![[Jenkins]](/jenkins/static/695419c3/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 331 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 291 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.3.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.3.1 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.5.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.8-py3-none-any.whl.metadata (22 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.15-py2.py3-none-any.whl.metadata (5.5 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.12.14-py3-none-any.whl.metadata (2.3 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.5.0-py3-none-any.whl (375 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.8-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.15-py2.py3-none-any.whl (9.9 kB) Using cached certifi-2024.12.14-py3-none-any.whl (164 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (146 kB) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_28_x86_64.whl (4.2 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (82 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.15 PyGithub-2.5.0 PyYAML-6.0.2 certifi-2024.12.14 cffi-1.17.1 charset-normalizer-3.4.1 cryptography-44.0.0 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.8 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.17.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-01-05 00:39:59,759 [ scc.config] DEBUG Found github.token 2025-01-05 00:39:59,762 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-01-05 00:39:59,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:40:00,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:40:00,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-01-05 00:40:00,710 [ scc.gh] DEBUG 4998 remaining from 5000 (Reset at 01:01 2025-01-05 00:40:00,710 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-05 00:40:00,714 [ scc.git] DEBUG Check current status 2025-01-05 00:40:00,714 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:40:00,718 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-01-05 00:40:00,718 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:40:00,762 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-01-05 00:40:00,790 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-01-05 00:40:00,974 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-01-05 00:40:00,977 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-01-05 00:40:00,981 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-01-05 00:40:01,024 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-01-05 00:40:01,028 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-01-05 00:40:01,031 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-01-05 00:40:01,034 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-01-05 00:40:01,037 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-01-05 00:40:01,041 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-01-05 00:40:01,068 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-01-05 00:40:01,149 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-01-05 00:40:01,159 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-01-05 00:40:01,163 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-01-05 00:40:01,166 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-01-05 00:40:01,170 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-01-05 00:40:01,208 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-01-05 00:40:01,211 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-01-05 00:40:01,214 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-01-05 00:40:01,217 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-01-05 00:40:01,220 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-01-05 00:40:01,225 [ scc.config] DEBUG Found remote.origin.url 2025-01-05 00:40:01,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-01-05 00:40:01,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-05 00:40:02,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-05 00:40:02,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-05 00:40:03,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-05 00:40:03,199 [ scc.git] DEBUG Resetting... 2025-01-05 00:40:03,200 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-01-05 00:40:03,209 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-01-05 00:40:03,209 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-01-05 00:40:03,309 [ scc.git] DEBUG Check current status 2025-01-05 00:40:03,309 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:40:03,313 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-01-05 00:40:03,313 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:40:03,358 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-01-05 00:40:03,360 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-01-05 00:40:03,363 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-01-05 00:40:03,366 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-01-05 00:40:03,370 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-01-05 00:40:03,372 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-01-05 00:40:03,375 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-01-05 00:40:03,379 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-01-05 00:40:03,382 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-01-05 00:40:03,384 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-01-05 00:40:03,387 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-01-05 00:40:03,390 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-01-05 00:40:03,393 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-01-05 00:40:03,396 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-01-05 00:40:03,400 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-01-05 00:40:03,402 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-01-05 00:40:03,405 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-01-05 00:40:03,408 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-01-05 00:40:03,410 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-01-05 00:40:03,413 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-01-05 00:40:03,416 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-01-05 00:40:03,419 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-01-05 00:40:03,420 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-01-05 00:40:03,420 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-01-05 00:40:03,420 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-01-05 00:40:03,420 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-01-05 00:40:03,420 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-01-05 00:40:03,421 [ scc.repo] DEBUG ## PRs found: 2025-01-05 00:40:03,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-01-05 00:40:04,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-01-05 00:40:04,156 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-05 00:40:04,156 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-01-05 00:40:04,156 [ scc.repo] DEBUG ## Branches found: 2025-01-05 00:40:04,156 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:40:04,156 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:40:04,161 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-05 00:40:04,164 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-05 00:40:04,164 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-05 00:40:04,168 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-05 00:40:04,171 [ scc.git] DEBUG Already up to date. 2025-01-05 00:40:04,172 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-01-05 00:40:04,502 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-01-05 00:40:04,502 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-01-05 00:40:04,508 [ scc.git] DEBUG ## Unique users: [] 2025-01-05 00:40:04,508 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:40:04,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:40:04,513 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-01-05 00:40:04,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:40:04,537 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-01-05 00:40:04,554 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-05 00:40:04,557 [ scc.git] DEBUG scripts | 2 +- 2025-01-05 00:40:04,557 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-01-05 00:40:04,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:40:04,701 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-05 00:40:04,770 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-01-05 00:40:04,771 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:40:04,772 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:40:04,776 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-05 00:40:05,505 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3cffb18340> has no local changes 2025-01-05 00:40:05,506 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' Generated by OMERO-plugins-push#297 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/)' 2025-01-05 00:40:05,582 [ scc.git] DEBUG [detached HEAD fe1c6cb] merge master -Dorg -Snone 2025-01-05 00:40:05,583 [ scc.merge] INFO Repository: ome/omero-plugins 2025-01-05 00:40:05,583 [ scc.merge] INFO Already up to date. 2025-01-05 00:40:05,583 [ scc.merge] INFO 2025-01-05 00:40:05,583 [ scc.merge] INFO Merged PRs: 2025-01-05 00:40:05,583 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-01-05 00:40:05,583 [ scc.merge] INFO 2025-01-05 00:40:05,583 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-01-05 00:40:05,583 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2025-01-05 00:40:15,149 [ scc.config] DEBUG Found github.token 2025-01-05 00:40:15,152 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-01-05 00:40:15,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:40:15,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:40:16,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-01-05 00:40:16,116 [ scc.gh] DEBUG 4988 remaining from 5000 (Reset at 01:01 2025-01-05 00:40:16,117 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-05 00:40:16,121 [ scc.git] DEBUG Check current status 2025-01-05 00:40:16,121 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:40:16,125 [ scc.git] DEBUG fe1c6cb merge master -Dorg -Snone 2025-01-05 00:40:16,125 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:40:16,171 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-01-05 00:40:16,173 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-01-05 00:40:16,177 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-01-05 00:40:16,180 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-01-05 00:40:16,183 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-01-05 00:40:16,186 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-01-05 00:40:16,189 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-01-05 00:40:16,192 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-01-05 00:40:16,195 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-01-05 00:40:16,198 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-01-05 00:40:16,201 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-01-05 00:40:16,204 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-01-05 00:40:16,208 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-01-05 00:40:16,210 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-01-05 00:40:16,214 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-01-05 00:40:16,216 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-01-05 00:40:16,219 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-01-05 00:40:16,221 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-01-05 00:40:16,224 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-01-05 00:40:16,227 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-01-05 00:40:16,230 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-01-05 00:40:16,233 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2025-01-05 00:40:16,237 [ scc.config] DEBUG Found remote.origin.url 2025-01-05 00:40:16,238 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-01-05 00:40:16,240 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2025-01-05 00:40:16,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-01-05 00:40:17,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-05 00:40:17,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-05 00:40:18,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-05 00:40:18,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-05 00:40:18,436 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:40:18,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-01-05 00:40:18,512 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-05 00:40:18,516 [ scc.git] DEBUG Check current status 2025-01-05 00:40:18,517 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:40:18,520 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2025-01-05 00:40:18,520 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:40:18,561 [ scc.config] DEBUG Found remote.origin.url 2025-01-05 00:40:18,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2025-01-05 00:40:19,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-05 00:40:19,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-05 00:40:20,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-05 00:40:20,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-05 00:40:20,598 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:40:20,637 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:40:20,638 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-01-05 00:40:20,638 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-05 00:40:20,642 [ scc.git] DEBUG Check current status 2025-01-05 00:40:20,642 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:40:20,646 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2025-01-05 00:40:20,646 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:40:20,692 [ scc.config] DEBUG Found remote.origin.url 2025-01-05 00:40:21,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2025-01-05 00:40:21,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-05 00:40:21,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-05 00:40:22,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-05 00:40:22,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-05 00:40:22,779 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:40:22,821 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:40:22,822 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-01-05 00:40:22,822 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-05 00:40:22,826 [ scc.git] DEBUG Check current status 2025-01-05 00:40:22,826 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:40:22,830 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export 2025-01-05 00:40:22,830 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:40:22,872 [ scc.config] DEBUG Found remote.origin.url 2025-01-05 00:40:23,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2025-01-05 00:40:23,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-05 00:40:24,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-05 00:40:24,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-05 00:40:24,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-05 00:40:24,963 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:40:25,004 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:40:25,006 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-01-05 00:40:25,006 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-05 00:40:25,010 [ scc.git] DEBUG Check current status 2025-01-05 00:40:25,010 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:40:25,014 [ scc.git] DEBUG 11d3587 Merge pull request #165 from jburel/build 2025-01-05 00:40:25,014 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:40:25,059 [ scc.config] DEBUG Found remote.origin.url 2025-01-05 00:40:25,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2025-01-05 00:40:25,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-05 00:40:26,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-05 00:40:26,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-05 00:40:27,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-05 00:40:27,051 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:40:27,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:40:27,093 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-01-05 00:40:27,093 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-05 00:40:27,098 [ scc.git] DEBUG Check current status 2025-01-05 00:40:27,098 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:40:27,160 [ scc.git] DEBUG fb316a7e Bump version: 7.2.0 → 7.2.1.dev0 2025-01-05 00:40:27,160 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:40:27,207 [ scc.config] DEBUG Found remote.origin.url 2025-01-05 00:40:27,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2025-01-05 00:40:27,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-05 00:40:28,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-05 00:40:28,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-05 00:40:29,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-05 00:40:29,167 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:40:29,210 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:40:29,211 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-01-05 00:40:29,211 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-05 00:40:29,216 [ scc.git] DEBUG Check current status 2025-01-05 00:40:29,216 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:40:29,220 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2025-01-05 00:40:29,220 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:40:29,265 [ scc.config] DEBUG Found remote.origin.url 2025-01-05 00:40:29,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2025-01-05 00:40:30,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-05 00:40:30,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-05 00:40:30,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-05 00:40:31,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-05 00:40:31,317 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:40:31,358 