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ead0538d17692e09833e1f0935486a0dc86520af
by snoopycrimecopmerge master -Dorg -Ssuccess-only
Repository: ome/bio-formats-build
Already up to date.
Merged PRs:
- PR 616 dependabot[bot] 'Bump ZarrReader from `31e9353` to `9a9e662`'
- PR 617 dependabot[bot] 'Bump bioformats from `7ca9980` to `3b94f85`'
Repository: ome/ZarrReader
Excluded PRs:
- PR 20 dgault 'ZarrReader: Use chunk API' (exclude comment)
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Repository: ome/bio-formats-documentation
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Merged PRs:
- PR 379 dgault 'Update broken link for Maia Scientific and adding Openslide and Tronche to the ignore list'
Repository: ome/bio-formats-examples
Already up to date.
Merged PRs:
- PR 69 dgault 'Add macro examples from OME 2020 NGFF workshop'
- PR 127 jburel 'Matlab Examples'
- PR 128 sbesson 'Relicense Bio-Formats examples under BSD 2-clause'
Repository: openmicroscopy/bioformats
Excluded PRs:
- PR 4200 tstoeter 'Allow processing multiple files sequentially in a single run, with file names read from stdin.' (user: tstoeter)
- PR 4195 WalkerKnapp 'Andor SIF: Support files larger than 4 GB and with non-fixed-size footers' (user: WalkerKnapp)
- PR 4190 melissalinkert 'Extend precompressed support to read DICOM and write TIFF/OME-TIFF' (stage: draft)
- PR 4172 sbesson 'testSaneUsedFiles: check getCurrentFile is the first file in the getUsedFiles list' (stage: draft)
- PR 4164 melissalinkert 'Reduce DICOM write time' (stage: draft)
- PR 4131 dgault 'VirtualImagePlus: Retain B&C settings for each slice' (status: failure)
- PR 4092 NicoKiaru 'Commits an alternative Zeiss CZI Reader' (user: NicoKiaru)
- PR 4000 XLEFReaderForBioformats 'Reworking LMSMetadata package and adding a new lif reader' (user: XLEFReaderForBioformats)
- PR 3794 dgault 'Chunk API: Add new API and functionality for reading and writing chunks' (label: exclude)
- PR 3618 dgault 'Memoizer: Persist caching to sub readers' (label: breaking)
- PR 3537 dgault 'Flex: Merge IDR changes and add new group plate option' (label: exclude)
Already up to date.
Merged PRs:
- PR 4130 carandraug 'matlab/bfGetPlane.m: avoid use of makeDataArray2D when Octave (ome/bio-formats-octave-docker#29)'
- PR 4181 melissalinkert 'Add support for reading compressed NDPI tiles'
- PR 4193 dgault 'Imaris: Remove empty color entries for non 0 indexed colors'
- PR 4196 melissalinkert 'DICOM: use FrameTimePointer to detect timelapse data'
- PR 4198 cqian89 'SDT: fix NegativeArraySizeException when reading files recorded by SPCM64 9.90'
- PR 4202 melissalinkert 'SVS: update isThisType to reject files with a single IFD'
- PR 4203 melissalinkert 'CV7000/8000: fix used files list when TIFFs are in a subdirectory'
- PR 4205 NicoKiaru 'OIRReader: Major performance improvement when reading a ROI within a plane'
Repository: ome/ome-codecs
Already up to date.
Merged PRs:
- PR 37 melissalinkert 'JPEG: warn if quality is outside [0.25, 1.0]'
Repository: ome/ome-common-java
Excluded PRs:
- PR 59 NicoKiaru 'adds AverageImageScaler implementation of IImageScaler' (user: NicoKiaru)
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Repository: ome/ome-jai
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Repository: ome/ome-mdbtools
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Repository: ome/ome-metakit
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Repository: ome/ome-model
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Conflicting PRs (not included):
- PR 174 jburel 'Remove docs'
Repository: ome/ome-poi
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Repository: ome/ome-stubs
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Generated by BIOFORMATS-push#118 (https://merge-ci.openmicroscopy.org/jenkins/job/BIOFORMATS-push/118/)