serverExceptionClass = ome.conditions.SecurityViolation
message = User 4743 is not a member of group 3688 and cannot login
}
INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4744, group=3688, script=5017
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 857, in willAccept
file, handle = self.lookup(scriptContext)
^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 829, in lookup
file = prx.validateScript(job, self.accepts_list)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 40, in handler
return func(*args, **kwargs)
^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
omero.ValidationException: exception ::omero::ValidationException
{
serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
at jdk.internal.reflect.GeneratedMethodAccessor265.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:283)
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy74.doWork(Unknown Source)
at ome.services.util.Executor$Impl.execute(Executor.java:447)
at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
at ome.services.throttling.Callback2.run(Callback2.java:43)
at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
at jdk.internal.reflect.GeneratedMethodAccessor651.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at omero.cmd.CallContext.invoke(CallContext.java:85)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy105.validateScript_async(Unknown Source)
at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
at IceInternal.Incoming.invoke(Incoming.java:221)
at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
at Ice.ConnectionI.message(ConnectionI.java:1056)
at IceInternal.ThreadPool.run(ThreadPool.java:395)
at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
at java.base/java.lang.Thread.run(Thread.java:829)
serverExceptionClass = ome.conditions.ValidationException
message = Found wrong number of files: []
}
INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
INFO omero.remote:decorators.py:75 Rslt: <class 'bool'>
INFO omero.processor.ProcessorI:__init__.py:597 Cleaning up
INFO omero.processor.ProcessorI:__init__.py:599 Done
INFO omero.util.Resources:__init__.py:669 Halted
_____________________________ TestScripts.test3527 _____________________________
self = <test.integration.test_scripts.TestScripts object at 0x7f0c9510d290>
@pytest.mark.broken(ticket="11610")
def test3527(self):
SCRIPT = """if True:
import omero.scripts
import omero.rtypes
client = omero.scripts.client("ticket3527", \
omero.scripts.Long("gid", out=True))
ec = client.sf.getAdminService().getEventContext()
gid = ec.groupId
client.setOutput("gid", omero.rtypes.rlong(gid))
"""
impl = omero.processor.usermode_processor(self.client)
svc = self.client.sf.getScriptService()
try:
scriptID = svc.uploadScript("/test/test3527", SCRIPT)
> process = svc.runScript(scriptID, {}, None)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
test/integration/test_scripts.py:528:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = 24ffcc82-324e-44bb-a306-275608adf594/ba0cbd18-cc29-488e-9dab-f8efc0dfa03fomero.api.IScript -t -e 1.1:tcp -h 172.18.0.9 -p 34143 -t 60000
scriptID = 6236, inputs = {}, waitSecs = None, _ctx = None
def runScript(self, scriptID, inputs, waitSecs, _ctx=None):
> return _M_omero.api.IScript._op_runScript.invoke(self, ((scriptID, inputs, waitSecs), _ctx))
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
E omero.NoProcessorAvailable: exception ::omero::NoProcessorAvailable
E {
E serverStackTrace =
E serverExceptionClass =
E message = No processor available! [0 response(s)]
E processorCount = 0
E }
../../../../.venv3/lib64/python3.11/site-packages/omero_api_IScript_ice.py:935: NoProcessorAvailable
------------------------------ Captured log call -------------------------------
INFO omero.util.Resources:__init__.py:652 Starting
INFO omero.processor.ProcessorI:processor.py:814 Registering processor ln>k[x6w&O}{J51ZMbc9/UsermodeProcessor-dd735729-e8d4-4056-96b8-3851f771e4c1 -t -e 1.1:tcp -h 127.0.0.1 -p 33909 -t 60000
INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4743, group=3687, script=5018
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 857, in willAccept
file, handle = self.lookup(scriptContext)
^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 829, in lookup
file = prx.validateScript(job, self.accepts_list)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 40, in handler
return func(*args, **kwargs)
^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
omero.ValidationException: exception ::omero::ValidationException
{
serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
at jdk.internal.reflect.GeneratedMethodAccessor265.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:283)
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy74.doWork(Unknown Source)
at ome.services.util.Executor$Impl.execute(Executor.java:447)
at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
at ome.services.throttling.Callback2.run(Callback2.java:43)
at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
at jdk.internal.reflect.GeneratedMethodAccessor651.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at omero.cmd.CallContext.invoke(CallContext.java:85)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy105.validateScript_async(Unknown Source)
at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
at IceInternal.Incoming.invoke(Incoming.java:221)
at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
at Ice.ConnectionI.message(ConnectionI.java:1056)
at IceInternal.ThreadPool.run(ThreadPool.java:395)
at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
at java.base/java.lang.Thread.run(Thread.java:829)
serverExceptionClass = ome.conditions.ValidationException
message = Found wrong number of files: []
}
ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4743, group=3687, script=5018
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 857, in willAccept
file, handle = self.lookup(scriptContext)
^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 829, in lookup
file = prx.validateScript(job, self.accepts_list)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 40, in handler
return func(*args, **kwargs)
^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
omero.ValidationException: exception ::omero::ValidationException
{
serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
at jdk.internal.reflect.GeneratedMethodAccessor265.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:283)
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy74.doWork(Unknown Source)
at ome.services.util.Executor$Impl.execute(Executor.java:447)
at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
at ome.services.throttling.Callback2.run(Callback2.java:43)
at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
at jdk.internal.reflect.GeneratedMethodAccessor651.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at omero.cmd.CallContext.invoke(CallContext.java:85)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy105.validateScript_async(Unknown Source)
at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
at IceInternal.Incoming.invoke(Incoming.java:221)
at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
at Ice.ConnectionI.message(ConnectionI.java:1056)
at IceInternal.ThreadPool.run(ThreadPool.java:395)
at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
at java.base/java.lang.Thread.run(Thread.java:829)
serverExceptionClass = ome.conditions.ValidationException
message = Found wrong number of files: []
}
INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4743, group=3687, script=5018
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 857, in willAccept
file, handle = self.lookup(scriptContext)
^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 829, in lookup
file = prx.validateScript(job, self.accepts_list)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 40, in handler
return func(*args, **kwargs)
^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
omero.ValidationException: exception ::omero::ValidationException
{
serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
at jdk.internal.reflect.GeneratedMethodAccessor265.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:283)
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy74.doWork(Unknown Source)
at ome.services.util.Executor$Impl.execute(Executor.java:447)
at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
at ome.services.throttling.Callback2.run(Callback2.java:43)
at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
at jdk.internal.reflect.GeneratedMethodAccessor651.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at omero.cmd.CallContext.invoke(CallContext.java:85)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy105.validateScript_async(Unknown Source)
at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
at IceInternal.Incoming.invoke(Incoming.java:221)
at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
at Ice.ConnectionI.message(ConnectionI.java:1056)
at IceInternal.ThreadPool.run(ThreadPool.java:395)
at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
at java.base/java.lang.Thread.run(Thread.java:829)
serverExceptionClass = ome.conditions.ValidationException
message = Found wrong number of files: []
}
INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4743, group=3687, script=5018
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 857, in willAccept
file, handle = self.lookup(scriptContext)
^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 829, in lookup
file = prx.validateScript(job, self.accepts_list)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 40, in handler
return func(*args, **kwargs)
^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
omero.ValidationException: exception ::omero::ValidationException
{
serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
at jdk.internal.reflect.GeneratedMethodAccessor265.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:283)
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy74.doWork(Unknown Source)
at ome.services.util.Executor$Impl.execute(Executor.java:447)
at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
at ome.services.throttling.Callback2.run(Callback2.java:43)
at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
at jdk.internal.reflect.GeneratedMethodAccessor651.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at omero.cmd.CallContext.invoke(CallContext.java:85)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy105.validateScript_async(Unknown Source)
at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
at IceInternal.Incoming.invoke(Incoming.java:221)
at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
at Ice.ConnectionI.message(ConnectionI.java:1056)
at IceInternal.ThreadPool.run(ThreadPool.java:395)
at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
at java.base/java.lang.Thread.run(Thread.java:829)
serverExceptionClass = ome.conditions.ValidationException
message = Found wrong number of files: []
}
INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept
ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4743, group=3687, script=5019
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 857, in willAccept
file, handle = self.lookup(scriptContext)
^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 829, in lookup
file = prx.validateScript(job, self.accepts_list)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 40, in handler
return func(*args, **kwargs)
^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
omero.ValidationException: exception ::omero::ValidationException
{
serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
at jdk.internal.reflect.GeneratedMethodAccessor265.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:283)
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy74.doWork(Unknown Source)
at ome.services.util.Executor$Impl.execute(Executor.java:447)
at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
at ome.services.throttling.Callback2.run(Callback2.java:43)
at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
at jdk.internal.reflect.GeneratedMethodAccessor651.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at omero.cmd.CallContext.invoke(CallContext.java:85)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy105.validateScript_async(Unknown Source)
at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
at IceInternal.Incoming.invoke(Incoming.java:221)
at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
at Ice.ConnectionI.message(ConnectionI.java:1056)
at IceInternal.ThreadPool.run(ThreadPool.java:395)
at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
at java.base/java.lang.Thread.run(Thread.java:829)
serverExceptionClass = ome.conditions.ValidationException
message = Found wrong number of files: []
}
ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4743, group=3687, script=5019
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 857, in willAccept
file, handle = self.lookup(scriptContext)
^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 829, in lookup
file = prx.validateScript(job, self.accepts_list)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 40, in handler
return func(*args, **kwargs)
^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
omero.ValidationException: exception ::omero::ValidationException
{
serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
at jdk.internal.reflect.GeneratedMethodAccessor265.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:283)
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy74.doWork(Unknown Source)
at ome.services.util.Executor$Impl.execute(Executor.java:447)
at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
at ome.services.throttling.Callback2.run(Callback2.java:43)
at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
at jdk.internal.reflect.GeneratedMethodAccessor651.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at omero.cmd.CallContext.invoke(CallContext.java:85)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy105.validateScript_async(Unknown Source)
at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
at IceInternal.Incoming.invoke(Incoming.java:221)
at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
at Ice.ConnectionI.message(ConnectionI.java:1056)
at IceInternal.ThreadPool.run(ThreadPool.java:395)
at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
at java.base/java.lang.Thread.run(Thread.java:829)
serverExceptionClass = ome.conditions.ValidationException
message = Found wrong number of files: []
}
INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4743, group=3687, script=5019
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 857, in willAccept
file, handle = self.lookup(scriptContext)
^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 829, in lookup
file = prx.validateScript(job, self.accepts_list)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 40, in handler
return func(*args, **kwargs)
^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
omero.ValidationException: exception ::omero::ValidationException
{
serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
at jdk.internal.reflect.GeneratedMethodAccessor265.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:283)
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy74.doWork(Unknown Source)
at ome.services.util.Executor$Impl.execute(Executor.java:447)
at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
at ome.services.throttling.Callback2.run(Callback2.java:43)
at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
at jdk.internal.reflect.GeneratedMethodAccessor651.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at omero.cmd.CallContext.invoke(CallContext.java:85)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy105.validateScript_async(Unknown Source)
at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
at IceInternal.Incoming.invoke(Incoming.java:221)
at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
at Ice.ConnectionI.message(ConnectionI.java:1056)
at IceInternal.ThreadPool.run(ThreadPool.java:395)
at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
at java.base/java.lang.Thread.run(Thread.java:829)
serverExceptionClass = ome.conditions.ValidationException
message = Found wrong number of files: []
}
INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4743, group=3687, script=5019
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 857, in willAccept
file, handle = self.lookup(scriptContext)
^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 829, in lookup
file = prx.validateScript(job, self.accepts_list)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/processor.py", line 40, in handler
return func(*args, **kwargs)
^^^^^^^^^^^^^^^^^^^^^
File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript
return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx))
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
omero.ValidationException: exception ::omero::ValidationException
{
serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: []
at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577)
at jdk.internal.reflect.GeneratedMethodAccessor265.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:283)
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy74.doWork(Unknown Source)
at ome.services.util.Executor$Impl.execute(Executor.java:447)
at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570)
at ome.services.throttling.Callback2.run(Callback2.java:43)
at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80)
at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159)
at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553)
at jdk.internal.reflect.GeneratedMethodAccessor651.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at omero.cmd.CallContext.invoke(CallContext.java:85)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy105.validateScript_async(Unknown Source)
at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144)
at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704)
at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819)
at IceInternal.Incoming.invoke(Incoming.java:221)
at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
at Ice.ConnectionI.message(ConnectionI.java:1056)
at IceInternal.ThreadPool.run(ThreadPool.java:395)
at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
at java.base/java.lang.Thread.run(Thread.java:829)
serverExceptionClass = ome.conditions.ValidationException
message = Found wrong number of files: []
}
INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'>
INFO omero.processor.ProcessorI:__init__.py:597 Cleaning up
INFO omero.processor.ProcessorI:__init__.py:599 Done
INFO omero.util.Resources:__init__.py:669 Halted
_______________ TestThumbnailPerms.testPrivate10618RootWithNoCtx _______________
self = <test.integration.test_thumbnailPerms.TestThumbnailPerms object at 0x7f0c95140b50>
@pytest.mark.broken(reason="requires thumbnail work")
def testPrivate10618RootWithNoCtx(self):
"""
This would require the server to try omero.group=-1
for the user.
"""
group = self.new_group(perms="rw----")
> self.assert10618(group, self.root, True)
test/integration/test_thumbnailPerms.py:256:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
test/integration/test_thumbnailPerms.py:217: in assert10618
s = tb_prx.getThumbnailByLongestSideSet(rint(16), [pId], *ctx)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = 010a5434-4e89-4827-be4b-7389de9e6c9e/74d5d70e-6465-4b3c-aeac-d287c7924155omero.api.ThumbnailStore -t -e 1.1:tcp -h 172.18.0.9 -p 34143 -t 60000
size = object #0 (::omero::RInt)
{
_val = 16
}, pixelsIds = [2917]
_ctx = None
def getThumbnailByLongestSideSet(self, size, pixelsIds, _ctx=None):
> return _M_omero.api.ThumbnailStore._op_getThumbnailByLongestSideSet.invoke(self, ((size, pixelsIds), _ctx))
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
E omero.ResourceError: exception ::omero::ResourceError
E {
E serverStackTrace = ome.conditions.ResourceError: Error retrieving Pixels id:2917. Pixels set does not exist or the user id:0 has insufficient permissions to retrieve it.
E at ome.services.ThumbnailCtx.isExtendedGraphCritical(ThumbnailCtx.java:749)
E at ome.services.ThumbnailCtx.createAndPrepareMissingRenderingSettings(ThumbnailCtx.java:388)
E at ome.services.ThumbnailBean.getThumbnailByLongestSideSet(ThumbnailBean.java:1003)
E at jdk.internal.reflect.GeneratedMethodAccessor3877.invoke(Unknown Source)
E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
E at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
E at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:216)
E at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:200)
E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
E at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
E at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:283)
E at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
E at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
E at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
E at com.sun.proxy.$Proxy113.getThumbnailByLongestSideSet(Unknown Source)
E at jdk.internal.reflect.GeneratedMethodAccessor3877.invoke(Unknown Source)
E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
E at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
E at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
E at com.sun.proxy.$Proxy113.getThumbnailByLongestSideSet(Unknown Source)
E at jdk.internal.reflect.GeneratedMethodAccessor3913.invoke(Unknown Source)
E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
E at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
E at ome.services.throttling.Callback.run(Callback.java:56)
E at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
E at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
E at ome.services.blitz.impl.ThumbnailStoreI.getThumbnailByLongestSideSet_async(ThumbnailStoreI.java:83)
E at jdk.internal.reflect.GeneratedMethodAccessor3912.invoke(Unknown Source)
E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
E at java.base/java.lang.reflect.Method.invoke(Method.java:566)
E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
E at omero.cmd.CallContext.invoke(CallContext.java:85)
E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
E at com.sun.proxy.$Proxy114.getThumbnailByLongestSideSet_async(Unknown Source)
E at omero.api._ThumbnailStoreTie.getThumbnailByLongestSideSet_async(_ThumbnailStoreTie.java:132)
E at omero.api._ThumbnailStoreDisp.___getThumbnailByLongestSideSet(_ThumbnailStoreDisp.java:743)
E at omero.api._ThumbnailStoreDisp.__dispatch(_ThumbnailStoreDisp.java:1088)
E at IceInternal.Incoming.invoke(Incoming.java:221)
E at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
E at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
E at Ice.ConnectionI.message(ConnectionI.java:1056)
E at IceInternal.ThreadPool.run(ThreadPool.java:395)
E at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
E at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
E at java.base/java.lang.Thread.run(Thread.java:829)
E
E serverExceptionClass = ome.conditions.ResourceError
E message = Error retrieving Pixels id:2917. Pixels set does not exist or the user id:0 has insufficient permissions to retrieve it.