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:40:31,359 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-01-05 00:40:31,359 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-05 00:40:31,364 [ scc.git] DEBUG Check current status 2025-01-05 00:40:31,364 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:40:31,368 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2025-01-05 00:40:31,368 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:40:31,417 [ scc.config] DEBUG Found remote.origin.url 2025-01-05 00:40:31,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2025-01-05 00:40:32,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-05 00:40:32,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-05 00:40:33,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-05 00:40:33,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-05 00:40:33,455 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:40:33,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:40:33,499 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-01-05 00:40:33,499 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-05 00:40:33,503 [ scc.git] DEBUG Check current status 2025-01-05 00:40:33,503 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:40:33,508 [ scc.git] DEBUG b4102d4 add dev 2025-01-05 00:40:33,508 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:40:33,552 [ scc.config] DEBUG Found remote.origin.url 2025-01-05 00:40:33,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2025-01-05 00:40:34,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-05 00:40:34,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-05 00:40:35,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-05 00:40:35,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-05 00:40:35,567 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:40:35,610 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:40:35,611 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-01-05 00:40:35,611 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-05 00:40:35,616 [ scc.git] DEBUG Check current status 2025-01-05 00:40:35,616 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:40:35,621 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2025-01-05 00:40:35,621 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:40:35,668 [ scc.config] DEBUG Found remote.origin.url 2025-01-05 00:40:36,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2025-01-05 00:40:36,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-05 00:40:36,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-05 00:40:37,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-05 00:40:37,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-05 00:40:37,698 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:40:37,739 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:40:37,740 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-01-05 00:40:37,740 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-05 00:40:37,745 [ scc.git] DEBUG Check current status 2025-01-05 00:40:37,745 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:40:37,750 [ scc.git] DEBUG 3cd120c Merge pull request #89 from jburel/build 2025-01-05 00:40:37,750 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:40:37,806 [ scc.config] DEBUG Found remote.origin.url 2025-01-05 00:40:38,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2025-01-05 00:40:38,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-05 00:40:39,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-05 00:40:39,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-05 00:40:39,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-05 00:40:39,878 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:40:39,925 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:40:39,926 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-01-05 00:40:39,926 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-05 00:40:39,931 [ scc.git] DEBUG Check current status 2025-01-05 00:40:39,932 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:40:39,937 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2025-01-05 00:40:39,937 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:40:39,980 [ scc.config] DEBUG Found remote.origin.url 2025-01-05 00:40:40,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2025-01-05 00:40:40,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-05 00:40:41,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-05 00:40:41,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-05 00:40:42,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-05 00:40:42,066 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:40:42,113 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:40:42,115 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-01-05 00:40:42,115 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-05 00:40:42,121 [ scc.git] DEBUG Check current status 2025-01-05 00:40:42,122 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:40:42,126 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2025-01-05 00:40:42,126 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:40:42,167 [ scc.config] DEBUG Found remote.origin.url 2025-01-05 00:40:42,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2025-01-05 00:40:42,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-05 00:40:43,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-05 00:40:43,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-05 00:40:44,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-05 00:40:44,206 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:40:44,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:40:44,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-01-05 00:40:44,249 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-05 00:40:44,253 [ scc.git] DEBUG Check current status 2025-01-05 00:40:44,253 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:40:44,257 [ scc.git] DEBUG bdfeb5e bump sphinx version 2025-01-05 00:40:44,258 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:40:44,302 [ scc.config] DEBUG Found remote.origin.url 2025-01-05 00:40:44,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2025-01-05 00:40:45,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-05 00:40:45,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-05 00:40:45,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-05 00:40:46,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-05 00:40:46,340 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:40:46,383 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:40:46,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-01-05 00:40:46,384 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-05 00:40:46,389 [ scc.git] DEBUG Check current status 2025-01-05 00:40:46,390 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:40:46,394 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2025-01-05 00:40:46,394 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:40:46,441 [ scc.config] DEBUG Found remote.origin.url 2025-01-05 00:40:46,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2025-01-05 00:40:47,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-05 00:40:47,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-05 00:40:48,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-05 00:40:48,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-05 00:40:48,496 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:40:48,542 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:40:48,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-01-05 00:40:48,543 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-05 00:40:48,548 [ scc.git] DEBUG Check current status 2025-01-05 00:40:48,549 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:40:48,553 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2025-01-05 00:40:48,553 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:40:48,599 [ scc.config] DEBUG Found remote.origin.url 2025-01-05 00:40:48,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-01-05 00:40:48,902 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-01-05 00:40:49,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2025-01-05 00:40:49,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-05 00:40:50,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-05 00:40:50,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-05 00:40:50,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-05 00:40:50,821 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:40:50,862 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:40:50,863 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-01-05 00:40:50,863 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-05 00:40:50,868 [ scc.git] DEBUG Check current status 2025-01-05 00:40:50,868 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:40:50,874 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2025-01-05 00:40:50,874 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:40:50,919 [ scc.config] DEBUG Found remote.origin.url 2025-01-05 00:40:51,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2025-01-05 00:40:51,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-05 00:40:52,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-05 00:40:52,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-05 00:40:52,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-05 00:40:52,989 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:40:53,035 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:40:53,036 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-01-05 00:40:53,036 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-05 00:40:53,044 [ scc.git] DEBUG Check current status 2025-01-05 00:40:53,044 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:40:53,051 [ scc.git] DEBUG deab817 update setup-python to v4 2025-01-05 00:40:53,051 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:40:53,101 [ scc.config] DEBUG Found remote.origin.url 2025-01-05 00:40:53,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2025-01-05 00:40:53,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-05 00:40:54,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-05 00:40:54,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-05 00:40:55,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-05 00:40:55,094 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:40:55,138 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:40:55,139 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-01-05 00:40:55,139 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-05 00:40:55,144 [ scc.git] DEBUG Check current status 2025-01-05 00:40:55,144 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:40:55,148 [ scc.git] DEBUG 8f3c313 Merge pull request #17 from jburel/build 2025-01-05 00:40:55,149 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:40:55,194 [ scc.config] DEBUG Found remote.origin.url 2025-01-05 00:40:55,195 [ scc.git] DEBUG Repository configuration: base-branch: main 2025-01-05 00:40:55,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2025-01-05 00:40:55,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-05 00:40:56,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-05 00:40:56,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-05 00:40:57,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-05 00:40:57,172 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:40:57,210 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:40:57,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-01-05 00:40:57,212 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-05 00:40:57,217 [ scc.git] DEBUG Check current status 2025-01-05 00:40:57,217 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:40:57,222 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2025-01-05 00:40:57,222 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:40:57,265 [ scc.config] DEBUG Found remote.origin.url 2025-01-05 00:40:57,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-01-05 00:40:57,584 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-01-05 00:40:57,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2025-01-05 00:40:58,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-05 00:40:58,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-05 00:40:59,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-05 00:40:59,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-05 00:40:59,471 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:40:59,513 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:40:59,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-01-05 00:40:59,514 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-05 00:40:59,520 [ scc.git] DEBUG Check current status 2025-01-05 00:40:59,520 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:40:59,525 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2025-01-05 00:40:59,525 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:40:59,573 [ scc.config] DEBUG Found remote.origin.url 2025-01-05 00:40:59,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-01-05 00:40:59,870 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-01-05 00:41:00,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2025-01-05 00:41:00,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-05 00:41:01,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-05 00:41:01,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-05 00:41:01,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-05 00:41:01,836 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:41:01,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:41:01,882 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-01-05 00:41:01,882 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-05 00:41:01,888 [ scc.git] DEBUG Check current status 2025-01-05 00:41:01,888 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:41:01,894 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-01-05 00:41:01,894 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:41:01,944 [ scc.config] DEBUG Found remote.origin.url 2025-01-05 00:41:02,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2025-01-05 00:41:02,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-05 00:41:03,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-05 00:41:03,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-05 00:41:03,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-05 00:41:03,959 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:41:04,004 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:41:04,006 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-01-05 00:41:04,006 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-05 00:41:04,011 [ scc.git] DEBUG Check current status 2025-01-05 00:41:04,011 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:41:04,027 [ scc.git] DEBUG 4b4c755 Bump version: 5.9.0 → 5.9.1.dev0 2025-01-05 00:41:04,027 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:41:04,076 [ scc.config] DEBUG Found remote.origin.url 2025-01-05 00:41:04,077 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-01-05 00:41:04,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-01-05 00:41:04,369 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-01-05 00:41:04,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2025-01-05 00:41:05,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-05 00:41:05,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-05 00:41:05,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-05 00:41:06,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-05 00:41:06,248 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:41:06,288 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:41:06,288 [ scc.git] DEBUG Resetting... 