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10:42:12 + rm -f openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19.zip
10:42:12 + mv /home/omero/workspace/OMERO-test-integration/openmicroscopy-5.6.3-581-fe5e08de73-ice36-b19 /home/omero/workspace/OMERO-test-integration/src
10:42:12 + sed -i /omero.jvmcfg.append=/d /home/omero/workspace/OMERO-test-integration/src/etc/omero.properties
10:42:12 + echo 'omero.jvmcfg.append=--add-opens java.base/java.lang=ALL-UNNAMED --add-exports java.naming/com.sun.jndi.ldap=ALL-UNNAMED'
10:42:12 + source /home/omero/workspace/OMERO-test-integration/.venv3/bin/activate
10:42:12 ++ deactivate nondestructive
10:42:12 ++ '[' -n '' ']'
10:42:12 ++ '[' -n '' ']'
10:42:12 ++ hash -r
10:42:12 ++ '[' -n '' ']'
10:42:12 ++ unset VIRTUAL_ENV
10:42:12 ++ unset VIRTUAL_ENV_PROMPT
10:42:12 ++ '[' '!' nondestructive = nondestructive ']'
10:42:12 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-test-integration/.venv3
10:42:12 ++ export VIRTUAL_ENV
10:42:12 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
10:42:12 ++ PATH=/home/omero/workspace/OMERO-test-integration/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
10:42:12 ++ export PATH
10:42:12 ++ '[' -n '' ']'
10:42:12 ++ '[' -z '' ']'
10:42:12 ++ _OLD_VIRTUAL_PS1=
10:42:12 ++ PS1='(.venv3) '
10:42:12 ++ export PS1
10:42:12 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
10:42:12 ++ export VIRTUAL_ENV_PROMPT
10:42:12 ++ hash -r
10:42:12 + for x in *.tar.gz
10:42:12 + pip install -U omero_dropbox-5.7.1.dev0.tar.gz
10:42:12 Processing ./omero_dropbox-5.7.1.dev0.tar.gz
10:42:12   Installing build dependencies: started
10:42:13   Installing build dependencies: finished with status 'done'
10:42:13   Getting requirements to build wheel: started
10:42:13   Getting requirements to build wheel: finished with status 'done'
10:42:13   Preparing metadata (pyproject.toml): started
10:42:14   Preparing metadata (pyproject.toml): finished with status 'done'
10:42:14 Requirement already satisfied: omero-py in ./.venv3/lib64/python3.11/site-packages (from omero-dropbox==5.7.1.dev0) (5.21.3)
10:42:14 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.4.4)
10:42:14 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.0.0)
10:42:14 Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.4.1)
10:42:14 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (12.1.0)
10:42:14 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (6.0.3)
10:42:14 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5)
10:42:14 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.32.5)
10:42:14 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.2.0)
10:42:14 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.4.4)
10:42:14 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.11)
10:42:14 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2.6.3)
10:42:14 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2026.1.4)
10:42:14 Building wheels for collected packages: omero-dropbox
10:42:14   Building wheel for omero-dropbox (pyproject.toml): started
10:42:14   Building wheel for omero-dropbox (pyproject.toml): finished with status 'done'
10:42:14   Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49138 sha256=be3f8e9df13faa036d18d4514111b148553e3c252958dd3f5a8458a2729837ed
10:42:14   Stored in directory: /home/omero/.cache/pip/wheels/fc/7e/62/5e5d34b5de7cc5d8ff95a6620b111f491c603301cfe622e998
10:42:14 Successfully built omero-dropbox
10:42:14 Installing collected packages: omero-dropbox
10:42:14 Successfully installed omero-dropbox-5.7.1.dev0
10:42:14 + for x in *.tar.gz
10:42:14 + pip install -U omero_marshal-0.9.2.dev0.tar.gz
10:42:14 Processing ./omero_marshal-0.9.2.dev0.tar.gz
10:42:14   Installing build dependencies: started
10:42:15   Installing build dependencies: finished with status 'done'
10:42:15   Getting requirements to build wheel: started
10:42:16   Getting requirements to build wheel: finished with status 'done'
10:42:16   Preparing metadata (pyproject.toml): started
10:42:16   Preparing metadata (pyproject.toml): finished with status 'done'
10:42:16 Building wheels for collected packages: omero_marshal
10:42:16   Building wheel for omero_marshal (pyproject.toml): started
10:42:16   Building wheel for omero_marshal (pyproject.toml): finished with status 'done'
10:42:16   Created wheel for omero_marshal: filename=omero_marshal-0.9.2.dev0-py3-none-any.whl size=88132 sha256=c7607b47c6d2c0052dfcb95cbe39e5a2d590a99ff6fd7d73856468df7e721ebe
10:42:16   Stored in directory: /home/omero/.cache/pip/wheels/19/bc/99/c23dd653c71b3f05e4c008a12495c8f3b095cce849431c54e1
10:42:16 Successfully built omero_marshal
10:42:16 Installing collected packages: omero_marshal
10:42:16   Attempting uninstall: omero_marshal
10:42:16     Found existing installation: omero_marshal 0.9.1
10:42:16     Uninstalling omero_marshal-0.9.1:
10:42:16       Successfully uninstalled omero_marshal-0.9.1
10:42:16 Successfully installed omero_marshal-0.9.2.dev0
10:42:16 + for x in *.tar.gz
10:42:16 + pip install -U omero_py-5.22.0.dev0.tar.gz
10:42:17 Processing ./omero_py-5.22.0.dev0.tar.gz
10:42:17   Installing build dependencies: started
10:42:18   Installing build dependencies: finished with status 'done'
10:42:18   Getting requirements to build wheel: started
10:42:19   Getting requirements to build wheel: finished with status 'done'
10:42:19   Preparing metadata (pyproject.toml): started
10:42:19   Preparing metadata (pyproject.toml): finished with status 'done'
10:42:19 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (1.4.4)
10:42:19 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (1.0.0)
10:42:19 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (2.4.1)
10:42:19 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (12.1.0)
10:42:19 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (6.0.3)