E }
../../../../.venv3/lib64/python3.11/site-packages/omero_api_ThumbnailStore_ice.py:730: ResourceError
___________________________ TestTickets2000.test1184 ___________________________
self = <test.integration.test_tickets2000.TestTickets2000 object at 0x7f0c94f9e0d0>
@pytest.mark.broken(ticket="11543")
def test1184(self):
uuid = self.uuid()
client = self.new_client(perms="rw----")
query = client.sf.getQueryService()
update = client.sf.getUpdateService()
admin = client.sf.getAdminService()
cont = client.sf.getContainerService()
ds = self.new_dataset(name='test1184-ds-%s' % (uuid))
for i in range(1, 2001):
img = self.new_image(name='img1184-%s' % (uuid))
ds.linkImage(img)
ds = update.saveAndReturnObject(ds)
c = cont.getCollectionCount(
ds.__class__.__name__, ("imageLinks"), [ds.id.val], None)
assert c[ds.id.val] == 2000
page = 1
p = omero.sys.Parameters()
p.map = {}
p.map["eid"] = rlong(admin.getEventContext().userId)
p.map["oid"] = rlong(ds.id.val)
if page is not None:
f = omero.sys.Filter()
f.limit = rint(24)
f.offset = rint((int(page) - 1) * 24)
p.theFilter = f
sql = "select im from Image im join fetch im.details.owner " \
"join fetch im.details.group left outer join fetch " \
"im.datasetLinks dil left outer join fetch dil.parent d " \
"where d.id = :oid and im.details.owner.id=:eid " \
"order by im.id asc"
start = time.time()
res = query.findAllByQuery(sql, p)
assert 24 == len(res)
end = time.time()
elapsed = end - start
> assert elapsed < 3.0, \
"Expected the test to complete in < 3 seconds, took: %f" % elapsed
E AssertionError: Expected the test to complete in < 3 seconds, took: 11.032140
E assert 11.032140016555786 < 3.0
test/integration/test_tickets2000.py:370: AssertionError
=============================== warnings summary ===============================
../../../../.venv3/lib64/python3.11/site-packages/django/conf/__init__.py:241
/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/django/conf/__init__.py:241: RemovedInDjango50Warning: The default value of USE_TZ will change from False to True in Django 5.0. Set USE_TZ to False in your project settings if you want to keep the current default behavior.
warnings.warn(
../../../../.venv3/lib64/python3.11/site-packages/django/conf/__init__.py:289
/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/django/conf/__init__.py:289: RemovedInDjango51Warning: The STATICFILES_STORAGE setting is deprecated. Use STORAGES instead.
warnings.warn(STATICFILES_STORAGE_DEPRECATED_MSG, RemovedInDjango51Warning)
OmeroPy/test/integration/clitest/test_import.py::TestImport::testTargetInDifferentGroup[Dataset-test.fake--d]
OmeroPy/test/integration/clitest/test_import.py::TestImport::testTargetInDifferentGroup[Screen-SPW&plates=1&plateRows=1&plateCols=1&fields=1&plateAcqs=1.fake--r]
/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/plugins/sessions.py:176: DeprecationWarning: OMERO_SESSION_DIR is deprecated. Use OMERO_SESSIONDIR instead.
warnings.warn(
OmeroPy/test/integration/clitest/test_import.py: 4 warnings
OmeroPy/test/integration/test_scripts.py: 8 warnings
/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/util/__init__.py:653: DeprecationWarning: isSet() is deprecated, use is_set() instead
while not ctx.stop_event.isSet():
OmeroPy/test/integration/clitest/test_import.py::TestImport::testTargetInDifferentGroup[Dataset-test.fake--d]
OmeroPy/test/integration/clitest/test_import.py::TestImport::testTargetInDifferentGroup[Screen-SPW&plates=1&plateRows=1&plateCols=1&fields=1&plateAcqs=1.fake--r]
OmeroPy/test/integration/test_scripts.py::TestScripts::testParseErrorTicket2185
OmeroPy/test/integration/test_scripts.py::TestScripts::testAutoFillTicket2326
OmeroPy/test/integration/test_scripts.py::TestScripts::testParamLoadingPerformanceTicket2285
OmeroPy/test/integration/test_scripts.py::TestScripts::test3527
/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/util/__init__.py:697: DeprecationWarning: isSet() is deprecated, use is_set() instead
if self.stop_event.isSet():
OmeroPy/test/integration/gatewaytest/test_multi_group.py::TestHistory::testCreateHistory
OmeroPy/test/integration/gatewaytest/test_multi_group.py::TestHistory::testCreateHistory
OmeroPy/test/integration/gatewaytest/test_multi_group.py::TestScript::testRunScript
OmeroPy/test/integration/gatewaytest/test_multi_group.py::TestScript::testRunScript
OmeroPy/test/integration/gatewaytest/test_multi_group.py::TestScript::testRunScript
/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/gateway/__init__.py:4814: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead
logger.warn("%s on %s to <%s> %s(%r, %r)",
OmeroPy/test/integration/gatewaytest/test_multi_group.py::TestHistory::testCreateHistory
OmeroPy/test/integration/gatewaytest/test_multi_group.py::TestHistory::testCreateHistory
OmeroPy/test/integration/gatewaytest/test_multi_group.py::TestScript::testRunScript
OmeroPy/test/integration/gatewaytest/test_multi_group.py::TestScript::testRunScript
OmeroPy/test/integration/gatewaytest/test_performance.py::TestPerformance::testListFileAnnotations
OmeroPy/test/integration/gatewaytest/test_performance.py::TestPerformance::testListFileAnnotations
OmeroPy/test/integration/gatewaytest/test_user.py::TestUser::testCrossGroupRead
OmeroPy/test/integration/gatewaytest/test_user.py::TestUser::testCrossGroupRead
/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/callbacks.py:270: DeprecationWarning: isSet() is deprecated, use is_set() instead
return self.event.isSet()
OmeroPy/test/integration/scriptstest/test_ping.py::TestPing::testProcessCallback
OmeroPy/test/integration/scriptstest/test_ping.py::TestPing::testProcessCallback
/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/callbacks.py:89: DeprecationWarning: isSet() is deprecated, use is_set() instead
if self.event.isSet():
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
- generated xml file: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/target/reports/broken/junit-results.xml -
=========================== short test summary info ============================
FAILED test/integration/clitest/test_fs.py::TestFS::testRenameAdminOnly - AssertionError: assert False
+ where False = <built-in method endswith of str object at 0x7f0c900fc8f0>('SecurityViolation: Admins only!\n')
+ where <built-in method endswith of str object at 0x7f0c900fc8f0> = 'disabled since OMERO 5.4.7 due to Pixels.path bug\n'.endswith
FAILED test/integration/clitest/test_import.py::TestImport::testTargetInDifferentGroup[Dataset-test.fake--d] - omero.cli.NonZeroReturnCode: assert failed
FAILED test/integration/clitest/test_import.py::TestImport::testTargetInDifferentGroup[Screen-SPW&plates=1&plateRows=1&plateCols=1&fields=1&plateAcqs=1.fake--r] - omero.cli.NonZeroReturnCode: assert failed
FAILED test/integration/gatewaytest/test_multi_group.py::TestHistory::testCreateHistory - AssertionError: Logs count should match number of objects
assert 1 == 0
FAILED test/integration/gatewaytest/test_multi_group.py::TestScript::testRunScript - omero.NoProcessorAvailable: exception ::omero::NoProcessorAvailable