2025-01-05 00:41:06,288 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-01-05 00:41:06,298 [ scc.git] DEBUG HEAD is now at fe1c6cb merge master -Dorg -Snone 2025-01-05 00:41:06,299 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-01-05 00:41:06,394 [ scc.git] DEBUG Check current status 2025-01-05 00:41:06,395 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-05 00:41:06,400 [ scc.git] DEBUG fe1c6cb merge master -Dorg -Snone 2025-01-05 00:41:06,400 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-05 00:41:06,446 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-01-05 00:41:06,448 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-01-05 00:41:06,452 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-01-05 00:41:06,455 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-01-05 00:41:06,458 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-01-05 00:41:06,461 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-01-05 00:41:06,464 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-01-05 00:41:06,468 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-01-05 00:41:06,471 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-01-05 00:41:06,475 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-01-05 00:41:06,478 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-01-05 00:41:06,481 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-01-05 00:41:06,484 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-01-05 00:41:06,488 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-01-05 00:41:06,491 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-01-05 00:41:06,494 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-01-05 00:41:06,497 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-01-05 00:41:06,499 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-01-05 00:41:06,502 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-01-05 00:41:06,505 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-01-05 00:41:06,508 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-01-05 00:41:06,512 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2025-01-05 00:41:06,513 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-01-05 00:41:06,513 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-01-05 00:41:06,513 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-01-05 00:41:06,513 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-01-05 00:41:06,513 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-01-05 00:41:06,513 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-01-05 00:41:06,514 [ scc.repo] DEBUG ## PRs found: 2025-01-05 00:41:06,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-01-05 00:41:07,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-01-05 00:41:07,217 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-05 00:41:07,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-01-05 00:41:08,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:41:08,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-01-05 00:41:09,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:41:09,082 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-01-05 00:41:09,082 [ scc.repo] DEBUG ## Branches found: 2025-01-05 00:41:09,082 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:41:09,082 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:09,089 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-05 00:41:09,094 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-05 00:41:09,094 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-05 00:41:09,099 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-05 00:41:09,104 [ scc.git] DEBUG Already up to date. 2025-01-05 00:41:09,104 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-01-05 00:41:09,435 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-01-05 00:41:09,435 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-01-05 00:41:09,442 [ scc.git] DEBUG ## Unique users: [] 2025-01-05 00:41:09,442 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:41:09,442 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:09,448 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-01-05 00:41:09,453 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:09,459 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-01-05 00:41:09,466 [ scc.git] DEBUG Already up to date. 2025-01-05 00:41:09,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:41:09,622 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-05 00:41:09,675 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:41:09,675 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:09,681 [ scc.repo] DEBUG ## PRs found: 2025-01-05 00:41:10,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2025-01-05 00:41:10,033 [ scc.repo] DEBUG ## Branches found: 2025-01-05 00:41:10,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-01-05 00:41:10,033 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:41:10,033 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:10,039 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-05 00:41:10,044 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-05 00:41:10,044 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-05 00:41:10,050 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-05 00:41:10,057 [ scc.git] DEBUG Already up to date. 2025-01-05 00:41:10,057 [ scc.git] DEBUG ## Unique users: [] 2025-01-05 00:41:10,057 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:41:10,057 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:10,063 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-05 00:41:10,108 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:41:10,108 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:10,113 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:41:10,156 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-05 00:41:10,163 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f228dfc5520> has no local changes 2025-01-05 00:41:10,163 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#297 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/)' 2025-01-05 00:41:10,172 [ scc.git] DEBUG [detached HEAD 602effe] merge master -Dorg -Ssuccess-only 2025-01-05 00:41:10,173 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:41:10,173 [ scc.repo] DEBUG ## PRs found: 2025-01-05 00:41:10,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2025-01-05 00:41:10,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2025-01-05 00:41:11,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2025-01-05 00:41:11,472 [ scc.repo] DEBUG ## Branches found: 2025-01-05 00:41:11,472 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-01-05 00:41:11,472 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:41:11,472 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:11,478 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-05 00:41:11,483 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-05 00:41:11,484 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-05 00:41:11,489 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-05 00:41:11,494 [ scc.git] DEBUG Already up to date. 2025-01-05 00:41:11,494 [ scc.git] DEBUG ## Unique users: [] 2025-01-05 00:41:11,494 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:41:11,494 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:11,499 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-05 00:41:11,536 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:41:11,536 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:11,541 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:41:11,577 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-05 00:41:11,583 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f228cee5e20> has no local changes 2025-01-05 00:41:11,583 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Generated by OMERO-plugins-push#297 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/)' 2025-01-05 00:41:11,591 [ scc.git] DEBUG [detached HEAD 7813f44] merge master -Dorg -Ssuccess-only 2025-01-05 00:41:11,591 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:41:11,592 [ scc.repo] DEBUG ## PRs found: 2025-01-05 00:41:11,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2025-01-05 00:41:12,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2025-01-05 00:41:13,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2025-01-05 00:41:13,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-01-05 00:41:13,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:41:14,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-05 00:41:15,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-01-05 00:41:15,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:41:15,433 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2025-01-05 00:41:15,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2025-01-05 00:41:16,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2025-01-05 00:41:16,370 [ scc.repo] DEBUG ## Branches found: 2025-01-05 00:41:16,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-01-05 00:41:16,370 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:41:16,370 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:16,376 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-05 00:41:16,383 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-05 00:41:16,383 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-05 00:41:16,390 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-05 00:41:16,397 [ scc.git] DEBUG Already up to date. 2025-01-05 00:41:16,398 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2025-01-05 00:41:16,785 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-01-05 00:41:16,786 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2025-01-05 00:41:16,790 [ scc.git] DEBUG ## Unique users: [] 2025-01-05 00:41:16,791 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:41:16,791 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:16,796 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a' 2025-01-05 00:41:16,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:16,808 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a' 2025-01-05 00:41:16,829 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-05 00:41:16,832 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++--------------------- 2025-01-05 00:41:16,832 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-) 2025-01-05 00:41:16,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:41:16,970 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-05 00:41:17,009 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:41:17,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:17,015 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:41:17,058 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-05 00:41:17,065 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f228ec81040> has no local changes 2025-01-05 00:41:17,065 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#297 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/)' 2025-01-05 00:41:17,073 [ scc.git] DEBUG [detached HEAD 1d8b4b3] merge master -Dorg -Ssuccess-only 2025-01-05 00:41:17,073 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:41:17,074 [ scc.repo] DEBUG ## PRs found: 2025-01-05 00:41:17,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2025-01-05 00:41:18,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2025-01-05 00:41:18,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2025-01-05 00:41:19,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2025-01-05 00:41:19,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2025-01-05 00:41:20,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:41:20,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-05 00:41:20,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2025-01-05 00:41:21,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2025-01-05 00:41:21,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2025-01-05 00:41:22,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2025-01-05 00:41:22,302 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2025-01-05 00:41:22,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2025-01-05 00:41:23,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2025-01-05 00:41:23,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2025-01-05 00:41:24,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2025-01-05 00:41:24,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:41:25,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2025-01-05 00:41:25,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:41:25,628 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2025-01-05 00:41:26,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2025-01-05 00:41:26,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2025-01-05 00:41:27,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2025-01-05 00:41:27,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:41:28,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2025-01-05 00:41:28,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:41:28,455 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2025-01-05 00:41:28,455 [ scc.repo] DEBUG ## Branches found: 2025-01-05 00:41:28,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-01-05 00:41:28,456 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:41:28,456 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:28,463 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-05 00:41:28,468 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-05 00:41:28,468 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-05 00:41:28,474 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-05 00:41:28,479 [ scc.git] DEBUG Already up to date. 2025-01-05 00:41:28,480 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2025-01-05 00:41:28,800 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-01-05 00:41:28,800 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2025-01-05 00:41:28,805 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2025-01-05 00:41:29,185 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-01-05 00:41:29,186 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2025-01-05 00:41:29,191 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2025-01-05 00:41:29,566 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-01-05 00:41:29,566 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2025-01-05 00:41:29,571 [ scc.git] DEBUG ## Unique users: [] 2025-01-05 00:41:29,571 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:41:29,571 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:29,577 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2025-01-05 00:41:29,585 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:29,591 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2025-01-05 00:41:29,667 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2025-01-05 00:41:29,668 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2025-01-05 00:41:29,668 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2025-01-05 00:41:29,668 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-05 00:41:29,668 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-05 00:41:29,674 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2025-01-05 00:41:29,681 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2025-01-05 00:41:29,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:41:29,829 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2025-01-05 00:41:29,838 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..11d35873542022d9638ede115d0dfab4652f8e62' 2025-01-05 00:41:29,844 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#297](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2025-01-05 00:41:29,849 [ scc.config] DEBUG Found github.token 2025-01-05 00:41:29,850 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2025-01-05 00:41:29,850 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2025-01-05 00:41:29,856 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:29,862 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2025-01-05 00:41:29,926 [ scc.git] DEBUG Auto-merging .isort.cfg 2025-01-05 00:41:29,926 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2025-01-05 00:41:29,926 [ scc.git] DEBUG Auto-merging setup.py 2025-01-05 00:41:29,926 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2025-01-05 00:41:29,926 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2025-01-05 00:41:29,926 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2025-01-05 00:41:29,926 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2025-01-05 00:41:29,926 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-05 00:41:29,926 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-05 00:41:29,933 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2025-01-05 00:41:29,941 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2025-01-05 00:41:30,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:41:30,212 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 553b35f498764274f8dc882fb54c7e0a30fb6737' 2025-01-05 00:41:30,220 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..11d35873542022d9638ede115d0dfab4652f8e62' 2025-01-05 00:41:30,226 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#297](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2025-01-05 00:41:30,231 [ scc.config] DEBUG Found github.token 2025-01-05 00:41:30,232 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2025-01-05 00:41:30,232 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2025-01-05 00:41:30,242 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:30,252 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2025-01-05 00:41:30,265 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2025-01-05 00:41:30,266 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2025-01-05 00:41:30,266 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-05 00:41:30,269 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2025-01-05 00:41:30,269 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2025-01-05 00:41:30,269 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2025-01-05 00:41:30,269 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2025-01-05 00:41:30,269 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2025-01-05 00:41:30,269 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2025-01-05 00:41:30,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:41:30,607 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-05 00:41:30,652 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:41:30,652 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:30,659 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:41:30,704 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-05 00:41:30,712 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f228cee3c10> has no local changes 2025-01-05 00:41:30,712 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#297 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/)' 2025-01-05 00:41:30,722 [ scc.git] DEBUG [detached HEAD b6d8044] merge master -Dorg -Ssuccess-only 2025-01-05 00:41:30,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:41:30,722 [ scc.repo] DEBUG ## PRs found: 2025-01-05 00:41:31,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2025-01-05 00:41:31,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605 HTTP/1.1" 200 None 2025-01-05 00:41:32,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2025-01-05 00:41:32,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2025-01-05 00:41:32,648 [ scc.repo] DEBUG ## Branches found: 2025-01-05 00:41:32,648 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-01-05 00:41:32,648 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:41:32,648 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:32,655 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-05 00:41:32,660 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-05 00:41:32,660 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-05 00:41:32,666 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-05 00:41:32,671 [ scc.git] DEBUG Already up to date. 2025-01-05 00:41:32,672 [ scc.git] DEBUG ## Unique users: [] 2025-01-05 00:41:32,672 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:41:32,672 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:32,677 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-05 