }\n _group = object #5 (::omero::model::ExperimenterGroup)\n {\n _id = object #6 (::omero::RLong)\n {\n _val = 3680\n }\n _details = object #7 (::... }\n groupPermissions = object #20 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -120\n }\n }\n }\n _loaded = True\n _version = <nil>\n _pixelsFileMapsSeq = \n {\n }\n _pixelsFileMapsLoaded = False\n _pixelsFileMapsCountPerOwner = \n {\n }\n _path = object #21 (::omero::RString)\n {\n _val = /tmp/test\n }\n _repo = <nil>\n _size = object #22 (::omero::RLong)\n {\n _val = 4\n }\n _atime = <nil>\n _mtime = object #23 (::omero::RTime)\n {\n _val = 1730013316521\n }\n _ctime = <nil>\n _hasher = <nil>\n _hash = object #24 (::omero::RString)\n {\n _val = \n }\n _mimetype = object #25 (::omero::RString)\n {\n _val = application/octet-stream\n }\n _filesetEntriesSeq = \n {\n }\n _filesetEntriesLoaded = True\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n _name = object #26 (::omero::RString)\n {\n _val = test\n }\n}.hash
07:16:54 FAILED test/integration/test_rawfilestore.py::TestRFS::testTicket1961WithKillSession - AssertionError: assert '' != ''
07:16:54 + where '' = object #0 (::omero::RString)\n{\n _val = \n}.val
07:16:54 + where object #0 (::omero::RString)\n{\n _val = \n} = object #0 (::omero::model::OriginalFile)\n{\n _id = object #1 (::omero::RLong)\n {\n _val = 6209\n }\n _details = object #2 (::omero::model::Details)\n {\n _owner = object #3 (::omero::model::Experimenter)\n {\n _id = object #4 (::omero::RLong)\n {\n _val = 4736\n }\n _details = <nil>\n _loaded = False\n _version = <nil>\n _groupExperimenterMapSeq = \n {\n }\n _groupExperimenterMapLoaded = False\n _omeName = <nil>\n _firstName = <nil>\n _middleName = <nil>\n _lastName = <nil>\n _institution = <nil>\n _ldap = <nil>\n _email = <nil>\n _config = \n {\n }\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n }\n _group = object #5 (::omero::model::ExperimenterGroup)\n {\n _id = object #6 (::omero::RLong)\n {\n _val = 3680\n }\n _details = object #7 (::... }\n groupPermissions = object #20 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -120\n }\n }\n }\n _loaded = True\n _version = <nil>\n _pixelsFileMapsSeq = \n {\n }\n _pixelsFileMapsLoaded = False\n _pixelsFileMapsCountPerOwner = \n {\n }\n _path = object #21 (::omero::RString)\n {\n _val = /tmp/test\n }\n _repo = <nil>\n _size = object #22 (::omero::RLong)\n {\n _val = 4\n }\n _atime = <nil>\n _mtime = object #23 (::omero::RTime)\n {\n _val = 1730013316591\n }\n _ctime = <nil>\n _hasher = <nil>\n _hash = object #24 (::omero::RString)\n {\n _val = \n }\n _mimetype = object #25 (::omero::RString)\n {\n _val = application/octet-stream\n }\n _filesetEntriesSeq = \n {\n }\n _filesetEntriesLoaded = True\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n _name = object #26 (::omero::RString)\n {\n _val = test\n }\n}.hash
07:16:54 FAILED test/integration/test_rawfilestore.py::TestRFS::testTicket2161Save - AssertionError: assert '' != ''
07:16:54 + where '' = object #0 (::omero::RString)\n{\n _val = \n}.val
07:16:54 + where object #0 (::omero::RString)\n{\n _val = \n} = object #0 (::omero::model::OriginalFile)\n{\n _id = object #1 (::omero::RLong)\n {\n _val = 6210\n }\n _details = object #2 (::omero::model::Details)\n {\n _owner = object #3 (::omero::model::Experimenter)\n {\n _id = object #4 (::omero::RLong)\n {\n _val = 4736\n }\n _details = <nil>\n _loaded = False\n _version = <nil>\n _groupExperimenterMapSeq = \n {\n }\n _groupExperimenterMapLoaded = False\n _omeName = <nil>\n _firstName = <nil>\n _middleName = <nil>\n _lastName = <nil>\n _institution = <nil>\n _ldap = <nil>\n _email = <nil>\n _config = \n {\n }\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n }\n _group = object #5 (::omero::model::ExperimenterGroup)\n {\n _id = object #6 (::omero::RLong)\n {\n _val = 3680\n }\n _details = object #7 (::... }\n groupPermissions = object #20 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -120\n }\n }\n }\n _loaded = True\n _version = <nil>\n _pixelsFileMapsSeq = \n {\n }\n _pixelsFileMapsLoaded = False\n _pixelsFileMapsCountPerOwner = \n {\n }\n _path = object #21 (::omero::RString)\n {\n _val = /tmp/test\n }\n _repo = <nil>\n _size = object #22 (::omero::RLong)\n {\n _val = 4\n }\n _atime = <nil>\n _mtime = object #23 (::omero::RTime)\n {\n _val = 1730013316628\n }\n _ctime = <nil>\n _hasher = <nil>\n _hash = object #24 (::omero::RString)\n {\n _val = \n }\n _mimetype = object #25 (::omero::RString)\n {\n _val = application/octet-stream\n }\n _filesetEntriesSeq = \n {\n }\n _filesetEntriesLoaded = True\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n _name = object #26 (::omero::RString)\n {\n _val = test\n }\n}.hash
07:16:54 FAILED test/integration/test_rawfilestore.py::TestRFS::testNoWrite - AssertionError: assert '' != ''
07:16:54 + where '' = object #0 (::omero::RString)\n{\n _val = \n}.val
07:16:54 + where object #0 (::omero::RString)\n{\n _val = \n} = object #0 (::omero::model::OriginalFile)\n{\n _id = object #1 (::omero::RLong)\n {\n _val = 6211\n }\n _details = object #2 (::omero::model::Details)\n {\n _owner = object #3 (::omero::model::Experimenter)\n {\n _id = object #4 (::omero::RLong)\n {\n _val = 4737\n }\n _details = <nil>\n _loaded = False\n _version = <nil>\n _groupExperimenterMapSeq = \n {\n }\n _groupExperimenterMapLoaded = False\n _omeName = <nil>\n _firstName = <nil>\n _middleName = <nil>\n _lastName = <nil>\n _institution = <nil>\n _ldap = <nil>\n _email = <nil>\n _config = \n {\n }\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n }\n _group = object #5 (::omero::model::ExperimenterGroup)\n {\n _id = object #6 (::omero::RLong)\n {\n _val = 3681\n }\n _details = object #7 (::... }\n groupPermissions = object #20 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -56\n }\n }\n }\n _loaded = True\n _version = <nil>\n _pixelsFileMapsSeq = \n {\n }\n _pixelsFileMapsLoaded = False\n _pixelsFileMapsCountPerOwner = \n {\n }\n _path = object #21 (::omero::RString)\n {\n _val = /tmp/test\n }\n _repo = <nil>\n _size = object #22 (::omero::RLong)\n {\n _val = 4\n }\n _atime = <nil>\n _mtime = object #23 (::omero::RTime)\n {\n _val = 1730013321764\n }\n _ctime = <nil>\n _hasher = <nil>\n _hash = object #24 (::omero::RString)\n {\n _val = \n }\n _mimetype = object #25 (::omero::RString)\n {\n _val = application/octet-stream\n }\n _filesetEntriesSeq = \n {\n }\n _filesetEntriesLoaded = True\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n _name = object #26 (::omero::RString)\n {\n _val = test\n }\n}.hash
07:16:54 FAILED test/integration/test_reporawfilestore.py::TestRepoRawFileStore::testFailedWriteNoFile - Failed: DID NOT RAISE <class 'omero.ResourceError'>
07:16:54 FAILED test/integration/test_scripts.py::TestScripts::testAutoFillTicket2326 - omero.NoProcessorAvailable: exception ::omero::NoProcessorAvailable
07:16:54 {
07:16:54 serverStackTrace =
07:16:54 serverExceptionClass =
07:16:54 message = No processor available! [0 response(s)]
07:16:54 processorCount = 0
07:16:54 }
07:16:54 FAILED test/integration/test_scripts.py::TestScripts::testParamLoadingPerformanceTicket2285 - omero.ValidationException: exception ::omero::ValidationException
07:16:54 {
07:16:54 serverStackTrace =
07:16:54 serverExceptionClass =
07:16:54 message = Invalid parameters:
07:16:54 WRONG TYPE for "a": <class 'omero.rtypes.RIntI'> != <class 'omero.rtypes.RLongI'>
07:16:54 }
07:16:54 FAILED test/integration/test_scripts.py::TestScripts::test3527 - omero.NoProcessorAvailable: exception ::omero::NoProcessorAvailable
07:16:54 {
07:16:54 serverStackTrace =
07:16:54 serverExceptionClass =
07:16:54 message = No processor available! [0 response(s)]
07:16:54 processorCount = 0
07:16:54 }
07:16:54 FAILED test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testPrivate10618RootWithNoCtx - omero.ResourceError: exception ::omero::ResourceError
07:16:54 {
07:16:54 serverStackTrace = ome.conditions.ResourceError: Error retrieving Pixels id:2901. Pixels set does not exist or the user id:0 has insufficient permissions to retrieve it.
07:16:54 at ome.services.ThumbnailCtx.isExtendedGraphCritical(ThumbnailCtx.java:749)
07:16:54 at ome.services.ThumbnailCtx.createAndPrepareMissingRenderingSettings(ThumbnailCtx.java:388)
07:16:54 at ome.services.ThumbnailBean.getThumbnailByLongestSideSet(ThumbnailBean.java:1003)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor3888.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:216)
07:16:54 at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:200)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
07:16:54 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282)
07:16:54 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy113.getThumbnailByLongestSideSet(Unknown Source)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor3888.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy113.getThumbnailByLongestSideSet(Unknown Source)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor3893.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
07:16:54 at ome.services.throttling.Callback.run(Callback.java:56)
07:16:54 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
07:16:54 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
07:16:54 at ome.services.blitz.impl.ThumbnailStoreI.getThumbnailByLongestSideSet_async(ThumbnailStoreI.java:83)
07:16:54 at jdk.internal.reflect.GeneratedMethodAccessor3892.invoke(Unknown Source)
07:16:54 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
07:16:54 at java.base/java.lang.reflect.Method.invoke(Method.java:566)
07:16:54 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
07:16:54 at omero.cmd.CallContext.invoke(CallContext.java:85)
07:16:54 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
07:16:54 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
07:16:54 at com.sun.proxy.$Proxy114.getThumbnailByLongestSideSet_async(Unknown Source)
07:16:54 at omero.api._ThumbnailStoreTie.getThumbnailByLongestSideSet_async(_ThumbnailStoreTie.java:132)
07:16:54 at omero.api._ThumbnailStoreDisp.___getThumbnailByLongestSideSet(_ThumbnailStoreDisp.java:743)
07:16:54 at omero.api._ThumbnailStoreDisp.__dispatch(_ThumbnailStoreDisp.java:1088)
07:16:54 at IceInternal.Incoming.invoke(Incoming.java:221)
07:16:54 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
07:16:54 at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
07:16:54 at Ice.ConnectionI.message(ConnectionI.java:1056)
07:16:54 at IceInternal.ThreadPool.run(ThreadPool.java:395)
07:16:54 at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
07:16:54 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
07:16:54 at java.base/java.lang.Thread.run(Thread.java:829)
07:16:54 serverExceptionClass = ome.conditions.ResourceError
07:16:54 message = Error retrieving Pixels id:2901. Pixels set does not exist or the user id:0 has insufficient permissions to retrieve it.
07:16:54 }
07:16:54 FAILED test/integration/test_tickets2000.py::TestTickets2000::test1184 - AssertionError: Expected the test to complete in < 3 seconds, took: 11.036403
07:16:54 assert 11.036402940750122 < 3.0
07:16:54 ==== 33 failed, 3 passed, 2025 deselected, 12 warnings in 217.15s (0:03:37) ====
07:16:55 !! 10/27/24 07:16:54.862 error: 4 communicators not destroyed during global destruction.
07:16:55 Result: 1
07:16:55
07:16:55 BUILD SUCCESSFUL
07:16:55 Total time: 3 minutes 41 seconds
07:16:55 + /home/omero/workspace/OMERO-test-integration/src/build.py -f components/tools/OmeroJava/build.xml -Dtestng.useDefaultListeners=true -Dtestreports.dir=target/reports/broken broken
07:16:55 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
07:16:55 Buildfile: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/build.xml
07:16:55 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava...
07:16:55
07:16:55 testng-init:
07:16:55 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
07:16:55 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
07:17:01 07:17:01,267 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
07:17:01 07:17:01,269 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - No custom configurators were discovered as a service.
07:17:01 07:17:01,269 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
07:17:01 07:17:01,273 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
07:17:01 07:17:01,273 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
07:17:01 07:17:01,274 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
07:17:01 07:17:01,275 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
07:17:01 07:17:01,275 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
07:17:01 07:17:01,276 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
07:17:01 07:17:01,277 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
07:17:01 07:17:01,277 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml]
07:17:01 07:17:01,278 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@1b560eb0 - Resource [logback.xml] occurs multiple times on the classpath.
07:17:01 07:17:01,278 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@1b560eb0 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml]
07:17:01 07:17:01,278 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@1b560eb0 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
07:17:01 07:17:01,486 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
07:17:01 07:17:01,486 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
07:17:01 07:17:01,504 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
07:17:01 07:17:01,506 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@9e02f84 - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
07:17:01 07:17:01,506 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@9e02f84 - Please move "immediateFlush" property into the enclosing appender.
07:17:01 07:17:01,567 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@9e02f84 - Setting the "immediateFlush" property of the enclosing appender to true
07:17:01 07:17:01,568 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
07:17:01 07:17:01,568 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
07:17:01 07:17:01,568 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
07:17:01 07:17:01,568 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
07:17:01 07:17:01,568 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
07:17:01 07:17:01,568 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
07:17:01 07:17:01,569 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1e6060f1 - End of configuration.
07:17:01 07:17:01,571 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7e49ded - Registering current configuration as safe fallback point
07:17:01 07:17:01,571 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 295 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
07:17:01
07:17:01 lifecycle.test-compile:
07:17:01 Deleting: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/_omero_build_123544719.tmp
07:17:01 Deleting: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/OmeroJava-test.xml
07:17:01 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
07:17:01 :: delivering :: omero#OmeroJava-test;working@bdaf9f08f5d1 :: 5.6.3-513-85571adcc5-ice36-ice36 :: integration :: Sun Oct 27 07:16:55 UTC 2024
07:17:01 delivering ivy file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/OmeroJava-test.xml
07:17:01 :: publishing :: omero#OmeroJava-test
07:17:01 published OmeroJava-test to /home/omero/workspace/OMERO-test-integration/src/target/test-repository/OmeroJava-test-5.6.3-513-85571adcc5-ice36-ice36.jar
07:17:01 published ivy to /home/omero/workspace/OMERO-test-integration/src/target/test-repository/OmeroJava-test-5.6.3-513-85571adcc5-ice36-ice36.xml
07:17:01
07:17:01 broken:
07:17:01 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
07:17:02 07:17:02,101 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
07:17:02 07:17:02,103 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - No custom configurators were discovered as a service.
07:17:02 07:17:02,103 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
07:17:02 07:17:02,104 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
07:17:02 07:17:02,105 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
07:17:02 07:17:02,106 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
07:17:02 07:17:02,106 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
07:17:02 07:17:02,106 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
07:17:02 07:17:02,107 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
07:17:02 07:17:02,107 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
07:17:02 07:17:02,108 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml]
07:17:02 07:17:02,108 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@10e31a9a - Resource [logback.xml] occurs multiple times on the classpath.
07:17:02 07:17:02,108 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@10e31a9a - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml]
07:17:02 07:17:02,108 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@10e31a9a - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
07:17:02 07:17:02,293 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
07:17:02 07:17:02,293 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
07:17:02 07:17:02,299 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
07:17:02 07:17:02,301 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@131774fe - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
07:17:02 07:17:02,301 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@131774fe - Please move "immediateFlush" property into the enclosing appender.
07:17:02 07:17:02,325 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@131774fe - Setting the "immediateFlush" property of the enclosing appender to true
07:17:02 07:17:02,326 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
07:17:02 07:17:02,326 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
07:17:02 07:17:02,326 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
07:17:02 07:17:02,326 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
07:17:02 07:17:02,326 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
07:17:02 07:17:02,326 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
07:17:02 07:17:02,326 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@158d2680 - End of configuration.
07:17:02 07:17:02,327 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@77847718 - Registering current configuration as safe fallback point
07:17:02 07:17:02,327 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 220 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
07:17:03 Oct 27, 2024 7:17:03 AM ome.system.OmeroContext prepareRefresh
07:17:03 INFO: Refreshing ome.system.OmeroContext@9fec931: startup date [Sun Oct 27 07:17:03 UTC 2024]; root of context hierarchy
07:17:03 Oct 27, 2024 7:17:03 AM org.springframework.beans.factory.xml.XmlBeanDefinitionReader loadBeanDefinitions
07:17:03 INFO: Loading XML bean definitions from class path resource [ome/config.xml]
07:18:43 ===============================================
07:18:43 OmeroJava.integration
07:18:43 Total tests run: 43, Passes: 2, Failures: 41, Skips: 0
07:18:43 ===============================================
07:18:43 The tests failed.
07:18:43
07:18:43 BUILD SUCCESSFUL
07:18:43 Total time: 1 minute 48 seconds
07:18:43 + deactivate
07:18:43 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
07:18:43 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
07:18:43 + export PATH
07:18:43 + unset _OLD_VIRTUAL_PATH
07:18:43 + '[' -n '' ']'
07:18:43 + '[' -n /bin/bash -o -n '' ']'
07:18:43 + hash -r
07:18:43 + '[' -n '' ']'
07:18:43 + unset VIRTUAL_ENV
07:18:43 + '[' '!' '' = nondestructive ']'
07:18:43 + unset -f deactivate
07:18:43 Recording test results
07:18:44 [Checks API] No suitable checks publisher found.
07:18:44 Build step 'Publish JUnit test result report' changed build result to UNSTABLE
07:18:44 TestNG Reports Processing: START
07:18:44 Looking for TestNG results report in workspace using pattern: **/OmeroJava/target/reports/integration/*.xml
07:18:45 Saving reports...
07:18:45 Processing '/var/jenkins_home/jobs/OMERO-test-integration/builds/209/testng/testng-results-1.xml'
07:18:46 Processing '/var/jenkins_home/jobs/OMERO-test-integration/builds/209/testng/testng-results.xml'
07:18:46 0.038625% of tests failed, which exceeded threshold of 0%. Marking build as UNSTABLE
07:18:46 TestNG Reports Processing: FINISH
07:18:46 Finished: UNSTABLE
![[Jenkins]](/jenkins/static/9e710227/images/svgs/logo.svg){kind=logo}
