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Started by upstream project "Trigger" build number 408
originally caused by:
 Started by timer
[Pipeline] Start of Pipeline (hide)
[Pipeline] node (hide)
Still waiting to schedule task
Waiting for next available executor on ‘testintegration’
Running on testintegration in /home/omero/workspace/OMERO-insight-push
[Pipeline] { (hide)
[Pipeline] library (hide)
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
 > git --version # timeout=10
 > git --version # 'git version 2.39.2'
 > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf
The recommended git tool is: NONE
No credentials specified
 > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-insight-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
 > git --version # timeout=10
 > git --version # 'git version 2.39.2'
 > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
Commit message: "Merge pull request #17 from jburel/python3"
 > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
[Pipeline] checkout (hide)
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
Checking out Revision 5750f8f0e1f349bc34ab2ea8ebc822fa5627bb68 (refs/remotes/origin/master)
 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-insight-push/.git # timeout=10
 > git config remote.origin.url https://github.com/ome/omero-insight.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-insight.git
 > git --version # timeout=10
 > git --version # 'git version 2.43.5'
 > git fetch --tags --force --progress -- https://github.com/ome/omero-insight.git +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 5750f8f0e1f349bc34ab2ea8ebc822fa5627bb68 # timeout=10
Commit message: "Merge pull request #448 from pwalczysko/fix-gha"
 > git rev-list --no-walk 5750f8f0e1f349bc34ab2ea8ebc822fa5627bb68 # timeout=10
Cleaning workspace
[Pipeline] pwd (hide)
[Pipeline] copyArtifacts (hide)
Copied 1 artifact from "OMERO-build-push" build number 369
[Pipeline] sh (hide)
 > git rev-parse --verify HEAD # timeout=10
Resetting working tree
 > git reset --hard # timeout=10
 > git clean -fdx # timeout=10
+ pushd build
~/workspace/OMERO-insight-push/build ~/workspace/OMERO-insight-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
+ popd
~/workspace/OMERO-insight-push
+ python3 -m venv build/venv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-insight-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-insight-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ python3 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3)
Collecting pip
  Using cached pip-25.0.1-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
  Attempting uninstall: pip
    Found existing installation: pip 21.2.3
    Uninstalling pip-21.2.3:
      Successfully uninstalled pip-21.2.3
Successfully installed pip-25.0.1
+ python3 -m pip install scc
Collecting scc
  Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
  Using cached PyGithub-2.6.1-py3-none-any.whl.metadata (3.9 kB)
Collecting PyYAML>=5.1 (from scc)
  Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
Collecting future (from scc)
  Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
  Using cached ruamel.yaml-0.18.10-py3-none-any.whl.metadata (23 kB)
Collecting ruamel.yaml.jinja2 (from scc)
  Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
  Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
Collecting urllib3<2 (from scc)
  Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
  Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
  Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
  Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
  Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB)
Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc)
  Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB)
Collecting Deprecated (from PyGithub>=1.54->scc)
  Using cached Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
  Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
  Using cached cryptography-44.0.2-cp39-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB)
Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc)
  Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB)
Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached idna-3.10-py3-none-any.whl.metadata (10 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached certifi-2025.1.31-py3-none-any.whl.metadata (2.5 kB)
Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc)
  Using cached wrapt-1.17.2-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB)
Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc)
  Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached PyGithub-2.6.1-py3-none-any.whl (410 kB)
Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB)
Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached ruamel.yaml-0.18.10-py3-none-any.whl (117 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB)
Using cached requests-2.32.3-py3-none-any.whl (64 kB)
Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB)
Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB)
Using cached Deprecated-1.2.18-py2.py3-none-any.whl (10.0 kB)
Using cached certifi-2025.1.31-py3-none-any.whl (166 kB)
Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB)
Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (146 kB)
Using cached cryptography-44.0.2-cp39-abi3-manylinux_2_34_x86_64.whl (4.2 MB)
Using cached idna-3.10-py3-none-any.whl (70 kB)
Using cached wrapt-1.17.2-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (82 kB)
Using cached pycparser-2.22-py3-none-any.whl (117 kB)
Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed Deprecated-1.2.18 PyGithub-2.6.1 PyYAML-6.0.2 certifi-2025.1.31 cffi-1.17.1 charset-normalizer-3.4.1 cryptography-44.0.2 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.10 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.17.2 yaclifw-0.2.0
[Pipeline] sh (hide)
+ export BASE_REPO=omero-insight.git
+ BASE_REPO=omero-insight.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-insight-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-insight-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-insight-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-insight-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-03-20 23:00:14,471 [  scc.config] DEBUG Found github.token
2025-03-20 23:00:14,474 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:14,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-20 23:00:14,900 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:15,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-20 23:00:15,323 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:15,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-03-20 23:00:15,481 [      scc.gh] DEBUG 3588 remaining from 5000 (Reset at 23:03
2025-03-20 23:00:15,482 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-03-20 23:00:15,486 [     scc.git] DEBUG Check current status
2025-03-20 23:00:15,486 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-03-20 23:00:15,491 [     scc.git] DEBUG 5750f8f0e Merge pull request #448 from pwalczysko/fix-gha
2025-03-20 23:00:15,491 [     scc.git] DEBUG Calling 'git submodule status'
2025-03-20 23:00:15,534 [  scc.config] DEBUG Found remote.origin.url
2025-03-20 23:00:15,734 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:16,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight HTTP/1.1" 200 None
2025-03-20 23:00:16,289 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:16,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-03-20 23:00:16,752 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:16,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-03-20 23:00:17,181 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:17,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-03-20 23:00:17,623 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:18,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-03-20 23:00:18,085 [     scc.git] DEBUG Resetting...