00:41:32,723 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:41:32,724 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:32,729 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:41:32,769 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-05 00:41:32,777 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f228cef50a0> has no local changes 2025-01-05 00:41:32,777 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Generated by OMERO-plugins-push#297 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/)' 2025-01-05 00:41:32,787 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:41:32,787 [ scc.git] DEBUG [detached HEAD fe81e427] merge master -Dorg -Ssuccess-only 2025-01-05 00:41:32,788 [ scc.repo] DEBUG ## PRs found: 2025-01-05 00:41:33,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2025-01-05 00:41:33,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2025-01-05 00:41:34,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2025-01-05 00:41:34,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-01-05 00:41:35,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:41:35,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-01-05 00:41:36,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:41:36,083 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2025-01-05 00:41:36,084 [ scc.repo] DEBUG ## Branches found: 2025-01-05 00:41:36,084 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-01-05 00:41:36,084 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:41:36,084 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:36,092 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-05 00:41:36,097 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-05 00:41:36,097 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-05 00:41:36,103 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-05 00:41:36,111 [ scc.git] DEBUG Already up to date. 2025-01-05 00:41:36,111 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2025-01-05 00:41:36,453 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-01-05 00:41:36,453 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2025-01-05 00:41:36,457 [ scc.git] DEBUG ## Unique users: [] 2025-01-05 00:41:36,458 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:41:36,458 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:36,463 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-01-05 00:41:36,469 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:36,474 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-01-05 00:41:36,518 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2025-01-05 00:41:36,519 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-05 00:41:36,522 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2025-01-05 00:41:36,522 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2025-01-05 00:41:36,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:41:36,669 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-05 00:41:36,710 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:41:36,710 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:36,715 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:41:36,760 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-05 00:41:36,769 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f228dfc59d0> has no local changes 2025-01-05 00:41:36,769 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#297 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/)' 2025-01-05 00:41:36,779 [ scc.git] DEBUG [detached HEAD dddaa67] merge master -Dorg -Ssuccess-only 2025-01-05 00:41:36,779 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:41:36,780 [ scc.repo] DEBUG ## PRs found: 2025-01-05 00:41:37,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2025-01-05 00:41:37,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2025-01-05 00:41:38,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2025-01-05 00:41:38,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2025-01-05 00:41:38,715 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-05 00:41:39,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-01-05 00:41:39,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:41:40,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-05 00:41:40,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-01-05 00:41:41,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:41:41,282 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-01-05 00:41:41,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2025-01-05 00:41:41,725 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-05 00:41:42,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-01-05 00:41:42,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:41:43,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-05 00:41:43,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-01-05 00:41:44,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:41:44,112 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-01-05 00:41:44,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2025-01-05 00:41:44,556 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-05 00:41:45,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-01-05 00:41:45,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:41:46,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-05 00:41:46,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-01-05 00:41:47,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:41:47,115 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-01-05 00:41:47,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2025-01-05 00:41:47,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2025-01-05 00:41:47,995 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-05 00:41:48,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-01-05 00:41:49,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:41:49,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-05 00:41:50,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-01-05 00:41:50,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:41:50,577 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-01-05 00:41:51,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2025-01-05 00:41:51,062 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-05 00:41:51,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-01-05 00:41:52,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:41:52,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-05 00:41:53,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-01-05 00:41:53,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:41:53,438 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-01-05 00:41:53,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2025-01-05 00:41:53,897 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-05 00:41:54,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-01-05 00:41:54,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:41:55,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-05 00:41:55,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-01-05 00:41:56,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:41:56,394 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-01-05 00:41:56,394 [ scc.repo] DEBUG ## Branches found: 2025-01-05 00:41:56,394 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-01-05 00:41:56,395 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:41:56,396 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:56,406 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-05 00:41:56,413 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-05 00:41:56,413 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-05 00:41:56,419 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-05 00:41:56,426 [ scc.git] DEBUG Already up to date. 2025-01-05 00:41:56,426 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2025-01-05 00:41:56,749 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-01-05 00:41:56,749 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2025-01-05 00:41:56,754 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2025-01-05 00:41:57,059 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-01-05 00:41:57,060 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2025-01-05 00:41:57,064 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2025-01-05 00:41:57,394 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-01-05 00:41:57,395 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2025-01-05 00:41:57,400 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2025-01-05 00:41:57,686 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-01-05 00:41:57,687 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2025-01-05 00:41:57,691 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2025-01-05 00:41:57,981 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-01-05 00:41:57,981 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2025-01-05 00:41:57,986 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2025-01-05 00:41:58,281 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-01-05 00:41:58,281 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2025-01-05 00:41:58,287 [ scc.git] DEBUG ## Unique users: [] 2025-01-05 00:41:58,287 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:41:58,287 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:58,294 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-01-05 00:41:58,310 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:58,316 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-01-05 00:41:58,353 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-05 00:41:58,358 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2025-01-05 00:41:58,358 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2025-01-05 00:41:58,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:41:58,503 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-01-05 00:41:58,527 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:58,534 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-01-05 00:41:58,597 [ scc.git] DEBUG Auto-merging package-lock.json 2025-01-05 00:41:58,598 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-05 00:41:58,603 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2025-01-05 00:41:58,603 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2025-01-05 00:41:58,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:41:58,881 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-01-05 00:41:58,901 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:58,907 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-01-05 00:41:58,949 [ scc.git] DEBUG Auto-merging package-lock.json 2025-01-05 00:41:58,949 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-01-05 00:41:58,949 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-05 00:41:58,950 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-05 00:41:58,956 [ scc.git] DEBUG Calling 'git reset --hard 8e9b39e0e2348391e8d20c612bce4d59b5f29253' 2025-01-05 00:41:58,965 [ scc.git] DEBUG HEAD is now at 8e9b39e merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2025-01-05 00:41:59,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:41:59,272 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-01-05 00:41:59,278 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-01-05 00:41:59,285 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#297](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2025-01-05 00:41:59,289 [ scc.config] DEBUG Found github.token 2025-01-05 00:41:59,290 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2025-01-05 00:41:59,290 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-01-05 00:41:59,377 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:59,383 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-01-05 00:41:59,449 [ scc.git] DEBUG Auto-merging package-lock.json 2025-01-05 00:41:59,450 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-05 00:41:59,455 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2025-01-05 00:41:59,455 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2025-01-05 00:41:59,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:41:59,674 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-01-05 00:41:59,698 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:41:59,705 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-01-05 00:41:59,751 [ scc.git] DEBUG Auto-merging package-lock.json 2025-01-05 00:41:59,751 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-05 00:41:59,756 [ scc.git] DEBUG package-lock.json | 6 +++--- 2025-01-05 00:41:59,756 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2025-01-05 00:42:00,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:42:00,065 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-01-05 00:42:00,093 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:00,099 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-01-05 00:42:00,188 [ scc.git] DEBUG Auto-merging package-lock.json 2025-01-05 00:42:00,189 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-01-05 00:42:00,189 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-05 00:42:00,189 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-05 00:42:00,198 [ scc.git] DEBUG Calling 'git reset --hard 145404a1e5900a8a158944332496eb25d1bf49e5' 2025-01-05 00:42:00,210 [ scc.git] DEBUG HEAD is now at 145404a merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-01-05 00:42:00,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:42:00,491 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-01-05 00:42:00,498 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-01-05 00:42:00,506 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#297](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2025-01-05 00:42:00,512 [ scc.config] DEBUG Found github.token 2025-01-05 00:42:00,513 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2025-01-05 00:42:00,513 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-05 00:42:00,558 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:00,559 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:00,565 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:42:00,609 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-05 00:42:00,616 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f228ced7b80> has no local changes 2025-01-05 00:42:00,617 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Generated by OMERO-plugins-push#297 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/)' 2025-01-05 00:42:00,627 [ scc.git] DEBUG [detached HEAD d54c88b] merge master -Dorg -Ssuccess-only 2025-01-05 00:42:00,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:42:00,628 [ scc.repo] DEBUG ## PRs found: 2025-01-05 00:42:00,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2025-01-05 00:42:01,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2025-01-05 00:42:01,495 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-05 00:42:02,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-01-05 00:42:02,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:42:03,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-05 00:42:03,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-01-05 00:42:03,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:42:03,978 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-01-05 00:42:04,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2025-01-05 00:42:04,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2025-01-05 00:42:05,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2025-01-05 00:42:05,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2025-01-05 00:42:06,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-01-05 00:42:06,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:42:07,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-05 00:42:07,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-01-05 00:42:08,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:42:08,197 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2025-01-05 00:42:08,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2025-01-05 00:42:09,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2025-01-05 00:42:09,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-01-05 00:42:10,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:42:10,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-05 00:42:11,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-01-05 00:42:11,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:42:11,724 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2025-01-05 00:42:12,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2025-01-05 00:42:12,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2025-01-05 00:42:13,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-01-05 00:42:13,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:42:14,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-01-05 00:42:14,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:42:14,547 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2025-01-05 00:42:14,548 [ scc.repo] DEBUG ## Branches found: 2025-01-05 00:42:14,548 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-01-05 00:42:14,548 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:14,548 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:14,554 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-05 00:42:14,560 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-05 00:42:14,560 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-05 00:42:14,586 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-05 00:42:14,593 [ scc.git] DEBUG Already up to date. 2025-01-05 00:42:14,593 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2025-01-05 00:42:14,953 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-01-05 00:42:14,953 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2025-01-05 00:42:14,959 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2025-01-05 00:42:15,923 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-01-05 00:42:15,924 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2025-01-05 00:42:15,929 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2025-01-05 00:42:16,279 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-01-05 00:42:16,280 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2025-01-05 00:42:16,285 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2025-01-05 00:42:16,574 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-01-05 00:42:16,575 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2025-01-05 00:42:16,579 [ scc.git] DEBUG ## Unique users: [] 2025-01-05 00:42:16,579 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:16,579 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:16,585 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-01-05 00:42:16,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:16,599 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-01-05 00:42:16,665 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2025-01-05 00:42:16,665 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-05 00:42:16,669 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2025-01-05 00:42:16,669 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2025-01-05 00:42:16,669 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2025-01-05 00:42:16,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:42:16,800 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2025-01-05 00:42:16,809 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:16,816 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2025-01-05 00:42:16,868 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2025-01-05 00:42:16,869 [ scc.git] DEBUG Auto-merging src/app/context.js 2025-01-05 00:42:16,869 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2025-01-05 00:42:16,869 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2025-01-05 00:42:16,869 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-05 00:42:16,874 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2025-01-05 00:42:16,874 [ scc.git] DEBUG src/app/context.js | 6 +- 2025-01-05 00:42:16,874 [ scc.git] DEBUG src/app/header.html | 5 + 2025-01-05 00:42:16,874 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2025-01-05 00:42:16,874 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2025-01-05 00:42:16,874 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2025-01-05 00:42:16,875 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2025-01-05 00:42:16,875 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2025-01-05 00:42:17,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:42:17,190 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2025-01-05 00:42:17,199 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:17,204 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2025-01-05 00:42:17,234 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2025-01-05 00:42:17,235 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-05 00:42:17,238 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2025-01-05 00:42:17,239 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2025-01-05 00:42:17,239 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2025-01-05 00:42:17,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:42:17,577 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-01-05 00:42:17,597 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:17,603 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-01-05 00:42:17,647 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-05 00:42:17,657 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2025-01-05 00:42:17,657 [ scc.git] DEBUG package.json | 2 +- 2025-01-05 00:42:17,657 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2025-01-05 00:42:17,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:42:17,974 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-05 00:42:18,020 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:18,020 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:18,028 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:42:18,077 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-05 00:42:18,088 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f228ce8ef40> has no local changes 2025-01-05 00:42:18,088 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Generated by OMERO-plugins-push#297 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/)' 2025-01-05 00:42:18,098 [ scc.git] DEBUG [detached HEAD ec67a3e] merge master -Dorg -Ssuccess-only 2025-01-05 00:42:18,098 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:42:18,098 [ scc.repo] DEBUG ## PRs found: 2025-01-05 00:42:18,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2025-01-05 00:42:18,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2025-01-05 00:42:19,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2025-01-05 00:42:20,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-01-05 00:42:20,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:42:21,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-01-05 00:42:21,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:42:21,681 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2025-01-05 00:42:21,681 [ scc.repo] DEBUG ## Branches found: 2025-01-05 00:42:21,681 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-01-05 00:42:21,682 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:21,682 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:21,689 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-05 00:42:21,695 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-05 00:42:21,695 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-05 00:42:21,702 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-05 00:42:21,709 [ scc.git] DEBUG Already up to date. 2025-01-05 00:42:21,709 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2025-01-05 00:42:22,198 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-01-05 00:42:22,198 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2025-01-05 00:42:22,204 [ scc.git] DEBUG ## Unique users: [] 2025-01-05 00:42:22,204 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:22,204 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:22,211 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-01-05 00:42:22,219 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:22,226 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-01-05 00:42:22,239 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-05 00:42:22,242 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2025-01-05 00:42:22,242 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2025-01-05 00:42:22,242 [ scc.git] DEBUG requirements.txt | 2 +- 2025-01-05 00:42:22,242 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2025-01-05 00:42:22,242 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2025-01-05 00:42:22,242 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2025-01-05 00:42:22,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:42:22,382 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-05 00:42:22,429 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:22,429 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:22,435 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:42:22,481 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-05 00:42:22,488 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f228c66c520> has no local changes 2025-01-05 00:42:22,488 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#297 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/)' 2025-01-05 00:42:22,499 [ scc.git] DEBUG [detached HEAD 5d64cfc] merge master -Dorg -Ssuccess-only 2025-01-05 00:42:22,500 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:42:22,500 [ scc.repo] DEBUG ## PRs found: 2025-01-05 00:42:22,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2025-01-05 00:42:23,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2025-01-05 00:42:24,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2025-01-05 00:42:24,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-01-05 00:42:24,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:42:25,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-01-05 00:42:25,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:42:25,896 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-01-05 00:42:26,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2025-01-05 00:42:26,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2025-01-05 00:42:27,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-01-05 00:42:27,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:42:28,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-01-05 00:42:28,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:42:28,679 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-01-05 00:42:28,679 [ scc.repo] DEBUG ## Branches found: 2025-01-05 00:42:28,679 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-01-05 00:42:28,679 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:28,679 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:28,686 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-05 00:42:28,692 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-05 00:42:28,693 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-05 00:42:28,699 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-05 00:42:28,706 [ scc.git] DEBUG Already up to date. 2025-01-05 00:42:28,707 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2025-01-05 00:42:29,221 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-01-05 00:42:29,221 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2025-01-05 00:42:29,226 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2025-01-05 00:42:29,710 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-01-05 00:42:29,711 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2025-01-05 00:42:29,716 [ scc.git] DEBUG ## Unique users: [] 2025-01-05 00:42:29,716 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:29,716 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:29,723 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-01-05 00:42:29,731 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:29,736 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-01-05 00:42:29,861 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2025-01-05 00:42:29,861 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2025-01-05 00:42:29,861 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-01-05 00:42:29,861 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-01-05 00:42:29,861 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-05 00:42:29,862 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-05 00:42:29,869 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-01-05 00:42:29,876 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build 2025-01-05 00:42:30,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:42:30,027 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-01-05 00:42:30,036 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-01-05 00:42:30,082 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#297](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2025-01-05 00:42:30,088 [ scc.config] DEBUG Found github.token 2025-01-05 00:42:30,088 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2025-01-05 00:42:30,088 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2025-01-05 00:42:30,097 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:30,102 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2025-01-05 00:42:30,197 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-01-05 00:42:30,197 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-01-05 00:42:30,197 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2025-01-05 00:42:30,197 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-05 00:42:30,198 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-05 00:42:30,205 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-01-05 00:42:30,213 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build 2025-01-05 00:42:30,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:42:30,424 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 78e55539b68e351ed5ef202854718b49a37729a7' 2025-01-05 00:42:30,432 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-01-05 00:42:30,438 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#297](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2025-01-05 00:42:30,443 [ scc.config] DEBUG Found github.token 2025-01-05 00:42:30,443 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2025-01-05 00:42:30,443 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-05 00:42:30,486 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:30,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:30,492 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:42:30,535 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-05 00:42:30,543 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f228c67eb20> has no local changes 2025-01-05 00:42:30,544 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#297 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/)' 2025-01-05 00:42:30,554 [ scc.git] DEBUG [detached HEAD 301f048] merge master -Dorg -Ssuccess-only 2025-01-05 00:42:30,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:42:30,555 [ scc.repo] DEBUG ## PRs found: 2025-01-05 00:42:30,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2025-01-05 00:42:31,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2025-01-05 00:42:31,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2025-01-05 00:42:32,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2025-01-05 00:42:32,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2025-01-05 00:42:33,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2025-01-05 00:42:33,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2025-01-05 00:42:34,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2025-01-05 00:42:34,310 [ scc.repo] DEBUG ## Branches found: 2025-01-05 00:42:34,310 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-01-05 00:42:34,310 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:34,310 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:34,316 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-05 00:42:34,322 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-05 00:42:34,322 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-05 00:42:34,328 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-05 00:42:34,334 [ scc.git] DEBUG Already up to date. 2025-01-05 00:42:34,334 [ scc.git] DEBUG ## Unique users: [] 2025-01-05 00:42:34,334 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:34,334 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:34,340 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-05 00:42:34,389 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:34,389 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:34,396 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:42:34,434 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-05 00:42:34,441 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f228c622880> has no local changes 2025-01-05 00:42:34,442 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Generated by OMERO-plugins-push#297 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/)' 2025-01-05 00:42:34,452 [ scc.git] DEBUG [detached HEAD 13512f8] merge master -Dorg -Ssuccess-only 2025-01-05 00:42:34,452 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:42:34,453 [ scc.repo] DEBUG ## PRs found: 2025-01-05 00:42:34,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 2 2025-01-05 00:42:34,718 [ scc.repo] DEBUG ## Branches found: 2025-01-05 00:42:34,718 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-01-05 00:42:34,718 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:34,719 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:34,724 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-05 00:42:34,729 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-05 00:42:34,729 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-05 00:42:34,736 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-05 00:42:34,742 [ scc.git] DEBUG Already up to date. 2025-01-05 00:42:34,742 [ scc.git] DEBUG ## Unique users: [] 2025-01-05 00:42:34,742 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:34,742 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:34,747 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-05 00:42:34,788 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:34,788 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:34,795 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:42:34,842 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-05 00:42:34,849 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f228c6226a0> has no local changes 2025-01-05 00:42:34,849 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Generated by OMERO-plugins-push#297 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/)' 2025-01-05 00:42:34,860 [ scc.git] DEBUG [detached HEAD 79be286] merge master -Dorg -Ssuccess-only 2025-01-05 00:42:34,860 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:42:34,860 [ scc.repo] DEBUG ## PRs found: 2025-01-05 00:42:35,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2025-01-05 00:42:35,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2025-01-05 00:42:36,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2025-01-05 00:42:36,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2025-01-05 00:42:37,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:42:37,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2025-01-05 00:42:38,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:42:38,031 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2025-01-05 00:42:38,031 [ scc.repo] DEBUG ## Branches found: 2025-01-05 00:42:38,031 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-01-05 00:42:38,031 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:38,031 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:38,037 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-05 00:42:38,042 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-05 00:42:38,043 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-05 00:42:38,049 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-05 00:42:38,056 [ scc.git] DEBUG Already up to date. 2025-01-05 00:42:38,056 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2025-01-05 00:42:38,498 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-01-05 00:42:38,498 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2025-01-05 00:42:38,503 [ scc.git] DEBUG ## Unique users: [] 2025-01-05 00:42:38,503 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:38,503 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:38,509 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2025-01-05 00:42:38,516 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:38,522 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2025-01-05 00:42:38,532 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2025-01-05 00:42:38,533 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-05 00:42:38,536 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2025-01-05 00:42:38,536 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2025-01-05 00:42:38,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:42:38,670 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-05 00:42:38,713 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:38,714 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:38,722 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:42:38,770 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-05 00:42:38,779 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f228c5dc5b0> has no local changes 2025-01-05 00:42:38,780 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#297 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/)' 2025-01-05 00:42:38,791 [ scc.git] DEBUG [detached HEAD 3702a98] merge master -Dorg -Ssuccess-only 2025-01-05 00:42:38,792 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:42:38,792 [ scc.repo] DEBUG ## PRs found: 2025-01-05 00:42:39,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2025-01-05 00:42:39,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2025-01-05 00:42:40,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2025-01-05 00:42:40,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-01-05 00:42:41,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:42:41,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-01-05 00:42:41,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:42:41,964 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2025-01-05 00:42:41,964 [ scc.repo] DEBUG ## Branches found: 2025-01-05 00:42:41,964 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-01-05 00:42:41,964 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:41,965 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:41,970 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-05 00:42:41,976 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-05 00:42:41,976 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-05 00:42:41,982 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-05 00:42:41,988 [ scc.git] DEBUG Already up to date. 2025-01-05 00:42:41,989 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-01-05 00:42:42,379 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-01-05 00:42:42,379 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-01-05 00:42:42,385 [ scc.git] DEBUG ## Unique users: [] 2025-01-05 00:42:42,385 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:42,385 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:42,391 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-01-05 00:42:42,399 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:42,406 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-01-05 00:42:42,514 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2025-01-05 00:42:42,514 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2025-01-05 00:42:42,514 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2025-01-05 00:42:42,514 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2025-01-05 00:42:42,514 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2025-01-05 00:42:42,514 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2025-01-05 00:42:42,514 [ scc.git] DEBUG Auto-merging setup.py 2025-01-05 00:42:42,514 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2025-01-05 00:42:42,514 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-05 00:42:42,515 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-05 00:42:42,522 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2025-01-05 00:42:42,530 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2025-01-05 00:42:42,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:42:42,743 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-01-05 00:42:42,751 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2025-01-05 00:42:42,792 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#297](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - setup.py - omero_signup/signup_settings.py - omero_signup/views.py --conflicts 2025-01-05 00:42:42,797 [ scc.config] DEBUG Found github.token 2025-01-05 00:42:42,798 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2025-01-05 00:42:42,798 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-05 00:42:42,839 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:42,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:42,845 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:42:42,886 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-05 00:42:42,892 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f228c5dc7f0> has no local changes 2025-01-05 00:42:42,893 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#297 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/)' 2025-01-05 00:42:42,903 [ scc.git] DEBUG [detached HEAD 594a642] merge master -Dorg -Ssuccess-only 2025-01-05 00:42:42,904 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:42:42,904 [ scc.repo] DEBUG ## PRs found: 2025-01-05 00:42:43,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2025-01-05 00:42:43,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2025-01-05 00:42:44,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2025-01-05 00:42:44,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2025-01-05 00:42:45,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:42:45,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-05 00:42:46,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None 2025-01-05 00:42:46,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None 2025-01-05 00:42:47,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2025-01-05 00:42:47,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2025-01-05 00:42:48,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-01-05 00:42:48,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:42:48,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-01-05 00:42:49,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:42:49,355 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-01-05 00:42:49,356 [ scc.repo] DEBUG ## Branches found: 2025-01-05 00:42:49,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-01-05 00:42:49,356 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:49,356 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:49,363 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-05 00:42:49,369 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-05 00:42:49,369 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-05 00:42:49,376 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-05 00:42:49,383 [ scc.git] DEBUG Already up to date. 2025-01-05 00:42:49,384 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2025-01-05 00:42:49,775 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-01-05 00:42:49,775 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2025-01-05 00:42:49,780 [ scc.git] DEBUG ## Unique users: [] 2025-01-05 00:42:49,780 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:49,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:49,786 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2025-01-05 00:42:49,795 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:49,801 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2025-01-05 00:42:49,892 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-05 00:42:49,895 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2025-01-05 00:42:49,895 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2025-01-05 00:42:49,895 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2025-01-05 00:42:49,895 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2025-01-05 00:42:49,895 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2025-01-05 00:42:49,897 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2025-01-05 00:42:49,898 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2025-01-05 00:42:49,898 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2025-01-05 00:42:49,898 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2025-01-05 00:42:49,898 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2025-01-05 00:42:49,898 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2025-01-05 00:42:49,898 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2025-01-05 00:42:49,898 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2025-01-05 00:42:49,898 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2025-01-05 00:42:49,898 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2025-01-05 00:42:49,898 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2025-01-05 00:42:49,898 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2025-01-05 00:42:49,898 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2025-01-05 00:42:49,898 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2025-01-05 00:42:49,898 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2025-01-05 00:42:49,898 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2025-01-05 00:42:49,898 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2025-01-05 00:42:49,898 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2025-01-05 00:42:49,898 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2025-01-05 00:42:49,898 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2025-01-05 00:42:49,898 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2025-01-05 00:42:49,898 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2025-01-05 00:42:49,898 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2025-01-05 00:42:49,898 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2025-01-05 00:42:49,898 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2025-01-05 00:42:49,899 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2025-01-05 00:42:49,899 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2025-01-05 00:42:49,899 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2025-01-05 00:42:49,899 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2025-01-05 00:42:49,899 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2025-01-05 00:42:49,899 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2025-01-05 00:42:49,899 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2025-01-05 00:42:49,899 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2025-01-05 00:42:49,899 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2025-01-05 00:42:49,899 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2025-01-05 00:42:49,899 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2025-01-05 00:42:49,899 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2025-01-05 00:42:49,899 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2025-01-05 00:42:49,899 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2025-01-05 00:42:49,899 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2025-01-05 00:42:50,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:42:50,039 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-05 00:42:50,090 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:50,090 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:50,097 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:42:50,137 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-05 00:42:50,144 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f228c5dc610> has no local changes 2025-01-05 00:42:50,145 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#297 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/)' 2025-01-05 00:42:50,153 [ scc.git] DEBUG [detached HEAD 6b2f0d7] merge master -Dorg -Ssuccess-only 2025-01-05 00:42:50,154 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:42:50,154 [ scc.repo] DEBUG ## PRs found: 2025-01-05 00:42:50,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2025-01-05 00:42:50,438 [ scc.repo] DEBUG ## Branches found: 2025-01-05 00:42:50,438 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-01-05 00:42:50,438 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:50,439 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:50,445 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-05 00:42:50,450 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-05 00:42:50,451 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-05 00:42:50,457 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-05 00:42:50,463 [ scc.git] DEBUG Already up to date. 2025-01-05 00:42:50,464 [ scc.git] DEBUG ## Unique users: [] 2025-01-05 00:42:50,464 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:50,464 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:50,469 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-05 00:42:50,510 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:50,510 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:50,515 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:42:50,557 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-05 00:42:50,564 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f228c649490> has no local changes 2025-01-05 00:42:50,565 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#297 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/)' 2025-01-05 00:42:50,574 [ scc.git] DEBUG [detached HEAD 1c91e36] merge master -Dorg -Ssuccess-only 2025-01-05 00:42:50,574 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:42:50,575 [ scc.repo] DEBUG ## PRs found: 2025-01-05 00:42:50,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2025-01-05 00:42:51,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20 HTTP/1.1" 200 None 2025-01-05 00:42:51,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20/comments HTTP/1.1" 200 None 2025-01-05 00:42:52,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None 2025-01-05 00:42:53,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:42:53,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-05 00:42:54,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None 2025-01-05 00:42:54,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/14c890a5b62ef9937c751230251154351debb9ea?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:42:54,608 [ scc.repo] DEBUG - PR 20 jburel 'Build' 2025-01-05 00:42:54,608 [ scc.repo] DEBUG ## Branches found: 2025-01-05 00:42:54,608 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-01-05 00:42:54,608 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:54,608 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:54,615 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-05 00:42:54,620 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-05 00:42:54,620 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-05 00:42:54,625 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-05 00:42:54,631 [ scc.git] DEBUG Already up to date. 2025-01-05 00:42:54,631 [ scc.git] DEBUG Calling 'git fetch origin pull/20/head' 2025-01-05 00:42:55,051 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2025-01-05 00:42:55,052 [ scc.git] DEBUG * branch refs/pull/20/head -> FETCH_HEAD 2025-01-05 00:42:55,057 [ scc.git] DEBUG ## Unique users: [] 2025-01-05 00:42:55,057 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:55,057 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:55,063 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14c890a5b62ef9937c751230251154351debb9ea' 2025-01-05 00:42:55,070 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:55,076 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 20 (Build) 14c890a5b62ef9937c751230251154351debb9ea' 2025-01-05 00:42:55,110 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-05 00:42:55,113 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2025-01-05 00:42:55,113 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2025-01-05 00:42:55,113 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++ 2025-01-05 00:42:55,113 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-) 2025-01-05 00:42:55,113 [ scc.git] DEBUG create mode 100755 .omeroci/app-build 2025-01-05 00:42:55,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:42:55,261 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-05 00:42:55,305 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:42:55,305 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:42:55,311 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:42:55,353 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-05 00:42:55,360 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f228c64ff40> has no local changes 2025-01-05 00:42:55,361 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Merged PRs: - PR 20 jburel 'Build' Generated by OMERO-plugins-push#297 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/)' 2025-01-05 00:42:55,370 [ scc.git] DEBUG [detached HEAD 789dba7] merge master -Dorg -Ssuccess-only 2025-01-05 00:42:55,371 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:42:55,371 [ scc.git] INFO Overriding base-branch from master to main 2025-01-05 00:42:55,371 [ scc.repo] DEBUG ## PRs found: 2025-01-05 00:42:55,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2025-01-05 00:42:56,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None 2025-01-05 00:42:56,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None 2025-01-05 00:42:57,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None 2025-01-05 00:42:57,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:42:58,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-05 00:42:58,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2025-01-05 00:42:59,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2025-01-05 00:42:59,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2025-01-05 00:42:59,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-01-05 00:43:00,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:43:00,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-01-05 00:43:01,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:43:01,299 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-01-05 00:43:01,299 [ scc.repo] DEBUG ## Branches found: 2025-01-05 00:43:01,299 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-01-05 00:43:01,299 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:43:01,299 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:43:01,306 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2025-01-05 00:43:01,311 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-05 00:43:01,311 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2025-01-05 00:43:01,317 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2025-01-05 00:43:01,322 [ scc.git] DEBUG Already up to date. 2025-01-05 00:43:01,323 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2025-01-05 00:43:01,719 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-01-05 00:43:01,719 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2025-01-05 00:43:01,724 [ scc.git] DEBUG ## Unique users: [] 2025-01-05 00:43:01,724 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:43:01,724 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:43:01,731 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-01-05 00:43:01,738 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:43:01,745 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-01-05 00:43:01,802 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2025-01-05 00:43:01,803 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2025-01-05 00:43:01,803 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-05 00:43:01,803 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-05 00:43:01,810 [ scc.git] DEBUG Calling 'git reset --hard 8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2025-01-05 00:43:01,817 [ scc.git] DEBUG HEAD is now at 8f3c313 Merge pull request #17 from jburel/build 2025-01-05 00:43:01,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:01,989 [ scc.git] DEBUG Calling 'git merge-base 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-01-05 00:43:01,995 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2025-01-05 00:43:02,000 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#297](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2025-01-05 00:43:02,006 [ scc.config] DEBUG Found github.token 2025-01-05 00:43:02,007 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2025-01-05 00:43:02,007 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-05 00:43:02,050 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:43:02,050 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:43:02,056 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:43:02,099 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-05 00:43:02,107 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f228c5b44f0> has no local changes 2025-01-05 00:43:02,108 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#297 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/)' 2025-01-05 00:43:02,117 [ scc.git] DEBUG [detached HEAD 9c809c3] merge master -Dorg -Ssuccess-only 2025-01-05 00:43:02,118 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:02,118 [ scc.repo] DEBUG ## PRs found: 2025-01-05 00:43:02,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2025-01-05 00:43:02,408 [ scc.repo] DEBUG ## Branches found: 2025-01-05 00:43:02,408 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-01-05 00:43:02,408 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:43:02,408 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:43:02,414 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-05 00:43:02,418 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-05 00:43:02,419 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-05 00:43:02,424 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-05 00:43:02,429 [ scc.git] DEBUG Already up to date. 2025-01-05 00:43:02,429 [ scc.git] DEBUG ## Unique users: [] 2025-01-05 00:43:02,429 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:43:02,430 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:43:02,434 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-05 00:43:02,473 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:43:02,473 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:43:02,478 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:43:02,517 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-05 00:43:02,523 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f228c649760> has no local changes 2025-01-05 00:43:02,524 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#297 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/)' 2025-01-05 00:43:02,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:02,532 [ scc.git] DEBUG [detached HEAD 76150ae] merge master -Dorg -Ssuccess-only 2025-01-05 00:43:02,532 [ scc.repo] DEBUG ## PRs found: 2025-01-05 00:43:02,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2025-01-05 00:43:02,825 [ scc.repo] DEBUG ## Branches found: 2025-01-05 00:43:02,825 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-01-05 00:43:02,825 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:43:02,825 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:43:02,831 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-05 00:43:02,837 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-05 00:43:02,837 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-05 00:43:02,843 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-05 00:43:02,849 [ scc.git] DEBUG Already up to date. 2025-01-05 00:43:02,849 [ scc.git] DEBUG ## Unique users: [] 2025-01-05 00:43:02,849 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:43:02,849 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:43:02,855 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-05 00:43:02,899 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:43:02,899 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:43:02,905 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:43:02,948 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-05 00:43:02,956 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f228c5c5bb0> has no local changes 2025-01-05 00:43:02,956 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#297 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/)' 2025-01-05 00:43:02,966 [ scc.git] DEBUG [detached HEAD 9d9344b] merge master -Dorg -Ssuccess-only 2025-01-05 00:43:02,966 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:02,966 [ scc.repo] DEBUG ## PRs found: 2025-01-05 00:43:03,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2025-01-05 00:43:03,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2025-01-05 00:43:04,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2025-01-05 00:43:04,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-01-05 00:43:05,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:43:05,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-01-05 00:43:06,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:43:06,222 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2025-01-05 00:43:06,223 [ scc.repo] DEBUG ## Branches found: 2025-01-05 00:43:06,223 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-01-05 00:43:06,223 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:43:06,223 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:43:06,229 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-05 00:43:06,235 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-05 00:43:06,236 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-05 00:43:06,244 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-05 00:43:06,252 [ scc.git] DEBUG Already up to date. 2025-01-05 00:43:06,252 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2025-01-05 00:43:06,595 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2025-01-05 00:43:06,595 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2025-01-05 00:43:06,600 [ scc.git] DEBUG ## Unique users: [] 2025-01-05 00:43:06,600 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:43:06,600 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:43:06,607 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-01-05 00:43:06,614 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:43:06,620 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-01-05 00:43:06,660 [ scc.git] DEBUG Auto-merging Dockerfile 2025-01-05 00:43:06,660 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2025-01-05 00:43:06,660 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-05 00:43:06,661 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-05 00:43:06,668 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-01-05 00:43:06,676 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-01-05 00:43:06,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:06,821 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-01-05 00:43:06,829 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-01-05 00:43:06,836 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#297](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2025-01-05 00:43:06,842 [ scc.config] DEBUG Found github.token 2025-01-05 00:43:06,843 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2025-01-05 00:43:06,843 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-05 00:43:06,891 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:43:06,891 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:43:06,899 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:43:06,944 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-05 00:43:06,952 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f228c56da30> has no local changes 2025-01-05 00:43:06,952 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#297 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/)' 2025-01-05 00:43:06,963 [ scc.git] DEBUG [detached HEAD 33733cc] merge master -Dorg -Ssuccess-only 2025-01-05 00:43:06,964 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:06,964 [ scc.git] INFO Overriding base-branch from master to develop 2025-01-05 00:43:06,964 [ scc.repo] DEBUG ## PRs found: 2025-01-05 00:43:07,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-01-05 00:43:07,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-01-05 00:43:08,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-01-05 00:43:08,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-01-05 00:43:09,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:43:09,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-05 00:43:10,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-01-05 00:43:10,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:43:10,484 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-01-05 00:43:10,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-01-05 00:43:11,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-01-05 00:43:11,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-01-05 00:43:12,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-05 00:43:12,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-01-05 00:43:13,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-01-05 00:43:13,205 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-01-05 00:43:13,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-01-05 00:43:14,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-01-05 00:43:14,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-01-05 00:43:15,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-01-05 00:43:15,165 [ scc.repo] DEBUG ## Branches found: 2025-01-05 00:43:15,165 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-01-05 00:43:15,165 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:43:15,165 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:43:15,172 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-01-05 00:43:15,177 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-05 00:43:15,178 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-01-05 00:43:15,185 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-01-05 00:43:15,192 [ scc.git] DEBUG Already up to date. 2025-01-05 00:43:15,192 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-01-05 00:43:15,692 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-01-05 00:43:15,692 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-01-05 00:43:15,696 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-01-05 00:43:16,057 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-01-05 00:43:16,057 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-01-05 00:43:16,061 [ scc.git] DEBUG ## Unique users: [] 2025-01-05 00:43:16,061 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:43:16,062 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:43:16,067 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-01-05 00:43:16,075 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:43:16,080 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-01-05 00:43:16,128 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-01-05 00:43:16,128 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-05 00:43:16,129 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-05 00:43:16,135 [ scc.git] DEBUG Calling 'git reset --hard 4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-01-05 00:43:16,142 [ scc.git] DEBUG HEAD is now at 4b4c755 Bump version: 5.9.0 → 5.9.1.dev0 2025-01-05 00:43:16,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:16,280 [ scc.git] DEBUG Calling 'git merge-base 4b4c755af4ccf8a5e709548d1f8415fab48a4867 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-01-05 00:43:16,289 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-01-05 00:43:16,298 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#297](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-01-05 00:43:16,311 [ scc.config] DEBUG Found github.token 2025-01-05 00:43:16,312 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-01-05 00:43:16,312 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-01-05 00:43:16,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:43:16,327 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-01-05 00:43:16,339 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-05 00:43:16,341 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-01-05 00:43:16,341 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-01-05 00:43:16,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:16,694 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-05 00:43:16,740 [ scc.git] DEBUG Get sha1 of %s 2025-01-05 00:43:16,740 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-05 00:43:16,747 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:43:16,797 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-05 00:43:16,804 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f228c56d670> has no local changes 2025-01-05 00:43:16,805 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#297 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/)' 2025-01-05 00:43:16,815 [ scc.git] DEBUG [detached HEAD 5c36edb] merge master -Dorg -Ssuccess-only 2025-01-05 00:43:16,816 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:16,816 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-05 00:43:16,899 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2025-01-05 00:43:17,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:17,095 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2025-01-05 00:43:17,100 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2025-01-05 00:43:17,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:17,485 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2025-01-05 00:43:17,490 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2025-01-05 00:43:17,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:17,866 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2025-01-05 00:43:17,871 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2025-01-05 00:43:18,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:18,260 [ scc.config] DEBUG Found submodule.omero-figure.url 2025-01-05 00:43:18,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:18,638 [ scc.config] DEBUG Found submodule.omero-figure.branch 2025-01-05 00:43:18,643 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2025-01-05 00:43:19,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:19,021 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2025-01-05 00:43:19,027 [ scc.config] DEBUG Found submodule.omero-gallery.url 2025-01-05 00:43:19,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:19,408 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2025-01-05 00:43:19,415 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2025-01-05 00:43:19,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:19,799 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2025-01-05 00:43:19,805 [ scc.config] DEBUG Found submodule.omero-mapr.url 2025-01-05 00:43:20,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:20,186 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2025-01-05 00:43:20,192 [ scc.config] DEBUG Found submodule.omero-metadata.url 2025-01-05 00:43:20,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:20,567 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2025-01-05 00:43:20,573 [ scc.config] DEBUG Found submodule.omero-parade.url 2025-01-05 00:43:20,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:20,952 [ scc.config] DEBUG Found submodule.omero-parade.branch 2025-01-05 00:43:20,958 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2025-01-05 00:43:21,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:21,341 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2025-01-05 