Changes

merge master -Dorg -Ssuccess-only

Repository: ome/bio-formats-build
Already up to date.

Merged PRs:
  - PR 604 dependabot[bot] 'Bump bio-formats-examples from `74d4def` to `9955ace`'
  - PR 608 dependabot[bot] 'Bump bioformats from `682bc7e` to `bf2c462`'
  - PR 609 dependabot[bot] 'Bump bio-formats-documentation from `afd4c11` to `7a2cfff`'
  - PR 610 dependabot[bot] 'Bump ome-model from `db24e3a` to `be5b189`'
  - PR 611 dependabot[bot] 'Bump ome-codecs from `7f3130a` to `c95aee4`'

Repository: ome/ZarrReader
Excluded PRs:
  - PR 20 dgault 'ZarrReader: Use chunk API' (exclude comment)
Updating 31e9353..9a9e662
Previously merged:
  - PR 90 dgault 'Bump version to 0.5.2-SNAPSHOT'
  - PR 89 dgault 'Bump version to 0.5.1'
  - PR 88 dgault 'Add Change Log for 0.5.1'
  - PR 87 dgault 'Bump formats-api version to 7.3.0'
  - PR 86 dgault 'Bumping version to 0.5.1-SNAPSHOT'
  - PR 85 dgault 'Bump version to 0.5.0'
  - PR 84 dgault 'ChangeLog: Add missing entry for PR #75'
  - PR 75 dgault 'Update handling and parsing of acquisition metadata'
  - PR 73 dgault 'Update ReadMe and Change Log'
  - PR 82 dgault 'Reintroduce S3FileSystemStore'

Repository: ome/bio-formats-documentation
Already up to date.

Merged PRs:
  - PR 376 dgault 'Remove link to barre.dev samples'
  - PR 377 dgault 'Add trac.openmicroscopy to the ignore list'

Repository: ome/bio-formats-examples
Already up to date.

Merged PRs:
  - PR 69 dgault 'Add macro examples from OME 2020 NGFF workshop'
  - PR 127 jburel 'Matlab Examples'
  - PR 128 sbesson 'Relicense Bio-Formats examples under BSD 2-clause'

Repository: openmicroscopy/bioformats
Excluded PRs:
  - PR 4195 WalkerKnapp 'Andor SIF: Support files larger than 4 GB and with non-fixed-size footers' (user: WalkerKnapp)
  - PR 4190 melissalinkert 'Extend precompressed support to read DICOM and write TIFF/OME-TIFF' (stage: draft)
  - PR 4181 melissalinkert 'Add support for reading compressed NDPI tiles' (label: exclude)
  - PR 4180 melissalinkert 'Columbus: update to use micrometers instead of `reference frame` for positions' (label: exclude)
  - PR 4172 sbesson 'testSaneUsedFiles: check getCurrentFile is the first file in the getUsedFiles list' (stage: draft)
  - PR 4164 melissalinkert 'Reduce DICOM write time' (stage: draft)
  - PR 4131 dgault 'VirtualImagePlus: Retain B&C settings for each slice' (status: failure)
  - PR 4092 NicoKiaru 'Commits an alternative Zeiss CZI Reader' (user: NicoKiaru)
  - PR 4000 XLEFReaderForBioformats 'Reworking LMSMetadata package and adding a new lif reader' (user: XLEFReaderForBioformats)
  - PR 3898 melissalinkert 'InCell 1000/2000 field count and plane metadata fixes' (stage: draft)
  - PR 3794 dgault 'Chunk API: Add new API and functionality for reading and writing chunks' (label: exclude)
  - PR 3680 iwbh15 'Performance increase in writeIFD' (user: iwbh15)
  - PR 3618 dgault 'Memoizer: Persist caching to sub readers' (label: breaking)
  - PR 3537 dgault 'Flex: Merge IDR changes and add new group plate option' (label: exclude)
Already up to date.

Merged PRs:
  - PR 4130 carandraug 'matlab/bfGetPlane.m: avoid use of makeDataArray2D when Octave (ome/bio-formats-octave-docker#29)'
  - PR 4188 melissalinkert 'Fix a few string comparisons, fixes #4184'
  - PR 4193 dgault 'Imaris: Remove empty color entries for non 0 indexed colors'

Repository: ome/ome-codecs
Already up to date.

Merged PRs:
  - PR 37 melissalinkert 'JPEG: warn if quality is outside [0.25, 1.0]'

Repository: ome/ome-common-java
Excluded PRs:
  - PR 59 NicoKiaru 'adds AverageImageScaler implementation of IImageScaler' (user: NicoKiaru)
Already up to date.

Repository: ome/ome-jai
Already up to date.

Repository: ome/ome-mdbtools
Already up to date.

Repository: ome/ome-metakit
Already up to date.

Repository: ome/ome-model
Excluded PRs:
  - PR 180 joshmoore 'xsd-fu: templates for linkml generation' (stage: draft)
Already up to date.

Conflicting PRs (not included):
  - PR 174 jburel 'Remove docs'

Repository: ome/ome-poi
Already up to date.

Repository: ome/ome-stubs
Already up to date.

Generated by BIOFORMATS-push#96 (https://merge-ci.openmicroscopy.org/jenkins/job/BIOFORMATS-push/96/)

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