2025-03-20 23:00:18,085 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-03-20 23:00:18,285 [     scc.git] DEBUG HEAD is now at 5750f8f0e Merge pull request #448 from pwalczysko/fix-gha
2025-03-20 23:00:18,286 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-03-20 23:00:18,326 [     scc.git] DEBUG Check current status
2025-03-20 23:00:18,326 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-03-20 23:00:18,330 [     scc.git] DEBUG 5750f8f0e Merge pull request #448 from pwalczysko/fix-gha
2025-03-20 23:00:18,331 [     scc.git] DEBUG Calling 'git submodule status'
2025-03-20 23:00:18,370 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-03-20 23:00:18,371 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-03-20 23:00:18,371 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-03-20 23:00:18,371 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-03-20 23:00:18,371 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-03-20 23:00:18,371 [    scc.repo] DEBUG ## PRs found:
2025-03-20 23:00:18,373 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:18,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/pulls HTTP/1.1" 200 None
2025-03-20 23:00:18,956 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:19,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/461 HTTP/1.1" 200 None
2025-03-20 23:00:19,216 [    scc.repo] DEBUG   - PR 461 jburel 'Update infra'
2025-03-20 23:00:19,468 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:19,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/443 HTTP/1.1" 200 None
2025-03-20 23:00:19,943 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:20,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/443/comments HTTP/1.1" 200 None
2025-03-20 23:00:20,423 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:20,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310 HTTP/1.1" 200 None
2025-03-20 23:00:20,891 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:21,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310/comments HTTP/1.1" 200 None
2025-03-20 23:00:21,246 [    scc.repo] DEBUG ## Branches found:
2025-03-20 23:00:21,246 [     scc.git] DEBUG Get sha1 of %s
2025-03-20 23:00:21,247 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-20 23:00:21,252 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-03-20 23:00:21,257 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-03-20 23:00:21,257 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-03-20 23:00:21,262 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-03-20 23:00:21,268 [     scc.git] DEBUG Already up to date.

2025-03-20 23:00:21,268 [     scc.git] DEBUG Calling 'git fetch origin pull/461/head'
2025-03-20 23:00:21,721 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2025-03-20 23:00:21,721 [     scc.git] DEBUG  * branch                refs/pull/461/head -> FETCH_HEAD
2025-03-20 23:00:21,723 [     scc.git] DEBUG ## Unique users: []
2025-03-20 23:00:21,724 [     scc.git] DEBUG Get sha1 of %s
2025-03-20 23:00:21,724 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-20 23:00:21,728 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a1328e3d106cee4b7b81467e83c1af1721ec1b4f'
2025-03-20 23:00:21,733 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-20 23:00:21,736 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 461 (Update infra) a1328e3d106cee4b7b81467e83c1af1721ec1b4f'
2025-03-20 23:00:21,758 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-20 23:00:21,761 [     scc.git] DEBUG  .github/workflows/gradle.yml | 16 ++++++++--------
2025-03-20 23:00:21,761 [     scc.git] DEBUG  build.gradle                 |  6 +++---
2025-03-20 23:00:21,761 [     scc.git] DEBUG  2 files changed, 11 insertions(+), 11 deletions(-)
2025-03-20 23:00:21,764 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:21,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-20 23:00:21,934 [     scc.git] DEBUG Calling 'git submodule update'
2025-03-20 23:00:21,978 [     scc.git] DEBUG Get sha1 of %s
2025-03-20 23:00:21,978 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-20 23:00:21,982 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-03-20 23:00:22,020 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fb76cc17f10> has no local changes
2025-03-20 23:00:22,021 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-insight
Excluded PRs:
  - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
  - PR 377 sukunis 'Fix ontology loads' (exclude comment)
  - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
Already up to date.