00:43:21,347 [ scc.config] DEBUG Found submodule.omero-rois.url 2025-01-05 00:43:21,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:21,779 [ scc.config] DEBUG Found submodule.omero-signup.url 2025-01-05 00:43:22,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:22,170 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2025-01-05 00:43:22,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:22,549 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2025-01-05 00:43:22,554 [ scc.config] DEBUG Found submodule.omero-upload.url 2025-01-05 00:43:22,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:22,954 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2025-01-05 00:43:23,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:23,329 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2025-01-05 00:43:23,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:23,733 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2025-01-05 00:43:23,740 [ scc.config] DEBUG Found submodule.omero-weberror.url 2025-01-05 00:43:24,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:24,113 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2025-01-05 00:43:24,121 [ scc.config] DEBUG Found submodule.omero-webtest.url 2025-01-05 00:43:24,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:24,614 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2025-01-05 00:43:24,618 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2025-01-05 00:43:25,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:25,020 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2025-01-05 00:43:25,027 [ scc.config] DEBUG Found submodule.scripts.url 2025-01-05 00:43:25,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-05 00:43:25,402 [ scc.config] DEBUG Found submodule.scripts.branch 2025-01-05 00:43:25,403 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-05 00:43:25,494 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f228dfb7be0> has local changes 2025-01-05 00:43:25,495 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Repository: ome/omero-prometheus-tools Already up to date. Repository: ome/omero-rois Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Merged PRs: - PR 20 jburel 'Build' Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#297 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/297/)' 2025-01-05 00:43:25,512 [ scc.git] DEBUG [detached HEAD e472378] merge master -Dorg -Ssuccess-only 2025-01-05 00:43:25,512 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2025-01-05 00:43:25,512 [ scc.merge] INFO Repository: ome/omero-plugins 2025-01-05 00:43:25,512 [ scc.merge] INFO Already up to date. 2025-01-05 00:43:25,512 [ scc.merge] INFO 2025-01-05 00:43:25,512 [ scc.merge] INFO Merged PRs: 2025-01-05 00:43:25,512 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-01-05 00:43:25,512 [ scc.merge] INFO 2025-01-05 00:43:25,512 [ scc.merge] INFO Repository: ome/minimal-omero-client 2025-01-05 00:43:25,512 [ scc.merge] INFO Already up to date. 2025-01-05 00:43:25,513 [ scc.merge] INFO 2025-01-05 00:43:25,513 [ scc.merge] INFO 2025-01-05 00:43:25,513 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2025-01-05 00:43:25,513 [ scc.merge] INFO Excluded PRs: 2025-01-05 00:43:25,513 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2025-01-05 00:43:25,513 [ scc.merge] INFO Already up to date. 2025-01-05 00:43:25,513 [ scc.merge] INFO 2025-01-05 00:43:25,513 [ scc.merge] INFO 2025-01-05 00:43:25,513 [ scc.merge] INFO Repository: ome/omero-cli-render 2025-01-05 00:43:25,513 [ scc.merge] INFO Excluded PRs: 2025-01-05 00:43:25,513 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2025-01-05 00:43:25,513 [ scc.merge] INFO Already up to date. 2025-01-05 00:43:25,513 [ scc.merge] INFO 2025-01-05 00:43:25,513 [ scc.merge] INFO Merged PRs: 2025-01-05 00:43:25,513 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2025-01-05 00:43:25,513 [ scc.merge] INFO 2025-01-05 00:43:25,513 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2025-01-05 00:43:25,513 [ scc.merge] INFO Excluded PRs: 2025-01-05 00:43:25,513 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-01-05 00:43:25,513 [ scc.merge] INFO Already up to date. 2025-01-05 00:43:25,513 [ scc.merge] INFO 2025-01-05 00:43:25,513 [ scc.merge] INFO Merged PRs: 2025-01-05 00:43:25,514 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2025-01-05 00:43:25,514 [ scc.merge] INFO 2025-01-05 00:43:25,514 [ scc.merge] INFO Conflicting PRs (not included): 2025-01-05 00:43:25,514 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2025-01-05 00:43:25,514 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2025-01-05 00:43:25,514 [ scc.merge] INFO 2025-01-05 00:43:25,514 [ scc.merge] INFO Repository: ome/omero-figure 2025-01-05 00:43:25,514 [ scc.merge] INFO Excluded PRs: 2025-01-05 00:43:25,514 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) 2025-01-05 00:43:25,514 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' (user: Rdornier) 2025-01-05 00:43:25,514 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2025-01-05 00:43:25,514 [ scc.merge] INFO Already up to date. 2025-01-05 00:43:25,514 [ scc.merge] INFO 2025-01-05 00:43:25,514 [ scc.merge] INFO 2025-01-05 00:43:25,514 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2025-01-05 00:43:25,514 [ scc.merge] INFO Already up to date. 2025-01-05 00:43:25,514 [ scc.merge] INFO 2025-01-05 00:43:25,514 [ scc.merge] INFO Merged PRs: 2025-01-05 00:43:25,514 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2025-01-05 00:43:25,514 [ scc.merge] INFO 2025-01-05 00:43:25,515 [ scc.merge] INFO Repository: ome/omero-gallery 2025-01-05 00:43:25,515 [ scc.merge] INFO Already up to date. 2025-01-05 00:43:25,515 [ scc.merge] INFO 2025-01-05 00:43:25,515 [ scc.merge] INFO Merged PRs: 2025-01-05 00:43:25,515 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-01-05 00:43:25,515 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-01-05 00:43:25,515 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-01-05 00:43:25,515 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-01-05 00:43:25,515 [ scc.merge] INFO 2025-01-05 00:43:25,515 [ scc.merge] INFO Conflicting PRs (not included): 2025-01-05 00:43:25,515 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-01-05 00:43:25,515 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-01-05 00:43:25,515 [ scc.merge] INFO 2025-01-05 00:43:25,515 [ scc.merge] INFO Repository: ome/omero-iviewer 2025-01-05 00:43:25,515 [ scc.merge] INFO Excluded PRs: 2025-01-05 00:43:25,515 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2025-01-05 00:43:25,515 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2025-01-05 00:43:25,515 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2025-01-05 00:43:25,515 [ scc.merge] INFO Already up to date. 2025-01-05 00:43:25,515 [ scc.merge] INFO 2025-01-05 00:43:25,515 [ scc.merge] INFO Merged PRs: 2025-01-05 00:43:25,515 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2025-01-05 00:43:25,516 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2025-01-05 00:43:25,516 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2025-01-05 00:43:25,516 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-01-05 00:43:25,516 [ scc.merge] INFO 2025-01-05 00:43:25,516 [ scc.merge] INFO Repository: ome/omero-mapr 2025-01-05 00:43:25,516 [ scc.merge] INFO Excluded PRs: 2025-01-05 00:43:25,516 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2025-01-05 00:43:25,516 [ scc.merge] INFO Already up to date. 2025-01-05 00:43:25,516 [ scc.merge] INFO 2025-01-05 00:43:25,516 [ scc.merge] INFO Merged PRs: 2025-01-05 00:43:25,516 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2025-01-05 00:43:25,516 [ scc.merge] INFO 2025-01-05 00:43:25,516 [ scc.merge] INFO Repository: ome/omero-metadata 2025-01-05 00:43:25,516 [ scc.merge] INFO Already up to date. 2025-01-05 00:43:25,516 [ scc.merge] INFO 2025-01-05 00:43:25,516 [ scc.merge] INFO Conflicting PRs (not included): 2025-01-05 00:43:25,516 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-01-05 00:43:25,516 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-01-05 00:43:25,516 [ scc.merge] INFO 2025-01-05 00:43:25,516 [ scc.merge] INFO Repository: ome/omero-parade 2025-01-05 00:43:25,516 [ scc.merge] INFO Excluded PRs: 2025-01-05 00:43:25,516 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2025-01-05 00:43:25,517 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2025-01-05 00:43:25,517 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2025-01-05 00:43:25,517 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2025-01-05 00:43:25,517 [ scc.merge] INFO Already up to date. 2025-01-05 00:43:25,517 [ scc.merge] INFO 2025-01-05 00:43:25,517 [ scc.merge] INFO 2025-01-05 00:43:25,517 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2025-01-05 00:43:25,517 [ scc.merge] INFO Already up to date. 2025-01-05 00:43:25,517 [ scc.merge] INFO 2025-01-05 00:43:25,517 [ scc.merge] INFO 2025-01-05 00:43:25,517 [ scc.merge] INFO Repository: ome/omero-rois 2025-01-05 00:43:25,517 [ scc.merge] INFO Already up to date. 2025-01-05 00:43:25,517 [ scc.merge] INFO 2025-01-05 00:43:25,517 [ scc.merge] INFO Merged PRs: 2025-01-05 00:43:25,517 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2025-01-05 00:43:25,517 [ scc.merge] INFO 2025-01-05 00:43:25,517 [ scc.merge] INFO Repository: ome/omero-signup 2025-01-05 00:43:25,517 [ scc.merge] INFO Already up to date. 2025-01-05 00:43:25,517 [ scc.merge] INFO 2025-01-05 00:43:25,517 [ scc.merge] INFO Conflicting PRs (not included): 2025-01-05 00:43:25,517 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2025-01-05 00:43:25,518 [ scc.merge] INFO 2025-01-05 00:43:25,518 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2025-01-05 00:43:25,518 [ scc.merge] INFO Excluded PRs: 2025-01-05 00:43:25,518 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2025-01-05 00:43:25,518 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2025-01-05 00:43:25,518 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) 2025-01-05 00:43:25,518 [ scc.merge] INFO Already up to date. 2025-01-05 00:43:25,518 [ scc.merge] INFO 2025-01-05 00:43:25,518 [ scc.merge] INFO Merged PRs: 2025-01-05 00:43:25,518 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-01-05 00:43:25,518 [ scc.merge] INFO 2025-01-05 00:43:25,518 [ scc.merge] INFO Repository: ome/omero-upload 2025-01-05 00:43:25,518 [ scc.merge] INFO Already up to date. 2025-01-05 00:43:25,518 [ scc.merge] INFO 2025-01-05 00:43:25,518 [ scc.merge] INFO 2025-01-05 00:43:25,518 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2025-01-05 00:43:25,518 [ scc.merge] INFO Already up to date. 2025-01-05 00:43:25,518 [ scc.merge] INFO 2025-01-05 00:43:25,518 [ scc.merge] INFO Merged PRs: 2025-01-05 00:43:25,518 [ scc.merge] INFO - PR 20 jburel 'Build' 2025-01-05 00:43:25,518 [ scc.merge] INFO 2025-01-05 00:43:25,518 [ scc.merge] INFO Repository: ome/omero-web-zarr 2025-01-05 00:43:25,519 [ scc.merge] INFO Excluded PRs: 2025-01-05 00:43:25,519 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure) 2025-01-05 00:43:25,519 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2025-01-05 00:43:25,519 [ scc.merge] INFO Already up to date. 2025-01-05 00:43:25,519 [ scc.merge] INFO 2025-01-05 00:43:25,519 [ scc.merge] INFO Conflicting PRs (not included): 2025-01-05 00:43:25,519 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-01-05 00:43:25,519 [ scc.merge] INFO 2025-01-05 00:43:25,519 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2025-01-05 00:43:25,519 [ scc.merge] INFO Already up to date. 2025-01-05 00:43:25,519 [ scc.merge] INFO 2025-01-05 00:43:25,519 [ scc.merge] INFO 2025-01-05 00:43:25,519 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2025-01-05 00:43:25,519 [ scc.merge] INFO Already up to date. 2025-01-05 00:43:25,519 [ scc.merge] INFO 2025-01-05 00:43:25,519 [ scc.merge] INFO 2025-01-05 00:43:25,519 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2025-01-05 00:43:25,519 [ scc.merge] INFO Already up to date. 2025-01-05 00:43:25,519 [ scc.merge] INFO 2025-01-05 00:43:25,519 [ scc.merge] INFO Conflicting PRs (not included): 2025-01-05 00:43:25,519 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2025-01-05 00:43:25,520 [ scc.merge] INFO 2025-01-05 00:43:25,520 [ scc.merge] INFO Repository: ome/scripts 2025-01-05 00:43:25,520 [ scc.merge] INFO Excluded PRs: 2025-01-05 00:43:25,520 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-01-05 00:43:25,520 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-01-05 00:43:25,520 [ scc.merge] INFO Already up to date. 2025-01-05 00:43:25,520 [ scc.merge] INFO 2025-01-05 00:43:25,520 [ scc.merge] INFO Merged PRs: 2025-01-05 00:43:25,520 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-01-05 00:43:25,520 [ scc.merge] INFO 2025-01-05 00:43:25,520 [ scc.merge] INFO Conflicting PRs (not included): 2025-01-05 00:43:25,520 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-01-05 00:43:25,520 [ scc.merge] INFO 2025-01-05 00:43:25,520 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-01-05 00:43:25,520 [ scc.git] DEBUG Calling 'git remote' 2025-01-05 00:43:25,528 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-01-05 00:43:25,528 [ scc.git] DEBUG Calling 'git remote' 2025-01-05 00:43:25,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:25,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-01-05 00:43:25,534 [ scc.git] DEBUG Calling 'git remote' 2025-01-05 00:43:25,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:25,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-01-05 00:43:25,540 [ scc.git] DEBUG Calling 'git remote' 2025-01-05 00:43:25,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:25,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-01-05 00:43:25,547 [ scc.git] DEBUG Calling 'git remote' 2025-01-05 00:43:25,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:25,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-01-05 00:43:25,553 [ scc.git] DEBUG Calling 'git remote' 2025-01-05 00:43:25,559 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:25,560 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-01-05 00:43:25,560 [ scc.git] DEBUG Calling 'git remote' 2025-01-05 00:43:25,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:25,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-01-05 00:43:25,566 [ scc.git] DEBUG Calling 'git remote' 2025-01-05 00:43:25,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:25,573 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-01-05 00:43:25,573 [ scc.git] DEBUG Calling 'git remote' 2025-01-05 00:43:25,579 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:25,580 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-01-05 00:43:25,580 [ scc.git] DEBUG Calling 'git remote' 2025-01-05 00:43:25,587 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:25,587 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-01-05 00:43:25,587 [ scc.git] DEBUG Calling 'git remote' 2025-01-05 00:43:25,595 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:25,595 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-01-05 00:43:25,595 [ scc.git] DEBUG Calling 'git remote' 2025-01-05 00:43:25,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:25,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-01-05 00:43:25,602 [ scc.git] DEBUG Calling 'git remote' 2025-01-05 00:43:25,609 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:25,610 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-01-05 00:43:25,610 [ scc.git] DEBUG Calling 'git remote' 2025-01-05 00:43:25,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:25,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-01-05 00:43:25,617 [ scc.git] DEBUG Calling 'git remote' 2025-01-05 00:43:25,624 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:25,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-01-05 00:43:25,625 [ scc.git] DEBUG Calling 'git remote' 2025-01-05 00:43:25,633 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:25,633 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-01-05 00:43:25,634 [ scc.git] DEBUG Calling 'git remote' 2025-01-05 00:43:25,639 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:25,639 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-01-05 00:43:25,639 [ scc.git] DEBUG Calling 'git remote' 2025-01-05 00:43:25,646 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:25,646 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-01-05 00:43:25,646 [ scc.git] DEBUG Calling 'git remote' 2025-01-05 00:43:25,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:25,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-01-05 00:43:25,652 [ scc.git] DEBUG Calling 'git remote' 2025-01-05 00:43:25,658 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:25,658 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-01-05 00:43:25,658 [ scc.git] DEBUG Calling 'git remote' 2025-01-05 00:43:25,663 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:25,663 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-01-05 00:43:25,663 [ scc.git] DEBUG Calling 'git remote' 2025-01-05 00:43:25,669 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-05 00:43:25,669 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-01-05 00:43:25,669 [ scc.git] DEBUG Calling 'git remote' 2025-01-05 00:43:25,675 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: 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or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD d0db9fe] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from fb316a7e nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from b4102d4 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 7d76711] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-01-05 00:44:11,811 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-01-05 00:44:20,720 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-01-05 00:44:23,054 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-01-05 00:44:27,579 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-01-05 00:45:05,697 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS