Changes

merge master -Dorg -Ssuccess-only

Repository: ome/bio-formats-build
Already up to date.

Merged PRs:
  - PR 585 dependabot[bot] 'Bump bioformats from `8bcb3c3` to `9aa0c7d`'

Repository: ome/ZarrReader
Excluded PRs:
  - PR 74 dgault 'JZarr: Add jackson.core and jackson-databind to exclsions' (exclude comment)
  - PR 73 dgault 'Update ReadMe and Change Log' (status: failure)
  - PR 20 dgault 'ZarrReader: Use chunk API' (exclude comment)
Already up to date.

Merged PRs:
  - PR 75 dgault 'Update handling and parsing of acquisition metadata'
  - PR 82 dgault 'Reintroduce S3FileSystemStore'

Repository: ome/bio-formats-documentation
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Merged PRs:
  - PR 367 jburel 'use https'
  - PR 368 dgault 'Update link for Java indent style'

Repository: ome/bio-formats-examples
Already up to date.

Merged PRs:
  - PR 69 dgault 'Add macro examples from OME 2020 NGFF workshop'

Repository: openmicroscopy/bioformats
Excluded PRs:
  - PR 4172 sbesson 'testSaneUsedFiles: check getCurrentFile is the first file in the getUsedFiles list' (stage: draft)
  - PR 4164 melissalinkert 'Reduce DICOM write time' (stage: draft)
  - PR 4131 dgault 'VirtualImagePlus: Retain B&C settings for each slice' (status: failure)
  - PR 4092 NicoKiaru 'Commits an alternative Zeiss CZI Reader' (user: NicoKiaru)
  - PR 4000 XLEFReaderForBioformats 'Reworking LMSMetadata package and adding a new lif reader' (user: XLEFReaderForBioformats)
  - PR 3898 melissalinkert 'InCell 1000/2000 field count and plane metadata fixes' (stage: draft)
  - PR 3794 dgault 'Chunk API: Add new API and functionality for reading and writing chunks' (label: exclude)
  - PR 3680 iwbh15 'Performance increase in writeIFD' (user: iwbh15)
  - PR 3618 dgault 'Memoizer: Persist caching to sub readers' (label: breaking)
  - PR 3537 dgault 'Flex: Merge IDR changes and add new group plate option' (label: exclude)
Already up to date.

Merged PRs:
  - PR 4117 ed-scanlon 'Work-around for breaking change in CellSens 4.1'
  - PR 4130 carandraug 'matlab/bfGetPlane.m: avoid use of makeDataArray2D when Octave (ome/bio-formats-octave-docker#29)'
  - PR 4147 TBlackmore 'Added support for ColumbusReader to import data with z stacks'
  - PR 4168 melissalinkert 'DICOM reader: better handling of nested sequences that include pixel data'
  - PR 4171 melissalinkert 'Add `-quality` option to bfconvert'
  - PR 4173 melissalinkert 'bfconvert: remove extra channels if `-channel` was used'
  - PR 4177 melissalinkert 'Fix some Java 9+ warnings in formats-bsd'

Repository: ome/ome-codecs
Excluded PRs:
  - PR 21 dgault 'Replace one-jai with jai-imageio-jpeg2000' (stage: draft)
Already up to date.

Repository: ome/ome-common-java
Excluded PRs:
  - PR 59 NicoKiaru 'adds AverageImageScaler implementation of IImageScaler' (user: NicoKiaru)
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Repository: ome/ome-jai
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Repository: ome/ome-mdbtools
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Repository: ome/ome-metakit
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Repository: ome/ome-model
Excluded PRs:
  - PR 180 joshmoore 'xsd-fu: templates for linkml generation' (stage: draft)
Already up to date.

Merged PRs:
  - PR 185 melissalinkert 'Add model object API to clear each list of associated objects'

Conflicting PRs (not included):
  - PR 174 jburel 'Remove docs'

Repository: ome/ome-poi
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Repository: ome/ome-stubs
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