10:42:19 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (3.6.5)
10:42:19 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (2.32.5)
10:42:19 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (3.2.0)
10:42:19 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.0.dev0) (3.4.4)
10:42:19 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.0.dev0) (3.11)
10:42:19 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.0.dev0) (2.6.3)
10:42:19 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.0.dev0) (2026.1.4)
10:42:19 Building wheels for collected packages: omero-py
10:42:19   Building wheel for omero-py (pyproject.toml): started
10:42:20   Building wheel for omero-py (pyproject.toml): finished with status 'done'
10:42:20   Created wheel for omero-py: filename=omero_py-5.22.0.dev0-py3-none-any.whl size=2785928 sha256=5891557a9cc790ac129d9e7e64ac624f76209469808fe9dfa3e29be312682f2d
10:42:20   Stored in directory: /home/omero/.cache/pip/wheels/9e/05/9b/8e8bd103e965dc55f7156458690d079677bf95848965ee2e52
10:42:20 Successfully built omero-py
10:42:20 Installing collected packages: omero-py
10:42:20   Attempting uninstall: omero-py
10:42:20     Found existing installation: omero-py 5.21.3
10:42:20     Uninstalling omero-py-5.21.3:
10:42:20       Successfully uninstalled omero-py-5.21.3
10:42:23 Successfully installed omero-py-5.22.0.dev0
10:42:23 + for x in *.tar.gz
10:42:23 + pip install -U omero_scripts-5.9.2.dev0.tar.gz
10:42:24 Processing ./omero_scripts-5.9.2.dev0.tar.gz
10:42:24   Installing build dependencies: started
10:42:24   Installing build dependencies: finished with status 'done'
10:42:24   Getting requirements to build wheel: started
10:42:25   Getting requirements to build wheel: finished with status 'done'
10:42:25   Preparing metadata (pyproject.toml): started
10:42:25   Preparing metadata (pyproject.toml): finished with status 'done'
10:42:25 Building wheels for collected packages: omero-scripts
10:42:25   Building wheel for omero-scripts (pyproject.toml): started
10:42:25   Building wheel for omero-scripts (pyproject.toml): finished with status 'done'
10:42:25   Created wheel for omero-scripts: filename=omero_scripts-5.9.2.dev0-py3-none-any.whl size=136991 sha256=2f9a54ec1e5e350b9efab4c647e2458e9015b11824b1f771a3f1bb6382eb08bb
10:42:25   Stored in directory: /home/omero/.cache/pip/wheels/4c/39/ec/1d35a9b903bbfa62e645ce3b85c00080824fa78bacce0f38d4
10:42:25 Successfully built omero-scripts
10:42:25 Installing collected packages: omero-scripts
10:42:25 Successfully installed omero-scripts-5.9.2.dev0
10:42:25 + for x in *.tar.gz
10:42:25 + pip install -U omero_web-5.30.2.dev0.tar.gz
10:42:26 Processing ./omero_web-5.30.2.dev0.tar.gz
10:42:26   Installing build dependencies: started
10:42:27   Installing build dependencies: finished with status 'done'
10:42:27   Getting requirements to build wheel: started
10:42:27   Getting requirements to build wheel: finished with status 'done'
10:42:27   Preparing metadata (pyproject.toml): started
10:42:27   Preparing metadata (pyproject.toml): finished with status 'done'
10:42:27 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (5.22.0.dev0)
10:42:27 Requirement already satisfied: concurrent-log-handler>=0.9.20 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (0.9.28)
10:42:27 Requirement already satisfied: Django<5.3,>=5.2.9 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (5.2.10)
10:42:27 Requirement already satisfied: django-pipeline in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (4.1.0)
10:42:27 Requirement already satisfied: django-cors-headers==3.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (3.7.0)
10:42:27 Requirement already satisfied: whitenoise>=5.3.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (6.11.0)
10:42:27 Requirement already satisfied: gunicorn>=19.3 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (23.0.0)
10:42:27 Requirement already satisfied: omero-marshal>=0.9.1 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (0.9.2.dev0)
10:42:27 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (12.1.0)
10:42:27 Requirement already satisfied: pytz in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (2025.2)
10:42:27 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (3.2.0)
10:42:27 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (25.0)
10:42:27 Requirement already satisfied: importlib-resources in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (6.5.2)
10:42:27 Requirement already satisfied: asgiref>=3.8.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web==5.30.2.dev0) (3.11.0)
10:42:27 Requirement already satisfied: sqlparse>=0.3.1 in ./.venv3/lib64/python3.11/site-packages (from Django<5.3,>=5.2.9->omero-web==5.30.2.dev0) (0.5.5)
10:42:27 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (1.4.4)
10:42:27 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (1.0.0)
10:42:27 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (2.4.1)
10:42:27 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (6.0.3)
10:42:27 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (3.6.5)
10:42:27 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (2.32.5)
10:42:27 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web==5.30.2.dev0) (80.9.0)
10:42:27 Requirement already satisfied: wheel in ./.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web==5.30.2.dev0) (0.45.1)
10:42:27 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.30.2.dev0) (3.4.4)
10:42:27 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.30.2.dev0) (3.11)
10:42:27 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.30.2.dev0) (2.6.3)
10:42:27 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.30.2.dev0) (2026.1.4)
10:42:27 Building wheels for collected packages: omero-web
10:42:27   Building wheel for omero-web (pyproject.toml): started
10:42:28   Building wheel for omero-web (pyproject.toml): finished with status 'done'
10:42:28   Created wheel for omero-web: filename=omero_web-5.30.2.dev0-py3-none-any.whl size=2819260 sha256=28c3ce963947b0d0911feb0e0fb4d778a190866d17e8ec315ba091f3ca56fcac
10:42:28   Stored in directory: /home/omero/.cache/pip/wheels/0d/49/80/4b4b5592fd01eeb0bef6a246d6a6aeb54cccbb12fbd6a88c62
10:42:28 Successfully built omero-web
10:42:28 Installing collected packages: omero-web
10:42:28   Attempting uninstall: omero-web
10:42:28     Found existing installation: omero-web 5.30.1
10:42:28     Uninstalling omero-web-5.30.1:
10:42:28       Successfully uninstalled omero-web-5.30.1
10:42:29 Successfully installed omero-web-5.30.2.dev0
10:42:29 + pip install omero-certificates
10:42:29 Collecting omero-certificates
10:42:29   Using cached omero_certificates-0.4.0-py3-none-any.whl.metadata (3.3 kB)
10:42:29 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-certificates) (5.22.0.dev0)
10:42:29 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (1.4.4)
10:42:29 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (1.0.0)
10:42:29 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (2.4.1)
10:42:29 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (12.1.0)
10:42:29 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (6.0.3)
10:42:29 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (3.6.5)
10:42:29 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (2.32.5)
10:42:29 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (3.2.0)
10:42:29 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.4.4)
10:42:29 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.11)
10:42:29 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2.6.3)
10:42:29 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2026.1.4)
10:42:29 Using cached omero_certificates-0.4.0-py3-none-any.whl (11 kB)
10:42:30 Installing collected packages: omero-certificates
10:42:30 Successfully installed omero-certificates-0.4.0
10:42:30 + for x in omero-cli-duplicate
10:42:30 + pip install git+https://github.com/snoopycrimecop/omero-cli-duplicate.git@merge_ci#egg=omero-cli-duplicate
10:42:30 Collecting omero-cli-duplicate
10:42:30   Cloning https://github.com/snoopycrimecop/omero-cli-duplicate.git (to revision merge_ci) to /tmp/pip-install-e2_bylxo/omero-cli-duplicate_70fe4126683b48f2879827b58cc7ab1b
10:42:30   Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-duplicate.git /tmp/pip-install-e2_bylxo/omero-cli-duplicate_70fe4126683b48f2879827b58cc7ab1b
10:42:31   Running command git checkout -b merge_ci --track origin/merge_ci
10:42:31   Switched to a new branch 'merge_ci'
10:42:31   branch 'merge_ci' set up to track 'origin/merge_ci'.
10:42:31   Resolved https://github.com/snoopycrimecop/omero-cli-duplicate.git to commit 261c4360dee8034a4c34d384dde954b891b4b299
10:42:31   Installing build dependencies: started
10:42:32   Installing build dependencies: finished with status 'done'
10:42:32   Getting requirements to build wheel: started
10:42:32   Getting requirements to build wheel: finished with status 'done'
10:42:32   Preparing metadata (pyproject.toml): started
10:42:32   Preparing metadata (pyproject.toml): finished with status 'done'
10:42:32 Requirement already satisfied: omero-py>=5.8 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-duplicate) (5.22.0.dev0)
10:42:32 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.4.4)
10:42:32 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.0.0)
10:42:32 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.4.1)
10:42:32 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (12.1.0)
10:42:32 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (6.0.3)
10:42:32 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.6.5)
10:42:32 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.32.5)
10:42:32 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.2.0)
10:42:32 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.4.4)
10:42:32 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.11)
10:42:32 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2.6.3)
10:42:32 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2026.1.4)
10:42:32 Building wheels for collected packages: omero-cli-duplicate
10:42:32   Building wheel for omero-cli-duplicate (pyproject.toml): started
10:42:32   Building wheel for omero-cli-duplicate (pyproject.toml): finished with status 'done'
10:42:32   Created wheel for omero-cli-duplicate: filename=omero_cli_duplicate-0.4.1.dev0-py3-none-any.whl size=11541 sha256=ba70429b59b30e674afdeeb8c0be6ab9d6f1c4d9c86687e1b60bbc21bae35d90
10:42:32   Stored in directory: /tmp/pip-ephem-wheel-cache-lwzqaipg/wheels/28/e4/77/20667ec1be487a1994d60f59ce11eeba2ac0c8c34aea209b46
10:42:32 Successfully built omero-cli-duplicate
10:42:33 Installing collected packages: omero-cli-duplicate
10:42:33 Successfully installed omero-cli-duplicate-0.4.1.dev0
10:42:33 + source /home/omero/workspace/OMERO-test-integration/src/docs/hudson/functions.sh
10:42:33 + /home/omero/workspace/OMERO-test-integration/src/build.py build-default test-compile
10:42:33 Buildfile: /home/omero/workspace/OMERO-test-integration/src/build.xml
10:42:33 
10:42:33 check-ivy:
10:42:33 Creating /home/omero/workspace/OMERO-test-integration/src/etc/local.properties
10:42:33 Created dir: /home/omero/workspace/OMERO-test-integration/src/target
10:42:33 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:42:33 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
10:42:34 
10:42:34 build-scons:
10:42:34 Expanding: /home/omero/workspace/OMERO-test-integration/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-test-integration/src/target/scons
10:42:34 
10:42:34 build:
10:42:34 No sub-builds to iterate on
10:42:34 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb...
