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Summary

  1. merge master -Dorg -Ssuccess-only (details)
  2. Update component versions (details)
Commit 1cfa94b8642bb502e58682ab868ab1e863a7760f by snoopycrimecop
merge master -Dorg -Ssuccess-only

Repository: ome/bio-formats-build
Already up to date.

Merged PRs:
  - PR 604 dependabot[bot] 'Bump bio-formats-examples from `74d4def` to `9955ace`'
  - PR 608 dependabot[bot] 'Bump bioformats from `682bc7e` to `bf2c462`'
  - PR 609 dependabot[bot] 'Bump bio-formats-documentation from `afd4c11` to `7a2cfff`'

Repository: ome/ZarrReader
Excluded PRs:
  - PR 73 dgault 'Update ReadMe and Change Log' (status: failure)
  - PR 20 dgault 'ZarrReader: Use chunk API' (exclude comment)
Already up to date.

Merged PRs:
  - PR 75 dgault 'Update handling and parsing of acquisition metadata'
  - PR 82 dgault 'Reintroduce S3FileSystemStore'

Repository: ome/bio-formats-documentation
Already up to date.

Repository: ome/bio-formats-examples
Already up to date.

Merged PRs:
  - PR 69 dgault 'Add macro examples from OME 2020 NGFF workshop'
  - PR 127 jburel 'Matlab Examples'
  - PR 128 sbesson 'Relicense Bio-Formats examples under BSD 2-clause'

Repository: openmicroscopy/bioformats
Excluded PRs:
  - PR 4181 melissalinkert 'Add support for reading compressed NDPI tiles' (label: exclude)
  - PR 4180 melissalinkert 'Columbus: update to use micrometers instead of `reference frame` for positions' (label: exclude)
  - PR 4172 sbesson 'testSaneUsedFiles: check getCurrentFile is the first file in the getUsedFiles list' (stage: draft)
  - PR 4164 melissalinkert 'Reduce DICOM write time' (stage: draft)
  - PR 4131 dgault 'VirtualImagePlus: Retain B&C settings for each slice' (status: failure)
  - PR 4092 NicoKiaru 'Commits an alternative Zeiss CZI Reader' (user: NicoKiaru)
  - PR 3898 melissalinkert 'InCell 1000/2000 field count and plane metadata fixes' (stage: draft)
  - PR 3794 dgault 'Chunk API: Add new API and functionality for reading and writing chunks' (label: exclude)
  - PR 3680 iwbh15 'Performance increase in writeIFD' (user: iwbh15)
  - PR 3618 dgault 'Memoizer: Persist caching to sub readers' (label: breaking)
Already up to date.

Merged PRs:
  - PR 3537 dgault 'Flex: Merge IDR changes and add new group plate option'
  - PR 4000 XLEFReaderForBioformats 'Reworking LMSMetadata package and adding a new lif reader'
  - PR 4130 carandraug 'matlab/bfGetPlane.m: avoid use of makeDataArray2D when Octave (ome/bio-formats-octave-docker#29)'
  - PR 4188 melissalinkert 'Fix a few string comparisons, fixes #4184'

Repository: ome/ome-codecs
Already up to date.

Merged PRs:
  - PR 37 melissalinkert 'JPEG: warn if quality is outside [0.25, 1.0]'

Repository: ome/ome-common-java
Excluded PRs:
  - PR 59 NicoKiaru 'adds AverageImageScaler implementation of IImageScaler' (user: NicoKiaru)
Already up to date.

Repository: ome/ome-jai
Already up to date.

Repository: ome/ome-mdbtools
Already up to date.

Repository: ome/ome-metakit
Already up to date.

Repository: ome/ome-model
Excluded PRs:
  - PR 180 joshmoore 'xsd-fu: templates for linkml generation' (stage: draft)
Already up to date.

Conflicting PRs (not included):
  - PR 174 jburel 'Remove docs'

Repository: ome/ome-poi
Already up to date.

Repository: ome/ome-stubs
Already up to date.

Generated by BIOFORMATS-push#57 (https://merge-ci.openmicroscopy.org/jenkins/job/BIOFORMATS-push/57/)
The file was modified bioformats (diff)
The file was modified ome-metakit (diff)
The file was modified ome-model (diff)
The file was modified ome-stubs (diff)
The file was modified ome-common-java (diff)
The file was modified ZarrReader (diff)
The file was modified bio-formats-documentation (diff)
The file was modified ome-codecs (diff)
The file was modified ome-mdbtools (diff)
The file was modified bio-formats-examples (diff)
The file was modified ome-poi (diff)
The file was modified ome-jai (diff)
The file was modified .gitmodules (diff)
Commit 2d87f8305b9764024bcd576a224f0a9d066ccc5d by snoopycrimecop
Update component versions
The file was modified ome-codecs (diff)
The file was modified bio-formats-examples (diff)
The file was modified bioformats (diff)
The file was modified ome-model (diff)
The file was modified ome-poi (diff)
The file was modified ome-metakit (diff)
The file was modified bio-formats-documentation (diff)