{
serverStackTrace =
serverExceptionClass =
message = No processor available! [0 response(s)]
processorCount = 0
}
FAILED test/integration/gatewaytest/test_performance.py::TestPerformance::testListFileAnnotations - AssertionError: Blitz listFileAnnotations() should be faster than getObjects('FileAnnotation')
assert 0.26459312438964844 < 0.15204620361328125
FAILED test/integration/gatewaytest/test_user.py::TestUser::testCrossGroupRead - assert not 2719 in [2718, 1, 2730, 2719, 2786]
+ where 2719 = getId()
+ where getId = <_ExperimenterGroupWrapper id=2719>.getId
+ and [2718, 1, 2730, 2719, 2786] = object #0 (::omero::sys::EventContext)\n{\n shareId = -1\n sessionId = 10313\n sessionUuid = d9c415e8-5323-40fd-809e-fe82ac474b15\n userId = 3728\n userName = weblitz_test_user\n sudoerId = <nil>\n sudoerName = <nil>\n groupId = 2718\n groupName = weblitz_test_user_group\n isAdmin = False\n adminPrivileges = \n {\n }\n eventId = -1\n eventType = Internal\n memberOfGroups = \n {\n [0] = 2718\n [1] = 1\n [2] = 2730\n [3] = 2719\n [4] = 2786\n }\n leaderOfGroups = \n {\n }\n groupPermissions = object #1 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -56\n }\n}.memberOfGroups
+ where object #0 (::omero::sys::EventContext)\n{\n shareId = -1\n sessionId = 10313\n sessionUuid = d9c415e8-5323-40fd-809e-fe82ac474b15\n userId = 3728\n userName = weblitz_test_user\n sudoerId = <nil>\n sudoerName = <nil>\n groupId = 2718\n groupName = weblitz_test_user_group\n isAdmin = False\n adminPrivileges = \n {\n }\n eventId = -1\n eventType = Internal\n memberOfGroups = \n {\n [0] = 2718\n [1] = 1\n [2] = 2730\n [3] = 2719\n [4] = 2786\n }\n leaderOfGroups = \n {\n }\n groupPermissions = object #1 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -56\n }\n} = getEventContext()
+ where getEventContext = <omero.gateway._BlitzGateway object at 0x7f0c90a5ecd0>.getEventContext
+ where <omero.gateway._BlitzGateway object at 0x7f0c90a5ecd0> = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0c90ac3a10>.gateway
FAILED test/integration/scriptstest/test_ping.py::TestPing::testProcessCallback - assert 0 > 0
+ where 0 = len([])
+ where [] = object #0 (::omero::grid::ProcessCallback)\n{\n}.finish
FAILED test/integration/scriptstest/test_repo.py::TestScriptRepo::testGetGroupScripts - assert 6219 in []
FAILED test/integration/tablestest/test_service.py::TestTables::test2098 - AttributeError: type object 'path' has no attribute 'path'
FAILED test/integration/tablestest/test_service.py::TestTables::testReadOnlyFile - AttributeError: 'TestTables' object has no attribute 'unique_dir'
FAILED test/integration/tablestest/test_service.py::TestTables::testReadEqual - assert [1] == [1, 2, 3, 4, 5]
Right contains 4 more items, first extra item: 2
Full diff:
[
1,
- 2,
- 3,
- 4,
- 5,
]
FAILED test/integration/tablestest/test_service.py::TestTables::testReadOutOfRange - assert [4] == [-1, 0, 1, 2, 3, 4]
At index 0 diff: 4 != -1
Right contains 5 more items, first extra item: 0
Full diff:
[
- -1,
- 0,
- 1,
- 2,
- 3,
4,
]
FAILED test/integration/test_admin.py::TestAdmin::testChangePasswordWhenUnset - omero.SecurityViolation: exception ::omero::SecurityViolation
{
serverStackTrace = ome.conditions.SecurityViolation: Old password is invalid
at ome.logic.AdminImpl.changePasswordWithOldPassword(AdminImpl.java:1253)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:283)
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy91.changePasswordWithOldPassword(Unknown Source)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy91.changePasswordWithOldPassword(Unknown Source)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
at ome.services.throttling.Callback.run(Callback.java:56)
at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
at ome.services.blitz.impl.AdminI.changePasswordWithOldPassword_async(AdminI.java:144)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at omero.cmd.CallContext.invoke(CallContext.java:85)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy92.changePasswordWithOldPassword_async(Unknown Source)
at omero.api._IAdminTie.changePasswordWithOldPassword_async(_IAdminTie.java:112)
at omero.api._IAdminDisp.___changePasswordWithOldPassword(_IAdminDisp.java:1977)
at omero.api._IAdminDisp.__dispatch(_IAdminDisp.java:2229)
at IceInternal.Incoming.invoke(Incoming.java:221)
at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
at Ice.ConnectionI.message(ConnectionI.java:1056)
at IceInternal.ThreadPool.run(ThreadPool.java:395)
at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
at java.base/java.lang.Thread.run(Thread.java:829)
serverExceptionClass = ome.conditions.SecurityViolation
message = Old password is invalid
}
FAILED test/integration/test_admin.py::TestAdmin::test9193 - omero.ValidationException: exception ::omero::ValidationException
{
serverStackTrace = ome.conditions.ValidationException: experimenter cannot be a member of only the 'user' group, a different default group is also required
at ome.logic.AdminImpl.removeGroups(AdminImpl.java:813)
at jdk.internal.reflect.GeneratedMethodAccessor592.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:283)
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy91.removeGroups(Unknown Source)
at jdk.internal.reflect.GeneratedMethodAccessor592.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy91.removeGroups(Unknown Source)
at jdk.internal.reflect.GeneratedMethodAccessor3265.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
at ome.services.throttling.Callback.run(Callback.java:56)
at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
at ome.services.blitz.impl.AdminI.removeGroups_async(AdminI.java:318)
at jdk.internal.reflect.GeneratedMethodAccessor3264.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at omero.cmd.CallContext.invoke(CallContext.java:85)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy92.removeGroups_async(Unknown Source)
at omero.api._IAdminTie.removeGroups_async(_IAdminTie.java:312)
at omero.api._IAdminDisp.___removeGroups(_IAdminDisp.java:1621)
at omero.api._IAdminDisp.__dispatch(_IAdminDisp.java:2377)
at IceInternal.Incoming.invoke(Incoming.java:221)
at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
at Ice.ConnectionI.message(ConnectionI.java:1056)
at IceInternal.ThreadPool.run(ThreadPool.java:395)
at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
at java.base/java.lang.Thread.run(Thread.java:829)
serverExceptionClass = ome.conditions.ValidationException
message = experimenter cannot be a member of only the 'user' group, a different default group is also required
}
FAILED test/integration/test_files.py::TestFiles::testUploadDifferentSizeTicket2337 - omero.OptimisticLockException: exception ::omero::OptimisticLockException
{
serverStackTrace = ome.conditions.OptimisticLockException: You are not authorized to change the update event for ome.model.core.OriginalFile:Id_6224 from ome.model.meta.Event:Id_125539 to ome.model.meta.Event:Id_125538
You may need to reload the object before continuing.