10:42:34 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb...
10:42:34 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroFS...
10:42:34 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava...
10:42:34 
10:42:34 tools-init:
10:42:34 no-op
10:42:34 
10:42:34 retrieve:
10:42:34 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:42:34 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
10:43:09 
10:43:09 prepare:
10:43:09 Preparing: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs
10:43:09 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/.done
10:43:09 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/src
10:43:09 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources
10:43:09 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes
10:43:09 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/test-classes
10:43:09 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/reports
10:43:09 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources
10:43:09 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes
10:43:09 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources
10:43:09 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes
10:43:09 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources
10:43:09 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes
10:43:09 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources
10:43:09 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes
10:43:09 
10:43:09 pre-compile:
10:43:09 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes
10:43:09 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes
10:43:09 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes
10:43:09 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes
10:43:09 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes
10:43:09 
10:43:09 compile:
10:43:09 no-op
10:43:09 
10:43:09 package:
10:43:09 Building jar: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/omero_client.jar
10:43:10 
10:43:10 install:
10:43:10 :: delivering :: omero#omero_client;working@57f60e06d356 :: 5.6.3-581-fe5e08de73-ice36-b19-ice36 :: integration :: Thu Jan 15 10:42:34 UTC 2026
10:43:10 	delivering ivy file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/ivy.xml
10:43:10 :: publishing :: omero#omero_client
10:43:10 	published omero_client to /home/omero/workspace/OMERO-test-integration/src/target/repository/omero/omero_client/5.6.3-581-fe5e08de73-ice36-b19-ice36/omero_client-5.6.3-581-fe5e08de73-ice36-b19-ice36.jar
10:43:10 	published ivy to /home/omero/workspace/OMERO-test-integration/src/target/repository/omero/omero_client/5.6.3-581-fe5e08de73-ice36-b19-ice36/omero_client-5.6.3-581-fe5e08de73-ice36-b19-ice36.xml
10:43:10 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy...
10:43:10 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy...
10:43:10 
10:43:10 retrieve:
10:43:10 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:43:10 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
10:43:10 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools...
10:43:10 
10:43:10 dist:
10:43:10 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/target/service-classes/META-INF
10:43:10 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/target/lib/server
10:43:10 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/target/downloads/scripts
10:43:10 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/target/downloads/scripts/omero_scripts-5.9.2.dev0.tar.gz into /home/omero/workspace/OMERO-test-integration/src/components/tools/target/downloads/scripts
10:43:10 Copying 29 files to /home/omero/workspace/OMERO-test-integration/src/components/tools/target/lib/scripts
10:43:10 Copying 29 files to /home/omero/workspace/OMERO-test-integration/src/dist
10:43:10 Copied 9 empty directories to 1 empty directory under /home/omero/workspace/OMERO-test-integration/src/dist
10:43:10 Entering /home/omero/workspace/OMERO-test-integration/src/components/tests...
10:43:10 Entering /home/omero/workspace/OMERO-test-integration/src/components/tests/ui...
