Skip to content
[Jenkins]Jenkins
log in

Changes

Summary

  1. Bump ome-model from `8acee77` to `9b37d39` (details)
  2. Bump bio-formats-documentation from `817d09e` to `54a03db` (details)
  3. merge master -Dorg -Ssuccess-only (details)
  4. Update component versions (details)
Commit 2e9fba59ece0509ad91e57c8180ddd40ba1bf76d by noreply
Bump ome-model from `8acee77` to `9b37d39`

Bumps [ome-model](https://github.com/ome/ome-model) from `8acee77` to `9b37d39`.
- [Commits](https://github.com/ome/ome-model/compare/8acee77ac433b2ea18890f1144b941ab2dc41524...9b37d39c8e05f60cb8856fc86a9d8c79dfb8541b)

---
updated-dependencies:
- dependency-name: ome-model
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
The file was modified ome-model (diff)
Commit 25c8a87a2acf11be6278d3fb2f82540578bfac9c by noreply
Bump bio-formats-documentation from `817d09e` to `54a03db`

Bumps [bio-formats-documentation](https://github.com/ome/bio-formats-documentation) from `817d09e` to `54a03db`.
- [Commits](https://github.com/ome/bio-formats-documentation/compare/817d09ecca5e5d1fc88bf6db2d4c514a81c302e4...54a03db67dad9faf9c711030bbcbc84cf466fe35)

---
updated-dependencies:
- dependency-name: bio-formats-documentation
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
The file was modified bio-formats-documentation (diff)
Commit 5dce7d46ba8d1f11d1ba0a23e21bd8997be2a6a9 by snoopycrimecop
merge master -Dorg -Ssuccess-only

Repository: ome/bio-formats-build
Already up to date.

Merged PRs:
  - PR 586 dependabot[bot] 'Bump bioformats from `8bcb3c3` to `79e97b3`'
  - PR 587 dependabot[bot] 'Bump ome-model from `8acee77` to `9b37d39`'
  - PR 588 dependabot[bot] 'Bump bio-formats-documentation from `817d09e` to `54a03db`'

Repository: ome/ZarrReader
Excluded PRs:
  - PR 74 dgault 'JZarr: Add jackson.core and jackson-databind to exclsions' (exclude comment)
  - PR 73 dgault 'Update ReadMe and Change Log' (status: failure)
  - PR 20 dgault 'ZarrReader: Use chunk API' (exclude comment)
Already up to date.

Merged PRs:
  - PR 75 dgault 'Update handling and parsing of acquisition metadata'
  - PR 82 dgault 'Reintroduce S3FileSystemStore'

Repository: ome/bio-formats-documentation
Already up to date.

Repository: ome/bio-formats-examples
Already up to date.

Merged PRs:
  - PR 69 dgault 'Add macro examples from OME 2020 NGFF workshop'

Repository: openmicroscopy/bioformats
Excluded PRs:
  - PR 4172 sbesson 'testSaneUsedFiles: check getCurrentFile is the first file in the getUsedFiles list' (stage: draft)
  - PR 4164 melissalinkert 'Reduce DICOM write time' (stage: draft)
  - PR 4131 dgault 'VirtualImagePlus: Retain B&C settings for each slice' (status: failure)
  - PR 4092 NicoKiaru 'Commits an alternative Zeiss CZI Reader' (user: NicoKiaru)
  - PR 4000 XLEFReaderForBioformats 'Reworking LMSMetadata package and adding a new lif reader' (user: XLEFReaderForBioformats)
  - PR 3898 melissalinkert 'InCell 1000/2000 field count and plane metadata fixes' (stage: draft)
  - PR 3794 dgault 'Chunk API: Add new API and functionality for reading and writing chunks' (label: exclude)
  - PR 3680 iwbh15 'Performance increase in writeIFD' (user: iwbh15)
  - PR 3618 dgault 'Memoizer: Persist caching to sub readers' (label: breaking)
Already up to date.

Merged PRs:
  - PR 3537 dgault 'Flex: Merge IDR changes and add new group plate option'
  - PR 4130 carandraug 'matlab/bfGetPlane.m: avoid use of makeDataArray2D when Octave (ome/bio-formats-octave-docker#29)'
  - PR 4147 TBlackmore 'Added support for ColumbusReader to import data with z stacks'
  - PR 4168 melissalinkert 'DICOM reader: better handling of nested sequences that include pixel data'
  - PR 4171 melissalinkert 'Add `-quality` option to bfconvert'
  - PR 4173 melissalinkert 'bfconvert: remove extra channels if `-channel` was used'
  - PR 4177 melissalinkert 'Fix some Java 9+ warnings in formats-bsd'
  - PR 4178 melissalinkert 'Fix most Java 9+ deprecation warnings in bio-formats-plugins component'

Repository: ome/ome-codecs
Already up to date.

Repository: ome/ome-common-java
Excluded PRs:
  - PR 59 NicoKiaru 'adds AverageImageScaler implementation of IImageScaler' (user: NicoKiaru)
Already up to date.

Repository: ome/ome-jai
Already up to date.

Repository: ome/ome-mdbtools
Already up to date.

Repository: ome/ome-metakit
Already up to date.

Repository: ome/ome-model
Excluded PRs:
  - PR 180 joshmoore 'xsd-fu: templates for linkml generation' (stage: draft)
Already up to date.

Conflicting PRs (not included):
  - PR 174 jburel 'Remove docs'

Repository: ome/ome-poi
Already up to date.

Repository: ome/ome-stubs
Already up to date.

Generated by BIOFORMATS-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/BIOFORMATS-push/29/)
The file was modified ome-metakit (diff)
The file was modified ome-poi (diff)
The file was modified ome-codecs (diff)
The file was modified .gitmodules (diff)
The file was modified ome-mdbtools (diff)
The file was modified ome-common-java (diff)
The file was modified bio-formats-examples (diff)
The file was modified bioformats (diff)
The file was modified ome-model (diff)
The file was modified ome-stubs (diff)
The file was modified bio-formats-documentation (diff)
The file was modified ZarrReader (diff)
The file was modified ome-jai (diff)
Commit a2fadab2629fad79978a35a93b53a2e34f48af3f by snoopycrimecop
Update component versions
The file was modified bioformats (diff)
The file was modified bio-formats-examples (diff)
The file was modified ome-metakit (diff)
The file was modified ome-poi (diff)
The file was modified bio-formats-documentation (diff)
The file was modified ome-codecs (diff)
The file was modified ome-model (diff)