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+ export BASE_REPO=omero-matlab.git
+ BASE_REPO=omero-matlab.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-matlab-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-matlab-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-10-23 01:01:58,687 [  scc.config] DEBUG Found github.token
2025-10-23 01:01:58,688 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-10-23 01:01:58,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-23 01:01:59,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-23 01:01:59,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-10-23 01:01:59,716 [      scc.gh] DEBUG 4212 remaining from 5000 (Reset at 01:10
2025-10-23 01:01:59,716 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-23 01:01:59,719 [     scc.git] DEBUG Check current status
2025-10-23 01:01:59,719 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-23 01:01:59,721 [     scc.git] DEBUG 7d4ddff change date
2025-10-23 01:01:59,721 [     scc.git] DEBUG Calling 'git submodule status'
2025-10-23 01:01:59,758 [  scc.config] DEBUG Found remote.origin.url
2025-10-23 01:02:00,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-10-23 01:02:00,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-23 01:02:01,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-23 01:02:01,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-23 01:02:02,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-23 01:02:02,072 [     scc.git] DEBUG Resetting...
2025-10-23 01:02:02,072 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-10-23 01:02:02,076 [     scc.git] DEBUG HEAD is now at 7d4ddff change date
2025-10-23 01:02:02,076 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-10-23 01:02:02,111 [     scc.git] DEBUG Check current status
2025-10-23 01:02:02,111 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-23 01:02:02,113 [     scc.git] DEBUG 7d4ddff change date
2025-10-23 01:02:02,113 [     scc.git] DEBUG Calling 'git submodule status'
2025-10-23 01:02:02,146 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-10-23 01:02:02,147 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-10-23 01:02:02,147 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-10-23 01:02:02,147 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-10-23 01:02:02,147 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-10-23 01:02:02,147 [    scc.repo] DEBUG ## PRs found:
2025-10-23 01:02:02,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-10-23 01:02:03,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-10-23 01:02:03,168 [    scc.repo] DEBUG   - PR 38 jburel 'Update dependency'
2025-10-23 01:02:03,168 [    scc.repo] DEBUG ## Branches found:
2025-10-23 01:02:03,168 [     scc.git] DEBUG Get sha1 of %s
2025-10-23 01:02:03,168 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-23 01:02:03,170 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-23 01:02:03,172 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-23 01:02:03,172 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-23 01:02:03,175 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-23 01:02:03,177 [     scc.git] DEBUG Already up to date.

2025-10-23 01:02:03,177 [     scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-10-23 01:02:03,467 [     scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-10-23 01:02:03,467 [     scc.git] DEBUG  * branch            refs/pull/38/head -> FETCH_HEAD
2025-10-23 01:02:03,471 [     scc.git] DEBUG ## Unique users: []
2025-10-23 01:02:03,471 [     scc.git] DEBUG Get sha1 of %s
2025-10-23 01:02:03,471 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-23 01:02:03,473 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-10-23 01:02:03,475 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-23 01:02:03,477 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-10-23 01:02:03,484 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-23 01:02:03,486 [     scc.git] DEBUG  .github/workflows/gradle.yml | 19 ++++++++++++-------
2025-10-23 01:02:03,486 [     scc.git] DEBUG  build.gradle                 |  4 ++--
2025-10-23 01:02:03,486 [     scc.git] DEBUG  2 files changed, 14 insertions(+), 9 deletions(-)
2025-10-23 01:02:03,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-23 01:02:03,636 [     scc.git] DEBUG Calling 'git submodule update'
2025-10-23 01:02:03,670 [     scc.git] DEBUG Get sha1 of %s
2025-10-23 01:02:03,670 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-23 01:02:03,672 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-10-23 01:02:03,676 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fec63ba0e10> has no local changes
2025-10-23 01:02:03,676 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-matlab
Already up to date.

Merged PRs:
  - PR 38 jburel 'Update dependency'

Generated by OMERO-matlab-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/512/)'
2025-10-23 01:02:03,831 [     scc.git] DEBUG [detached HEAD 3f7ef6e] merge master -Dorg -Snone
2025-10-23 01:02:03,831 [   scc.merge] INFO  Repository: ome/omero-matlab
2025-10-23 01:02:03,831 [   scc.merge] INFO  Already up to date.
2025-10-23 01:02:03,832 [   scc.merge] INFO  
2025-10-23 01:02:03,832 [   scc.merge] INFO  Merged PRs:
2025-10-23 01:02:03,832 [   scc.merge] INFO    - PR 38 jburel 'Update dependency'
2025-10-23 01:02:03,832 [   scc.merge] INFO  
2025-10-23 01:02:03,832 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-10-23 01:02:03,832 [     scc.git] DEBUG Calling 'git remote'
Merge all submodules2025-10-23 01:02:04,247 [  scc.config] DEBUG Found github.token
2025-10-23 01:02:04,249 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-10-23 01:02:04,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-23 01:02:04,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-23 01:02:05,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-10-23 01:02:05,223 [      scc.gh] DEBUG 4202 remaining from 5000 (Reset at 01:10
2025-10-23 01:02:05,224 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-23 01:02:05,226 [     scc.git] DEBUG Check current status
2025-10-23 01:02:05,226 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-23 01:02:05,228 [     scc.git] DEBUG 3f7ef6e merge master -Dorg -Snone
2025-10-23 01:02:05,229 [     scc.git] DEBUG Calling 'git submodule status'
2025-10-23 01:02:05,266 [  scc.config] DEBUG Found remote.origin.url
2025-10-23 01:02:05,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-10-23 01:02:06,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-23 01:02:06,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-23 01:02:07,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-23 01:02:07,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-23 01:02:07,547 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-23 01:02:07,583 [     scc.git] DEBUG Resetting...
2025-10-23 01:02:07,583 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-10-23 01:02:07,587 [     scc.git] DEBUG HEAD is now at 3f7ef6e merge master -Dorg -Snone
2025-10-23 01:02:07,587 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-10-23 01:02:07,622 [     scc.git] DEBUG Check current status
2025-10-23 01:02:07,622 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-23 01:02:07,624 [     scc.git] DEBUG 3f7ef6e merge master -Dorg -Snone
2025-10-23 01:02:07,624 [     scc.git] DEBUG Calling 'git submodule status'
2025-10-23 01:02:07,658 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-10-23 01:02:07,658 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-10-23 01:02:07,658 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-10-23 01:02:07,658 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-10-23 01:02:07,658 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-10-23 01:02:07,658 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2025-10-23 01:02:07,658 [    scc.repo] DEBUG ## PRs found:
2025-10-23 01:02:08,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-10-23 01:02:08,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-10-23 01:02:09,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-10-23 01:02:09,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-23 01:02:10,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-23 01:02:10,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-10-23 01:02:11,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/statuses/a8d38c69bde53075007fff870c8bb5f671b87737?per_page=1 HTTP/1.1" 200 2
2025-10-23 01:02:11,089 [    scc.repo] DEBUG   - PR 38 jburel 'Update dependency'
2025-10-23 01:02:11,089 [    scc.repo] DEBUG ## Branches found:
2025-10-23 01:02:11,089 [     scc.git] DEBUG Get sha1 of %s
2025-10-23 01:02:11,089 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-23 01:02:11,091 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-23 01:02:11,093 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-23 01:02:11,093 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-23 01:02:11,096 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-23 01:02:11,098 [     scc.git] DEBUG Already up to date.

2025-10-23 01:02:11,098 [     scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-10-23 01:02:11,391 [     scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-10-23 01:02:11,391 [     scc.git] DEBUG  * branch            refs/pull/38/head -> FETCH_HEAD
2025-10-23 01:02:11,394 [     scc.git] DEBUG ## Unique users: []
2025-10-23 01:02:11,394 [     scc.git] DEBUG Get sha1 of %s
2025-10-23 01:02:11,394 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-23 01:02:11,396 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-10-23 01:02:11,399 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-23 01:02:11,401 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-10-23 01:02:11,403 [     scc.git] DEBUG Already up to date.
2025-10-23 01:02:11,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-23 01:02:11,546 [     scc.git] DEBUG Calling 'git submodule update'
2025-10-23 01:02:11,581 [     scc.git] DEBUG Get sha1 of %s
2025-10-23 01:02:11,581 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-23 01:02:11,583 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-23 01:02:11,616 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-10-23 01:02:11,619 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f27968746d0> has no local changes
2025-10-23 01:02:11,619 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-matlab
Already up to date.

Merged PRs:
  - PR 38 jburel 'Update dependency'

Generated by OMERO-matlab-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/512/)'
2025-10-23 01:02:11,625 [     scc.git] DEBUG [detached HEAD 8eb4b38] merge master -Dorg -Ssuccess-only
2025-10-23 01:02:11,625 [   scc.merge] INFO  Repository: ome/omero-matlab
2025-10-23 01:02:11,625 [   scc.merge] INFO  Already up to date.
2025-10-23 01:02:11,625 [   scc.merge] INFO  
2025-10-23 01:02:11,625 [   scc.merge] INFO  Merged PRs:
2025-10-23 01:02:11,625 [   scc.merge] INFO    - PR 38 jburel 'Update dependency'
2025-10-23 01:02:11,625 [   scc.merge] INFO  
2025-10-23 01:02:11,625 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-10-23 01:02:11,625 [     scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.10.1 to 5.10.4-SNAPSHOT
Commit all component version changes
[detached HEAD de2c784] Update component versions
 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-23 01:02:18,471 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-matlab/tree/merge_ci