10:43:10 
10:43:10 copy-licenses:
10:43:10 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/dist
10:43:10 Created dir: /home/omero/workspace/OMERO-test-integration/src/dist/share
10:43:10 Copying 44 files to /home/omero/workspace/OMERO-test-integration/src/dist/share
10:43:10 
10:43:10 copy-history:
10:43:10 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/dist
10:43:10 
10:43:10 copy-etc:
10:43:10 Copying 28 files to /home/omero/workspace/OMERO-test-integration/src/dist/etc
10:43:10 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/dist/etc/templates
10:43:10 
10:43:10 copy-sql:
10:43:10 Copying 60 files to /home/omero/workspace/OMERO-test-integration/src/dist
10:43:16 
10:43:16 copy-server:
10:43:16 	conflict on /home/omero/workspace/OMERO-test-integration/src/dist/lib/server/janino.jar in [server]: 3.1.9 won
10:43:16 
10:43:16 copy-client:
10:43:16 Created dir: /home/omero/workspace/OMERO-test-integration/src/dist/lib/client
10:43:17 	conflict on /home/omero/workspace/OMERO-test-integration/src/dist/lib/client/janino.jar in [client]: 3.1.9 won
10:43:17 
10:43:17 update-version:
10:43:17 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/dist/etc
10:43:17 
10:43:17 create-workdirs:
10:43:17 Created dir: /home/omero/workspace/OMERO-test-integration/src/dist/etc/grid
10:43:17 Created dir: /home/omero/workspace/OMERO-test-integration/src/dist/var
10:43:17 Created dir: /home/omero/workspace/OMERO-test-integration/src/dist/var/tmp
10:43:17 
10:43:17 copy-luts:
10:43:17 Created dir: /home/omero/workspace/OMERO-test-integration/src/dist/lib/scripts/luts
10:43:17 Copying 47 files to /home/omero/workspace/OMERO-test-integration/src/dist/lib/scripts/luts
10:43:17 
10:43:17 test-compile:
10:43:17 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
10:43:17 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroFS...
10:43:17 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy...
10:43:17 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy...
10:43:17 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb...
10:43:17 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb...
10:43:17 Entering /home/omero/workspace/OMERO-test-integration/src/components/tests/ui...
10:43:17 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava...
10:43:17 
10:43:17 testng-init:
10:43:17 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:43:17 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
10:43:20 10:43:19,945 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.16
10:43:20 10:43:19,948 |-INFO in ch.qos.logback.classic.util.ContextInitializer@44459661 - No custom configurators were discovered as a service.
10:43:20 10:43:19,948 |-INFO in ch.qos.logback.classic.util.ContextInitializer@44459661 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
10:43:20 10:43:19,951 |-INFO in ch.qos.logback.classic.util.ContextInitializer@44459661 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
10:43:20 10:43:19,951 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
10:43:20 10:43:19,951 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
10:43:20 10:43:19,952 |-INFO in ch.qos.logback.classic.util.ContextInitializer@44459661 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
10:43:20 10:43:19,952 |-INFO in ch.qos.logback.classic.util.ContextInitializer@44459661 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
10:43:20 10:43:19,954 |-INFO in ch.qos.logback.classic.util.ContextInitializer@44459661 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
10:43:20 10:43:19,954 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
10:43:20 10:43:19,954 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml]
10:43:20 10:43:19,955 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@bdeda0e - Resource [logback.xml] occurs multiple times on the classpath.
10:43:20 10:43:19,955 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@bdeda0e - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml]
10:43:20 10:43:19,955 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@bdeda0e - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
10:43:20 10:43:20,136 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
10:43:20 10:43:20,136 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
10:43:20 10:43:20,152 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
10:43:20 10:43:20,154 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@7548d0d - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
10:43:20 10:43:20,154 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@7548d0d - Please move "immediateFlush" property into the enclosing appender.
10:43:20 10:43:20,207 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@7548d0d - Setting the "immediateFlush" property of the enclosing appender to true
10:43:20 10:43:20,207 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
10:43:20 10:43:20,207 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
10:43:20 10:43:20,207 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
10:43:20 10:43:20,207 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
10:43:20 10:43:20,208 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
10:43:20 10:43:20,208 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
10:43:20 10:43:20,209 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@393489c3 - End of configuration.
10:43:20 10:43:20,210 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@51aae61a - Registering current configuration as safe fallback point
10:43:20 10:43:20,210 |-INFO in ch.qos.logback.classic.util.ContextInitializer@44459661 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 256 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
10:43:20 
10:43:20 lifecycle.test-compile:
10:43:20 Copying 3 files to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/test-classes
10:43:20 Compiling 85 source files to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/test-classes
10:43:20 warning: [options] bootstrap class path not set in conjunction with -source 8
10:43:21 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/AbstractServerTest.java:61: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:43:21 import omero.grid.RawAccessRequest;
10:43:21                  ^
10:43:21 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:32: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:43:21 import omero.grid.RawAccessRequest;
10:43:21                  ^
10:43:22 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:53: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:43:22 import omero.grid.RawAccessRequest;
10:43:22                  ^
10:43:22 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:31: warning: [deprecation] ImportJob in omero.model has been deprecated
10:43:22 import omero.model.ImportJob;
10:43:22                   ^
10:43:22 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:32: warning: [deprecation] ImportJobI in omero.model has been deprecated
10:43:22 import omero.model.ImportJobI;
10:43:22                   ^
10:43:22 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ModelMockFactory.java:1206: warning: [deprecation] newInstance() in Class has been deprecated
10:43:22         IObject link = (IObject) linkClass.newInstance();
10:43:22                                           ^
10:43:22   where T is a type-variable:
10:43:22     T extends Object declared in class Class
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/CreatePojosFixture2.java:269: warning: [deprecation] newInstance() in Class has been deprecated
10:43:23         T copy = (T) obj.getClass().newInstance();
10:43:23                                    ^
10:43:23   where T is a type-variable:
10:43:23     T extends Object declared in class Class
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:43:23         RawAccessRequest raw = new RawAccessRequest();
10:43:23         ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:43:23         RawAccessRequest raw = new RawAccessRequest();
10:43:23                                    ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:419: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
10:43:23         raw.repoUuid = legacy.root().getHash().getValue();
10:43:23            ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:420: warning: [deprecation] command in RawAccessRequest has been deprecated
10:43:23         raw.command = "rm";
10:43:23            ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:421: warning: [deprecation] args in RawAccessRequest has been deprecated
10:43:23         raw.args = Arrays.asList(path);
10:43:23            ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DiskUsageTest.java:156: warning: [deprecation] newInstance() in Class has been deprecated
10:43:23         final IObject link = linkClass.newInstance();
10:43:23                                       ^
10:43:23   where T is a type-variable:
10:43:23     T extends Object declared in class Class
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DuplicationTest.java:1332: warning: [deprecation] newInstance() in Class has been deprecated
10:43:23             originalLink.setChild(annotationClass.newInstance());
10:43:23                                                  ^
10:43:23   where T is a type-variable:
10:43:23     T extends Object declared in class Class
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ImporterTest.java:1088: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
10:43:23         RoiResult r = svc.findByImage(id, new RoiOptions());
10:43:23                          ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:43:23         final RawAccessRequest request = new RawAccessRequest();
10:43:23               ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:43:23         final RawAccessRequest request = new RawAccessRequest();
10:43:23                                              ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:901: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
10:43:23         request.repoUuid = repo.root().getHash().getValue();
10:43:23                ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:902: warning: [deprecation] command in RawAccessRequest has been deprecated
10:43:23         request.command = "exists";
10:43:23                ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:903: warning: [deprecation] args in RawAccessRequest has been deprecated
10:43:23         request.args = Collections.singletonList(dirPath);
10:43:23                ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:43:23         final RawAccessRequest request = new RawAccessRequest();
10:43:23               ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:43:23         final RawAccessRequest request = new RawAccessRequest();
10:43:23                                              ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:940: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
10:43:23         request.repoUuid = repo.root().getHash().getValue();
10:43:23                ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:941: warning: [deprecation] command in RawAccessRequest has been deprecated
10:43:23         request.command = "exists";
10:43:23                ^
10:43:23 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:942: warning: [deprecation] args in RawAccessRequest has been deprecated
10:43:23         request.args = Collections.singletonList(dirName);
10:43:23                ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJob in omero.model has been deprecated
10:43:24         final ImportJob importJob = new ImportJobI();
10:43:24               ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJobI in omero.model has been deprecated
10:43:24         final ImportJob importJob = new ImportJobI();
10:43:24                                         ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:266: warning: [deprecation] setImageName(RString) in ImportJob has been deprecated
10:43:24         importJob.setImageName(omero.rtypes.rstring(name));
10:43:24                  ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:268: warning: [deprecation] setImageDescription(RString) in ImportJob has been deprecated
10:43:24         importJob.setImageDescription(omero.rtypes.rstring(desc));
10:43:24                  ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
10:43:24         ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
10:43:24         ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
10:43:24         ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
10:43:24                           ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:274: warning: [deprecation] getImageName() in ImportJob has been deprecated
10:43:24         final String savedName = sent.getImageName().getValue().toString();
10:43:24                                      ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:275: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
10:43:24         final String savedDesc = sent.getImageDescription().getValue().toString();
10:43:24                                      ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
10:43:24         final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
10:43:24               ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
10:43:24         final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
10:43:24                                               ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:278: warning: [deprecation] getImageName() in ImportJob has been deprecated
10:43:24         final String retrievedName = retrievedImportJob.getImageName().getValue().toString();
10:43:24                                                        ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:279: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
10:43:24         final String retrievedDesc = retrievedImportJob.getImageDescription().getValue().toString();
10:43:24                                                        ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:141: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24         RoiResult r = svc.findByImage(image.getId().getValue(),
10:43:24                          ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:190: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:43:24                                 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:220: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24         l = svc.getRoiMeasurements(image.getId().getValue(), options);
10:43:24                ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:241: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24         l = svc.getRoiMeasurements(image.getId().getValue(), options);
10:43:24                ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:313: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:43:24                                 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:320: warning: [deprecation] getMeasuredRoisMap(long,List<Long>,RoiOptions) in IRoiPrx has been deprecated
10:43:24         Map<Long, RoiResult> values = svc.getMeasuredRoisMap(image.getId()
10:43:24                                          ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:386: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:43:24                                 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:390: warning: [deprecation] getTable(long) in IRoiPrx has been deprecated
10:43:24         table = svc.getTable(f.getId().getValue());
10:43:24                    ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:412: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24         RoiResult r = svc.findByImage(image.getId().getValue(),
10:43:24                          ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:426: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24         r = svc.findByRoi(r1.getId().getValue(), new RoiOptions());
10:43:24                ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:437: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24         r = svc.findByRoi(r2.getId().getValue(), new RoiOptions());
10:43:24                ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:448: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
10:43:24         r = svc.findByPlane(image.getId().getValue(), 1, 0, new RoiOptions());
10:43:24                ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:459: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
10:43:24         r = svc.findByPlane(image.getId().getValue(), 1, 1, new RoiOptions());
10:43:24                ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24             null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
10:43:24                   ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24             null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
10:43:24                                   ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24             new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
10:43:24                                    ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24             new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
10:43:24                                                    ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Long(long) in Long has been deprecated and marked for removal
10:43:24             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
10:43:24                                       ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
10:43:24                                                        ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
10:43:24                                                                        ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24         inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
10:43:24                                        ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24         inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
10:43:24                                                         ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24         inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
10:43:24                                        ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24         inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
10:43:24                                                        ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
10:43:24                                        ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
10:43:24                                                        ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
10:43:24                                        ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
10:43:24                                                        ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
10:43:24                                        ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:43:24         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
10:43:24                                                        ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:755: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
10:43:24                 svc.getShapeStatsRestricted(
10:43:24                    ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:764: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
10:43:24         final ShapeStats [] stats = svc.getShapeStatsRestricted(ids, 0, 0, new int[] {0});
10:43:24                                        ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java:1030: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:43:24         projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
10:43:24                                      ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:478: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
10:43:24         request.typesToIgnore = Collections.singletonList("TagAnnotation");
10:43:24                ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:495: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
10:43:24         request.typesToIgnore = Collections.singletonList("IAnnotationLink");
10:43:24                ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:501: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
10:43:24         request.typesToIgnore = Collections.singletonList("Annotation");
10:43:24                ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:547: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
10:43:24                     request.typesToIgnore = Collections.singletonList("Annotation");
10:43:24                            ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/HierarchyDeleteTest.java:537: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:43:24         projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
10:43:24                                      ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:37: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:43:24         p2.setRelatedTo(p1);
10:43:24           ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:39: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:43:24         Assert.assertEquals(p1.getId(), p2.getRelatedTo().getId());
10:43:24                                           ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:66: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:43:24         pixels1.setRelatedTo(pixels2);
10:43:24                ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:68: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:43:24         Pixels pixels = pixels1.getRelatedTo();
10:43:24                                ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:88: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:43:24         Assert.assertNull(pixels1.getRelatedTo());
10:43:24                                  ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:106: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:43:24         pixels1.setRelatedTo(pixels2);
10:43:24                ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:108: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:43:24         Pixels pixels = pixels1.getRelatedTo();
10:43:24                                ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:128: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:43:24         Assert.assertNull(pixels1.getRelatedTo());
10:43:24                                  ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:113: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:43:24                                 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:147: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24         l = svc.getRoiMeasurements(image.getId().getValue(), options);
10:43:24                ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:186: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:43:24                                 ^
10:43:24 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:221: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:43:24         l = svc.getRoiMeasurements(image.getId().getValue(), options);
10:43:24                ^
10:43:25 Note: Some input files use unchecked or unsafe operations.
10:43:25 Note: Recompile with -Xlint:unchecked for details.
10:43:25 88 warnings
10:43:25 Deleting: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/_omero_build_1760283415.tmp
10:43:25 Building jar: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/OmeroJava-test.jar
10:43:25 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
10:43:25 :: delivering :: omero#OmeroJava-test;working@57f60e06d356 :: 5.6.3-581-fe5e08de73-ice36-b19-ice36 :: integration :: Thu Jan 15 10:43:17 UTC 2026
10:43:25 	delivering ivy file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/OmeroJava-test.xml
10:43:25 :: publishing :: omero#OmeroJava-test
10:43:25 	published OmeroJava-test to /home/omero/workspace/OMERO-test-integration/src/target/test-repository/OmeroJava-test-5.6.3-581-fe5e08de73-ice36-b19-ice36.jar
10:43:25 	published ivy to /home/omero/workspace/OMERO-test-integration/src/target/test-repository/OmeroJava-test-5.6.3-581-fe5e08de73-ice36-b19-ice36.xml
10:43:25 
10:43:25 BUILD SUCCESSFUL
10:43:25 Total time: 52 seconds
10:43:25 + OMERO_DIST=/home/omero/workspace/OMERO-test-integration/src/dist
10:43:25 + export OMERODIR=/home/omero/workspace/OMERO-test-integration/src/dist
10:43:25 + OMERODIR=/home/omero/workspace/OMERO-test-integration/src/dist
10:43:25 + omero config set omero.db.name OMERO-test-integration
10:43:26 + omero config set omero.db.host pg
10:43:27 + omero config set omero.db.user postgres
10:43:27 + omero config set omero.db.poolsize 50
10:43:28 + omero config set omero.jvmcfg.max_system_memory.blitz 64000
10:43:29 + omero config set omero.data.dir /home/omero/workspace/OMERO-test-integration/data
10:43:30 + omero config set omero.ports.prefix 1
10:43:31 + omero config set omero.web.server_list '[["testintegration",14064,"testintegration"]]'
10:43:32 + omero certificates
10:43:32 OpenSSL 3.5.1 1 Jul 2025 (Library: OpenSSL 3.5.1 1 Jul 2025)
10:43:33 certificates created: /home/omero/workspace/OMERO-test-integration/data/certs/server.key /home/omero/workspace/OMERO-test-integration/data/certs/server.pem /home/omero/workspace/OMERO-test-integration/data/certs/server.p12
10:43:33 + createdb -h pg -U postgres OMERO-test-integration
10:43:33 + omero db script -f dbsetup.sql '' '' omero
10:43:33 WARNING: Positional arguments are deprecated
10:43:34 Using OMERO5.4 for version
10:43:34 Using 0 for patch
10:43:34 Using password from commandline
10:43:34 + psql -h pg -U postgres -d OMERO-test-integration -f dbsetup.sql
10:43:34 BEGIN
10:43:34 CREATE FUNCTION
10:43:34 CREATE FUNCTION
10:43:34  assert_db_server_prerequisites 
10:43:34 --------------------------------
10:43:34  
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10:43:34 
10:43:34 DROP FUNCTION
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10:43:34 CREATE DOMAIN
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10:43:35 psql:dbsetup.sql:2842: NOTICE:  identifier "fkcontraststretchingcontext_codomainmapcontext_id_codomainmapcontext" will be truncated to "fkcontraststretchingcontext_codomainmapcontext_id_codomainmapco"
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10:43:35 psql:dbsetup.sql:5697: NOTICE:  identifier "fkreverseintensitycontext_codomainmapcontext_id_codomainmapcontext" will be truncated to "fkreverseintensitycontext_codomainmapcontext_id_codomainmapcont"
10:43:35 ALTER TABLE
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10:43:36 CREATE FUNCTION
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10:43:36 CREATE INDEX
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10:43:36 CREATE FUNCTION
10:43:36 SET CONSTRAINTS
10:43:36 CREATE FUNCTION
10:43:36 CREATE SEQUENCE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 CREATE INDEX
10:43:36 CREATE FUNCTION
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
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10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
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10:43:36 INSERT 0 1
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10:43:36 INSERT 0 1
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10:43:36 INSERT 0 1
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10:43:36 INSERT 0 1
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10:43:36 INSERT 0 1
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10:43:36 INSERT 0 1
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10:43:36 INSERT 0 1
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10:43:36 INSERT 0 1
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10:43:36 INSERT 0 1
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10:43:36 INSERT 0 1
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10:43:36 INSERT 0 1
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10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE SEQUENCE
10:43:36 INSERT 0 1
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE TABLE
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
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10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 INSERT 0 1
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
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10:43:36 INSERT 0 1
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10:43:36 UPDATE 1
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10:43:36 ALTER TABLE
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10:43:36 CREATE INDEX
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 ALTER TABLE
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
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10:43:36 CREATE TABLE
10:43:36 INSERT 0 1
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10:43:36 CREATE FUNCTION
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10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE TABLE
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE INDEX
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 DROP TABLE
10:43:36 DROP TABLE
10:43:36 DROP TABLE
10:43:36 DROP TABLE
10:43:36 DROP TABLE
10:43:36 CREATE VIEW
10:43:36 CREATE VIEW
10:43:36 CREATE VIEW
10:43:36 CREATE VIEW
10:43:36 CREATE VIEW
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 ALTER TABLE
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE TABLE
10:43:36 CREATE INDEX
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE FUNCTION
10:43:36 CREATE FUNCTION
10:43:36 CREATE TRIGGER
10:43:36 CREATE TRIGGER
10:43:36 CREATE INDEX
10:43:36 UPDATE 1
10:43:36 COMMIT
10:43:36 + rm dbsetup.sql
10:43:36 + export OMERO_PROFILE=/home/omero/workspace/OMERO-test-integration/config
10:43:36 + OMERO_PROFILE=/home/omero/workspace/OMERO-test-integration/config
10:43:36 + mkdir -p /home/omero/workspace/OMERO-test-integration/config/blitz
10:43:36 + cp /home/omero/workspace/OMERO-test-integration/src/dist/etc/blitz/mail-senders.example /home/omero/workspace/OMERO-test-integration/src/dist/etc/blitz/mail-server.example /home/omero/workspace/OMERO-test-integration/config/blitz
10:43:36 + for f in $OMERO_PROFILE/blitz/*
10:43:36 ++ basename /home/omero/workspace/OMERO-test-integration/config/blitz/mail-senders.example .example
10:43:36 + mv /home/omero/workspace/OMERO-test-integration/config/blitz/mail-senders.example /home/omero/workspace/OMERO-test-integration/config/blitz/mail-senders.xml
10:43:36 + for f in $OMERO_PROFILE/blitz/*
10:43:36 ++ basename /home/omero/workspace/OMERO-test-integration/config/blitz/mail-server.example .example
10:43:36 + mv /home/omero/workspace/OMERO-test-integration/config/blitz/mail-server.example /home/omero/workspace/OMERO-test-integration/config/blitz/mail-server.xml
10:43:36 + omero config set omero.mail.config true
10:43:37 + omero config set omero.mail.fake true
10:43:38 + omero config set omero.mail.port 2525
10:43:39 + BUILD_ID=DONT_KILL_ME
10:43:39 + omero admin start
10:43:43 No descriptor given. Using etc/grid/default.xml
10:43:45 Creating /home/omero/workspace/OMERO-test-integration/src/dist/var/master
10:43:45 Initializing /home/omero/workspace/OMERO-test-integration/src/dist/var/log
10:43:45 Creating /home/omero/workspace/OMERO-test-integration/src/dist/var/registry
10:43:45 Waiting on startup. Use CTRL-C to exit
10:43:45 .......................Build was aborted
10:47:29 Aborted by devspace
10:47:29 Recording test results
10:47:29 Terminated
10:47:30 ERROR: Step ‘Publish JUnit test result report’ failed: No test report files were found. Configuration error?
10:47:30 Build Aborted. Not looking for any TestNG results.
10:47:30 Finished: ABORTED