at ome.security.basic.OmeroInterceptor.managedEvent(OmeroInterceptor.java:1201)
at ome.security.basic.OmeroInterceptor.checkManagedDetails(OmeroInterceptor.java:963)
at ome.security.basic.OmeroInterceptor.resetDetails(OmeroInterceptor.java:465)
at ome.security.basic.OmeroInterceptor.onFlushDirty(OmeroInterceptor.java:239)
at org.hibernate.event.def.DefaultFlushEntityEventListener.invokeInterceptor(DefaultFlushEntityEventListener.java:372)
at org.hibernate.event.def.DefaultFlushEntityEventListener.handleInterception(DefaultFlushEntityEventListener.java:349)
at org.hibernate.event.def.DefaultFlushEntityEventListener.scheduleUpdate(DefaultFlushEntityEventListener.java:287)
at org.hibernate.event.def.DefaultFlushEntityEventListener.onFlushEntity(DefaultFlushEntityEventListener.java:155)
at org.hibernate.event.def.AbstractFlushingEventListener.flushEntities(AbstractFlushingEventListener.java:219)
at org.hibernate.event.def.AbstractFlushingEventListener.flushEverythingToExecutions(AbstractFlushingEventListener.java:99)
at org.hibernate.event.def.DefaultFlushEventListener.onFlush(DefaultFlushEventListener.java:50)
at org.hibernate.impl.SessionImpl.flush(SessionImpl.java:1216)
at ome.logic.UpdateImpl.afterUpdate(UpdateImpl.java:342)
at ome.logic.UpdateImpl.doAction(UpdateImpl.java:358)
at ome.logic.UpdateImpl.doAction(UpdateImpl.java:349)
at ome.logic.UpdateImpl.saveAndReturnObject(UpdateImpl.java:135)
at jdk.internal.reflect.GeneratedMethodAccessor658.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:283)
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy94.saveAndReturnObject(Unknown Source)
at jdk.internal.reflect.GeneratedMethodAccessor658.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy94.saveAndReturnObject(Unknown Source)
at jdk.internal.reflect.GeneratedMethodAccessor1121.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
at ome.services.throttling.Callback.run(Callback.java:56)
at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:62)
at jdk.internal.reflect.GeneratedMethodAccessor1120.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at omero.cmd.CallContext.invoke(CallContext.java:85)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy95.saveAndReturnObject_async(Unknown Source)
at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92)
at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:229)
at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:423)
at IceInternal.Incoming.invoke(Incoming.java:221)
at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
at Ice.ConnectionI.message(ConnectionI.java:1056)
at IceInternal.ThreadPool.run(ThreadPool.java:395)
at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
at java.base/java.lang.Thread.run(Thread.java:829)
serverExceptionClass = ome.conditions.OptimisticLockException
message = You are not authorized to change the update event for ome.model.core.OriginalFile:Id_6224 from ome.model.meta.Event:Id_125539 to ome.model.meta.Event:Id_125538
You may need to reload the object before continuing.
backOff = 0
}
FAILED test/integration/test_ishare.py::TestIShare::test1172 - assert 0 == 1
+ where 0 = len([])
FAILED test/integration/test_itimeline.py::TestITimeline::test1225 - assert 6 == 10
+ where 6 = len({1908, 1944, 1995, 9687, 13309, 41645})
FAILED test/integration/test_permissions.py::TestPermissions::test3136 - AssertionError: elapsed1=0.015470266342163086, elapsed2=0.015842199325561523
assert 0.015470266342163086 < (0.1 * 0.015842199325561523)
FAILED test/integration/test_permissions.py::TestPermissions::testSaveWithNegOneExplicit - omero.ApiUsageException: exception ::omero::ApiUsageException
{
serverStackTrace = ome.conditions.ApiUsageException: No valid permissions available! DUMMY permissions are not intended for copying. Make sure that you have not passed omero.group=-1 for a save without context
at ome.model.internal.Permissions.<init>(Permissions.java:164)
at ome.security.basic.CurrentDetails.createDetails(CurrentDetails.java:439)
at ome.security.basic.OmeroInterceptor.newTransientDetails(OmeroInterceptor.java:700)
at ome.security.basic.OmeroInterceptor.onSave(OmeroInterceptor.java:187)
at org.hibernate.event.def.AbstractSaveEventListener.substituteValuesIfNecessary(AbstractSaveEventListener.java:413)
at org.hibernate.event.def.AbstractSaveEventListener.performSaveOrReplicate(AbstractSaveEventListener.java:292)
at org.hibernate.event.def.AbstractSaveEventListener.performSave(AbstractSaveEventListener.java:203)
at org.hibernate.event.def.AbstractSaveEventListener.saveWithGeneratedId(AbstractSaveEventListener.java:143)
at org.hibernate.event.def.DefaultMergeEventListener.saveTransientEntity(DefaultMergeEventListener.java:415)
at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:341)
at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303)
at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62)
at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154)
at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258)
at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87)
at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:84)
at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:73)
at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:867)
at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:851)
at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:855)
at ome.logic.UpdateImpl.internalMerge(UpdateImpl.java:313)
at ome.logic.UpdateImpl$2.run(UpdateImpl.java:138)
at ome.logic.UpdateImpl$2.run(UpdateImpl.java:135)
at ome.logic.UpdateImpl.doAction(UpdateImpl.java:357)
at ome.logic.UpdateImpl.doAction(UpdateImpl.java:349)
at ome.logic.UpdateImpl.saveAndReturnObject(UpdateImpl.java:135)
at jdk.internal.reflect.GeneratedMethodAccessor658.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:283)
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy94.saveAndReturnObject(Unknown Source)
at jdk.internal.reflect.GeneratedMethodAccessor658.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy94.saveAndReturnObject(Unknown Source)
at jdk.internal.reflect.GeneratedMethodAccessor1121.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
at ome.services.throttling.Callback.run(Callback.java:56)
at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:62)
at jdk.internal.reflect.GeneratedMethodAccessor1120.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at omero.cmd.CallContext.invoke(CallContext.java:85)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy95.saveAndReturnObject_async(Unknown Source)
at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92)
at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:229)
at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:423)
at IceInternal.Incoming.invoke(Incoming.java:221)
at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
at Ice.ConnectionI.message(ConnectionI.java:1056)
at IceInternal.ThreadPool.run(ThreadPool.java:395)
at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
at java.base/java.lang.Thread.run(Thread.java:829)
serverExceptionClass = ome.conditions.ApiUsageException
message = No valid permissions available! DUMMY permissions are not intended for copying. Make sure that you have not passed omero.group=-1 for a save without context
}
FAILED test/integration/test_permissions.py::TestPermissions::testSaveWithNegBadLink - omero.ApiUsageException: exception ::omero::ApiUsageException
{
serverStackTrace = ome.conditions.ApiUsageException: No valid permissions available! DUMMY permissions are not intended for copying. Make sure that you have not passed omero.group=-1 for a save without context
at ome.model.internal.Permissions.<init>(Permissions.java:164)
at ome.security.basic.CurrentDetails.createDetails(CurrentDetails.java:439)
at ome.security.basic.OmeroInterceptor.newTransientDetails(OmeroInterceptor.java:700)
at ome.security.basic.OmeroInterceptor.onSave(OmeroInterceptor.java:187)
at org.hibernate.event.def.AbstractSaveEventListener.substituteValuesIfNecessary(AbstractSaveEventListener.java:413)
at org.hibernate.event.def.AbstractSaveEventListener.performSaveOrReplicate(AbstractSaveEventListener.java:292)
at org.hibernate.event.def.AbstractSaveEventListener.performSave(AbstractSaveEventListener.java:203)
at org.hibernate.event.def.AbstractSaveEventListener.saveWithGeneratedId(AbstractSaveEventListener.java:143)
at org.hibernate.event.def.DefaultMergeEventListener.saveTransientEntity(DefaultMergeEventListener.java:415)
at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:341)
at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303)
at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62)
at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154)
at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258)
at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87)
at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:84)
at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:73)
at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:867)
at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:851)
at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:855)
at ome.logic.UpdateImpl.internalMerge(UpdateImpl.java:313)
at ome.logic.UpdateImpl$2.run(UpdateImpl.java:138)
at ome.logic.UpdateImpl$2.run(UpdateImpl.java:135)
at ome.logic.UpdateImpl.doAction(UpdateImpl.java:357)
at ome.logic.UpdateImpl.doAction(UpdateImpl.java:349)
at ome.logic.UpdateImpl.saveAndReturnObject(UpdateImpl.java:135)
at jdk.internal.reflect.GeneratedMethodAccessor658.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:283)
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy94.saveAndReturnObject(Unknown Source)
at jdk.internal.reflect.GeneratedMethodAccessor658.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy94.saveAndReturnObject(Unknown Source)
at jdk.internal.reflect.GeneratedMethodAccessor1121.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
at ome.services.throttling.Callback.run(Callback.java:56)
at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:62)
at jdk.internal.reflect.GeneratedMethodAccessor1120.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at omero.cmd.CallContext.invoke(CallContext.java:85)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy95.saveAndReturnObject_async(Unknown Source)
at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92)
at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:229)
at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:423)
at IceInternal.Incoming.invoke(Incoming.java:221)
at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
at Ice.ConnectionI.message(ConnectionI.java:1056)
at IceInternal.ThreadPool.run(ThreadPool.java:395)
at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
at java.base/java.lang.Thread.run(Thread.java:829)
serverExceptionClass = ome.conditions.ApiUsageException
message = No valid permissions available! DUMMY permissions are not intended for copying. Make sure that you have not passed omero.group=-1 for a save without context
}
FAILED test/integration/test_permissions.py::TestPermissions::testSaveBadLink - omero.SecurityViolation: exception ::omero::SecurityViolation
{
serverStackTrace = ome.conditions.SecurityViolation: You are not authorized to set the ExperimenterGroup for ome.model.annotations.TagAnnotation:Id_41800 to ome.model.meta.ExperimenterGroup:Id_3682
at ome.security.basic.OmeroInterceptor.newTransientDetails(OmeroInterceptor.java:785)
at ome.security.basic.OmeroInterceptor.onSave(OmeroInterceptor.java:187)
at org.hibernate.event.def.AbstractSaveEventListener.substituteValuesIfNecessary(AbstractSaveEventListener.java:413)
at org.hibernate.event.def.AbstractSaveEventListener.performSaveOrReplicate(AbstractSaveEventListener.java:292)
at org.hibernate.event.def.AbstractSaveEventListener.performSave(AbstractSaveEventListener.java:203)
at org.hibernate.event.def.AbstractSaveEventListener.saveWithGeneratedId(AbstractSaveEventListener.java:143)
at org.hibernate.event.def.DefaultMergeEventListener.saveTransientEntity(DefaultMergeEventListener.java:415)
at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:341)
at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303)
at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62)
at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154)
at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258)
at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87)
at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:877)
at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:859)
at org.hibernate.engine.CascadingAction$6.cascade(CascadingAction.java:279)
at org.hibernate.engine.Cascade.cascadeToOne(Cascade.java:392)
at org.hibernate.engine.Cascade.cascadeAssociation(Cascade.java:335)
at org.hibernate.engine.Cascade.cascadeProperty(Cascade.java:204)
at org.hibernate.engine.Cascade.cascade(Cascade.java:161)
at org.hibernate.event.def.AbstractSaveEventListener.cascadeBeforeSave(AbstractSaveEventListener.java:450)
at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:336)
at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303)
at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62)
at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154)
at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258)
at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87)
at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:877)
at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:859)
at org.hibernate.engine.CascadingAction$6.cascade(CascadingAction.java:279)
at org.hibernate.engine.Cascade.cascadeToOne(Cascade.java:392)
at org.hibernate.engine.Cascade.cascadeAssociation(Cascade.java:335)
at org.hibernate.engine.Cascade.cascadeProperty(Cascade.java:204)
at org.hibernate.engine.Cascade.cascadeCollectionElements(Cascade.java:425)
at org.hibernate.engine.Cascade.cascadeCollection(Cascade.java:362)
at org.hibernate.engine.Cascade.cascadeAssociation(Cascade.java:338)
at org.hibernate.engine.Cascade.cascadeProperty(Cascade.java:204)
at org.hibernate.engine.Cascade.cascade(Cascade.java:161)
at org.hibernate.event.def.AbstractSaveEventListener.cascadeAfterSave(AbstractSaveEventListener.java:475)
at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:388)
at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303)
at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62)
at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154)
at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258)
at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87)
at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:84)
at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:73)
at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:867)
at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:851)
at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:855)
at ome.logic.UpdateImpl.internalMerge(UpdateImpl.java:313)
at ome.logic.UpdateImpl$2.run(UpdateImpl.java:138)
at ome.logic.UpdateImpl$2.run(UpdateImpl.java:135)
at ome.logic.UpdateImpl.doAction(UpdateImpl.java:357)
at ome.logic.UpdateImpl.doAction(UpdateImpl.java:349)
at ome.logic.UpdateImpl.saveAndReturnObject(UpdateImpl.java:135)
at jdk.internal.reflect.GeneratedMethodAccessor658.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:283)
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy94.saveAndReturnObject(Unknown Source)
at jdk.internal.reflect.GeneratedMethodAccessor658.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy94.saveAndReturnObject(Unknown Source)
at jdk.internal.reflect.GeneratedMethodAccessor1121.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
at ome.services.throttling.Callback.run(Callback.java:56)
at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:62)
at jdk.internal.reflect.GeneratedMethodAccessor1120.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at omero.cmd.CallContext.invoke(CallContext.java:85)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy95.saveAndReturnObject_async(Unknown Source)
at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92)
at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:229)
at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:423)
at IceInternal.Incoming.invoke(Incoming.java:221)
at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
at Ice.ConnectionI.message(ConnectionI.java:1056)
at IceInternal.ThreadPool.run(ThreadPool.java:395)
at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
at java.base/java.lang.Thread.run(Thread.java:829)
serverExceptionClass = ome.conditions.SecurityViolation
message = You are not authorized to set the ExperimenterGroup for ome.model.annotations.TagAnnotation:Id_41800 to ome.model.meta.ExperimenterGroup:Id_3682
}
FAILED test/integration/test_permissions.py::TestPermissions::testUseOfRawFileBeanScriptReadCorrectGroupAndUser - Ice.UnknownException: exception ::Ice::UnknownException
{
unknown = ome.conditions.SecurityViolation: User 4738 is not an admin and so cannot set uid to 0
at ome.security.basic.BasicEventContext.checkAndInitialize(BasicEventContext.java:141)
at ome.security.basic.CurrentDetails.checkAndInitialize(CurrentDetails.java:317)
at ome.security.basic.BasicSecuritySystem.loadEventContext(BasicSecuritySystem.java:449)
at ome.security.basic.EventHandler.doLogin(EventHandler.java:210)
at ome.security.basic.EventHandler.invoke(EventHandler.java:146)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:283)
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy74.doWork(Unknown Source)
at ome.services.util.Executor$Impl.execute(Executor.java:447)
at ome.services.blitz.repo.RepositoryDaoImpl.getFile(RepositoryDaoImpl.java:866)
at ome.services.blitz.repo.PublicRepositoryI.checkId(PublicRepositoryI.java:823)
at ome.services.blitz.repo.PublicRepositoryI.fileById(PublicRepositoryI.java:367)
at omero.grid._RepositoryTie.fileById(_RepositoryTie.java:78)
at omero.grid._RepositoryDisp.___fileById(_RepositoryDisp.java:393)
at omero.grid._RepositoryDisp.__dispatch(_RepositoryDisp.java:538)
at IceInternal.Incoming.invoke(Incoming.java:221)
at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
at Ice.ConnectionI.message(ConnectionI.java:1056)
at IceInternal.ThreadPool.run(ThreadPool.java:395)
at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
at java.base/java.lang.Thread.run(Thread.java:829)
}
FAILED test/integration/test_rawfilestore.py::TestRFS::testTicket1961Basic - AssertionError: assert '' != ''
+ where '' = object #0 (::omero::RString)\n{\n _val = \n}.val
+ where object #0 (::omero::RString)\n{\n _val = \n} = object #0 (::omero::model::OriginalFile)\n{\n _id = object #1 (::omero::RLong)\n {\n _val = 6225\n }\n _details = object #2 (::omero::model::Details)\n {\n _owner = object #3 (::omero::model::Experimenter)\n {\n _id = object #4 (::omero::RLong)\n {\n _val = 4739\n }\n _details = <nil>\n _loaded = False\n _version = <nil>\n _groupExperimenterMapSeq = \n {\n }\n _groupExperimenterMapLoaded = False\n _omeName = <nil>\n _firstName = <nil>\n _middleName = <nil>\n _lastName = <nil>\n _institution = <nil>\n _ldap = <nil>\n _email = <nil>\n _config = \n {\n }\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n }\n _group = object #5 (::omero::model::ExperimenterGroup)\n {\n _id = object #6 (::omero::RLong)\n {\n _val = 3684\n }\n _details = object #7 (::... }\n groupPermissions = object #20 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -120\n }\n }\n }\n _loaded = True\n _version = <nil>\n _pixelsFileMapsSeq = \n {\n }\n _pixelsFileMapsLoaded = False\n _pixelsFileMapsCountPerOwner = \n {\n }\n _path = object #21 (::omero::RString)\n {\n _val = /tmp/test\n }\n _repo = <nil>\n _size = object #22 (::omero::RLong)\n {\n _val = 4\n }\n _atime = <nil>\n _mtime = object #23 (::omero::RTime)\n {\n _val = 1751167717478\n }\n _ctime = <nil>\n _hasher = <nil>\n _hash = object #24 (::omero::RString)\n {\n _val = \n }\n _mimetype = object #25 (::omero::RString)\n {\n _val = application/octet-stream\n }\n _filesetEntriesSeq = \n {\n }\n _filesetEntriesLoaded = True\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n _name = object #26 (::omero::RString)\n {\n _val = test\n }\n}.hash
FAILED test/integration/test_rawfilestore.py::TestRFS::testTicket1961WithKillSession - AssertionError: assert '' != ''
+ where '' = object #0 (::omero::RString)\n{\n _val = \n}.val
+ where object #0 (::omero::RString)\n{\n _val = \n} = object #0 (::omero::model::OriginalFile)\n{\n _id = object #1 (::omero::RLong)\n {\n _val = 6226\n }\n _details = object #2 (::omero::model::Details)\n {\n _owner = object #3 (::omero::model::Experimenter)\n {\n _id = object #4 (::omero::RLong)\n {\n _val = 4739\n }\n _details = <nil>\n _loaded = False\n _version = <nil>\n _groupExperimenterMapSeq = \n {\n }\n _groupExperimenterMapLoaded = False\n _omeName = <nil>\n _firstName = <nil>\n _middleName = <nil>\n _lastName = <nil>\n _institution = <nil>\n _ldap = <nil>\n _email = <nil>\n _config = \n {\n }\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n }\n _group = object #5 (::omero::model::ExperimenterGroup)\n {\n _id = object #6 (::omero::RLong)\n {\n _val = 3684\n }\n _details = object #7 (::... }\n groupPermissions = object #20 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -120\n }\n }\n }\n _loaded = True\n _version = <nil>\n _pixelsFileMapsSeq = \n {\n }\n _pixelsFileMapsLoaded = False\n _pixelsFileMapsCountPerOwner = \n {\n }\n _path = object #21 (::omero::RString)\n {\n _val = /tmp/test\n }\n _repo = <nil>\n _size = object #22 (::omero::RLong)\n {\n _val = 4\n }\n _atime = <nil>\n _mtime = object #23 (::omero::RTime)\n {\n _val = 1751167717546\n }\n _ctime = <nil>\n _hasher = <nil>\n _hash = object #24 (::omero::RString)\n {\n _val = \n }\n _mimetype = object #25 (::omero::RString)\n {\n _val = application/octet-stream\n }\n _filesetEntriesSeq = \n {\n }\n _filesetEntriesLoaded = True\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n _name = object #26 (::omero::RString)\n {\n _val = test\n }\n}.hash
FAILED test/integration/test_rawfilestore.py::TestRFS::testTicket2161Save - AssertionError: assert '' != ''
+ where '' = object #0 (::omero::RString)\n{\n _val = \n}.val
+ where object #0 (::omero::RString)\n{\n _val = \n} = object #0 (::omero::model::OriginalFile)\n{\n _id = object #1 (::omero::RLong)\n {\n _val = 6227\n }\n _details = object #2 (::omero::model::Details)\n {\n _owner = object #3 (::omero::model::Experimenter)\n {\n _id = object #4 (::omero::RLong)\n {\n _val = 4739\n }\n _details = <nil>\n _loaded = False\n _version = <nil>\n _groupExperimenterMapSeq = \n {\n }\n _groupExperimenterMapLoaded = False\n _omeName = <nil>\n _firstName = <nil>\n _middleName = <nil>\n _lastName = <nil>\n _institution = <nil>\n _ldap = <nil>\n _email = <nil>\n _config = \n {\n }\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n }\n _group = object #5 (::omero::model::ExperimenterGroup)\n {\n _id = object #6 (::omero::RLong)\n {\n _val = 3684\n }\n _details = object #7 (::... }\n groupPermissions = object #20 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -120\n }\n }\n }\n _loaded = True\n _version = <nil>\n _pixelsFileMapsSeq = \n {\n }\n _pixelsFileMapsLoaded = False\n _pixelsFileMapsCountPerOwner = \n {\n }\n _path = object #21 (::omero::RString)\n {\n _val = /tmp/test\n }\n _repo = <nil>\n _size = object #22 (::omero::RLong)\n {\n _val = 4\n }\n _atime = <nil>\n _mtime = object #23 (::omero::RTime)\n {\n _val = 1751167717581\n }\n _ctime = <nil>\n _hasher = <nil>\n _hash = object #24 (::omero::RString)\n {\n _val = \n }\n _mimetype = object #25 (::omero::RString)\n {\n _val = application/octet-stream\n }\n _filesetEntriesSeq = \n {\n }\n _filesetEntriesLoaded = True\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n _name = object #26 (::omero::RString)\n {\n _val = test\n }\n}.hash
FAILED test/integration/test_rawfilestore.py::TestRFS::testNoWrite - AssertionError: assert '' != ''
+ where '' = object #0 (::omero::RString)\n{\n _val = \n}.val
+ where object #0 (::omero::RString)\n{\n _val = \n} = object #0 (::omero::model::OriginalFile)\n{\n _id = object #1 (::omero::RLong)\n {\n _val = 6228\n }\n _details = object #2 (::omero::model::Details)\n {\n _owner = object #3 (::omero::model::Experimenter)\n {\n _id = object #4 (::omero::RLong)\n {\n _val = 4740\n }\n _details = <nil>\n _loaded = False\n _version = <nil>\n _groupExperimenterMapSeq = \n {\n }\n _groupExperimenterMapLoaded = False\n _omeName = <nil>\n _firstName = <nil>\n _middleName = <nil>\n _lastName = <nil>\n _institution = <nil>\n _ldap = <nil>\n _email = <nil>\n _config = \n {\n }\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n }\n _group = object #5 (::omero::model::ExperimenterGroup)\n {\n _id = object #6 (::omero::RLong)\n {\n _val = 3685\n }\n _details = object #7 (::... }\n groupPermissions = object #20 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -56\n }\n }\n }\n _loaded = True\n _version = <nil>\n _pixelsFileMapsSeq = \n {\n }\n _pixelsFileMapsLoaded = False\n _pixelsFileMapsCountPerOwner = \n {\n }\n _path = object #21 (::omero::RString)\n {\n _val = /tmp/test\n }\n _repo = <nil>\n _size = object #22 (::omero::RLong)\n {\n _val = 4\n }\n _atime = <nil>\n _mtime = object #23 (::omero::RTime)\n {\n _val = 1751167722674\n }\n _ctime = <nil>\n _hasher = <nil>\n _hash = object #24 (::omero::RString)\n {\n _val = \n }\n _mimetype = object #25 (::omero::RString)\n {\n _val = application/octet-stream\n }\n _filesetEntriesSeq = \n {\n }\n _filesetEntriesLoaded = True\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n _name = object #26 (::omero::RString)\n {\n _val = test\n }\n}.hash
FAILED test/integration/test_reporawfilestore.py::TestRepoRawFileStore::testFailedWriteNoFile - Failed: DID NOT RAISE <class 'omero.ResourceError'>
FAILED test/integration/test_scripts.py::TestScripts::testAutoFillTicket2326 - omero.NoProcessorAvailable: exception ::omero::NoProcessorAvailable
{
serverStackTrace =
serverExceptionClass =
message = No processor available! [0 response(s)]
processorCount = 0
}
FAILED test/integration/test_scripts.py::TestScripts::testParamLoadingPerformanceTicket2285 - omero.ValidationException: exception ::omero::ValidationException
{
serverStackTrace =
serverExceptionClass =
message = Invalid parameters:
WRONG TYPE for "a": <class 'omero.rtypes.RIntI'> != <class 'omero.rtypes.RLongI'>
}
FAILED test/integration/test_scripts.py::TestScripts::test3527 - omero.NoProcessorAvailable: exception ::omero::NoProcessorAvailable
{
serverStackTrace =
serverExceptionClass =
message = No processor available! [0 response(s)]
processorCount = 0
}
FAILED test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testPrivate10618RootWithNoCtx - omero.ResourceError: exception ::omero::ResourceError
{
serverStackTrace = ome.conditions.ResourceError: Error retrieving Pixels id:2917. Pixels set does not exist or the user id:0 has insufficient permissions to retrieve it.
at ome.services.ThumbnailCtx.isExtendedGraphCritical(ThumbnailCtx.java:749)
at ome.services.ThumbnailCtx.createAndPrepareMissingRenderingSettings(ThumbnailCtx.java:388)
at ome.services.ThumbnailBean.getThumbnailByLongestSideSet(ThumbnailBean.java:1003)
at jdk.internal.reflect.GeneratedMethodAccessor3877.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at ome.security.basic.EventHandler.invoke(EventHandler.java:154)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:216)
at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:200)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:283)
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy113.getThumbnailByLongestSideSet(Unknown Source)
at jdk.internal.reflect.GeneratedMethodAccessor3877.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy113.getThumbnailByLongestSideSet(Unknown Source)
at jdk.internal.reflect.GeneratedMethodAccessor3913.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172)
at ome.services.throttling.Callback.run(Callback.java:56)
at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140)
at ome.services.blitz.impl.ThumbnailStoreI.getThumbnailByLongestSideSet_async(ThumbnailStoreI.java:83)
at jdk.internal.reflect.GeneratedMethodAccessor3912.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at omero.cmd.CallContext.invoke(CallContext.java:85)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213)
at com.sun.proxy.$Proxy114.getThumbnailByLongestSideSet_async(Unknown Source)
at omero.api._ThumbnailStoreTie.getThumbnailByLongestSideSet_async(_ThumbnailStoreTie.java:132)
at omero.api._ThumbnailStoreDisp.___getThumbnailByLongestSideSet(_ThumbnailStoreDisp.java:743)
at omero.api._ThumbnailStoreDisp.__dispatch(_ThumbnailStoreDisp.java:1088)
at IceInternal.Incoming.invoke(Incoming.java:221)
at Ice.ConnectionI.invokeAll(ConnectionI.java:2536)
at Ice.ConnectionI.dispatch(ConnectionI.java:1145)
at Ice.ConnectionI.message(ConnectionI.java:1056)
at IceInternal.ThreadPool.run(ThreadPool.java:395)
at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832)
at java.base/java.lang.Thread.run(Thread.java:829)
serverExceptionClass = ome.conditions.ResourceError
message = Error retrieving Pixels id:2917. Pixels set does not exist or the user id:0 has insufficient permissions to retrieve it.
}
FAILED test/integration/test_tickets2000.py::TestTickets2000::test1184 - AssertionError: Expected the test to complete in < 3 seconds, took: 11.032140
assert 11.032140016555786 < 3.0
==== 33 failed, 3 passed, 2008 deselected, 37 warnings in 188.12s (0:03:08) ====
!! 06/29/25 04:30:13.781 error: 4 communicators not destroyed during global destruction.
Result: 1
BUILD SUCCESSFUL
Total time: 3 minutes 10 seconds
+ /home/omero/workspace/OMERO-test-integration/src/build.py -f components/tools/OmeroJava/build.xml -Dtestng.useDefaultListeners=true -Dtestreports.dir=target/reports/broken broken
Buildfile: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/build.xml
Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava...
testng-init:
:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
:: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
03:30:17,181 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15
03:30:17,184 |-INFO in ch.qos.logback.classic.util.ContextInitializer@474749b8 - No custom configurators were discovered as a service.
03:30:17,184 |-INFO in ch.qos.logback.classic.util.ContextInitializer@474749b8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
03:30:17,188 |-INFO in ch.qos.logback.classic.util.ContextInitializer@474749b8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
03:30:17,188 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
03:30:17,189 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
03:30:17,189 |-INFO in ch.qos.logback.classic.util.ContextInitializer@474749b8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
03:30:17,189 |-INFO in ch.qos.logback.classic.util.ContextInitializer@474749b8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
03:30:17,191 |-INFO in ch.qos.logback.classic.util.ContextInitializer@474749b8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
03:30:17,192 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
03:30:17,192 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml]
03:30:17,193 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@740a0d5e - Resource [logback.xml] occurs multiple times on the classpath.
03:30:17,193 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@740a0d5e - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml]
03:30:17,193 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@740a0d5e - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
03:30:17,397 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
03:30:17,397 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
03:30:17,415 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
03:30:17,417 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@29013ef2 - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
03:30:17,417 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@29013ef2 - Please move "immediateFlush" property into the enclosing appender.
03:30:17,486 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@29013ef2 - Setting the "immediateFlush" property of the enclosing appender to true
03:30:17,487 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
03:30:17,487 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
03:30:17,487 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
03:30:17,487 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
03:30:17,487 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
03:30:17,487 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
03:30:17,488 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@265c1a7c - End of configuration.
03:30:17,490 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5b2b8d86 - Registering current configuration as safe fallback point
03:30:17,491 |-INFO in ch.qos.logback.classic.util.ContextInitializer@474749b8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 299 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
lifecycle.test-compile:
Deleting: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/_omero_build_2002447804.tmp
Deleting: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/OmeroJava-test.xml
:: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
:: delivering :: omero#OmeroJava-test;working@52bf34d160e3 :: 5.6.3-569-d9ad23d5aa-ice36-b454-ice36 :: integration :: Sun Jun 29 03:30:14 UTC 2025
delivering ivy file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/OmeroJava-test.xml
:: publishing :: omero#OmeroJava-test
published OmeroJava-test to /home/omero/workspace/OMERO-test-integration/src/target/test-repository/OmeroJava-test-5.6.3-569-d9ad23d5aa-ice36-b454-ice36.jar
published ivy to /home/omero/workspace/OMERO-test-integration/src/target/test-repository/OmeroJava-test-5.6.3-569-d9ad23d5aa-ice36-b454-ice36.xml
broken:
03:30:18,076 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15
03:30:18,079 |-INFO in ch.qos.logback.classic.util.ContextInitializer@67d48005 - No custom configurators were discovered as a service.
03:30:18,079 |-INFO in ch.qos.logback.classic.util.ContextInitializer@67d48005 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
03:30:18,080 |-INFO in ch.qos.logback.classic.util.ContextInitializer@67d48005 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
03:30:18,081 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
03:30:18,082 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
03:30:18,082 |-INFO in ch.qos.logback.classic.util.ContextInitializer@67d48005 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
03:30:18,082 |-INFO in ch.qos.logback.classic.util.ContextInitializer@67d48005 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
03:30:18,083 |-INFO in ch.qos.logback.classic.util.ContextInitializer@67d48005 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
03:30:18,084 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
03:30:18,084 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml]
03:30:18,085 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@9f116cc - Resource [logback.xml] occurs multiple times on the classpath.
03:30:18,085 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@9f116cc - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml]
03:30:18,085 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@9f116cc - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
03:30:18,272 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
03:30:18,272 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
03:30:18,279 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
03:30:18,280 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@12468a38 - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
03:30:18,280 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@12468a38 - Please move "immediateFlush" property into the enclosing appender.
03:30:18,303 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@12468a38 - Setting the "immediateFlush" property of the enclosing appender to true
03:30:18,304 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
03:30:18,304 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
03:30:18,304 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
03:30:18,304 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
03:30:18,304 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
03:30:18,304 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
03:30:18,305 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1aa7ecca - End of configuration.
03:30:18,306 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@59309333 - Registering current configuration as safe fallback point
03:30:18,306 |-INFO in ch.qos.logback.classic.util.ContextInitializer@67d48005 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 223 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
===============================================
OmeroJava.integration
Total tests run: 43, Passes: 2, Failures: 41, Skips: 0
===============================================
The tests failed.
BUILD SUCCESSFUL
Total time: 1 minute 38 seconds
+ deactivate
+ '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
+ PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
+ export PATH
+ unset _OLD_VIRTUAL_PATH
+ '[' -n '' ']'
+ hash -r
+ '[' -n '' ']'
+ unset VIRTUAL_ENV
+ unset VIRTUAL_ENV_PROMPT
+ '[' '!' '' = nondestructive ']'
+ unset -f deactivate
Recording test results
[Checks API] No suitable checks publisher found.
TestNG Reports Processing: START
Looking for TestNG results report in workspace using pattern: **/OmeroJava/target/reports/integration/*.xml
Saving reports...
Processing '/var/jenkins_home/jobs/OMERO-test-integration/builds/429/testng/testng-results.xml'
TestNG Reports Processing: FINISH
Finished: SUCCESS
