10:41:38 Started by user devspace
10:41:38 Running as SYSTEM
10:41:38 Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-test-integration
10:41:38 [OMERO-test-integration] $ /bin/bash -xe /tmp/jenkins4488712333470987103.sh
10:41:38 + rm -rf /home/omero/workspace/OMERO-test-integration/.venv3
10:41:39 + python3.11 -m venv /home/omero/workspace/OMERO-test-integration/.venv3
10:41:42 + source /home/omero/workspace/OMERO-test-integration/.venv3/bin/activate
10:41:42 ++ deactivate nondestructive
10:41:42 ++ '[' -n '' ']'
10:41:42 ++ '[' -n '' ']'
10:41:42 ++ hash -r
10:41:42 ++ '[' -n '' ']'
10:41:42 ++ unset VIRTUAL_ENV
10:41:42 ++ unset VIRTUAL_ENV_PROMPT
10:41:42 ++ '[' '!' nondestructive = nondestructive ']'
10:41:42 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-test-integration/.venv3
10:41:42 ++ export VIRTUAL_ENV
10:41:42 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
10:41:42 ++ PATH=/home/omero/workspace/OMERO-test-integration/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
10:41:42 ++ export PATH
10:41:42 ++ '[' -n '' ']'
10:41:42 ++ '[' -z '' ']'
10:41:42 ++ _OLD_VIRTUAL_PS1=
10:41:42 ++ PS1='(.venv3) '
10:41:42 ++ export PS1
10:41:42 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
10:41:42 ++ export VIRTUAL_ENV_PROMPT
10:41:42 ++ hash -r
10:41:42 + pip install -U pip setuptools
10:41:42 Requirement already satisfied: pip in ./.venv3/lib64/python3.11/site-packages (22.3.1)
10:41:42 Collecting pip
10:41:42 Using cached pip-25.3-py3-none-any.whl (1.8 MB)
10:41:42 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (65.5.1)
10:41:43 Collecting setuptools
10:41:43 Using cached setuptools-80.9.0-py3-none-any.whl (1.2 MB)
10:41:43 Installing collected packages: setuptools, pip
10:41:43 Attempting uninstall: setuptools
10:41:43 Found existing installation: setuptools 65.5.1
10:41:43 Uninstalling setuptools-65.5.1:
10:41:43 Successfully uninstalled setuptools-65.5.1
10:41:44 Attempting uninstall: pip
10:41:44 Found existing installation: pip 22.3.1
10:41:44 Uninstalling pip-22.3.1:
10:41:44 Successfully uninstalled pip-22.3.1
10:41:45 Successfully installed pip-25.3 setuptools-80.9.0
10:41:45 + pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl
10:41:45 Collecting zeroc-ice==3.6.5
10:41:46 Downloading https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
10:41:47 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 22.2 MB/s 0:00:01
10:41:47 Installing collected packages: zeroc-ice
10:41:48 Successfully installed zeroc-ice-3.6.5
10:41:48 + pip install markdown
10:41:49 Collecting markdown
10:41:49 Using cached markdown-3.10-py3-none-any.whl.metadata (5.1 kB)
10:41:49 Using cached markdown-3.10-py3-none-any.whl (107 kB)
10:41:49 Installing collected packages: markdown
10:41:49 Successfully installed markdown-3.10
10:41:49 + pip install mox3 pytest pytest-django pytest-xdist pytest-mock
10:41:49 Collecting mox3
10:41:49 Using cached mox3-1.1.0-py3-none-any.whl.metadata (3.2 kB)
10:41:49 Collecting pytest
10:41:49 Using cached pytest-9.0.2-py3-none-any.whl.metadata (7.6 kB)
10:41:49 Collecting pytest-django
10:41:49 Using cached pytest_django-4.11.1-py3-none-any.whl.metadata (8.3 kB)
10:41:49 Collecting pytest-xdist
10:41:49 Using cached pytest_xdist-3.8.0-py3-none-any.whl.metadata (3.0 kB)
10:41:49 Collecting pytest-mock
10:41:49 Using cached pytest_mock-3.15.1-py3-none-any.whl.metadata (3.9 kB)
10:41:49 Collecting pbr!=2.1.0,>=2.0.0 (from mox3)
10:41:49 Using cached pbr-7.0.3-py2.py3-none-any.whl.metadata (3.8 kB)
10:41:49 Collecting fixtures>=3.0.0 (from mox3)
10:41:49 Using cached fixtures-4.2.8-py3-none-any.whl.metadata (22 kB)
10:41:49 Collecting iniconfig>=1.0.1 (from pytest)
10:41:49 Using cached iniconfig-2.3.0-py3-none-any.whl.metadata (2.5 kB)
10:41:50 Collecting packaging>=22 (from pytest)
10:41:50 Using cached packaging-25.0-py3-none-any.whl.metadata (3.3 kB)
10:41:50 Collecting pluggy<2,>=1.5 (from pytest)
10:41:50 Using cached pluggy-1.6.0-py3-none-any.whl.metadata (4.8 kB)
10:41:50 Collecting pygments>=2.7.2 (from pytest)
10:41:50 Using cached pygments-2.19.2-py3-none-any.whl.metadata (2.5 kB)
10:41:50 Collecting execnet>=2.1 (from pytest-xdist)
10:41:50 Using cached execnet-2.1.2-py3-none-any.whl.metadata (2.9 kB)
10:41:50 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from pbr!=2.1.0,>=2.0.0->mox3) (80.9.0)
10:41:50 Using cached mox3-1.1.0-py3-none-any.whl (43 kB)
10:41:50 Using cached pytest-9.0.2-py3-none-any.whl (374 kB)
10:41:50 Using cached pluggy-1.6.0-py3-none-any.whl (20 kB)
10:41:50 Using cached pytest_django-4.11.1-py3-none-any.whl (25 kB)
10:41:50 Using cached pytest_xdist-3.8.0-py3-none-any.whl (46 kB)
10:41:50 Using cached pytest_mock-3.15.1-py3-none-any.whl (10 kB)
10:41:50 Using cached execnet-2.1.2-py3-none-any.whl (40 kB)
10:41:50 Using cached fixtures-4.2.8-py3-none-any.whl (40 kB)
10:41:50 Using cached iniconfig-2.3.0-py3-none-any.whl (7.5 kB)
10:41:50 Using cached packaging-25.0-py3-none-any.whl (66 kB)
10:41:50 Using cached pbr-7.0.3-py2.py3-none-any.whl (131 kB)
10:41:50 Using cached pygments-2.19.2-py3-none-any.whl (1.2 MB)
10:41:50 Installing collected packages: pygments, pluggy, pbr, packaging, iniconfig, fixtures, execnet, pytest, mox3, pytest-xdist, pytest-mock, pytest-django
10:41:51
10:41:51 Successfully installed execnet-2.1.2 fixtures-4.2.8 iniconfig-2.3.0 mox3-1.1.0 packaging-25.0 pbr-7.0.3 pluggy-1.6.0 pygments-2.19.2 pytest-9.0.2 pytest-django-4.11.1 pytest-mock-3.15.1 pytest-xdist-3.8.0
10:41:51 + pip install tables
10:41:51 Collecting tables
10:41:51 Using cached tables-3.10.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.0 kB)
10:41:52 Collecting numpy>=1.20.0 (from tables)
10:41:52 Using cached numpy-2.4.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (6.6 kB)
10:41:52 Collecting numexpr>=2.6.2 (from tables)
10:41:52 Using cached numexpr-2.14.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (9.0 kB)
10:41:52 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from tables) (25.0)
10:41:52 Collecting py-cpuinfo (from tables)
10:41:52 Using cached py_cpuinfo-9.0.0-py3-none-any.whl.metadata (794 bytes)
10:41:53 Collecting blosc2>=2.3.0 (from tables)
10:41:53 Using cached blosc2-3.12.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (7.1 kB)
10:41:53 Collecting typing-extensions>=4.4.0 (from tables)
10:41:53 Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB)
10:41:53 Collecting ndindex (from blosc2>=2.3.0->tables)
10:41:53 Using cached ndindex-1.10.1-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (3.6 kB)
10:41:53 Collecting msgpack (from blosc2>=2.3.0->tables)
10:41:53 Using cached msgpack-1.1.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (8.1 kB)
10:41:53 Collecting platformdirs (from blosc2>=2.3.0->tables)
10:41:53 Using cached platformdirs-4.5.1-py3-none-any.whl.metadata (12 kB)
10:41:53 Collecting requests (from blosc2>=2.3.0->tables)
10:41:53 Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB)
10:41:53 Collecting charset_normalizer<4,>=2 (from requests->blosc2>=2.3.0->tables)
10:41:53 Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (37 kB)
10:41:53 Collecting idna<4,>=2.5 (from requests->blosc2>=2.3.0->tables)
10:41:53 Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB)
10:41:53 Collecting urllib3<3,>=1.21.1 (from requests->blosc2>=2.3.0->tables)
10:41:53 Using cached urllib3-2.6.3-py3-none-any.whl.metadata (6.9 kB)
10:41:54 Collecting certifi>=2017.4.17 (from requests->blosc2>=2.3.0->tables)
10:41:54 Using cached certifi-2026.1.4-py3-none-any.whl.metadata (2.5 kB)
10:41:54 Using cached tables-3.10.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (7.5 MB)
10:41:54 Using cached blosc2-3.12.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (4.5 MB)
10:41:54 Using cached numexpr-2.14.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (442 kB)
10:41:54 Using cached numpy-2.4.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.7 MB)
10:41:54 Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB)
10:41:54 Using cached msgpack-1.1.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (426 kB)
10:41:54 Using cached ndindex-1.10.1-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (516 kB)
10:41:54 Using cached platformdirs-4.5.1-py3-none-any.whl (18 kB)
10:41:54 Using cached py_cpuinfo-9.0.0-py3-none-any.whl (22 kB)
10:41:54 Using cached requests-2.32.5-py3-none-any.whl (64 kB)
10:41:54 Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (151 kB)
10:41:54 Using cached idna-3.11-py3-none-any.whl (71 kB)
10:41:54 Using cached urllib3-2.6.3-py3-none-any.whl (131 kB)
10:41:54 Using cached certifi-2026.1.4-py3-none-any.whl (152 kB)
10:41:54 Installing collected packages: py-cpuinfo, urllib3, typing-extensions, platformdirs, numpy, ndindex, msgpack, idna, charset_normalizer, certifi, requests, numexpr, blosc2, tables
10:41:57
10:41:57 Successfully installed blosc2-3.12.2 certifi-2026.1.4 charset_normalizer-3.4.4 idna-3.11 msgpack-1.1.2 ndindex-1.10.1 numexpr-2.14.1 numpy-2.4.1 platformdirs-4.5.1 py-cpuinfo-9.0.0 requests-2.32.5 tables-3.10.2 typing-extensions-4.15.0 urllib3-2.6.3
10:41:57 + pip install jinja2
10:41:57 Collecting jinja2
10:41:57 Using cached jinja2-3.1.6-py3-none-any.whl.metadata (2.9 kB)
10:41:57 Collecting MarkupSafe>=2.0 (from jinja2)
10:41:57 Using cached markupsafe-3.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.7 kB)
10:41:57 Using cached jinja2-3.1.6-py3-none-any.whl (134 kB)
10:41:57 Using cached markupsafe-3.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (22 kB)
10:41:57 Installing collected packages: MarkupSafe, jinja2
10:41:58
10:41:58 Successfully installed MarkupSafe-3.0.3 jinja2-3.1.6
10:41:58 + pip install PyYAML
10:41:58 Collecting PyYAML
10:41:58 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB)
10:41:58 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
10:41:58 Installing collected packages: PyYAML
10:41:58 Successfully installed PyYAML-6.0.3
10:41:58 + pip install omero-py omero-web
10:41:59 Collecting omero-py
10:41:59 Using cached omero_py-5.21.3-py3-none-any.whl.metadata (6.5 kB)
10:41:59 Collecting omero-web
10:41:59 Using cached omero_web-5.30.1-py3-none-any.whl.metadata (8.2 kB)
10:41:59 Collecting appdirs (from omero-py)
10:41:59 Using cached appdirs-1.4.4-py2.py3-none-any.whl.metadata (9.0 kB)
10:41:59 Collecting future (from omero-py)
10:41:59 Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
10:41:59 Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (2.4.1)
10:41:59 Collecting Pillow>=10.0.0 (from omero-py)
10:41:59 Using cached pillow-12.1.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (8.8 kB)
10:41:59 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py) (6.0.3)
10:41:59 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (3.6.5)
10:41:59 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py) (2.32.5)
10:41:59 Collecting portalocker (from omero-py)
10:41:59 Using cached portalocker-3.2.0-py3-none-any.whl.metadata (8.7 kB)
10:41:59 Collecting concurrent-log-handler>=0.9.20 (from omero-web)
10:41:59 Using cached concurrent_log_handler-0.9.28-py3-none-any.whl.metadata (23 kB)
10:41:59 Collecting Django<5.3,>=4.2.25 (from omero-web)
10:41:59 Using cached django-5.2.10-py3-none-any.whl.metadata (4.1 kB)
10:41:59 Collecting django-pipeline (from omero-web)
10:41:59 Using cached django_pipeline-4.1.0-py3-none-any.whl.metadata (5.9 kB)
10:41:59 Collecting django-cors-headers==3.7.0 (from omero-web)
10:41:59 Using cached django_cors_headers-3.7.0-py3-none-any.whl.metadata (15 kB)
10:41:59 Collecting whitenoise>=5.3.0 (from omero-web)
10:41:59 Using cached whitenoise-6.11.0-py3-none-any.whl.metadata (3.7 kB)
10:41:59 Collecting gunicorn>=19.3 (from omero-web)
10:41:59 Using cached gunicorn-23.0.0-py3-none-any.whl.metadata (4.4 kB)
10:41:59 Collecting omero-marshal>=0.7.0 (from omero-web)
10:41:59 Using cached omero_marshal-0.9.1-py3-none-any.whl.metadata (2.4 kB)
10:41:59 Collecting pytz (from omero-web)
10:41:59 Using cached pytz-2025.2-py2.py3-none-any.whl.metadata (22 kB)
10:41:59 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web) (25.0)
10:41:59 Collecting importlib-resources (from omero-web)
10:41:59 Using cached importlib_resources-6.5.2-py3-none-any.whl.metadata (3.9 kB)
10:42:00 Collecting asgiref>=3.8.1 (from Django<5.3,>=4.2.25->omero-web)
10:42:00 Using cached asgiref-3.11.0-py3-none-any.whl.metadata (9.3 kB)
10:42:00 Collecting sqlparse>=0.3.1 (from Django<5.3,>=4.2.25->omero-web)
10:42:00 Using cached sqlparse-0.5.5-py3-none-any.whl.metadata (4.7 kB)
10:42:00 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web) (80.9.0)
10:42:00 Collecting wheel (from django-pipeline->omero-web)
10:42:00 Using cached wheel-0.45.1-py3-none-any.whl.metadata (2.3 kB)
10:42:00 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (3.4.4)
10:42:00 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (3.11)
10:42:00 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (2.6.3)
10:42:00 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (2026.1.4)
10:42:00 Using cached omero_py-5.21.3-py3-none-any.whl (2.8 MB)
10:42:00 Using cached omero_web-5.30.1-py3-none-any.whl (2.8 MB)
10:42:00 Using cached django_cors_headers-3.7.0-py3-none-any.whl (12 kB)
10:42:00 Using cached django-5.2.10-py3-none-any.whl (8.3 MB)
10:42:00 Using cached asgiref-3.11.0-py3-none-any.whl (24 kB)
10:42:00 Using cached concurrent_log_handler-0.9.28-py3-none-any.whl (28 kB)
10:42:00 Using cached gunicorn-23.0.0-py3-none-any.whl (85 kB)
10:42:00 Using cached omero_marshal-0.9.1-py3-none-any.whl (88 kB)
10:42:00 Using cached pillow-12.1.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (7.0 MB)
10:42:00 Using cached portalocker-3.2.0-py3-none-any.whl (22 kB)
10:42:00 Using cached sqlparse-0.5.5-py3-none-any.whl (46 kB)
10:42:00 Using cached whitenoise-6.11.0-py3-none-any.whl (20 kB)
10:42:00 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
10:42:00 Using cached django_pipeline-4.1.0-py3-none-any.whl (75 kB)
10:42:00 Using cached future-1.0.0-py3-none-any.whl (491 kB)
10:42:00 Using cached importlib_resources-6.5.2-py3-none-any.whl (37 kB)
10:42:00 Using cached pytz-2025.2-py2.py3-none-any.whl (509 kB)
10:42:00 Using cached wheel-0.45.1-py3-none-any.whl (72 kB)
10:42:00 Installing collected packages: pytz, appdirs, whitenoise, wheel, sqlparse, portalocker, Pillow, omero-marshal, importlib-resources, gunicorn, future, asgiref, omero-py, django-pipeline, Django, concurrent-log-handler, django-cors-headers, omero-web
10:42:05
10:42:05 Successfully installed Django-5.2.10 Pillow-12.1.0 appdirs-1.4.4 asgiref-3.11.0 concurrent-log-handler-0.9.28 django-cors-headers-3.7.0 django-pipeline-4.1.0 future-1.0.0 gunicorn-23.0.0 importlib-resources-6.5.2 omero-marshal-0.9.1 omero-py-5.21.3 omero-web-5.30.1 portalocker-3.2.0 pytz-2025.2 sqlparse-0.5.5 wheel-0.45.1 whitenoise-6.11.0
10:42:05 [OMERO-test-integration] $ /bin/bash -xe /tmp/jenkins10105144413212708300.sh
10:42:05 + source /home/settings.env
10:42:05 ++ OMERO_DB_HOST=pg
10:42:05 ++ OMERO_DB_USER=postgres
10:42:05 ++ OMERO_DB_PASS=
10:42:05 ++ OMERO_ROOT_PASS=omero
10:42:05 ++ OMERO_DATA_DIR=/OMERO
10:42:05 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
10:42:05 + OMERO_DB_NAME=OMERO-test-integration
10:42:05 + SRC=/home/omero/workspace/OMERO-test-integration/src
10:42:05 + OMERO_DIST=/home/omero/workspace/OMERO-test-integration/src/dist
10:42:05 + export OMERODIR=/home/omero/workspace/OMERO-test-integration/src/dist
10:42:05 + OMERODIR=/home/omero/workspace/OMERO-test-integration/src/dist
10:42:05 + '[' -e /home/omero/workspace/OMERO-test-integration/src/dist ']'
10:42:05 + source /home/omero/workspace/OMERO-test-integration/.venv3/bin/activate
10:42:05 ++ deactivate nondestructive
10:42:05 ++ '[' -n '' ']'
10:42:05 ++ '[' -n '' ']'
10:42:05 ++ hash -r
10:42:05 ++ '[' -n '' ']'
10:42:05 ++ unset VIRTUAL_ENV
10:42:05 ++ unset VIRTUAL_ENV_PROMPT
10:42:05 ++ '[' '!' nondestructive = nondestructive ']'
10:42:05 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-test-integration/.venv3
10:42:05 ++ export VIRTUAL_ENV
10:42:05 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
10:42:05 ++ PATH=/home/omero/workspace/OMERO-test-integration/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
10:42:05 ++ export PATH
10:42:05 ++ '[' -n '' ']'
10:42:05 ++ '[' -z '' ']'
10:42:05 ++ _OLD_VIRTUAL_PS1=
10:42:05 ++ PS1='(.venv3) '
10:42:05 ++ export PS1
10:42:05 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
10:42:05 ++ export VIRTUAL_ENV_PROMPT
10:42:05 ++ hash -r
10:42:05 + omero admin stop
10:42:06 Server not running
10:42:06 + echo not running
10:42:06 not running
10:42:06 + deactivate
10:42:06 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
10:42:06 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
10:42:06 + export PATH
10:42:06 + unset _OLD_VIRTUAL_PATH
10:42:06 + '[' -n '' ']'
10:42:06 + hash -r
10:42:06 + '[' -n '' ']'
10:42:06 + unset VIRTUAL_ENV
10:42:06 + unset VIRTUAL_ENV_PROMPT
10:42:06 + '[' '!' '' = nondestructive ']'
10:42:06 + unset -f deactivate
10:42:06 + sleep 5
10:42:11 + dropdb -f -h pg -U postgres OMERO-test-integration
10:42:11 + rm -rf /home/omero/workspace/OMERO-test-integration/config /home/omero/workspace/OMERO-test-integration/data /home/omero/workspace/OMERO-test-integration/omero-blitz-5.8.4-SNAPSHOT-python.zip /home/omero/workspace/OMERO-test-integration/omero_dropbox-5.7.1.dev0.tar.gz /home/omero/workspace/OMERO-test-integration/omero_marshal-0.9.2.dev0.tar.gz /home/omero/workspace/OMERO-test-integration/omero_py-5.22.0.dev0.tar.gz /home/omero/workspace/OMERO-test-integration/omero_scripts-5.9.2.dev0.tar.gz /home/omero/workspace/OMERO-test-integration/omero_web-5.30.2.dev0.tar.gz /home/omero/workspace/OMERO-test-integration/src /home/omero/workspace/OMERO-test-integration/version.properties
10:42:11 Copied 1 artifact from "OMERO-build" build number 19
10:42:12 Copied 5 artifacts from "OMERO-python-superbuild-build" build number 19
10:42:12 Copied 2 artifacts from "OMERO-build-build" build number 23
10:42:12 [OMERO-test-integration] $ /bin/bash -xe /tmp/jenkins2582515847117979172.sh
10:42:12 + source /home/settings.env
10:42:12 ++ OMERO_DB_HOST=pg
10:42:12 ++ OMERO_DB_USER=postgres
10:42:12 ++ OMERO_DB_PASS=
10:42:12 ++ OMERO_ROOT_PASS=omero
10:42:12 ++ OMERO_DATA_DIR=/OMERO
10:42:12 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
10:42:12 + export ZIP_FILE=/home/omero/workspace/OMERO-test-integration/omero-blitz-VERSION-python.zip
10:42:12 + ZIP_FILE=/home/omero/workspace/OMERO-test-integration/omero-blitz-VERSION-python.zip
10:42:12 + export VERSION_PROPERTIES=/home/omero/workspace/OMERO-test-integration/version.properties
10:42:12 + VERSION_PROPERTIES=/home/omero/workspace/OMERO-test-integration/version.properties
10:42:12 + OMERO_DB_NAME=OMERO-test-integration
10:42:12 + OMERO_DATA_DIR=/home/omero/workspace/OMERO-test-integration/data
10:42:12 + mkdir -p /home/omero/workspace/OMERO-test-integration/data
10:42:12 + SRC=/home/omero/workspace/OMERO-test-integration/src
10:42:12 ++ ls openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19.zip
10:42:12 + ZIP_SRC=openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19.zip
10:42:12 + unzip openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19.zip
10:42:12 Archive: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19.zip
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/.classpath-template
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/.github/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/.github/Pull_Request_Template.md
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/.github/workflows/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/.github/workflows/docker_build.yml
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/.github/workflows/release.yml
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/.github/workflows/source_build.yml
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/.github/workflows/update.yaml
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/.mailmap
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/.project
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/CMakeLists.txt
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/CONTRIBUTING.md
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/Dockerfile
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/LICENSE.txt
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/README.md
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/SUPPORT.md
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/build.bat
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/build.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/build.xml
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/antlib/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/antlib/.classpath
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/antlib/.project
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/antlib/resources/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/antlib/resources/excludebugs.xml
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/antlib/resources/global.xml
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/antlib/resources/hibernate.xml
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/antlib/resources/lifecycle.xml
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/antlib/resources/version.xml
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/antlib/scripts/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/antlib/scripts/parse_version
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/antlib/scripts/source-archive.py
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/build.xml
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/README.md
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/build.xml
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/plugins/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/plugins/robot.py
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/resources/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/resources/robot.template
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/resources/web/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/resources/web/annotation.txt
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/resources/web/login.txt
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/resources/web/thumbs.txt
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/resources/web/tree.txt
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/resources/web/webadmin.txt
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/resources/well_sample_posXY.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/robot_setup.sh
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/web/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/web/annotate_test.robot
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/web/center_right_panel_test.robot
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/web/create_scenario.robot
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/web/delete_test.robot
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/web/download_options_test.robot
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/web/filter_test.robot
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/web/forms_test.robot
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/web/history_test.robot
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/web/map_annotations_test.robot
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/web/post_copy_test.robot
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/web/post_cut_test.robot
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/web/post_drag_test.robot
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/web/post_manage_test.robot
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/web/rdef_test.robot
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/web/search.robot
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/web/search_annotation_test.robot
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/web/show_test.robot
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/web/spw_test.robot
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/web/tagging_test.robot
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/web/view_image.robot
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/web/webadmin_create_group_and_user.robot
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/web/webadmin_login.robot
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tests/ui/testcases/web/webadmin_user_settings.robot
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/CMakeLists.txt
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/cmake/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/cmake/CompilerChecks.cmake
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/cmake/FindIce.cmake
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/cmake/GTest.cmake
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/cmake/TemplateCmdConfig.cmake.in
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/cmake/TemplateConfig.cmake.in
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/cmake/TemplateShellConfig.cmake.in
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/cmake/Version.cmake
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/CHANGES
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/CMakeLists.txt
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/CONTRIBUTORS
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/LICENSE
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/README
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/cmake/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/cmake/internal_utils.cmake
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-death-test.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-message.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-param-test.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-param-test.h.pump
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-printers.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-spi.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-test-part.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-typed-test.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest_pred_impl.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest_prod.h
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-death-test-internal.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-filepath.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-internal.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-linked_ptr.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-param-util-generated.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-param-util-generated.h.pump
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-param-util.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-port.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-string.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-tuple.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-tuple.h.pump
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-type-util.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-type-util.h.pump
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/prime_tables.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample1.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample1.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample10_unittest.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample1_unittest.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample2.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample2.h
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10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample3-inl.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample3_unittest.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample4.cc
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10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample4_unittest.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample5_unittest.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample6_unittest.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample7_unittest.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample8_unittest.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample9_unittest.cc
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/scripts/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/scripts/fuse_gtest_files.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/scripts/gen_gtest_pred_impl.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/scripts/gtest-config.in
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/scripts/pump.py
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/scripts/test/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/scripts/test/Makefile
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/src/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-all.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-death-test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-filepath.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-internal-inl.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-port.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-printers.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-test-part.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-typed-test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest_main.cc
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-death-test_ex_test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-death-test_test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-filepath_test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-linked_ptr_test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-listener_test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-message_test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-options_test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-param-test2_test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-param-test_test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-param-test_test.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-port_test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-printers_test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-test-part_test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-tuple_test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-typed-test2_test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-typed-test_test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-typed-test_test.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-unittest-api_test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_all_test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_break_on_failure_unittest.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_break_on_failure_unittest_.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_catch_exceptions_test.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_catch_exceptions_test_.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_color_test.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_color_test_.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_env_var_test.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_env_var_test_.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_environment_test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_filter_unittest.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_filter_unittest_.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_help_test.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_help_test_.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_list_tests_unittest.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_list_tests_unittest_.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_main_unittest.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_no_test_unittest.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_output_test.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_output_test_.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_output_test_golden_lin.txt
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_pred_impl_unittest.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_premature_exit_test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_prod_test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_repeat_test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_shuffle_test.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_shuffle_test_.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_sole_header_test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_stress_test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_test_utils.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_throw_on_failure_ex_test.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_throw_on_failure_test.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_throw_on_failure_test_.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_uninitialized_test.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_uninitialized_test_.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_unittest.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_xml_outfile1_test_.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_xml_outfile2_test_.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_xml_outfiles_test.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_xml_output_unittest.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_xml_output_unittest_.cc
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_xml_test_utils.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/ext/gtest-1.7.0/test/production.cc
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10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/src/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/src/README.h
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/src/omero/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/src/omero/ClientErrors.cpp
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10:42:12 extracting: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/src/omero/IcePortPop.h
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/src/omero/IcePortPush.h
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10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/ResetPasswordTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/RoiServiceTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/RolesTests.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/ScriptServiceTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/TableTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/UpdateServiceTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/UpgradeCheckTest.java
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/chgrp/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/chgrp/AnnotationMoveTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveAndPermissionsTest.java
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10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveImageWithAcquisitionDataTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveImageWithRoiFromOtherUserTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveImageWithRoiTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/chgrp/MultiImageFilesetMoveTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/chgrp/RenderingSettingsMoveTest.java
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/chmod/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/chmod/PermissionsTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/chmod/RolesTest.java
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/chown/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/chown/PermissionsTest.java
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/delete/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/delete/AdditionalDeleteTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/delete/DeleteProjectedImageTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/delete/HierarchyDeleteTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/delete/MultiImageFilesetDeleteTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/delete/SpwDeleteTest.java
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/gateway/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/gateway/AdminFacilityTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/gateway/BrowseFacilityTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/gateway/DataManagerFacilityTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/gateway/GatewayTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/gateway/GatewayUsageTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/gateway/LoadFacilityTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/gateway/MetadataFacilityTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/gateway/ROIFacilityTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/gateway/RawDataFacilityTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/gateway/SearchFacilityTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/gateway/TablesFacilityTest.java
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/thumbnail/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/thumbnail/BatchLoadingTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/thumbnail/SingleFileTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/thumbnail/SkipThumbnailsPermissionsTest.java
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroJava/test/integration/thumbnail/Utils.java
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/bin/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/bin/omero
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/bin/omero.bat
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/bin/setpythonpath.bat
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/bin/winconfig.bat
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/build.xml
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/examples/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/examples/createSession.py
10:42:12 extracting: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/examples/load.omero
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/examples/projection_1.py
10:42:12 extracting: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/examples/submit.omero
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/examples/upload.omero
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/ice.config
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/ivy.xml
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/manualtests/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/manualtests/README.txt
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/manualtests/populate_roi_test.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/setup.py
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/
10:42:12 extracting: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/__init__.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/conftest.py
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/
10:42:12 extracting: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/__init__.py
10:42:12 extracting: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/client_ctors.cfg
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/clitest/
10:42:12 extracting: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/clitest/__init__.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/clitest/cli.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/clitest/test_admin.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/clitest/test_chgrp.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/clitest/test_chown.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/clitest/test_cleanse.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/clitest/test_db.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/clitest/test_delete.py
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10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/clitest/test_duplicate.py
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10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/clitest/test_group.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/clitest/test_import.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/clitest/test_import_bulk.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/clitest/test_ldap.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/clitest/test_metadata.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/clitest/test_obj.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/clitest/test_pyramids.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/clitest/test_script.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/clitest/test_search.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/clitest/test_sessions.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/clitest/test_tag.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/clitest/test_upload.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/clitest/test_user.py
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/fstest/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/fstest/test_rename.py
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/gatewaytest/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/gatewaytest/__init__.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/gatewaytest/test_annotation.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/gatewaytest/test_chgrp.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/gatewaytest/test_chmod.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/gatewaytest/test_chown.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/gatewaytest/test_config_service.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/gatewaytest/test_connection.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/gatewaytest/test_delete.py
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10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/gatewaytest/test_helpers.py
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10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/gatewaytest/test_image_wrapper.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/gatewaytest/test_missing_pyramid.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/gatewaytest/test_multi_group.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/gatewaytest/test_performance.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/gatewaytest/test_permissions.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/gatewaytest/test_pixels.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/gatewaytest/test_plate_wrapper.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/gatewaytest/test_rdefs.py
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10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/gatewaytest/test_ticket10618.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/gatewaytest/test_user.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/gatewaytest/test_wrapper.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/helpers.py
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/metadata/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/metadata/bulk_to_map_annotation_context.yml
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/metadata/bulk_to_map_annotation_context_ns.csv
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/metadata/bulk_to_map_annotation_context_ns.yml
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/metadata/bulk_to_map_annotation_context_ns2.yml
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/metadata/bulk_to_map_annotation_context_ns2_empty.yml
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/metadata/bulk_to_map_annotation_context_ns2_fail.yml
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/metadata/test_metadata_mapannotations.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/metadata/test_populate.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroPy/test/integration/metadata/test_pydict_text.py
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10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/3-3-2_rgb.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/cividis.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/fire.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/glasbey.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/glasbey_inverted.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/glow.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/grays.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/ice.lut
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/janelia/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/janelia/pup_br.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/janelia/pup_nr.lut
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/matplotlib/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/matplotlib/inferno.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/matplotlib/magma.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/matplotlib/plasma.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/matplotlib/viridis.lut
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/ncsa_paledit/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/ncsa_paledit/16_colors.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/ncsa_paledit/5_ramps.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/ncsa_paledit/6_shades.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/ncsa_paledit/blue_orange_icb.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/ncsa_paledit/brgbcmyw.lut
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10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/ncsa_paledit/royal.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/ncsa_paledit/sepia.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/ncsa_paledit/smart.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/ncsa_paledit/thal.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/ncsa_paledit/thallium.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/ncsa_paledit/unionjack.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/physics.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/red-green.lut
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/seaborn/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/seaborn/mako.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/seaborn/rocket.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/spectrum.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/thermal.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/turbo.lut
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/wcif/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/wcif/cyan_hot.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/wcif/green_fire_blue.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/wcif/hilo.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/wcif/ica.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/wcif/ica2.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/wcif/ica3.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/wcif/magenta_hot.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/wcif/orange_hot.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/wcif/rainbow_rgb.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/wcif/red_hot.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/luts/wcif/yellow_hot.lut
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/omero.class
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/setup.cfg
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/README.txt
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/misc/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/misc/Makefile
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/misc/current.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/misc/enums.py
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__1/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__1/OMERO3__7.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__10/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__10/OMERO3A__9.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__11/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__11/OMERO3A__10.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__11/OMERO3A__5.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__2/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__2/OMERO3A__1.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__3/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__3/OMERO3A__2.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__3/OMERO3__5.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__4/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__4/OMERO3A__3.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__4/OMERO3__5.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__5/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__5/OMERO3A__4.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__6/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__6/OMERO3A__5.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__7/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__7/OMERO3A__6.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__8/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__8/OMERO3A__6.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__9/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3A__9/OMERO3A__8.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3__4/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3__4/OMERO3__1.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3__5/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3__5/OMERO3__4.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3__6/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3__6/OMERO3__5.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3__7/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO3__7/OMERO3__6.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO4.1__0/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO4.1__0/OMERO4__0.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO4.2__0/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO4.2__0/OMERO4.1__0.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO4.2__0/t/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO4.2__0/t/OMERO4.1__0.py
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO4.2__0/t/OMERO4.1__0.test
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO4.3__0/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO4.3__0/OMERO4.2__0.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO4.3__0/omero-4.2-data-fix.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO4.4__0/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO4.4__0/OMERO4.1__0.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO4.4__0/OMERO4.3__0.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO4__0/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO4__0/OMERO3A__11.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.0__0/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-fix.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-list.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.0__0/OMERO4.4__0.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.1__1/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.1__1/OMERO5.0__0.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.1__1/OMERO5.1__0.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.2__0/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.2__0/OMERO5.1__1.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.3__0/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.3__0/OMERO5.2__0.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.3__0/delete-ns-orphans.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.3__0/reverse_shape_color_argb_to_rgba.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.4DEV__1/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.4DEV__2/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.4DEV__3/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql
10:42:12 creating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.4__0/
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.4__0/OMERO5.3__0.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.4__0/OMERO5.3__1.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.4__0/psql-footer.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.4__0/psql-header.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.4__0/schema.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/sql/psql/OMERO5.4__0/views.sql
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/test.xml
10:42:12 inflating: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/update_dependencies.sh
10:42:12 extracting: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/antlib/resources/gitversion.xml
10:42:12 extracting: openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19/components/tools/OmeroCpp/cmake/GitVersion.cmake
10:42:12 + rm -f openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19.zip
10:42:12 + mv /home/omero/workspace/OMERO-test-integration/openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19 /home/omero/workspace/OMERO-test-integration/src
10:42:12 + sed -i /omero.jvmcfg.append=/d /home/omero/workspace/OMERO-test-integration/src/etc/omero.properties
10:42:12 + echo 'omero.jvmcfg.append=--add-opens java.base/java.lang=ALL-UNNAMED --add-exports java.naming/com.sun.jndi.ldap=ALL-UNNAMED'
10:42:12 + source /home/omero/workspace/OMERO-test-integration/.venv3/bin/activate
10:42:12 ++ deactivate nondestructive
10:42:12 ++ '[' -n '' ']'
10:42:12 ++ '[' -n '' ']'
10:42:12 ++ hash -r
10:42:12 ++ '[' -n '' ']'
10:42:12 ++ unset VIRTUAL_ENV
10:42:12 ++ unset VIRTUAL_ENV_PROMPT
10:42:12 ++ '[' '!' nondestructive = nondestructive ']'
10:42:12 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-test-integration/.venv3
10:42:12 ++ export VIRTUAL_ENV
10:42:12 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
10:42:12 ++ PATH=/home/omero/workspace/OMERO-test-integration/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
10:42:12 ++ export PATH
10:42:12 ++ '[' -n '' ']'
10:42:12 ++ '[' -z '' ']'
10:42:12 ++ _OLD_VIRTUAL_PS1=
10:42:12 ++ PS1='(.venv3) '
10:42:12 ++ export PS1
10:42:12 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
10:42:12 ++ export VIRTUAL_ENV_PROMPT
10:42:12 ++ hash -r
10:42:12 + for x in *.tar.gz
10:42:12 + pip install -U omero_dropbox-5.7.1.dev0.tar.gz
10:42:12 Processing ./omero_dropbox-5.7.1.dev0.tar.gz
10:42:12 Installing build dependencies: started
10:42:13 Installing build dependencies: finished with status 'done'
10:42:13 Getting requirements to build wheel: started
10:42:13 Getting requirements to build wheel: finished with status 'done'
10:42:13 Preparing metadata (pyproject.toml): started
10:42:14 Preparing metadata (pyproject.toml): finished with status 'done'
10:42:14 Requirement already satisfied: omero-py in ./.venv3/lib64/python3.11/site-packages (from omero-dropbox==5.7.1.dev0) (5.21.3)
10:42:14 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.4.4)
10:42:14 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.0.0)
10:42:14 Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.4.1)
10:42:14 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (12.1.0)
10:42:14 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (6.0.3)
10:42:14 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5)
10:42:14 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.32.5)
10:42:14 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.2.0)
10:42:14 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.4.4)
10:42:14 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.11)
10:42:14 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2.6.3)
10:42:14 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2026.1.4)
10:42:14 Building wheels for collected packages: omero-dropbox
10:42:14 Building wheel for omero-dropbox (pyproject.toml): started
10:42:14 Building wheel for omero-dropbox (pyproject.toml): finished with status 'done'
10:42:14 Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49138 sha256=be3f8e9df13faa036d18d4514111b148553e3c252958dd3f5a8458a2729837ed
10:42:14 Stored in directory: /home/omero/.cache/pip/wheels/fc/7e/62/5e5d34b5de7cc5d8ff95a6620b111f491c603301cfe622e998
10:42:14 Successfully built omero-dropbox
10:42:14 Installing collected packages: omero-dropbox
10:42:14 Successfully installed omero-dropbox-5.7.1.dev0
10:42:14 + for x in *.tar.gz
10:42:14 + pip install -U omero_marshal-0.9.2.dev0.tar.gz
10:42:14 Processing ./omero_marshal-0.9.2.dev0.tar.gz
10:42:14 Installing build dependencies: started
10:42:15 Installing build dependencies: finished with status 'done'
10:42:15 Getting requirements to build wheel: started
10:42:16 Getting requirements to build wheel: finished with status 'done'
10:42:16 Preparing metadata (pyproject.toml): started
10:42:16 Preparing metadata (pyproject.toml): finished with status 'done'
10:42:16 Building wheels for collected packages: omero_marshal
10:42:16 Building wheel for omero_marshal (pyproject.toml): started
10:42:16 Building wheel for omero_marshal (pyproject.toml): finished with status 'done'
10:42:16 Created wheel for omero_marshal: filename=omero_marshal-0.9.2.dev0-py3-none-any.whl size=88132 sha256=c7607b47c6d2c0052dfcb95cbe39e5a2d590a99ff6fd7d73856468df7e721ebe
10:42:16 Stored in directory: /home/omero/.cache/pip/wheels/19/bc/99/c23dd653c71b3f05e4c008a12495c8f3b095cce849431c54e1
10:42:16 Successfully built omero_marshal
10:42:16 Installing collected packages: omero_marshal
10:42:16 Attempting uninstall: omero_marshal
10:42:16 Found existing installation: omero_marshal 0.9.1
10:42:16 Uninstalling omero_marshal-0.9.1:
10:42:16 Successfully uninstalled omero_marshal-0.9.1
10:42:16 Successfully installed omero_marshal-0.9.2.dev0
10:42:16 + for x in *.tar.gz
10:42:16 + pip install -U omero_py-5.22.0.dev0.tar.gz
10:42:17 Processing ./omero_py-5.22.0.dev0.tar.gz
10:42:17 Installing build dependencies: started
10:42:18 Installing build dependencies: finished with status 'done'
10:42:18 Getting requirements to build wheel: started
10:42:19 Getting requirements to build wheel: finished with status 'done'
10:42:19 Preparing metadata (pyproject.toml): started
10:42:19 Preparing metadata (pyproject.toml): finished with status 'done'
10:42:19 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (1.4.4)
10:42:19 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (1.0.0)
10:42:19 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (2.4.1)
10:42:19 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (12.1.0)
10:42:19 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (6.0.3)
10:42:19 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (3.6.5)
10:42:19 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (2.32.5)
10:42:19 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (3.2.0)
10:42:19 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.0.dev0) (3.4.4)
10:42:19 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.0.dev0) (3.11)
10:42:19 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.0.dev0) (2.6.3)
10:42:19 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.0.dev0) (2026.1.4)
10:42:19 Building wheels for collected packages: omero-py
10:42:19 Building wheel for omero-py (pyproject.toml): started
10:42:20 Building wheel for omero-py (pyproject.toml): finished with status 'done'
10:42:20 Created wheel for omero-py: filename=omero_py-5.22.0.dev0-py3-none-any.whl size=2785928 sha256=5891557a9cc790ac129d9e7e64ac624f76209469808fe9dfa3e29be312682f2d
10:42:20 Stored in directory: /home/omero/.cache/pip/wheels/9e/05/9b/8e8bd103e965dc55f7156458690d079677bf95848965ee2e52
10:42:20 Successfully built omero-py
10:42:20 Installing collected packages: omero-py
10:42:20 Attempting uninstall: omero-py
10:42:20 Found existing installation: omero-py 5.21.3
10:42:20 Uninstalling omero-py-5.21.3:
10:42:20 Successfully uninstalled omero-py-5.21.3
10:42:23 Successfully installed omero-py-5.22.0.dev0
10:42:23 + for x in *.tar.gz
10:42:23 + pip install -U omero_scripts-5.9.2.dev0.tar.gz
10:42:24 Processing ./omero_scripts-5.9.2.dev0.tar.gz
10:42:24 Installing build dependencies: started
10:42:24 Installing build dependencies: finished with status 'done'
10:42:24 Getting requirements to build wheel: started
10:42:25 Getting requirements to build wheel: finished with status 'done'
10:42:25 Preparing metadata (pyproject.toml): started
10:42:25 Preparing metadata (pyproject.toml): finished with status 'done'
10:42:25 Building wheels for collected packages: omero-scripts
10:42:25 Building wheel for omero-scripts (pyproject.toml): started
10:42:25 Building wheel for omero-scripts (pyproject.toml): finished with status 'done'
10:42:25 Created wheel for omero-scripts: filename=omero_scripts-5.9.2.dev0-py3-none-any.whl size=136991 sha256=2f9a54ec1e5e350b9efab4c647e2458e9015b11824b1f771a3f1bb6382eb08bb
10:42:25 Stored in directory: /home/omero/.cache/pip/wheels/4c/39/ec/1d35a9b903bbfa62e645ce3b85c00080824fa78bacce0f38d4
10:42:25 Successfully built omero-scripts
10:42:25 Installing collected packages: omero-scripts
10:42:25 Successfully installed omero-scripts-5.9.2.dev0
10:42:25 + for x in *.tar.gz
10:42:25 + pip install -U omero_web-5.30.2.dev0.tar.gz
10:42:26 Processing ./omero_web-5.30.2.dev0.tar.gz
10:42:26 Installing build dependencies: started
10:42:27 Installing build dependencies: finished with status 'done'
10:42:27 Getting requirements to build wheel: started
10:42:27 Getting requirements to build wheel: finished with status 'done'
10:42:27 Preparing metadata (pyproject.toml): started
10:42:27 Preparing metadata (pyproject.toml): finished with status 'done'
10:42:27 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (5.22.0.dev0)
10:42:27 Requirement already satisfied: concurrent-log-handler>=0.9.20 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (0.9.28)
10:42:27 Requirement already satisfied: Django<5.3,>=5.2.9 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (5.2.10)
10:42:27 Requirement already satisfied: django-pipeline in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (4.1.0)
10:42:27 Requirement already satisfied: django-cors-headers==3.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (3.7.0)
10:42:27 Requirement already satisfied: whitenoise>=5.3.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (6.11.0)
10:42:27 Requirement already satisfied: gunicorn>=19.3 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (23.0.0)
10:42:27 Requirement already satisfied: omero-marshal>=0.9.1 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (0.9.2.dev0)
10:42:27 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (12.1.0)
10:42:27 Requirement already satisfied: pytz in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (2025.2)
10:42:27 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (3.2.0)
10:42:27 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (25.0)
10:42:27 Requirement already satisfied: importlib-resources in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (6.5.2)
10:42:27 Requirement already satisfied: asgiref>=3.8.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web==5.30.2.dev0) (3.11.0)
10:42:27 Requirement already satisfied: sqlparse>=0.3.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web==5.30.2.dev0) (0.5.5)
10:42:27 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (1.4.4)
10:42:27 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (1.0.0)
10:42:27 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (2.4.1)
10:42:27 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (6.0.3)
10:42:27 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (3.6.5)
10:42:27 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (2.32.5)
10:42:27 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web==5.30.2.dev0) (80.9.0)
10:42:27 Requirement already satisfied: wheel in ./.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web==5.30.2.dev0) (0.45.1)
10:42:27 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.30.2.dev0) (3.4.4)
10:42:27 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.30.2.dev0) (3.11)
10:42:27 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.30.2.dev0) (2.6.3)
10:42:27 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.30.2.dev0) (2026.1.4)
10:42:27 Building wheels for collected packages: omero-web
10:42:27 Building wheel for omero-web (pyproject.toml): started
10:42:28 Building wheel for omero-web (pyproject.toml): finished with status 'done'
10:42:28 Created wheel for omero-web: filename=omero_web-5.30.2.dev0-py3-none-any.whl size=2819260 sha256=28c3ce963947b0d0911feb0e0fb4d778a190866d17e8ec315ba091f3ca56fcac
10:42:28 Stored in directory: /home/omero/.cache/pip/wheels/0d/49/80/4b4b5592fd01eeb0bef6a246d6a6aeb54cccbb12fbd6a88c62
10:42:28 Successfully built omero-web
10:42:28 Installing collected packages: omero-web
10:42:28 Attempting uninstall: omero-web
10:42:28 Found existing installation: omero-web 5.30.1
10:42:28 Uninstalling omero-web-5.30.1:
10:42:28 Successfully uninstalled omero-web-5.30.1
10:42:29 Successfully installed omero-web-5.30.2.dev0
10:42:29 + pip install omero-certificates
10:42:29 Collecting omero-certificates
10:42:29 Using cached omero_certificates-0.4.0-py3-none-any.whl.metadata (3.3 kB)
10:42:29 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-certificates) (5.22.0.dev0)
10:42:29 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (1.4.4)
10:42:29 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (1.0.0)
10:42:29 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (2.4.1)
10:42:29 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (12.1.0)
10:42:29 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (6.0.3)
10:42:29 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (3.6.5)
10:42:29 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (2.32.5)
10:42:29 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (3.2.0)
10:42:29 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.4.4)
10:42:29 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.11)
10:42:29 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2.6.3)
10:42:29 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2026.1.4)
10:42:29 Using cached omero_certificates-0.4.0-py3-none-any.whl (11 kB)
10:42:30 Installing collected packages: omero-certificates
10:42:30 Successfully installed omero-certificates-0.4.0
10:42:30 + for x in omero-cli-duplicate
10:42:30 + pip install git+https://github.com/snoopycrimecop/omero-cli-duplicate.git@merge_ci#egg=omero-cli-duplicate
10:42:30 Collecting omero-cli-duplicate
10:42:30 Cloning https://github.com/snoopycrimecop/omero-cli-duplicate.git (to revision merge_ci) to /tmp/pip-install-e2_bylxo/omero-cli-duplicate_70fe4126683b48f2879827b58cc7ab1b
10:42:30 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-duplicate.git /tmp/pip-install-e2_bylxo/omero-cli-duplicate_70fe4126683b48f2879827b58cc7ab1b
10:42:31 Running command git checkout -b merge_ci --track origin/merge_ci
10:42:31 Switched to a new branch 'merge_ci'
10:42:31 branch 'merge_ci' set up to track 'origin/merge_ci'.
10:42:31 Resolved https://github.com/snoopycrimecop/omero-cli-duplicate.git to commit 261c4360dee8034a4c34d384dde954b891b4b299
10:42:31 Installing build dependencies: started
10:42:32 Installing build dependencies: finished with status 'done'
10:42:32 Getting requirements to build wheel: started
10:42:32 Getting requirements to build wheel: finished with status 'done'
10:42:32 Preparing metadata (pyproject.toml): started
10:42:32 Preparing metadata (pyproject.toml): finished with status 'done'
10:42:32 Requirement already satisfied: omero-py>=5.8 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-duplicate) (5.22.0.dev0)
10:42:32 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.4.4)
10:42:32 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.0.0)
10:42:32 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.4.1)
10:42:32 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (12.1.0)
10:42:32 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (6.0.3)
10:42:32 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.6.5)
10:42:32 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.32.5)
10:42:32 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.2.0)
10:42:32 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.4.4)
10:42:32 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.11)
10:42:32 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2.6.3)
10:42:32 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2026.1.4)
10:42:32 Building wheels for collected packages: omero-cli-duplicate
10:42:32 Building wheel for omero-cli-duplicate (pyproject.toml): started
10:42:32 Building wheel for omero-cli-duplicate (pyproject.toml): finished with status 'done'
10:42:32 Created wheel for omero-cli-duplicate: filename=omero_cli_duplicate-0.4.1.dev0-py3-none-any.whl size=11541 sha256=ba70429b59b30e674afdeeb8c0be6ab9d6f1c4d9c86687e1b60bbc21bae35d90
10:42:32 Stored in directory: /tmp/pip-ephem-wheel-cache-lwzqaipg/wheels/28/e4/77/20667ec1be487a1994d60f59ce11eeba2ac0c8c34aea209b46
10:42:32 Successfully built omero-cli-duplicate
10:42:33 Installing collected packages: omero-cli-duplicate
10:42:33 Successfully installed omero-cli-duplicate-0.4.1.dev0
10:42:33 + source /home/omero/workspace/OMERO-test-integration/src/docs/hudson/functions.sh
10:42:33 + /home/omero/workspace/OMERO-test-integration/src/build.py build-default test-compile
10:42:33 Buildfile: /home/omero/workspace/OMERO-test-integration/src/build.xml
10:42:33
10:42:33 check-ivy:
10:42:33 Creating /home/omero/workspace/OMERO-test-integration/src/etc/local.properties
10:42:33 Created dir: /home/omero/workspace/OMERO-test-integration/src/target
10:42:33 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:42:33 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
10:42:34
10:42:34 build-scons:
10:42:34 Expanding: /home/omero/workspace/OMERO-test-integration/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-test-integration/src/target/scons
10:42:34
10:42:34 build:
10:42:34 No sub-builds to iterate on
10:42:34 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb...
10:42:34 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb...
10:42:34 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroFS...
10:42:34 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava...
10:42:34
10:42:34 tools-init:
10:42:34 no-op
10:42:34
10:42:34 retrieve:
10:42:34 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:42:34 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
10:43:09
10:43:09 prepare:
10:43:09 Preparing: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs
10:43:09 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/.done
10:43:09 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/src
10:43:09 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources
10:43:09 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes
10:43:09 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/test-classes
10:43:09 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/reports
10:43:09 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources
10:43:09 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes
10:43:09 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources
10:43:09 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes
10:43:09 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources
10:43:09 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes
10:43:09 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources
10:43:09 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes
10:43:09
10:43:09 pre-compile:
10:43:09 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes
10:43:09 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes
10:43:09 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes
10:43:09 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes
10:43:09 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes
10:43:09
10:43:09 compile:
10:43:09 no-op
10:43:09
10:43:09 package:
10:43:09 Building jar: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/omero_client.jar
10:43:10
10:43:10 install:
10:43:10 :: delivering :: omero#omero_client;working@57f60e06d356 :: 5.6.3-581-fe5e08de73-ice36-b19-ice36 :: integration :: Thu Jan 15 10:42:34 UTC 2026
10:43:10 delivering ivy file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/ivy.xml
10:43:10 :: publishing :: omero#omero_client
10:43:10 published omero_client to /home/omero/workspace/OMERO-test-integration/src/target/repository/omero/omero_client/5.6.3-581-fe5e08de73-ice36-b19-ice36/omero_client-5.6.3-581-fe5e08de73-ice36-b19-ice36.jar
10:43:10 published ivy to /home/omero/workspace/OMERO-test-integration/src/target/repository/omero/omero_client/5.6.3-581-fe5e08de73-ice36-b19-ice36/omero_client-5.6.3-581-fe5e08de73-ice36-b19-ice36.xml
10:43:10 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy...
10:43:10 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy...
10:43:10
10:43:10 retrieve:
10:43:10 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:43:10 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
10:43:10 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools...
10:43:10
10:43:10 dist:
10:43:10 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/target/service-classes/META-INF
10:43:10 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/target/lib/server
10:43:10 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/target/downloads/scripts
10:43:10 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/target/downloads/scripts/omero_scripts-5.9.2.dev0.tar.gz into /home/omero/workspace/OMERO-test-integration/src/components/tools/target/downloads/scripts
10:43:10 Copying 29 files to /home/omero/workspace/OMERO-test-integration/src/components/tools/target/lib/scripts
10:43:10 Copying 29 files to /home/omero/workspace/OMERO-test-integration/src/dist
10:43:10 Copied 9 empty directories to 1 empty directory under /home/omero/workspace/OMERO-test-integration/src/dist
10:43:10 Entering /home/omero/workspace/OMERO-test-integration/src/components/tests...
10:43:10 Entering /home/omero/workspace/OMERO-test-integration/src/components/tests/ui...
10:43:10
10:43:10 copy-licenses:
10:43:10 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/dist
10:43:10 Created dir: /home/omero/workspace/OMERO-test-integration/src/dist/share
10:43:10 Copying 44 files to /home/omero/workspace/OMERO-test-integration/src/dist/share
10:43:10
10:43:10 copy-history:
10:43:10 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/dist
10:43:10
10:43:10 copy-etc:
10:43:10 Copying 28 files to /home/omero/workspace/OMERO-test-integration/src/dist/etc
10:43:10 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/dist/etc/templates
10:43:10
10:43:10 copy-sql:
10:43:10 Copying 60 files to /home/omero/workspace/OMERO-test-integration/src/dist
10:43:16
10:43:16 copy-server:
10:43:16 conflict on /home/omero/workspace/OMERO-test-integration/src/dist/lib/server/janino.jar in [server]: 3.1.9 won
10:43:16
10:43:16 copy-client:
10:43:16 Created dir: /home/omero/workspace/OMERO-test-integration/src/dist/lib/client
10:43:17 conflict on /home/omero/workspace/OMERO-test-integration/src/dist/lib/client/janino.jar in [client]: 3.1.9 won
10:43:17
10:43:17 update-version:
10:43:17 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/dist/etc
10:43:17
10:43:17 create-workdirs:
10:43:17 Created dir: /home/omero/workspace/OMERO-test-integration/src/dist/etc/grid
10:43:17 Created dir: /home/omero/workspace/OMERO-test-integration/src/dist/var
10:43:17 Created dir: /home/omero/workspace/OMERO-test-integration/src/dist/var/tmp
10:43:17
10:43:17 copy-luts:
10:43:17 Created dir: /home/omero/workspace/OMERO-test-integration/src/dist/lib/scripts/luts
10:43:17 Copying 47 files to /home/omero/workspace/OMERO-test-integration/src/dist/lib/scripts/luts
10:43:17
10:43:17 test-compile:
10:43:17 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
10:43:17 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroFS...
10:43:17 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy...
10:43:17 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy...
10:43:17 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb...
10:43:17 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb...
10:43:17 Entering /home/omero/workspace/OMERO-test-integration/src/components/tests/ui...
10:43:17 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava...
10:43:17
10:43:17 testng-init:
10:43:17 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:43:17 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
10:43:20 10:43:19,945 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.16
10:43:20 10:43:19,948 |-INFO in ch.qos.logback.classic.util.ContextInitializer@44459661 - No custom configurators were discovered as a service.
10:43:20 10:43:19,948 |-INFO in ch.qos.logback.classic.util.ContextInitializer@44459661 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
10:43:20 10:43:19,951 |-INFO in ch.qos.logback.classic.util.ContextInitializer@44459661 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
10:43:20 10:43:19,951 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
10:43:20 10:43:19,951 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
10:43:20 10:43:19,952 |-INFO in ch.qos.logback.classic.util.ContextInitializer@44459661 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
10:43:20 10:43:19,952 |-INFO in ch.qos.logback.classic.util.ContextInitializer@44459661 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
10:43:20 10:43:19,954 |-INFO in ch.qos.logback.classic.util.ContextInitializer@44459661 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
10:43:20 10:43:19,954 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
10:43:20 10:43:19,954 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml]
10:43:20 10:43:19,955 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@bdeda0e - Resource [logback.xml] occurs multiple times on the classpath.
10:43:20 10:43:19,955 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@bdeda0e - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml]
10:43:20 10:43:19,955 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@bdeda0e - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
10:43:20 10:43:20,136 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
10:43:20 10:43:20,136 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
10:43:20 10:43:20,152 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
10:43:20 10:43:20,154 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@7548d0d - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
10:43:20 10:43:20,154 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@7548d0d - Please move "immediateFlush" property into the enclosing appender.
10:43:20 10:43:20,207 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@7548d0d - Setting the "immediateFlush" property of the enclosing appender to true
10:43:20 10:43:20,207 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
10:43:20 10:43:20,207 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
10:43:20 10:43:20,207 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
10:43:20 10:43:20,207 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
10:43:20 10:43:20,208 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
10:43:20 10:43:20,208 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
10:43:20 10:43:20,209 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@393489c3 - End of configuration.
10:43:20 10:43:20,210 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@51aae61a - Registering current configuration as safe fallback point
10:43:20 10:43:20,210 |-INFO in ch.qos.logback.classic.util.ContextInitializer@44459661 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 256 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
10:43:20
10:43:20 lifecycle.test-compile:
10:43:20 Copying 3 files to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/test-classes
10:43:20 Compiling 85 source files to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/test-classes
10:43:20 warning: [options] bootstrap class path not set in conjunction with -source 8
10:43:21 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/AbstractServerTest.java:61: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:43:21 import omero.grid.RawAccessRequest;
10:43:21 ^
10:43:21 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:32: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:43:21 import omero.grid.RawAccessRequest;
10:43:21 ^
10:43:22 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:53: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:43:22 import omero.grid.RawAccessRequest;
10:43:22 ^
10:43:22 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:31: warning: [deprecation] ImportJob in omero.model has been deprecated
10:43:22 import omero.model.ImportJob;
10:43:22 ^
10:43:22 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:32: warning: [deprecation] ImportJobI in omero.model has been deprecated
10:43:22 import omero.model.ImportJobI;
10:43:22 ^
10:43:22 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ModelMockFactory.java:1206: warning: [deprecation] newInstance() in Class has been deprecated
10:43:22 IObject link = (IObject) linkClass.newInstance();
10:43:22 ^
10:43:22 where T is a type-variable:
10:43:22 T extends Object declared in class Class
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/CreatePojosFixture2.java:269: warning: [deprecation] newInstance() in Class has been deprecated
10:43:23 T copy = (T) obj.getClass().newInstance();
10:43:23 ^
10:43:23 where T is a type-variable:
10:43:23 T extends Object declared in class Class
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:43:23 RawAccessRequest raw = new RawAccessRequest();
10:43:23 ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:43:23 RawAccessRequest raw = new RawAccessRequest();
10:43:23 ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:419: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
10:43:23 raw.repoUuid = legacy.root().getHash().getValue();
10:43:23 ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:420: warning: [deprecation] command in RawAccessRequest has been deprecated
10:43:23 raw.command = "rm";
10:43:23 ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:421: warning: [deprecation] args in RawAccessRequest has been deprecated
10:43:23 raw.args = Arrays.asList(path);
10:43:23 ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DiskUsageTest.java:156: warning: [deprecation] newInstance() in Class has been deprecated
10:43:23 final IObject link = linkClass.newInstance();
10:43:23 ^
10:43:23 where T is a type-variable:
10:43:23 T extends Object declared in class Class
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DuplicationTest.java:1332: warning: [deprecation] newInstance() in Class has been deprecated
10:43:23 originalLink.setChild(annotationClass.newInstance());
10:43:23 ^
10:43:23 where T is a type-variable:
10:43:23 T extends Object declared in class Class
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ImporterTest.java:1088: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
10:43:23 RoiResult r = svc.findByImage(id, new RoiOptions());
10:43:23 ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:43:23 final RawAccessRequest request = new RawAccessRequest();
10:43:23 ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:43:23 final RawAccessRequest request = new RawAccessRequest();
10:43:23 ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:901: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
10:43:23 request.repoUuid = repo.root().getHash().getValue();
10:43:23 ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:902: warning: [deprecation] command in RawAccessRequest has been deprecated
10:43:23 request.command = "exists";
10:43:23 ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:903: warning: [deprecation] args in RawAccessRequest has been deprecated
10:43:23 request.args = Collections.singletonList(dirPath);
10:43:23 ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:43:23 final RawAccessRequest request = new RawAccessRequest();
10:43:23 ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:43:23 final RawAccessRequest request = new RawAccessRequest();
10:43:23 ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:940: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
10:43:23 request.repoUuid = repo.root().getHash().getValue();
10:43:23 ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:941: warning: [deprecation] command in RawAccessRequest has been deprecated
10:43:23 request.command = "exists";
10:43:23 ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:942: warning: [deprecation] args in RawAccessRequest has been deprecated
10:43:23 request.args = Collections.singletonList(dirName);
10:43:23 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJob in omero.model has been deprecated
10:43:24 final ImportJob importJob = new ImportJobI();
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJobI in omero.model has been deprecated
10:43:24 final ImportJob importJob = new ImportJobI();
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:266: warning: [deprecation] setImageName(RString) in ImportJob has been deprecated
10:43:24 importJob.setImageName(omero.rtypes.rstring(name));
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:268: warning: [deprecation] setImageDescription(RString) in ImportJob has been deprecated
10:43:24 importJob.setImageDescription(omero.rtypes.rstring(desc));
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
10:43:24 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
10:43:24 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:274: warning: [deprecation] getImageName() in ImportJob has been deprecated
10:43:24 final String savedName = sent.getImageName().getValue().toString();
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:275: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
10:43:24 final String savedDesc = sent.getImageDescription().getValue().toString();
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
10:43:24 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
10:43:24 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:278: warning: [deprecation] getImageName() in ImportJob has been deprecated
10:43:24 final String retrievedName = retrievedImportJob.getImageName().getValue().toString();
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:279: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
10:43:24 final String retrievedDesc = retrievedImportJob.getImageDescription().getValue().toString();
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:141: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24 RoiResult r = svc.findByImage(image.getId().getValue(),
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:190: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:220: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24 l = svc.getRoiMeasurements(image.getId().getValue(), options);
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:241: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24 l = svc.getRoiMeasurements(image.getId().getValue(), options);
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:313: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:320: warning: [deprecation] getMeasuredRoisMap(long,List<Long>,RoiOptions) in IRoiPrx has been deprecated
10:43:24 Map<Long, RoiResult> values = svc.getMeasuredRoisMap(image.getId()
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:386: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:390: warning: [deprecation] getTable(long) in IRoiPrx has been deprecated
10:43:24 table = svc.getTable(f.getId().getValue());
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:412: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24 RoiResult r = svc.findByImage(image.getId().getValue(),
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:426: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24 r = svc.findByRoi(r1.getId().getValue(), new RoiOptions());
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:437: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24 r = svc.findByRoi(r2.getId().getValue(), new RoiOptions());
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:448: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
10:43:24 r = svc.findByPlane(image.getId().getValue(), 1, 0, new RoiOptions());
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:459: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
10:43:24 r = svc.findByPlane(image.getId().getValue(), 1, 1, new RoiOptions());
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Long(long) in Long has been deprecated and marked for removal
10:43:24 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:755: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
10:43:24 svc.getShapeStatsRestricted(
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:764: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
10:43:24 final ShapeStats [] stats = svc.getShapeStatsRestricted(ids, 0, 0, new int[] {0});
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java:1030: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:43:24 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:478: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
10:43:24 request.typesToIgnore = Collections.singletonList("TagAnnotation");
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:495: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
10:43:24 request.typesToIgnore = Collections.singletonList("IAnnotationLink");
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:501: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
10:43:24 request.typesToIgnore = Collections.singletonList("Annotation");
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:547: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
10:43:24 request.typesToIgnore = Collections.singletonList("Annotation");
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/HierarchyDeleteTest.java:537: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:43:24 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:37: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:43:24 p2.setRelatedTo(p1);
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:39: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:43:24 Assert.assertEquals(p1.getId(), p2.getRelatedTo().getId());
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:66: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:43:24 pixels1.setRelatedTo(pixels2);
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:68: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:43:24 Pixels pixels = pixels1.getRelatedTo();
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:88: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:43:24 Assert.assertNull(pixels1.getRelatedTo());
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:106: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:43:24 pixels1.setRelatedTo(pixels2);
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:108: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:43:24 Pixels pixels = pixels1.getRelatedTo();
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:128: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:43:24 Assert.assertNull(pixels1.getRelatedTo());
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:113: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:147: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24 l = svc.getRoiMeasurements(image.getId().getValue(), options);
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:186: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:43:24 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:221: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24 l = svc.getRoiMeasurements(image.getId().getValue(), options);
10:43:24 ^
10:43:25 Note: Some input files use unchecked or unsafe operations.
10:43:25 Note: Recompile with -Xlint:unchecked for details.
10:43:25 88 warnings
10:43:25 Deleting: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/_omero_build_1760283415.tmp
10:43:25 Building jar: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/OmeroJava-test.jar
10:43:25 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
10:43:25 :: delivering :: omero#OmeroJava-test;working@57f60e06d356 :: 5.6.3-581-fe5e08de73-ice36-b19-ice36 :: integration :: Thu Jan 15 10:43:17 UTC 2026
10:43:25 delivering ivy file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/OmeroJava-test.xml
10:43:25 :: publishing :: omero#OmeroJava-test
10:43:25 published OmeroJava-test to /home/omero/workspace/OMERO-test-integration/src/target/test-repository/OmeroJava-test-5.6.3-581-fe5e08de73-ice36-b19-ice36.jar
10:43:25 published ivy to /home/omero/workspace/OMERO-test-integration/src/target/test-repository/OmeroJava-test-5.6.3-581-fe5e08de73-ice36-b19-ice36.xml
10:43:25
10:43:25 BUILD SUCCESSFUL
10:43:25 Total time: 52 seconds
10:43:25 + OMERO_DIST=/home/omero/workspace/OMERO-test-integration/src/dist
10:43:25 + export OMERODIR=/home/omero/workspace/OMERO-test-integration/src/dist
10:43:25 + OMERODIR=/home/omero/workspace/OMERO-test-integration/src/dist
10:43:25 + omero config set omero.db.name OMERO-test-integration
10:43:26 + omero config set omero.db.host pg
10:43:27 + omero config set omero.db.user postgres
10:43:27 + omero config set omero.db.poolsize 50
10:43:28 + omero config set omero.jvmcfg.max_system_memory.blitz 64000
10:43:29 + omero config set omero.data.dir /home/omero/workspace/OMERO-test-integration/data
10:43:30 + omero config set omero.ports.prefix 1
10:43:31 + omero config set omero.web.server_list '[["testintegration",14064,"testintegration"]]'
10:43:32 + omero certificates
10:43:32 OpenSSL 3.5.1 1 Jul 2025 (Library: OpenSSL 3.5.1 1 Jul 2025)
10:43:33 certificates created: /home/omero/workspace/OMERO-test-integration/data/certs/server.key /home/omero/workspace/OMERO-test-integration/data/certs/server.pem /home/omero/workspace/OMERO-test-integration/data/certs/server.p12
10:43:33 + createdb -h pg -U postgres OMERO-test-integration
10:43:33 + omero db script -f dbsetup.sql '' '' omero
10:43:33 WARNING: Positional arguments are deprecated
10:43:34 Using OMERO5.4 for version
10:43:34 Using 0 for patch
10:43:34 Using password from commandline
10:43:34 + psql -h pg -U postgres -d OMERO-test-integration -f dbsetup.sql
10:43:34 BEGIN
10:43:34 CREATE FUNCTION
10:43:34 CREATE FUNCTION
10:43:34 assert_db_server_prerequisites
10:43:34 --------------------------------
10:43:34
10:43:34 (1 row)
10:43:34
10:43:34 DROP FUNCTION
10:43:34 DROP FUNCTION
10:43:34 CREATE DOMAIN
10:43:34 CREATE DOMAIN
10:43:34 CREATE DOMAIN
10:43:34 CREATE DOMAIN
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10:43:34 CREATE TYPE
10:43:34 CREATE TYPE
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10:43:35 psql:dbsetup.sql:2842: NOTICE: identifier "fkcontraststretchingcontext_codomainmapcontext_id_codomainmapcontext" will be truncated to "fkcontraststretchingcontext_codomainmapcontext_id_codomainmapco"
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10:43:35 psql:dbsetup.sql:5697: NOTICE: identifier "fkreverseintensitycontext_codomainmapcontext_id_codomainmapcontext" will be truncated to "fkreverseintensitycontext_codomainmapcontext_id_codomainmapcont"
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10:43:36 CREATE FUNCTION
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10:43:36 CREATE INDEX
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10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE FUNCTION
10:43:36 SET CONSTRAINTS
10:43:36 CREATE FUNCTION
10:43:36 CREATE SEQUENCE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 CREATE INDEX
10:43:36 CREATE FUNCTION
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE TABLE
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 INSERT 0 1
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 INSERT 0 1
10:43:36 INSERT 0 1
10:43:36 INSERT 0 1
10:43:36 INSERT 0 1
10:43:36 INSERT 0 1
10:43:36 INSERT 0 1
10:43:36 INSERT 0 1
10:43:36 INSERT 0 1
10:43:36 INSERT 0 1
10:43:36 INSERT 0 1
10:43:36 INSERT 0 1
10:43:36 INSERT 0 1
10:43:36 INSERT 0 1
10:43:36 UPDATE 1
10:43:36 UPDATE 1
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 INSERT 0 1
10:43:36 INSERT 0 1
10:43:36 INSERT 0 1
10:43:36 INSERT 0 1
10:43:36 INSERT 0 1
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10:43:36 INSERT 0 1
10:43:36 INSERT 0 1
10:43:36 INSERT 0 1
10:43:36 INSERT 0 1
10:43:36 UPDATE 1
10:43:36 UPDATE 1
10:43:36 UPDATE 1
10:43:36 UPDATE 1
10:43:36 UPDATE 1
10:43:36 UPDATE 1
10:43:36 UPDATE 1
10:43:36 UPDATE 1
10:43:36 UPDATE 1
10:43:36 UPDATE 1
10:43:36 UPDATE 1
10:43:36 ALTER TABLE
10:43:36 CREATE FUNCTION
10:43:36 CREATE TABLE
10:43:36 INSERT 0 1
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 CREATE INDEX
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 ALTER TABLE
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE TABLE
10:43:36 INSERT 0 1
10:43:36 INSERT 0 1
10:43:36 CREATE TABLE
10:43:36 INSERT 0 1
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE TABLE
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 DROP TABLE
10:43:36 DROP TABLE
10:43:36 DROP TABLE
10:43:36 DROP TABLE
10:43:36 DROP TABLE
10:43:36 CREATE VIEW
10:43:36 CREATE VIEW
10:43:36 CREATE VIEW
10:43:36 CREATE VIEW
10:43:36 CREATE VIEW
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE TABLE
10:43:36 CREATE INDEX
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE INDEX
10:43:36 UPDATE 1
10:43:36 COMMIT
10:43:36 + rm dbsetup.sql
10:43:36 + export OMERO_PROFILE=/home/omero/workspace/OMERO-test-integration/config
10:43:36 + OMERO_PROFILE=/home/omero/workspace/OMERO-test-integration/config
10:43:36 + mkdir -p /home/omero/workspace/OMERO-test-integration/config/blitz
10:43:36 + cp /home/omero/workspace/OMERO-test-integration/src/dist/etc/blitz/mail-senders.example /home/omero/workspace/OMERO-test-integration/src/dist/etc/blitz/mail-server.example /home/omero/workspace/OMERO-test-integration/config/blitz
10:43:36 + for f in $OMERO_PROFILE/blitz/*
10:43:36 ++ basename /home/omero/workspace/OMERO-test-integration/config/blitz/mail-senders.example .example
10:43:36 + mv /home/omero/workspace/OMERO-test-integration/config/blitz/mail-senders.example /home/omero/workspace/OMERO-test-integration/config/blitz/mail-senders.xml
10:43:36 + for f in $OMERO_PROFILE/blitz/*
10:43:36 ++ basename /home/omero/workspace/OMERO-test-integration/config/blitz/mail-server.example .example
10:43:36 + mv /home/omero/workspace/OMERO-test-integration/config/blitz/mail-server.example /home/omero/workspace/OMERO-test-integration/config/blitz/mail-server.xml
10:43:36 + omero config set omero.mail.config true
10:43:37 + omero config set omero.mail.fake true
10:43:38 + omero config set omero.mail.port 2525
10:43:39 + BUILD_ID=DONT_KILL_ME
10:43:39 + omero admin start
10:43:43 No descriptor given. Using etc/grid/default.xml
10:43:45 Creating /home/omero/workspace/OMERO-test-integration/src/dist/var/master
10:43:45 Initializing /home/omero/workspace/OMERO-test-integration/src/dist/var/log
10:43:45 Creating /home/omero/workspace/OMERO-test-integration/src/dist/var/registry
10:43:45 Waiting on startup. Use CTRL-C to exit
10:43:45 .......................Build was aborted
10:47:29 Aborted by devspace
10:47:29 Recording test results
10:47:29 Terminated
10:47:30 ERROR: Step ‘Publish JUnit test result report’ failed: No test report files were found. Configuration error?
10:47:30 Build Aborted. Not looking for any TestNG results.
10:47:30 Finished: ABORTED