Merged PRs:
  - PR 461 jburel 'Update infra'

Generated by OMERO-insight-push#340 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-insight-push/340/)'
2025-03-20 23:00:22,034 [     scc.git] DEBUG [detached HEAD 020c55a77] merge master -Dorg -Snone
2025-03-20 23:00:22,035 [   scc.merge] INFO  Repository: ome/omero-insight
2025-03-20 23:00:22,035 [   scc.merge] INFO  Excluded PRs:
2025-03-20 23:00:22,035 [   scc.merge] INFO    - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
2025-03-20 23:00:22,035 [   scc.merge] INFO    - PR 377 sukunis 'Fix ontology loads' (exclude comment)
2025-03-20 23:00:22,035 [   scc.merge] INFO    - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
2025-03-20 23:00:22,035 [   scc.merge] INFO  Already up to date.
2025-03-20 23:00:22,035 [   scc.merge] INFO  
2025-03-20 23:00:22,035 [   scc.merge] INFO  Merged PRs:
2025-03-20 23:00:22,035 [   scc.merge] INFO    - PR 461 jburel 'Update infra'
2025-03-20 23:00:22,035 [   scc.merge] INFO  
2025-03-20 23:00:22,035 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-03-20 23:00:22,035 [     scc.git] DEBUG Calling 'git remote'
Merge all submodules2025-03-20 23:00:22,644 [  scc.config] DEBUG Found github.token
2025-03-20 23:00:22,647 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:22,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-20 23:00:23,062 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:23,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-20 23:00:23,475 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:23,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-03-20 23:00:23,627 [      scc.gh] DEBUG 3557 remaining from 5000 (Reset at 23:03
2025-03-20 23:00:23,628 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-03-20 23:00:23,632 [     scc.git] DEBUG Check current status
2025-03-20 23:00:23,633 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-03-20 23:00:23,636 [     scc.git] DEBUG 020c55a77 merge master -Dorg -Snone
2025-03-20 23:00:23,636 [     scc.git] DEBUG Calling 'git submodule status'
2025-03-20 23:00:23,676 [  scc.config] DEBUG Found remote.origin.url
2025-03-20 23:00:23,880 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:24,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight HTTP/1.1" 200 None
2025-03-20 23:00:24,387 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:24,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-03-20 23:00:24,851 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:25,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-03-20 23:00:25,293 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:25,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-03-20 23:00:25,726 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:25,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-03-20 23:00:25,899 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-20 23:00:25,941 [     scc.git] DEBUG Resetting...
2025-03-20 23:00:25,942 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-03-20 23:00:25,959 [     scc.git] DEBUG HEAD is now at 020c55a77 merge master -Dorg -Snone
2025-03-20 23:00:25,959 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-03-20 23:00:26,005 [     scc.git] DEBUG Check current status
2025-03-20 23:00:26,005 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-03-20 23:00:26,010 [     scc.git] DEBUG 020c55a77 merge master -Dorg -Snone
2025-03-20 23:00:26,010 [     scc.git] DEBUG Calling 'git submodule status'
2025-03-20 23:00:26,051 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-03-20 23:00:26,051 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-03-20 23:00:26,051 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-03-20 23:00:26,051 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-03-20 23:00:26,051 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-03-20 23:00:26,051 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2025-03-20 23:00:26,052 [    scc.repo] DEBUG ## PRs found:
2025-03-20 23:00:26,150 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:26,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/pulls HTTP/1.1" 200 None
2025-03-20 23:00:26,687 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:26,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/461 HTTP/1.1" 200 None
2025-03-20 23:00:27,183 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:27,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/a1328e3d106cee4b7b81467e83c1af1721ec1b4f HTTP/1.1" 200 None
2025-03-20 23:00:27,729 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:27,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/a1328e3d106cee4b7b81467e83c1af1721ec1b4f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-20 23:00:28,210 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:28,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/a1328e3d106cee4b7b81467e83c1af1721ec1b4f/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-20 23:00:28,693 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:28,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/a1328e3d106cee4b7b81467e83c1af1721ec1b4f HTTP/1.1" 200 None
2025-03-20 23:00:29,148 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:29,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/a1328e3d106cee4b7b81467e83c1af1721ec1b4f?per_page=1 HTTP/1.1" 200 None
2025-03-20 23:00:29,608 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:29,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/a1328e3d106cee4b7b81467e83c1af1721ec1b4f HTTP/1.1" 200 None
2025-03-20 23:00:30,163 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:30,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/a1328e3d106cee4b7b81467e83c1af1721ec1b4f/status HTTP/1.1" 200 None
2025-03-20 23:00:30,375 [    scc.repo] DEBUG   - PR 461 jburel 'Update infra'
2025-03-20 23:00:30,627 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:30,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/443 HTTP/1.1" 200 None
2025-03-20 23:00:31,105 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:31,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/443/comments HTTP/1.1" 200 None
2025-03-20 23:00:31,606 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:31,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310 HTTP/1.1" 200 None
2025-03-20 23:00:32,155 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:32,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310/comments HTTP/1.1" 200 None
2025-03-20 23:00:32,503 [    scc.repo] DEBUG ## Branches found:
2025-03-20 23:00:32,503 [     scc.git] DEBUG Get sha1 of %s
2025-03-20 23:00:32,503 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-20 23:00:32,512 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-03-20 23:00:32,516 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-03-20 23:00:32,516 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-03-20 23:00:32,520 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-03-20 23:00:32,525 [     scc.git] DEBUG Already up to date.

2025-03-20 23:00:32,525 [     scc.git] DEBUG Calling 'git fetch origin pull/461/head'
2025-03-20 23:00:32,861 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2025-03-20 23:00:32,861 [     scc.git] DEBUG  * branch                refs/pull/461/head -> FETCH_HEAD
2025-03-20 23:00:32,866 [     scc.git] DEBUG ## Unique users: []
2025-03-20 23:00:32,866 [     scc.git] DEBUG Get sha1 of %s
2025-03-20 23:00:32,866 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-20 23:00:32,870 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a1328e3d106cee4b7b81467e83c1af1721ec1b4f'
2025-03-20 23:00:32,874 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-20 23:00:32,877 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 461 (Update infra) a1328e3d106cee4b7b81467e83c1af1721ec1b4f'
2025-03-20 23:00:32,881 [     scc.git] DEBUG Already up to date.
2025-03-20 23:00:32,883 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-20 23:00:33,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-20 23:00:33,044 [     scc.git] DEBUG Calling 'git submodule update'
2025-03-20 23:00:33,086 [     scc.git] DEBUG Get sha1 of %s
2025-03-20 23:00:33,086 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-20 23:00:33,090 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-20 23:00:33,131 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-03-20 23:00:33,142 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f69e1cebf10> has no local changes
2025-03-20 23:00:33,142 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-insight
Excluded PRs:
  - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
  - PR 377 sukunis 'Fix ontology loads' (exclude comment)
  - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
Already up to date.

Merged PRs:
  - PR 461 jburel 'Update infra'

Generated by OMERO-insight-push#340 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-insight-push/340/)'
2025-03-20 23:00:33,155 [     scc.git] DEBUG [detached HEAD b29d32d45] merge master -Dorg -Ssuccess-only
2025-03-20 23:00:33,156 [   scc.merge] INFO  Repository: ome/omero-insight
2025-03-20 23:00:33,156 [   scc.merge] INFO  Excluded PRs:
2025-03-20 23:00:33,156 [   scc.merge] INFO    - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
2025-03-20 23:00:33,156 [   scc.merge] INFO    - PR 377 sukunis 'Fix ontology loads' (exclude comment)
2025-03-20 23:00:33,156 [   scc.merge] INFO    - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
2025-03-20 23:00:33,156 [   scc.merge] INFO  Already up to date.
2025-03-20 23:00:33,156 [   scc.merge] INFO  
2025-03-20 23:00:33,156 [   scc.merge] INFO  Merged PRs:
2025-03-20 23:00:33,156 [   scc.merge] INFO    - PR 461 jburel 'Update infra'
2025-03-20 23:00:33,156 [   scc.merge] INFO  
2025-03-20 23:00:33,156 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-03-20 23:00:33,156 [     scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.9.3 to 5.10.2-SNAPSHOT
Commit all component version changes
[detached HEAD d0b085a30] Update component versions
 1 file changed, 1 insertion(+), 1 deletion(-)
2025-03-20 23:00:39,329 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-insight/tree/merge_ci
[Pipeline] archiveArtifacts (hide)
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS