![[Jenkins]](/jenkins/static/695419c3/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 332 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 292 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.3.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.3.1 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.5.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.9-py3-none-any.whl.metadata (22 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.15-py2.py3-none-any.whl.metadata (5.5 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.12.14-py3-none-any.whl.metadata (2.3 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.5.0-py3-none-any.whl (375 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.9-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.15-py2.py3-none-any.whl (9.9 kB) Using cached certifi-2024.12.14-py3-none-any.whl (164 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (146 kB) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_28_x86_64.whl (4.2 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (82 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.15 PyGithub-2.5.0 PyYAML-6.0.2 certifi-2024.12.14 cffi-1.17.1 charset-normalizer-3.4.1 cryptography-44.0.0 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.9 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.17.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-01-06 00:43:15,172 [ scc.config] DEBUG Found github.token 2025-01-06 00:43:15,176 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-01-06 00:43:15,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:43:15,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:43:16,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-01-06 00:43:16,159 [ scc.gh] DEBUG 4087 remaining from 5000 (Reset at 00:01 2025-01-06 00:43:16,160 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-06 00:43:16,164 [ scc.git] DEBUG Check current status 2025-01-06 00:43:16,164 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:43:16,168 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-01-06 00:43:16,168 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:43:16,219 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-01-06 00:43:16,257 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-01-06 00:43:16,537 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-01-06 00:43:16,622 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-01-06 00:43:16,626 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-01-06 00:43:16,662 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-01-06 00:43:16,785 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-01-06 00:43:16,789 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-01-06 00:43:16,791 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-01-06 00:43:16,795 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-01-06 00:43:16,900 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-01-06 00:43:16,956 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-01-06 00:43:17,085 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-01-06 00:43:17,097 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-01-06 00:43:17,118 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-01-06 00:43:17,121 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-01-06 00:43:17,124 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-01-06 00:43:17,142 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-01-06 00:43:17,180 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-01-06 00:43:17,194 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-01-06 00:43:17,198 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-01-06 00:43:17,204 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-01-06 00:43:17,209 [ scc.config] DEBUG Found remote.origin.url 2025-01-06 00:43:17,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-01-06 00:43:17,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-06 00:43:18,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-06 00:43:18,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-06 00:43:19,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-06 00:43:19,113 [ scc.git] DEBUG Resetting... 2025-01-06 00:43:19,114 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-01-06 00:43:19,123 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-01-06 00:43:19,124 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-01-06 00:43:19,227 [ scc.git] DEBUG Check current status 2025-01-06 00:43:19,228 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:43:19,233 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-01-06 00:43:19,234 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:43:19,284 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-01-06 00:43:19,286 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-01-06 00:43:19,290 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-01-06 00:43:19,293 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-01-06 00:43:19,297 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-01-06 00:43:19,299 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-01-06 00:43:19,303 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-01-06 00:43:19,306 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-01-06 00:43:19,309 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-01-06 00:43:19,312 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-01-06 00:43:19,316 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-01-06 00:43:19,319 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-01-06 00:43:19,323 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-01-06 00:43:19,326 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-01-06 00:43:19,329 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-01-06 00:43:19,332 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-01-06 00:43:19,334 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-01-06 00:43:19,337 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-01-06 00:43:19,340 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-01-06 00:43:19,343 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-01-06 00:43:19,346 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-01-06 00:43:19,350 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-01-06 00:43:19,351 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-01-06 00:43:19,351 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-01-06 00:43:19,351 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-01-06 00:43:19,351 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-01-06 00:43:19,351 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-01-06 00:43:19,351 [ scc.repo] DEBUG ## PRs found: 2025-01-06 00:43:19,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-01-06 00:43:20,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-01-06 00:43:20,087 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-06 00:43:20,087 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-01-06 00:43:20,087 [ scc.repo] DEBUG ## Branches found: 2025-01-06 00:43:20,087 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:43:20,087 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:43:20,092 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-06 00:43:20,095 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-06 00:43:20,095 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-06 00:43:20,099 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-06 00:43:20,103 [ scc.git] DEBUG Already up to date. 2025-01-06 00:43:20,103 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-01-06 00:43:20,450 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-01-06 00:43:20,450 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-01-06 00:43:20,457 [ scc.git] DEBUG ## Unique users: [] 2025-01-06 00:43:20,457 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:43:20,457 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:43:20,461 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-01-06 00:43:20,475 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:43:20,479 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-01-06 00:43:20,495 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-06 00:43:20,497 [ scc.git] DEBUG scripts | 2 +- 2025-01-06 00:43:20,497 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-01-06 00:43:20,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:43:20,626 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-06 00:43:20,699 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-01-06 00:43:20,700 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:43:20,700 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:43:20,704 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-06 00:43:21,708 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f392f637370> has no local changes 2025-01-06 00:43:21,709 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' Generated by OMERO-plugins-push#298 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/)' 2025-01-06 00:43:21,785 [ scc.git] DEBUG [detached HEAD 47aa3b1] merge master -Dorg -Snone 2025-01-06 00:43:21,785 [ scc.merge] INFO Repository: ome/omero-plugins 2025-01-06 00:43:21,785 [ scc.merge] INFO Already up to date. 2025-01-06 00:43:21,786 [ scc.merge] INFO 2025-01-06 00:43:21,786 [ scc.merge] INFO Merged PRs: 2025-01-06 00:43:21,786 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-01-06 00:43:21,786 [ scc.merge] INFO 2025-01-06 00:43:21,786 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-01-06 00:43:21,786 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2025-01-06 00:43:29,901 [ scc.config] DEBUG Found github.token 2025-01-06 00:43:29,904 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-01-06 00:43:30,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:43:30,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:43:30,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-01-06 00:43:30,863 [ scc.gh] DEBUG 4077 remaining from 5000 (Reset at 00:01 2025-01-06 00:43:30,864 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-06 00:43:30,869 [ scc.git] DEBUG Check current status 2025-01-06 00:43:30,869 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:43:30,873 [ scc.git] DEBUG 47aa3b1 merge master -Dorg -Snone 2025-01-06 00:43:30,873 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:43:30,921 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-01-06 00:43:30,924 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-01-06 00:43:30,927 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-01-06 00:43:30,930 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-01-06 00:43:30,935 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-01-06 00:43:30,938 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-01-06 00:43:30,942 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-01-06 00:43:30,946 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-01-06 00:43:30,950 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-01-06 00:43:30,954 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-01-06 00:43:30,958 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-01-06 00:43:30,961 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-01-06 00:43:30,965 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-01-06 00:43:30,968 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-01-06 00:43:30,971 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-01-06 00:43:30,975 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-01-06 00:43:30,978 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-01-06 00:43:30,981 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-01-06 00:43:30,984 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-01-06 00:43:30,987 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-01-06 00:43:30,991 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-01-06 00:43:30,995 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2025-01-06 00:43:30,999 [ scc.config] DEBUG Found remote.origin.url 2025-01-06 00:43:31,000 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-01-06 00:43:31,002 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2025-01-06 00:43:31,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-01-06 00:43:31,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-06 00:43:32,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-06 00:43:32,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-06 00:43:33,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-06 00:43:33,155 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:43:33,226 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-01-06 00:43:33,226 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-06 00:43:33,229 [ scc.git] DEBUG Check current status 2025-01-06 00:43:33,230 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:43:33,233 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2025-01-06 00:43:33,233 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:43:33,273 [ scc.config] DEBUG Found remote.origin.url 2025-01-06 00:43:33,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2025-01-06 00:43:34,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-06 00:43:34,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-06 00:43:34,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-06 00:43:35,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-06 00:43:35,315 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:43:35,355 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:43:35,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-01-06 00:43:35,356 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-06 00:43:35,361 [ scc.git] DEBUG Check current status 2025-01-06 00:43:35,361 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:43:35,365 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2025-01-06 00:43:35,365 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:43:35,407 [ scc.config] DEBUG Found remote.origin.url 2025-01-06 00:43:35,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2025-01-06 00:43:36,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-06 00:43:36,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-06 00:43:37,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-06 00:43:37,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-06 00:43:37,497 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:43:37,539 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:43:37,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-01-06 00:43:37,540 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-06 00:43:37,544 [ scc.git] DEBUG Check current status 2025-01-06 00:43:37,544 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:43:37,549 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export 2025-01-06 00:43:37,549 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:43:37,597 [ scc.config] DEBUG Found remote.origin.url 2025-01-06 00:43:38,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2025-01-06 00:43:38,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-06 00:43:38,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-06 00:43:39,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-06 00:43:39,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-06 00:43:39,756 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:43:39,799 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:43:39,801 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-01-06 00:43:39,801 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-06 00:43:39,805 [ scc.git] DEBUG Check current status 2025-01-06 00:43:39,805 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:43:39,809 [ scc.git] DEBUG 11d3587 Merge pull request #165 from jburel/build 2025-01-06 00:43:39,810 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:43:39,861 [ scc.config] DEBUG Found remote.origin.url 2025-01-06 00:43:40,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2025-01-06 00:43:40,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-06 00:43:41,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-06 00:43:41,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-06 00:43:41,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-06 00:43:41,896 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:43:41,937 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:43:41,938 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-01-06 00:43:41,938 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-06 00:43:41,943 [ scc.git] DEBUG Check current status 2025-01-06 00:43:41,943 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:43:41,957 [ scc.git] DEBUG fb316a7e Bump version: 7.2.0 → 7.2.1.dev0 2025-01-06 00:43:41,958 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:43:42,008 [ scc.config] DEBUG Found remote.origin.url 2025-01-06 00:43:42,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2025-01-06 00:43:42,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-06 00:43:43,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-06 00:43:43,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-06 00:43:44,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-06 00:43:44,049 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:43:44,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:43:44,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-01-06 00:43:44,092 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-06 00:43:44,097 [ scc.git] DEBUG Check current status 2025-01-06 00:43:44,097 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:43:44,101 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2025-01-06 00:43:44,101 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:43:44,143 [ scc.config] DEBUG Found remote.origin.url 2025-01-06 00:43:44,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2025-01-06 00:43:44,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-06 00:43:45,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-06 00:43:45,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-06 00:43:46,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-06 00:43:46,172 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:43:46,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:43:46,213 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-01-06 00:43:46,213 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-06 00:43:46,218 [ scc.git] DEBUG Check current status 2025-01-06 00:43:46,218 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:43:46,222 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2025-01-06 00:43:46,223 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:43:46,266 [ scc.config] DEBUG Found remote.origin.url 2025-01-06 00:43:46,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2025-01-06 00:43:47,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-06 00:43:47,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-06 00:43:47,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-06 00:43:48,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-06 00:43:48,287 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:43:48,326 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:43:48,327 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-01-06 00:43:48,327 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-06 00:43:48,332 [ scc.git] DEBUG Check current status 2025-01-06 00:43:48,332 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:43:48,336 [ scc.git] DEBUG b4102d4 add dev 2025-01-06 00:43:48,336 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:43:48,380 [ scc.config] DEBUG Found remote.origin.url 2025-01-06 00:43:48,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2025-01-06 00:43:49,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-06 00:43:49,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-06 00:43:50,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-06 00:43:50,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-06 00:43:50,452 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:43:50,500 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:43:50,501 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-01-06 00:43:50,502 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-06 00:43:50,508 [ scc.git] DEBUG Check current status 2025-01-06 00:43:50,509 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:43:50,514 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2025-01-06 00:43:50,515 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:43:50,559 [ scc.config] DEBUG Found remote.origin.url 2025-01-06 00:43:50,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2025-01-06 00:43:51,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-06 00:43:51,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-06 00:43:52,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-06 00:43:52,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-06 00:43:52,612 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:43:52,659 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:43:52,660 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-01-06 00:43:52,660 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-06 00:43:52,665 [ scc.git] DEBUG Check current status 2025-01-06 00:43:52,666 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:43:52,671 [ scc.git] DEBUG 3cd120c Merge pull request #89 from jburel/build 2025-01-06 00:43:52,671 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:43:52,717 [ scc.config] DEBUG Found remote.origin.url 2025-01-06 00:43:53,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2025-01-06 00:43:53,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-06 00:43:53,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-06 00:43:54,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-06 00:43:54,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-06 00:43:54,720 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:43:54,762 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:43:54,763 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-01-06 00:43:54,764 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-06 00:43:54,768 [ scc.git] DEBUG Check current status 2025-01-06 00:43:54,769 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:43:54,773 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2025-01-06 00:43:54,773 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:43:54,816 [ scc.config] DEBUG Found remote.origin.url 2025-01-06 00:43:55,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2025-01-06 00:43:55,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-06 00:43:56,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-06 00:43:56,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-06 00:43:56,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-06 00:43:56,841 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:43:56,887 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:43:56,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-01-06 00:43:56,888 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-06 00:43:56,893 [ scc.git] DEBUG Check current status 2025-01-06 00:43:56,893 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:43:56,898 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2025-01-06 00:43:56,898 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:43:56,945 [ scc.config] DEBUG Found remote.origin.url 2025-01-06 00:43:57,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2025-01-06 00:43:57,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-06 00:43:58,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-06 00:43:58,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-06 00:43:58,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-06 00:43:58,965 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:43:59,007 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:43:59,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-01-06 00:43:59,008 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-06 00:43:59,013 [ scc.git] DEBUG Check current status 2025-01-06 00:43:59,014 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:43:59,018 [ scc.git] DEBUG bdfeb5e bump sphinx version 2025-01-06 00:43:59,018 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:43:59,063 [ scc.config] DEBUG Found remote.origin.url 2025-01-06 00:43:59,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2025-01-06 00:43:59,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-06 00:44:00,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-06 00:44:00,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-06 00:44:01,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-06 00:44:01,141 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:44:01,182 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:44:01,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-01-06 00:44:01,183 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-06 00:44:01,188 [ scc.git] DEBUG Check current status 2025-01-06 00:44:01,188 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:44:01,193 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2025-01-06 00:44:01,193 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:44:01,236 [ scc.config] DEBUG Found remote.origin.url 2025-01-06 00:44:01,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2025-01-06 00:44:02,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-06 00:44:02,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-06 00:44:02,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-06 00:44:03,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-06 00:44:03,332 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:44:03,373 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:44:03,374 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-01-06 00:44:03,374 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-06 00:44:03,379 [ scc.git] DEBUG Check current status 2025-01-06 00:44:03,380 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:44:03,385 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2025-01-06 00:44:03,385 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:44:03,428 [ scc.config] DEBUG Found remote.origin.url 2025-01-06 00:44:03,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-01-06 00:44:03,744 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-01-06 00:44:03,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2025-01-06 00:44:04,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-06 00:44:04,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-06 00:44:05,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-06 00:44:05,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-06 00:44:05,707 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:44:05,747 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:44:05,748 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-01-06 00:44:05,748 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-06 00:44:05,754 [ scc.git] DEBUG Check current status 2025-01-06 00:44:05,754 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:44:05,759 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2025-01-06 00:44:05,759 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:44:05,804 [ scc.config] DEBUG Found remote.origin.url 2025-01-06 00:44:06,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2025-01-06 00:44:06,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-06 00:44:07,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-06 00:44:07,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-06 00:44:07,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-06 00:44:07,868 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:44:07,908 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:44:07,909 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-01-06 00:44:07,909 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-06 00:44:07,914 [ scc.git] DEBUG Check current status 2025-01-06 00:44:07,914 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:44:07,920 [ scc.git] DEBUG deab817 update setup-python to v4 2025-01-06 00:44:07,921 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:44:07,995 [ scc.config] DEBUG Found remote.origin.url 2025-01-06 00:44:08,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2025-01-06 00:44:08,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-06 00:44:09,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-06 00:44:09,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-06 00:44:10,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-06 00:44:10,051 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:44:10,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:44:10,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-01-06 00:44:10,092 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-06 00:44:10,097 [ scc.git] DEBUG Check current status 2025-01-06 00:44:10,097 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:44:10,102 [ scc.git] DEBUG 8f3c313 Merge pull request #17 from jburel/build 2025-01-06 00:44:10,102 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:44:10,144 [ scc.config] DEBUG Found remote.origin.url 2025-01-06 00:44:10,145 [ scc.git] DEBUG Repository configuration: base-branch: main 2025-01-06 00:44:10,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2025-01-06 00:44:11,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-06 00:44:11,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-06 00:44:11,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-06 00:44:12,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-06 00:44:12,272 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:44:12,312 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:44:12,314 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-01-06 00:44:12,314 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-06 00:44:12,320 [ scc.git] DEBUG Check current status 2025-01-06 00:44:12,320 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:44:12,325 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2025-01-06 00:44:12,325 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:44:12,372 [ scc.config] DEBUG Found remote.origin.url 2025-01-06 00:44:12,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-01-06 00:44:12,684 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-01-06 00:44:12,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2025-01-06 00:44:13,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-06 00:44:13,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-06 00:44:14,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-06 00:44:14,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-06 00:44:14,582 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:44:14,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:44:14,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-01-06 00:44:14,626 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-06 00:44:14,632 [ scc.git] DEBUG Check current status 2025-01-06 00:44:14,632 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:44:14,637 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2025-01-06 00:44:14,638 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:44:14,681 [ scc.config] DEBUG Found remote.origin.url 2025-01-06 00:44:15,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-01-06 00:44:15,005 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-01-06 00:44:15,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2025-01-06 00:44:15,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-06 00:44:16,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-06 00:44:16,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-06 00:44:16,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-06 00:44:16,997 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:44:17,040 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:44:17,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-01-06 00:44:17,041 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-06 00:44:17,046 [ scc.git] DEBUG Check current status 2025-01-06 00:44:17,047 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:44:17,051 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-01-06 00:44:17,052 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:44:17,097 [ scc.config] DEBUG Found remote.origin.url 2025-01-06 00:44:17,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2025-01-06 00:44:17,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-06 00:44:18,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-06 00:44:18,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-06 00:44:19,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-06 00:44:19,177 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:44:19,218 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:44:19,219 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-01-06 00:44:19,220 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-06 00:44:19,225 [ scc.git] DEBUG Check current status 2025-01-06 00:44:19,226 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:44:19,252 [ scc.git] DEBUG 4b4c755 Bump version: 5.9.0 → 5.9.1.dev0 2025-01-06 00:44:19,252 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:44:19,298 [ scc.config] DEBUG Found remote.origin.url 2025-01-06 00:44:19,299 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-01-06 00:44:19,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-01-06 00:44:19,575 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-01-06 00:44:19,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2025-01-06 00:44:20,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-06 00:44:20,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-06 00:44:21,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-06 00:44:21,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-06 00:44:21,570 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:44:21,615 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:44:21,615 [ scc.git] DEBUG Resetting... 2025-01-06 00:44:21,615 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-01-06 00:44:21,625 [ scc.git] DEBUG HEAD is now at 47aa3b1 merge master -Dorg -Snone 2025-01-06 00:44:21,626 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-01-06 00:44:21,736 [ scc.git] DEBUG Check current status 2025-01-06 00:44:21,736 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-06 00:44:21,747 [ scc.git] DEBUG 47aa3b1 merge master -Dorg -Snone 2025-01-06 00:44:21,748 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-06 00:44:21,805 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-01-06 00:44:21,808 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-01-06 00:44:21,811 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-01-06 00:44:21,815 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-01-06 00:44:21,819 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-01-06 00:44:21,822 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-01-06 00:44:21,826 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-01-06 00:44:21,829 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-01-06 00:44:21,833 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-01-06 00:44:21,836 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-01-06 00:44:21,839 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-01-06 00:44:21,843 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-01-06 00:44:21,847 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-01-06 00:44:21,850 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-01-06 00:44:21,854 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-01-06 00:44:21,858 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-01-06 00:44:21,861 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-01-06 00:44:21,865 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-01-06 00:44:21,868 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-01-06 00:44:21,872 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-01-06 00:44:21,875 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-01-06 00:44:21,879 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2025-01-06 00:44:21,880 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-01-06 00:44:21,880 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-01-06 00:44:21,880 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-01-06 00:44:21,880 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-01-06 00:44:21,880 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-01-06 00:44:21,880 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-01-06 00:44:21,880 [ scc.repo] DEBUG ## PRs found: 2025-01-06 00:44:22,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-01-06 00:44:22,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-01-06 00:44:22,957 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-06 00:44:23,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-01-06 00:44:23,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:44:24,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-01-06 00:44:24,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:44:24,863 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-01-06 00:44:24,864 [ scc.repo] DEBUG ## Branches found: 2025-01-06 00:44:24,864 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:44:24,864 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:24,870 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-06 00:44:24,876 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-06 00:44:24,876 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-06 00:44:24,883 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-06 00:44:24,889 [ scc.git] DEBUG Already up to date. 2025-01-06 00:44:24,890 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-01-06 00:44:25,288 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-01-06 00:44:25,288 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-01-06 00:44:25,296 [ scc.git] DEBUG ## Unique users: [] 2025-01-06 00:44:25,297 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:44:25,297 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:25,302 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-01-06 00:44:25,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:25,313 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-01-06 00:44:25,318 [ scc.git] DEBUG Already up to date. 2025-01-06 00:44:25,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:44:25,467 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-06 00:44:25,525 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:44:25,526 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:25,531 [ scc.repo] DEBUG ## PRs found: 2025-01-06 00:44:25,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2025-01-06 00:44:25,882 [ scc.repo] DEBUG ## Branches found: 2025-01-06 00:44:25,882 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-01-06 00:44:25,882 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:44:25,882 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:25,889 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-06 00:44:25,896 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-06 00:44:25,896 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-06 00:44:25,902 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-06 00:44:25,909 [ scc.git] DEBUG Already up to date. 2025-01-06 00:44:25,909 [ scc.git] DEBUG ## Unique users: [] 2025-01-06 00:44:25,909 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:44:25,909 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:25,914 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-06 00:44:25,959 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:44:25,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:25,965 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:44:26,009 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-06 00:44:26,015 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b618852e0> has no local changes 2025-01-06 00:44:26,016 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#298 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/)' 2025-01-06 00:44:26,026 [ scc.git] DEBUG [detached HEAD 9845c2d] merge master -Dorg -Ssuccess-only 2025-01-06 00:44:26,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:44:26,027 [ scc.repo] DEBUG ## PRs found: 2025-01-06 00:44:26,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2025-01-06 00:44:26,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2025-01-06 00:44:27,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2025-01-06 00:44:27,312 [ scc.repo] DEBUG ## Branches found: 2025-01-06 00:44:27,312 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-01-06 00:44:27,313 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:44:27,313 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:27,319 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-06 00:44:27,325 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-06 00:44:27,325 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-06 00:44:27,331 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-06 00:44:27,345 [ scc.git] DEBUG Already up to date. 2025-01-06 00:44:27,345 [ scc.git] DEBUG ## Unique users: [] 2025-01-06 00:44:27,345 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:44:27,345 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:27,352 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-06 00:44:27,391 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:44:27,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:27,396 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:44:27,435 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-06 00:44:27,441 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b618859d0> has no local changes 2025-01-06 00:44:27,442 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Generated by OMERO-plugins-push#298 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/)' 2025-01-06 00:44:27,450 [ scc.git] DEBUG [detached HEAD 74daa99] merge master -Dorg -Ssuccess-only 2025-01-06 00:44:27,451 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:44:27,451 [ scc.repo] DEBUG ## PRs found: 2025-01-06 00:44:27,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2025-01-06 00:44:28,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2025-01-06 00:44:28,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2025-01-06 00:44:29,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-01-06 00:44:29,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:44:30,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-06 00:44:30,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-01-06 00:44:31,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:44:31,173 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2025-01-06 00:44:31,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2025-01-06 00:44:32,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2025-01-06 00:44:32,093 [ scc.repo] DEBUG ## Branches found: 2025-01-06 00:44:32,093 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-01-06 00:44:32,093 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:44:32,093 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:32,099 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-06 00:44:32,104 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-06 00:44:32,104 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-06 00:44:32,109 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-06 00:44:32,114 [ scc.git] DEBUG Already up to date. 2025-01-06 00:44:32,115 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2025-01-06 00:44:32,584 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-01-06 00:44:32,585 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2025-01-06 00:44:32,590 [ scc.git] DEBUG ## Unique users: [] 2025-01-06 00:44:32,590 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:44:32,590 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:32,596 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a' 2025-01-06 00:44:32,603 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:32,609 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a' 2025-01-06 00:44:32,631 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-06 00:44:32,634 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++--------------------- 2025-01-06 00:44:32,634 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-) 2025-01-06 00:44:32,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:44:32,795 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-06 00:44:32,839 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:44:32,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:32,845 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:44:32,888 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-06 00:44:32,895 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b62506070> has no local changes 2025-01-06 00:44:32,896 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#298 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/)' 2025-01-06 00:44:32,906 [ scc.git] DEBUG [detached HEAD 7d7ad49] merge master -Dorg -Ssuccess-only 2025-01-06 00:44:32,906 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:44:32,906 [ scc.repo] DEBUG ## PRs found: 2025-01-06 00:44:33,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2025-01-06 00:44:33,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2025-01-06 00:44:34,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2025-01-06 00:44:34,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2025-01-06 00:44:35,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2025-01-06 00:44:35,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:44:36,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-06 00:44:36,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2025-01-06 00:44:37,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2025-01-06 00:44:37,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2025-01-06 00:44:37,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2025-01-06 00:44:37,972 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2025-01-06 00:44:38,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2025-01-06 00:44:39,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2025-01-06 00:44:39,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2025-01-06 00:44:40,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2025-01-06 00:44:40,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:44:40,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2025-01-06 00:44:41,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:44:41,341 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2025-01-06 00:44:41,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2025-01-06 00:44:42,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2025-01-06 00:44:42,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2025-01-06 00:44:43,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:44:43,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2025-01-06 00:44:44,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:44:44,247 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2025-01-06 00:44:44,247 [ scc.repo] DEBUG ## Branches found: 2025-01-06 00:44:44,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-01-06 00:44:44,248 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:44:44,248 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:44,254 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-06 00:44:44,259 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-06 00:44:44,259 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-06 00:44:44,265 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-06 00:44:44,271 [ scc.git] DEBUG Already up to date. 2025-01-06 00:44:44,272 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2025-01-06 00:44:44,624 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-01-06 00:44:44,624 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2025-01-06 00:44:44,630 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2025-01-06 00:44:45,356 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-01-06 00:44:45,356 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2025-01-06 00:44:45,361 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2025-01-06 00:44:45,835 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-01-06 00:44:45,835 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2025-01-06 00:44:45,841 [ scc.git] DEBUG ## Unique users: [] 2025-01-06 00:44:45,841 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:44:45,841 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:45,847 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2025-01-06 00:44:45,854 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:45,859 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2025-01-06 00:44:45,927 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2025-01-06 00:44:45,927 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2025-01-06 00:44:45,927 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2025-01-06 00:44:45,927 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-06 00:44:45,928 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-06 00:44:45,934 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2025-01-06 00:44:45,941 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2025-01-06 00:44:46,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:44:46,088 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2025-01-06 00:44:46,096 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..11d35873542022d9638ede115d0dfab4652f8e62' 2025-01-06 00:44:46,102 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#298](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2025-01-06 00:44:46,107 [ scc.config] DEBUG Found github.token 2025-01-06 00:44:46,107 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2025-01-06 00:44:46,108 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2025-01-06 00:44:46,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:46,119 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2025-01-06 00:44:46,151 [ scc.git] DEBUG Auto-merging .isort.cfg 2025-01-06 00:44:46,151 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2025-01-06 00:44:46,151 [ scc.git] DEBUG Auto-merging setup.py 2025-01-06 00:44:46,151 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2025-01-06 00:44:46,151 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2025-01-06 00:44:46,152 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2025-01-06 00:44:46,152 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2025-01-06 00:44:46,152 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-06 00:44:46,152 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-06 00:44:46,158 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2025-01-06 00:44:46,165 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2025-01-06 00:44:46,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:44:46,491 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 553b35f498764274f8dc882fb54c7e0a30fb6737' 2025-01-06 00:44:46,498 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..11d35873542022d9638ede115d0dfab4652f8e62' 2025-01-06 00:44:46,504 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#298](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2025-01-06 00:44:46,510 [ scc.config] DEBUG Found github.token 2025-01-06 00:44:46,510 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2025-01-06 00:44:46,510 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2025-01-06 00:44:46,517 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:46,522 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2025-01-06 00:44:46,535 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2025-01-06 00:44:46,536 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2025-01-06 00:44:46,536 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-06 00:44:46,539 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2025-01-06 00:44:46,539 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2025-01-06 00:44:46,539 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2025-01-06 00:44:46,539 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2025-01-06 00:44:46,539 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2025-01-06 00:44:46,540 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2025-01-06 00:44:46,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:44:46,878 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-06 00:44:46,919 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:44:46,919 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:46,924 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:44:46,964 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-06 00:44:46,971 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b607ae4f0> has no local changes 2025-01-06 00:44:46,971 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#298 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/)' 2025-01-06 00:44:46,980 [ scc.git] DEBUG [detached HEAD 66b012c] merge master -Dorg -Ssuccess-only 2025-01-06 00:44:46,980 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:44:46,980 [ scc.repo] DEBUG ## PRs found: 2025-01-06 00:44:47,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2025-01-06 00:44:47,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605 HTTP/1.1" 200 None 2025-01-06 00:44:48,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2025-01-06 00:44:48,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2025-01-06 00:44:48,879 [ scc.repo] DEBUG ## Branches found: 2025-01-06 00:44:48,880 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-01-06 00:44:48,880 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:44:48,880 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:48,886 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-06 00:44:48,892 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-06 00:44:48,892 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-06 00:44:48,898 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-06 00:44:48,904 [ scc.git] DEBUG Already up to date. 2025-01-06 00:44:48,904 [ scc.git] DEBUG ## Unique users: [] 2025-01-06 00:44:48,904 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:44:48,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:48,910 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-06 00:44:48,952 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:44:48,953 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:48,958 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:44:48,999 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-06 00:44:49,007 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b60790580> has no local changes 2025-01-06 00:44:49,007 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Generated by OMERO-plugins-push#298 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/)' 2025-01-06 00:44:49,016 [ scc.git] DEBUG [detached HEAD 7d441e53] merge master -Dorg -Ssuccess-only 2025-01-06 00:44:49,017 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:44:49,017 [ scc.repo] DEBUG ## PRs found: 2025-01-06 00:44:49,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2025-01-06 00:44:49,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2025-01-06 00:44:50,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2025-01-06 00:44:50,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-01-06 00:44:51,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:44:51,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-01-06 00:44:52,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:44:52,354 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2025-01-06 00:44:52,355 [ scc.repo] DEBUG ## Branches found: 2025-01-06 00:44:52,355 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-01-06 00:44:52,355 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:44:52,355 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:52,362 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-06 00:44:52,367 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-06 00:44:52,368 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-06 00:44:52,374 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-06 00:44:52,380 [ scc.git] DEBUG Already up to date. 2025-01-06 00:44:52,381 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2025-01-06 00:44:52,752 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-01-06 00:44:52,752 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2025-01-06 00:44:52,756 [ scc.git] DEBUG ## Unique users: [] 2025-01-06 00:44:52,757 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:44:52,757 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:52,762 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-01-06 00:44:52,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:52,776 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-01-06 00:44:52,809 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2025-01-06 00:44:52,810 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-06 00:44:52,813 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2025-01-06 00:44:52,813 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2025-01-06 00:44:52,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:44:52,961 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-06 00:44:53,006 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:44:53,006 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:44:53,014 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:44:53,056 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-06 00:44:53,064 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b607a59a0> has no local changes 2025-01-06 00:44:53,064 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#298 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/)' 2025-01-06 00:44:53,074 [ scc.git] DEBUG [detached HEAD 0aa3534] merge master -Dorg -Ssuccess-only 2025-01-06 00:44:53,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:44:53,074 [ scc.repo] DEBUG ## PRs found: 2025-01-06 00:44:53,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2025-01-06 00:44:53,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2025-01-06 00:44:54,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2025-01-06 00:44:55,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2025-01-06 00:44:55,016 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-06 00:44:55,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-01-06 00:44:56,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:44:56,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-06 00:44:57,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-01-06 00:44:57,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:44:57,586 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-01-06 00:44:58,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2025-01-06 00:44:58,055 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-06 00:44:58,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-01-06 00:44:59,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:44:59,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-06 00:45:00,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-01-06 00:45:00,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:45:00,573 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-01-06 00:45:01,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2025-01-06 00:45:01,102 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-06 00:45:01,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-01-06 00:45:02,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:45:02,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-06 00:45:03,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-01-06 00:45:03,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:45:03,557 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-01-06 00:45:04,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2025-01-06 00:45:04,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2025-01-06 00:45:04,463 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-06 00:45:05,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-01-06 00:45:05,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:45:06,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-06 00:45:06,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-01-06 00:45:06,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:45:06,935 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-01-06 00:45:07,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2025-01-06 00:45:07,412 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-06 00:45:07,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-01-06 00:45:08,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:45:08,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-06 00:45:09,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-01-06 00:45:09,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:45:09,947 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-01-06 00:45:10,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2025-01-06 00:45:10,432 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-06 00:45:11,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-01-06 00:45:11,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:45:12,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-06 00:45:12,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-01-06 00:45:13,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:45:13,118 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-01-06 00:45:13,118 [ scc.repo] DEBUG ## Branches found: 2025-01-06 00:45:13,118 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-01-06 00:45:13,119 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:45:13,119 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:13,126 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-06 00:45:13,132 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-06 00:45:13,133 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-06 00:45:13,139 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-06 00:45:13,146 [ scc.git] DEBUG Already up to date. 2025-01-06 00:45:13,146 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2025-01-06 00:45:13,479 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-01-06 00:45:13,480 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2025-01-06 00:45:13,485 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2025-01-06 00:45:13,782 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-01-06 00:45:13,782 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2025-01-06 00:45:13,787 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2025-01-06 00:45:14,098 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-01-06 00:45:14,098 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2025-01-06 00:45:14,103 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2025-01-06 00:45:14,402 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-01-06 00:45:14,403 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2025-01-06 00:45:14,409 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2025-01-06 00:45:14,693 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-01-06 00:45:14,693 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2025-01-06 00:45:14,698 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2025-01-06 00:45:15,019 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-01-06 00:45:15,020 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2025-01-06 00:45:15,024 [ scc.git] DEBUG ## Unique users: [] 2025-01-06 00:45:15,024 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:45:15,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:15,031 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-01-06 00:45:15,087 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:15,094 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-01-06 00:45:15,123 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-06 00:45:15,129 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2025-01-06 00:45:15,129 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2025-01-06 00:45:15,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:45:15,293 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-01-06 00:45:15,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:15,314 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-01-06 00:45:15,378 [ scc.git] DEBUG Auto-merging package-lock.json 2025-01-06 00:45:15,378 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-06 00:45:15,384 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2025-01-06 00:45:15,384 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2025-01-06 00:45:15,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:45:15,685 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-01-06 00:45:15,696 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:15,701 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-01-06 00:45:15,739 [ scc.git] DEBUG Auto-merging package-lock.json 2025-01-06 00:45:15,739 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-01-06 00:45:15,739 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-06 00:45:15,740 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-06 00:45:15,746 [ scc.git] DEBUG Calling 'git reset --hard 8083f138f16600554132bc7d4f316f9b11cff0b2' 2025-01-06 00:45:15,753 [ scc.git] DEBUG HEAD is now at 8083f13 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2025-01-06 00:45:16,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:45:16,074 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-01-06 00:45:16,081 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-01-06 00:45:16,087 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#298](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2025-01-06 00:45:16,093 [ scc.config] DEBUG Found github.token 2025-01-06 00:45:16,093 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2025-01-06 00:45:16,093 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-01-06 00:45:16,115 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:16,121 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-01-06 00:45:16,183 [ scc.git] DEBUG Auto-merging package-lock.json 2025-01-06 00:45:16,184 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-06 00:45:16,189 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2025-01-06 00:45:16,189 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2025-01-06 00:45:16,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:45:16,489 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-01-06 00:45:16,513 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:16,518 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-01-06 00:45:16,578 [ scc.git] DEBUG Auto-merging package-lock.json 2025-01-06 00:45:16,579 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-06 00:45:16,583 [ scc.git] DEBUG package-lock.json | 6 +++--- 2025-01-06 00:45:16,584 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2025-01-06 00:45:16,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:45:16,870 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-01-06 00:45:16,897 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:16,903 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-01-06 00:45:17,016 [ scc.git] DEBUG Auto-merging package-lock.json 2025-01-06 00:45:17,016 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-01-06 00:45:17,016 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-06 00:45:17,017 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-06 00:45:17,023 [ scc.git] DEBUG Calling 'git reset --hard 9710325b12ee18af6b78a67724a3a59321d8d084' 2025-01-06 00:45:17,033 [ scc.git] DEBUG HEAD is now at 9710325 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-01-06 00:45:17,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:45:17,262 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-01-06 00:45:17,267 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-01-06 00:45:17,273 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#298](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2025-01-06 00:45:17,279 [ scc.config] DEBUG Found github.token 2025-01-06 00:45:17,280 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2025-01-06 00:45:17,280 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-06 00:45:17,325 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:45:17,326 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:17,331 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:45:17,372 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-06 00:45:17,380 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b607abb20> has no local changes 2025-01-06 00:45:17,380 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Generated by OMERO-plugins-push#298 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/)' 2025-01-06 00:45:17,390 [ scc.git] DEBUG [detached HEAD 457f192] merge master -Dorg -Ssuccess-only 2025-01-06 00:45:17,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:45:17,391 [ scc.repo] DEBUG ## PRs found: 2025-01-06 00:45:17,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2025-01-06 00:45:18,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2025-01-06 00:45:18,230 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-06 00:45:18,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-01-06 00:45:19,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:45:19,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-06 00:45:20,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-01-06 00:45:20,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:45:20,844 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-01-06 00:45:21,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2025-01-06 00:45:21,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2025-01-06 00:45:22,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2025-01-06 00:45:22,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2025-01-06 00:45:23,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-01-06 00:45:23,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:45:24,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-06 00:45:24,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-01-06 00:45:25,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:45:25,119 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2025-01-06 00:45:25,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2025-01-06 00:45:26,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2025-01-06 00:45:26,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-01-06 00:45:27,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:45:27,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-06 00:45:28,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-01-06 00:45:28,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:45:28,484 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2025-01-06 00:45:28,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2025-01-06 00:45:29,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2025-01-06 00:45:29,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-01-06 00:45:30,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:45:30,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-01-06 00:45:31,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:45:31,254 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2025-01-06 00:45:31,255 [ scc.repo] DEBUG ## Branches found: 2025-01-06 00:45:31,255 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-01-06 00:45:31,255 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:45:31,255 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:31,261 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-06 00:45:31,265 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-06 00:45:31,266 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-06 00:45:31,286 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-06 00:45:31,294 [ scc.git] DEBUG Already up to date. 2025-01-06 00:45:31,294 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2025-01-06 00:45:32,800 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-01-06 00:45:32,800 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2025-01-06 00:45:32,805 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2025-01-06 00:45:33,697 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-01-06 00:45:33,697 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2025-01-06 00:45:33,703 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2025-01-06 00:45:34,137 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-01-06 00:45:34,137 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2025-01-06 00:45:34,142 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2025-01-06 00:45:34,442 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-01-06 00:45:34,442 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2025-01-06 00:45:34,449 [ scc.git] DEBUG ## Unique users: [] 2025-01-06 00:45:34,449 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:45:34,449 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:34,457 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-01-06 00:45:34,465 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:34,471 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-01-06 00:45:34,541 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2025-01-06 00:45:34,541 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-06 00:45:34,545 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2025-01-06 00:45:34,545 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2025-01-06 00:45:34,545 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2025-01-06 00:45:34,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:45:34,680 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2025-01-06 00:45:34,689 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:34,694 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2025-01-06 00:45:35,154 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2025-01-06 00:45:35,154 [ scc.git] DEBUG Auto-merging src/app/context.js 2025-01-06 00:45:35,154 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2025-01-06 00:45:35,154 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2025-01-06 00:45:35,155 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-06 00:45:35,160 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2025-01-06 00:45:35,160 [ scc.git] DEBUG src/app/context.js | 6 +- 2025-01-06 00:45:35,160 [ scc.git] DEBUG src/app/header.html | 5 + 2025-01-06 00:45:35,160 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2025-01-06 00:45:35,160 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2025-01-06 00:45:35,160 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2025-01-06 00:45:35,160 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2025-01-06 00:45:35,160 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2025-01-06 00:45:35,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:45:35,331 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2025-01-06 00:45:35,340 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:35,345 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2025-01-06 00:45:35,405 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2025-01-06 00:45:35,406 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-06 00:45:35,409 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2025-01-06 00:45:35,409 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2025-01-06 00:45:35,409 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2025-01-06 00:45:35,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:45:35,722 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-01-06 00:45:35,752 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:35,757 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-01-06 00:45:35,839 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-06 00:45:35,850 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2025-01-06 00:45:35,850 [ scc.git] DEBUG package.json | 2 +- 2025-01-06 00:45:35,850 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2025-01-06 00:45:36,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:45:36,116 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-06 00:45:36,162 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:45:36,162 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:36,168 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:45:36,211 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-06 00:45:36,222 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b60780e80> has no local changes 2025-01-06 00:45:36,222 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Generated by OMERO-plugins-push#298 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/)' 2025-01-06 00:45:36,232 [ scc.git] DEBUG [detached HEAD 86b990d] merge master -Dorg -Ssuccess-only 2025-01-06 00:45:36,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:45:36,233 [ scc.repo] DEBUG ## PRs found: 2025-01-06 00:45:36,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2025-01-06 00:45:37,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2025-01-06 00:45:37,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2025-01-06 00:45:38,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-01-06 00:45:38,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:45:39,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-01-06 00:45:39,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:45:39,540 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2025-01-06 00:45:39,541 [ scc.repo] DEBUG ## Branches found: 2025-01-06 00:45:39,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-01-06 00:45:39,541 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:45:39,541 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:39,547 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-06 00:45:39,554 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-06 00:45:39,554 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-06 00:45:39,561 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-06 00:45:39,568 [ scc.git] DEBUG Already up to date. 2025-01-06 00:45:39,568 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2025-01-06 00:45:40,251 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-01-06 00:45:40,252 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2025-01-06 00:45:40,256 [ scc.git] DEBUG ## Unique users: [] 2025-01-06 00:45:40,257 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:45:40,257 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:40,262 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-01-06 00:45:40,269 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:40,274 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-01-06 00:45:40,285 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-06 00:45:40,288 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2025-01-06 00:45:40,288 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2025-01-06 00:45:40,288 [ scc.git] DEBUG requirements.txt | 2 +- 2025-01-06 00:45:40,288 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2025-01-06 00:45:40,289 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2025-01-06 00:45:40,289 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2025-01-06 00:45:40,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:45:40,427 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-06 00:45:40,473 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:45:40,474 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:40,481 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:45:40,527 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-06 00:45:40,534 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b6072d5b0> has no local changes 2025-01-06 00:45:40,534 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#298 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/)' 2025-01-06 00:45:40,543 [ scc.git] DEBUG [detached HEAD fcdd521] merge master -Dorg -Ssuccess-only 2025-01-06 00:45:40,544 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:45:40,544 [ scc.repo] DEBUG ## PRs found: 2025-01-06 00:45:40,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2025-01-06 00:45:41,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2025-01-06 00:45:41,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2025-01-06 00:45:42,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-01-06 00:45:42,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:45:43,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-01-06 00:45:43,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:45:43,730 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-01-06 00:45:44,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2025-01-06 00:45:44,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2025-01-06 00:45:45,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-01-06 00:45:45,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:45:46,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-01-06 00:45:46,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:45:46,544 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-01-06 00:45:46,544 [ scc.repo] DEBUG ## Branches found: 2025-01-06 00:45:46,544 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-01-06 00:45:46,544 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:45:46,544 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:46,550 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-06 00:45:46,554 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-06 00:45:46,555 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-06 00:45:46,560 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-06 00:45:46,565 [ scc.git] DEBUG Already up to date. 2025-01-06 00:45:46,566 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2025-01-06 00:45:47,522 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-01-06 00:45:47,523 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2025-01-06 00:45:47,528 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2025-01-06 00:45:48,273 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-01-06 00:45:48,273 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2025-01-06 00:45:48,279 [ scc.git] DEBUG ## Unique users: [] 2025-01-06 00:45:48,279 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:45:48,279 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:48,285 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-01-06 00:45:48,293 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:48,299 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-01-06 00:45:48,485 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2025-01-06 00:45:48,485 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2025-01-06 00:45:48,486 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-01-06 00:45:48,486 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-01-06 00:45:48,486 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-06 00:45:48,487 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-06 00:45:48,495 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-01-06 00:45:48,504 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build 2025-01-06 00:45:48,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:45:48,677 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-01-06 00:45:48,685 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-01-06 00:45:48,739 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#298](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2025-01-06 00:45:48,746 [ scc.config] DEBUG Found github.token 2025-01-06 00:45:48,746 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2025-01-06 00:45:48,746 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2025-01-06 00:45:48,754 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:48,759 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2025-01-06 00:45:48,863 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-01-06 00:45:48,864 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-01-06 00:45:48,864 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2025-01-06 00:45:48,864 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-06 00:45:48,864 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-06 00:45:48,871 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-01-06 00:45:48,879 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build 2025-01-06 00:45:49,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:45:49,082 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 78e55539b68e351ed5ef202854718b49a37729a7' 2025-01-06 00:45:49,092 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-01-06 00:45:49,099 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#298](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2025-01-06 00:45:49,104 [ scc.config] DEBUG Found github.token 2025-01-06 00:45:49,104 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2025-01-06 00:45:49,104 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-06 00:45:49,151 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:45:49,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:49,157 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:45:49,203 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-06 00:45:49,219 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b60740b80> has no local changes 2025-01-06 00:45:49,219 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#298 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/)' 2025-01-06 00:45:49,233 [ scc.git] DEBUG [detached HEAD 3854f85] merge master -Dorg -Ssuccess-only 2025-01-06 00:45:49,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:45:49,234 [ scc.repo] DEBUG ## PRs found: 2025-01-06 00:45:49,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2025-01-06 00:45:50,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2025-01-06 00:45:50,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2025-01-06 00:45:51,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2025-01-06 00:45:51,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2025-01-06 00:45:51,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2025-01-06 00:45:52,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2025-01-06 00:45:52,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2025-01-06 00:45:52,996 [ scc.repo] DEBUG ## Branches found: 2025-01-06 00:45:52,996 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-01-06 00:45:52,997 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:45:52,997 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:53,004 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-06 00:45:53,010 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-06 00:45:53,010 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-06 00:45:53,017 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-06 00:45:53,024 [ scc.git] DEBUG Already up to date. 2025-01-06 00:45:53,025 [ scc.git] DEBUG ## Unique users: [] 2025-01-06 00:45:53,025 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:45:53,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:53,031 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-06 00:45:53,078 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:45:53,078 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:53,084 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:45:53,131 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-06 00:45:53,139 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b6075ff40> has no local changes 2025-01-06 00:45:53,140 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Generated by OMERO-plugins-push#298 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/)' 2025-01-06 00:45:53,199 [ scc.git] DEBUG [detached HEAD 729e324] merge master -Dorg -Ssuccess-only 2025-01-06 00:45:53,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:45:53,200 [ scc.repo] DEBUG ## PRs found: 2025-01-06 00:45:53,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 2 2025-01-06 00:45:53,376 [ scc.repo] DEBUG ## Branches found: 2025-01-06 00:45:53,376 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-01-06 00:45:53,376 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:45:53,376 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:53,383 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-06 00:45:53,389 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-06 00:45:53,390 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-06 00:45:53,397 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-06 00:45:53,404 [ scc.git] DEBUG Already up to date. 2025-01-06 00:45:53,404 [ scc.git] DEBUG ## Unique users: [] 2025-01-06 00:45:53,404 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:45:53,404 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:53,410 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-06 00:45:53,455 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:45:53,455 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:53,461 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:45:53,506 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-06 00:45:53,512 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b606e3940> has no local changes 2025-01-06 00:45:53,513 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Generated by OMERO-plugins-push#298 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/)' 2025-01-06 00:45:53,523 [ scc.git] DEBUG [detached HEAD af25dda] merge master -Dorg -Ssuccess-only 2025-01-06 00:45:53,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:45:53,523 [ scc.repo] DEBUG ## PRs found: 2025-01-06 00:45:53,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2025-01-06 00:45:54,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2025-01-06 00:45:54,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2025-01-06 00:45:55,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2025-01-06 00:45:55,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:45:56,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2025-01-06 00:45:56,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:45:56,745 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2025-01-06 00:45:56,745 [ scc.repo] DEBUG ## Branches found: 2025-01-06 00:45:56,746 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-01-06 00:45:56,746 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:45:56,746 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:56,753 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-06 00:45:56,761 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-06 00:45:56,762 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-06 00:45:56,771 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-06 00:45:56,778 [ scc.git] DEBUG Already up to date. 2025-01-06 00:45:56,779 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2025-01-06 00:45:57,310 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-01-06 00:45:57,310 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2025-01-06 00:45:57,315 [ scc.git] DEBUG ## Unique users: [] 2025-01-06 00:45:57,315 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:45:57,315 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:57,320 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2025-01-06 00:45:57,327 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:57,333 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2025-01-06 00:45:57,345 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2025-01-06 00:45:57,345 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-06 00:45:57,348 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2025-01-06 00:45:57,348 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2025-01-06 00:45:57,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:45:57,487 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-06 00:45:57,528 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:45:57,529 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:45:57,534 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:45:57,576 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-06 00:45:57,583 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b6069d5e0> has no local changes 2025-01-06 00:45:57,583 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#298 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/)' 2025-01-06 00:45:57,592 [ scc.git] DEBUG [detached HEAD 69353f4] merge master -Dorg -Ssuccess-only 2025-01-06 00:45:57,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:45:57,593 [ scc.repo] DEBUG ## PRs found: 2025-01-06 00:45:57,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2025-01-06 00:45:58,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2025-01-06 00:45:58,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2025-01-06 00:45:59,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-01-06 00:45:59,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:46:00,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-01-06 00:46:00,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:46:00,871 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2025-01-06 00:46:00,871 [ scc.repo] DEBUG ## Branches found: 2025-01-06 00:46:00,871 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-01-06 00:46:00,871 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:00,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:00,878 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-06 00:46:00,883 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-06 00:46:00,883 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-06 00:46:00,902 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-06 00:46:00,933 [ scc.git] DEBUG Already up to date. 2025-01-06 00:46:00,933 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-01-06 00:46:01,299 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-01-06 00:46:01,299 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-01-06 00:46:01,305 [ scc.git] DEBUG ## Unique users: [] 2025-01-06 00:46:01,305 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:01,305 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:01,310 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-01-06 00:46:01,317 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:01,322 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-01-06 00:46:01,375 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2025-01-06 00:46:01,376 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2025-01-06 00:46:01,376 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2025-01-06 00:46:01,376 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2025-01-06 00:46:01,376 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2025-01-06 00:46:01,376 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2025-01-06 00:46:01,376 [ scc.git] DEBUG Auto-merging setup.py 2025-01-06 00:46:01,376 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2025-01-06 00:46:01,376 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-06 00:46:01,376 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-06 00:46:01,382 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2025-01-06 00:46:01,388 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2025-01-06 00:46:01,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:01,534 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-01-06 00:46:01,540 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2025-01-06 00:46:01,564 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#298](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - omero_signup/views.py - omero_signup/signup_settings.py - setup.py --conflicts 2025-01-06 00:46:01,569 [ scc.config] DEBUG Found github.token 2025-01-06 00:46:01,569 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2025-01-06 00:46:01,569 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-06 00:46:01,609 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:01,610 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:01,615 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:46:01,659 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-06 00:46:01,665 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b6069d7f0> has no local changes 2025-01-06 00:46:01,665 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#298 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/)' 2025-01-06 00:46:01,674 [ scc.git] DEBUG [detached HEAD 842147b] merge master -Dorg -Ssuccess-only 2025-01-06 00:46:01,674 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:01,675 [ scc.repo] DEBUG ## PRs found: 2025-01-06 00:46:02,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2025-01-06 00:46:02,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2025-01-06 00:46:03,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2025-01-06 00:46:03,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2025-01-06 00:46:04,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:46:04,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-06 00:46:04,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None 2025-01-06 00:46:05,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None 2025-01-06 00:46:05,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2025-01-06 00:46:06,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2025-01-06 00:46:06,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-01-06 00:46:07,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:46:07,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-01-06 00:46:08,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:46:08,168 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-01-06 00:46:08,168 [ scc.repo] DEBUG ## Branches found: 2025-01-06 00:46:08,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-01-06 00:46:08,168 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:08,168 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:08,174 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-06 00:46:08,180 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-06 00:46:08,180 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-06 00:46:08,186 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-06 00:46:08,192 [ scc.git] DEBUG Already up to date. 2025-01-06 00:46:08,192 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2025-01-06 00:46:08,636 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-01-06 00:46:08,637 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2025-01-06 00:46:08,641 [ scc.git] DEBUG ## Unique users: [] 2025-01-06 00:46:08,642 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:08,642 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:08,647 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2025-01-06 00:46:08,654 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:08,659 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2025-01-06 00:46:08,736 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-06 00:46:08,739 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2025-01-06 00:46:08,739 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2025-01-06 00:46:08,739 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2025-01-06 00:46:08,739 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2025-01-06 00:46:08,739 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2025-01-06 00:46:08,740 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2025-01-06 00:46:08,740 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2025-01-06 00:46:08,740 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2025-01-06 00:46:08,740 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2025-01-06 00:46:08,740 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2025-01-06 00:46:08,740 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2025-01-06 00:46:08,740 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2025-01-06 00:46:08,740 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2025-01-06 00:46:08,740 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2025-01-06 00:46:08,742 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2025-01-06 00:46:08,742 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2025-01-06 00:46:08,742 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2025-01-06 00:46:08,742 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2025-01-06 00:46:08,742 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2025-01-06 00:46:08,742 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2025-01-06 00:46:08,742 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2025-01-06 00:46:08,742 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2025-01-06 00:46:08,742 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2025-01-06 00:46:08,742 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2025-01-06 00:46:08,742 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2025-01-06 00:46:08,742 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2025-01-06 00:46:08,742 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2025-01-06 00:46:08,742 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2025-01-06 00:46:08,743 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2025-01-06 00:46:08,743 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2025-01-06 00:46:08,743 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2025-01-06 00:46:08,743 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2025-01-06 00:46:08,743 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2025-01-06 00:46:08,743 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2025-01-06 00:46:08,743 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2025-01-06 00:46:08,743 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2025-01-06 00:46:08,743 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2025-01-06 00:46:08,743 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2025-01-06 00:46:08,743 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2025-01-06 00:46:08,743 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2025-01-06 00:46:08,743 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2025-01-06 00:46:08,743 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2025-01-06 00:46:08,743 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2025-01-06 00:46:08,743 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2025-01-06 00:46:08,743 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2025-01-06 00:46:08,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:08,890 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-06 00:46:08,934 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:08,935 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:08,941 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:46:08,985 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-06 00:46:08,991 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b6069d640> has no local changes 2025-01-06 00:46:08,992 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#298 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/)' 2025-01-06 00:46:09,001 [ scc.git] DEBUG [detached HEAD 168cafa] merge master -Dorg -Ssuccess-only 2025-01-06 00:46:09,002 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:09,002 [ scc.repo] DEBUG ## PRs found: 2025-01-06 00:46:09,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2025-01-06 00:46:09,339 [ scc.repo] DEBUG ## Branches found: 2025-01-06 00:46:09,339 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-01-06 00:46:09,339 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:09,339 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:09,345 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-06 00:46:09,351 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-06 00:46:09,351 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-06 00:46:09,357 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-06 00:46:09,363 [ scc.git] DEBUG Already up to date. 2025-01-06 00:46:09,364 [ scc.git] DEBUG ## Unique users: [] 2025-01-06 00:46:09,364 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:09,364 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:09,369 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-06 00:46:09,412 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:09,412 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:09,418 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:46:09,461 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-06 00:46:09,468 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b60706550> has no local changes 2025-01-06 00:46:09,468 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#298 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/)' 2025-01-06 00:46:09,478 [ scc.git] DEBUG [detached HEAD dcd2a97] merge master -Dorg -Ssuccess-only 2025-01-06 00:46:09,478 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:09,478 [ scc.repo] DEBUG ## PRs found: 2025-01-06 00:46:09,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2025-01-06 00:46:10,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20 HTTP/1.1" 200 None 2025-01-06 00:46:10,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20/comments HTTP/1.1" 200 None 2025-01-06 00:46:11,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None 2025-01-06 00:46:11,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:46:12,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-06 00:46:12,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None 2025-01-06 00:46:13,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/14c890a5b62ef9937c751230251154351debb9ea?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:46:13,274 [ scc.repo] DEBUG - PR 20 jburel 'Build' 2025-01-06 00:46:13,274 [ scc.repo] DEBUG ## Branches found: 2025-01-06 00:46:13,274 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-01-06 00:46:13,275 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:13,275 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:13,280 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-06 00:46:13,285 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-06 00:46:13,285 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-06 00:46:13,290 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-06 00:46:13,295 [ scc.git] DEBUG Already up to date. 2025-01-06 00:46:13,296 [ scc.git] DEBUG Calling 'git fetch origin pull/20/head' 2025-01-06 00:46:13,778 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2025-01-06 00:46:13,778 [ scc.git] DEBUG * branch refs/pull/20/head -> FETCH_HEAD 2025-01-06 00:46:13,783 [ scc.git] DEBUG ## Unique users: [] 2025-01-06 00:46:13,783 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:13,783 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:13,789 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14c890a5b62ef9937c751230251154351debb9ea' 2025-01-06 00:46:13,795 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:13,802 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 20 (Build) 14c890a5b62ef9937c751230251154351debb9ea' 2025-01-06 00:46:13,846 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-06 00:46:13,849 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2025-01-06 00:46:13,849 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2025-01-06 00:46:13,849 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++ 2025-01-06 00:46:13,849 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-) 2025-01-06 00:46:13,849 [ scc.git] DEBUG create mode 100755 .omeroci/app-build 2025-01-06 00:46:13,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:13,992 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-06 00:46:14,036 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:14,036 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:14,042 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:46:14,086 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-06 00:46:14,094 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b60706790> has no local changes 2025-01-06 00:46:14,094 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Merged PRs: - PR 20 jburel 'Build' Generated by OMERO-plugins-push#298 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/)' 2025-01-06 00:46:14,104 [ scc.git] DEBUG [detached HEAD 7576e5e] merge master -Dorg -Ssuccess-only 2025-01-06 00:46:14,105 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:14,105 [ scc.git] INFO Overriding base-branch from master to main 2025-01-06 00:46:14,105 [ scc.repo] DEBUG ## PRs found: 2025-01-06 00:46:14,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2025-01-06 00:46:15,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None 2025-01-06 00:46:15,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None 2025-01-06 00:46:15,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None 2025-01-06 00:46:16,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:46:17,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-06 00:46:17,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2025-01-06 00:46:17,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2025-01-06 00:46:18,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2025-01-06 00:46:18,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-01-06 00:46:19,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:46:19,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-01-06 00:46:20,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:46:20,382 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-01-06 00:46:20,385 [ scc.repo] DEBUG ## Branches found: 2025-01-06 00:46:20,386 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-01-06 00:46:20,387 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:20,388 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:20,397 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2025-01-06 00:46:20,404 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-06 00:46:20,404 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2025-01-06 00:46:20,410 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2025-01-06 00:46:20,417 [ scc.git] DEBUG Already up to date. 2025-01-06 00:46:20,417 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2025-01-06 00:46:20,796 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-01-06 00:46:20,796 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2025-01-06 00:46:20,801 [ scc.git] DEBUG ## Unique users: [] 2025-01-06 00:46:20,802 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:20,802 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:20,809 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-01-06 00:46:20,816 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:20,821 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-01-06 00:46:20,871 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2025-01-06 00:46:20,871 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2025-01-06 00:46:20,871 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-06 00:46:20,872 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-06 00:46:20,878 [ scc.git] DEBUG Calling 'git reset --hard 8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2025-01-06 00:46:20,885 [ scc.git] DEBUG HEAD is now at 8f3c313 Merge pull request #17 from jburel/build 2025-01-06 00:46:21,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:21,022 [ scc.git] DEBUG Calling 'git merge-base 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-01-06 00:46:21,029 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2025-01-06 00:46:21,035 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#298](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2025-01-06 00:46:21,041 [ scc.config] DEBUG Found github.token 2025-01-06 00:46:21,041 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2025-01-06 00:46:21,041 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-06 00:46:21,084 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:21,085 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:21,090 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:46:21,134 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-06 00:46:21,144 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b606baf40> has no local changes 2025-01-06 00:46:21,144 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#298 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/)' 2025-01-06 00:46:21,154 [ scc.git] DEBUG [detached HEAD 2726fa5] merge master -Dorg -Ssuccess-only 2025-01-06 00:46:21,154 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:21,155 [ scc.repo] DEBUG ## PRs found: 2025-01-06 00:46:21,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2025-01-06 00:46:21,429 [ scc.repo] DEBUG ## Branches found: 2025-01-06 00:46:21,429 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-01-06 00:46:21,429 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:21,429 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:21,434 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-06 00:46:21,439 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-06 00:46:21,440 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-06 00:46:21,446 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-06 00:46:21,452 [ scc.git] DEBUG Already up to date. 2025-01-06 00:46:21,452 [ scc.git] DEBUG ## Unique users: [] 2025-01-06 00:46:21,453 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:21,453 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:21,459 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-06 00:46:21,501 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:21,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:21,506 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:46:21,545 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-06 00:46:21,551 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b60676580> has no local changes 2025-01-06 00:46:21,552 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#298 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/)' 2025-01-06 00:46:21,560 [ scc.git] DEBUG [detached HEAD c4f8967] merge master -Dorg -Ssuccess-only 2025-01-06 00:46:21,561 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:21,561 [ scc.repo] DEBUG ## PRs found: 2025-01-06 00:46:21,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2025-01-06 00:46:21,866 [ scc.repo] DEBUG ## Branches found: 2025-01-06 00:46:21,866 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-01-06 00:46:21,866 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:21,866 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:21,872 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-06 00:46:21,878 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-06 00:46:21,878 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-06 00:46:21,884 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-06 00:46:21,891 [ scc.git] DEBUG Already up to date. 2025-01-06 00:46:21,891 [ scc.git] DEBUG ## Unique users: [] 2025-01-06 00:46:21,891 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:21,891 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:21,897 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-06 00:46:21,941 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:21,941 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:21,947 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:46:21,991 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-06 00:46:21,998 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b60687b80> has no local changes 2025-01-06 00:46:21,998 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#298 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/)' 2025-01-06 00:46:22,007 [ scc.git] DEBUG [detached HEAD 3668c74] merge master -Dorg -Ssuccess-only 2025-01-06 00:46:22,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:22,008 [ scc.repo] DEBUG ## PRs found: 2025-01-06 00:46:22,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2025-01-06 00:46:22,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2025-01-06 00:46:23,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2025-01-06 00:46:23,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-01-06 00:46:24,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:46:24,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-01-06 00:46:25,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:46:25,256 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2025-01-06 00:46:25,256 [ scc.repo] DEBUG ## Branches found: 2025-01-06 00:46:25,256 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-01-06 00:46:25,256 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:25,256 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:25,262 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-06 00:46:25,268 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-06 00:46:25,268 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-06 00:46:25,274 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-06 00:46:25,281 [ scc.git] DEBUG Already up to date. 2025-01-06 00:46:25,281 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2025-01-06 00:46:25,685 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2025-01-06 00:46:25,685 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2025-01-06 00:46:25,690 [ scc.git] DEBUG ## Unique users: [] 2025-01-06 00:46:25,690 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:25,690 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:25,696 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-01-06 00:46:25,704 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:25,710 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-01-06 00:46:25,743 [ scc.git] DEBUG Auto-merging Dockerfile 2025-01-06 00:46:25,743 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2025-01-06 00:46:25,743 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-06 00:46:25,744 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-06 00:46:25,751 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-01-06 00:46:25,759 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-01-06 00:46:25,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:25,902 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-01-06 00:46:25,909 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-01-06 00:46:25,916 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#298](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2025-01-06 00:46:25,922 [ scc.config] DEBUG Found github.token 2025-01-06 00:46:25,922 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2025-01-06 00:46:25,923 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-06 00:46:25,967 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:25,968 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:25,973 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:46:26,020 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-06 00:46:26,029 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b6062faf0> has no local changes 2025-01-06 00:46:26,029 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#298 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/)' 2025-01-06 00:46:26,040 [ scc.git] DEBUG [detached HEAD c9783d0] merge master -Dorg -Ssuccess-only 2025-01-06 00:46:26,040 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:26,041 [ scc.git] INFO Overriding base-branch from master to develop 2025-01-06 00:46:26,041 [ scc.repo] DEBUG ## PRs found: 2025-01-06 00:46:26,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-01-06 00:46:26,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-01-06 00:46:27,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-01-06 00:46:27,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-01-06 00:46:28,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:46:28,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-06 00:46:29,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-01-06 00:46:29,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:46:29,743 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-01-06 00:46:30,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-01-06 00:46:30,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-01-06 00:46:31,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-01-06 00:46:31,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-06 00:46:32,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-01-06 00:46:32,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-01-06 00:46:32,500 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-01-06 00:46:32,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-01-06 00:46:33,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-01-06 00:46:33,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-01-06 00:46:34,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-01-06 00:46:34,428 [ scc.repo] DEBUG ## Branches found: 2025-01-06 00:46:34,428 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-01-06 00:46:34,428 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:34,428 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:34,435 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-01-06 00:46:34,441 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-06 00:46:34,441 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-01-06 00:46:34,448 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-01-06 00:46:34,456 [ scc.git] DEBUG Already up to date. 2025-01-06 00:46:34,457 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-01-06 00:46:35,253 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-01-06 00:46:35,253 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-01-06 00:46:35,258 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-01-06 00:46:35,615 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-01-06 00:46:35,616 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-01-06 00:46:35,623 [ scc.git] DEBUG ## Unique users: [] 2025-01-06 00:46:35,623 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:35,623 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:35,631 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-01-06 00:46:35,639 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:35,645 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-01-06 00:46:35,707 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-01-06 00:46:35,708 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-06 00:46:35,708 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-06 00:46:35,715 [ scc.git] DEBUG Calling 'git reset --hard 4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-01-06 00:46:35,722 [ scc.git] DEBUG HEAD is now at 4b4c755 Bump version: 5.9.0 → 5.9.1.dev0 2025-01-06 00:46:35,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:35,866 [ scc.git] DEBUG Calling 'git merge-base 4b4c755af4ccf8a5e709548d1f8415fab48a4867 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-01-06 00:46:35,875 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-01-06 00:46:35,884 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#298](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-01-06 00:46:35,891 [ scc.config] DEBUG Found github.token 2025-01-06 00:46:35,891 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-01-06 00:46:35,891 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-01-06 00:46:35,898 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:35,903 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-01-06 00:46:35,921 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-06 00:46:35,924 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-01-06 00:46:35,924 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-01-06 00:46:36,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:36,263 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-06 00:46:36,309 [ scc.git] DEBUG Get sha1 of %s 2025-01-06 00:46:36,309 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-06 00:46:36,316 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:46:36,362 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-06 00:46:36,370 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b6062f6a0> has no local changes 2025-01-06 00:46:36,370 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#298 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/)' 2025-01-06 00:46:36,379 [ scc.git] DEBUG [detached HEAD 6e703a9] merge master -Dorg -Ssuccess-only 2025-01-06 00:46:36,379 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:36,380 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-06 00:46:36,466 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2025-01-06 00:46:36,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:36,667 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2025-01-06 00:46:36,672 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2025-01-06 00:46:37,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:37,059 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2025-01-06 00:46:37,065 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2025-01-06 00:46:37,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:37,451 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2025-01-06 00:46:37,457 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2025-01-06 00:46:37,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:37,836 [ scc.config] DEBUG Found submodule.omero-figure.url 2025-01-06 00:46:38,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:38,217 [ scc.config] DEBUG Found submodule.omero-figure.branch 2025-01-06 00:46:38,222 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2025-01-06 00:46:38,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:38,609 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2025-01-06 00:46:38,615 [ scc.config] DEBUG Found submodule.omero-gallery.url 2025-01-06 00:46:38,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:38,998 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2025-01-06 00:46:39,002 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2025-01-06 00:46:39,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:39,383 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2025-01-06 00:46:39,387 [ scc.config] DEBUG Found submodule.omero-mapr.url 2025-01-06 00:46:39,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:39,767 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2025-01-06 00:46:39,772 [ scc.config] DEBUG Found submodule.omero-metadata.url 2025-01-06 00:46:40,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:40,182 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2025-01-06 00:46:40,191 [ scc.config] DEBUG Found submodule.omero-parade.url 2025-01-06 00:46:40,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:40,572 [ scc.config] DEBUG Found submodule.omero-parade.branch 2025-01-06 00:46:40,577 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2025-01-06 00:46:40,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:40,976 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2025-01-06 00:46:40,981 [ scc.config] DEBUG Found submodule.omero-rois.url 2025-01-06 00:46:41,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:41,363 [ scc.config] DEBUG Found submodule.omero-signup.url 2025-01-06 00:46:41,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:41,756 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2025-01-06 00:46:42,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:42,159 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2025-01-06 00:46:42,165 [ scc.config] DEBUG Found submodule.omero-upload.url 2025-01-06 00:46:42,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:42,549 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2025-01-06 00:46:42,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:42,932 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2025-01-06 00:46:43,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:43,313 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2025-01-06 00:46:43,319 [ scc.config] DEBUG Found submodule.omero-weberror.url 2025-01-06 00:46:43,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:43,709 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2025-01-06 00:46:43,715 [ scc.config] DEBUG Found submodule.omero-webtest.url 2025-01-06 00:46:44,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:44,096 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2025-01-06 00:46:44,101 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2025-01-06 00:46:44,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:44,480 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2025-01-06 00:46:44,484 [ scc.config] DEBUG Found submodule.scripts.url 2025-01-06 00:46:44,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-06 00:46:44,873 [ scc.config] DEBUG Found submodule.scripts.branch 2025-01-06 00:46:44,873 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-06 00:46:44,958 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5b61877370> has local changes 2025-01-06 00:46:44,958 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Repository: ome/omero-prometheus-tools Already up to date. Repository: ome/omero-rois Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Merged PRs: - PR 20 jburel 'Build' Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#298 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/298/)' 2025-01-06 00:46:44,974 [ scc.git] DEBUG [detached HEAD 6d4ccee] merge master -Dorg -Ssuccess-only 2025-01-06 00:46:44,975 [ scc.merge] INFO Repository: ome/omero-plugins 2025-01-06 00:46:44,975 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2025-01-06 00:46:44,975 [ scc.merge] INFO Already up to date. 2025-01-06 00:46:44,975 [ scc.merge] INFO 2025-01-06 00:46:44,975 [ scc.merge] INFO Merged PRs: 2025-01-06 00:46:44,975 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-01-06 00:46:44,975 [ scc.merge] INFO 2025-01-06 00:46:44,975 [ scc.merge] INFO Repository: ome/minimal-omero-client 2025-01-06 00:46:44,975 [ scc.merge] INFO Already up to date. 2025-01-06 00:46:44,975 [ scc.merge] INFO 2025-01-06 00:46:44,975 [ scc.merge] INFO 2025-01-06 00:46:44,975 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2025-01-06 00:46:44,975 [ scc.merge] INFO Excluded PRs: 2025-01-06 00:46:44,975 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2025-01-06 00:46:44,975 [ scc.merge] INFO Already up to date. 2025-01-06 00:46:44,975 [ scc.merge] INFO 2025-01-06 00:46:44,975 [ scc.merge] INFO 2025-01-06 00:46:44,975 [ scc.merge] INFO Repository: ome/omero-cli-render 2025-01-06 00:46:44,976 [ scc.merge] INFO Excluded PRs: 2025-01-06 00:46:44,976 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2025-01-06 00:46:44,976 [ scc.merge] INFO Already up to date. 2025-01-06 00:46:44,976 [ scc.merge] INFO 2025-01-06 00:46:44,976 [ scc.merge] INFO Merged PRs: 2025-01-06 00:46:44,976 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2025-01-06 00:46:44,976 [ scc.merge] INFO 2025-01-06 00:46:44,976 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2025-01-06 00:46:44,976 [ scc.merge] INFO Excluded PRs: 2025-01-06 00:46:44,976 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-01-06 00:46:44,976 [ scc.merge] INFO Already up to date. 2025-01-06 00:46:44,976 [ scc.merge] INFO 2025-01-06 00:46:44,976 [ scc.merge] INFO Merged PRs: 2025-01-06 00:46:44,976 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2025-01-06 00:46:44,976 [ scc.merge] INFO 2025-01-06 00:46:44,976 [ scc.merge] INFO Conflicting PRs (not included): 2025-01-06 00:46:44,976 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2025-01-06 00:46:44,976 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2025-01-06 00:46:44,976 [ scc.merge] INFO 2025-01-06 00:46:44,976 [ scc.merge] INFO Repository: ome/omero-figure 2025-01-06 00:46:44,976 [ scc.merge] INFO Excluded PRs: 2025-01-06 00:46:44,976 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) 2025-01-06 00:46:44,976 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' (user: Rdornier) 2025-01-06 00:46:44,977 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2025-01-06 00:46:44,977 [ scc.merge] INFO Already up to date. 2025-01-06 00:46:44,977 [ scc.merge] INFO 2025-01-06 00:46:44,977 [ scc.merge] INFO 2025-01-06 00:46:44,977 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2025-01-06 00:46:44,977 [ scc.merge] INFO Already up to date. 2025-01-06 00:46:44,977 [ scc.merge] INFO 2025-01-06 00:46:44,977 [ scc.merge] INFO Merged PRs: 2025-01-06 00:46:44,977 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2025-01-06 00:46:44,977 [ scc.merge] INFO 2025-01-06 00:46:44,977 [ scc.merge] INFO Repository: ome/omero-gallery 2025-01-06 00:46:44,977 [ scc.merge] INFO Already up to date. 2025-01-06 00:46:44,977 [ scc.merge] INFO 2025-01-06 00:46:44,977 [ scc.merge] INFO Merged PRs: 2025-01-06 00:46:44,977 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-01-06 00:46:44,977 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-01-06 00:46:44,977 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-01-06 00:46:44,977 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-01-06 00:46:44,977 [ scc.merge] INFO 2025-01-06 00:46:44,977 [ scc.merge] INFO Conflicting PRs (not included): 2025-01-06 00:46:44,977 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-01-06 00:46:44,977 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-01-06 00:46:44,977 [ scc.merge] INFO 2025-01-06 00:46:44,977 [ scc.merge] INFO Repository: ome/omero-iviewer 2025-01-06 00:46:44,978 [ scc.merge] INFO Excluded PRs: 2025-01-06 00:46:44,978 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2025-01-06 00:46:44,978 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2025-01-06 00:46:44,978 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2025-01-06 00:46:44,978 [ scc.merge] INFO Already up to date. 2025-01-06 00:46:44,978 [ scc.merge] INFO 2025-01-06 00:46:44,978 [ scc.merge] INFO Merged PRs: 2025-01-06 00:46:44,978 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2025-01-06 00:46:44,978 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2025-01-06 00:46:44,978 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2025-01-06 00:46:44,978 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-01-06 00:46:44,978 [ scc.merge] INFO 2025-01-06 00:46:44,978 [ scc.merge] INFO Repository: ome/omero-mapr 2025-01-06 00:46:44,978 [ scc.merge] INFO Excluded PRs: 2025-01-06 00:46:44,978 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2025-01-06 00:46:44,978 [ scc.merge] INFO Already up to date. 2025-01-06 00:46:44,978 [ scc.merge] INFO 2025-01-06 00:46:44,978 [ scc.merge] INFO Merged PRs: 2025-01-06 00:46:44,978 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2025-01-06 00:46:44,978 [ scc.merge] INFO 2025-01-06 00:46:44,978 [ scc.merge] INFO Repository: ome/omero-metadata 2025-01-06 00:46:44,979 [ scc.merge] INFO Already up to date. 2025-01-06 00:46:44,979 [ scc.merge] INFO 2025-01-06 00:46:44,979 [ scc.merge] INFO Conflicting PRs (not included): 2025-01-06 00:46:44,979 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-01-06 00:46:44,979 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-01-06 00:46:44,979 [ scc.merge] INFO 2025-01-06 00:46:44,979 [ scc.merge] INFO Repository: ome/omero-parade 2025-01-06 00:46:44,979 [ scc.merge] INFO Excluded PRs: 2025-01-06 00:46:44,979 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2025-01-06 00:46:44,979 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2025-01-06 00:46:44,979 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2025-01-06 00:46:44,979 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2025-01-06 00:46:44,979 [ scc.merge] INFO Already up to date. 2025-01-06 00:46:44,979 [ scc.merge] INFO 2025-01-06 00:46:44,979 [ scc.merge] INFO 2025-01-06 00:46:44,979 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2025-01-06 00:46:44,979 [ scc.merge] INFO Already up to date. 2025-01-06 00:46:44,979 [ scc.merge] INFO 2025-01-06 00:46:44,979 [ scc.merge] INFO 2025-01-06 00:46:44,979 [ scc.merge] INFO Repository: ome/omero-rois 2025-01-06 00:46:44,979 [ scc.merge] INFO Already up to date. 2025-01-06 00:46:44,979 [ scc.merge] INFO 2025-01-06 00:46:44,979 [ scc.merge] INFO Merged PRs: 2025-01-06 00:46:44,979 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2025-01-06 00:46:44,980 [ scc.merge] INFO 2025-01-06 00:46:44,980 [ scc.merge] INFO Repository: ome/omero-signup 2025-01-06 00:46:44,980 [ scc.merge] INFO Already up to date. 2025-01-06 00:46:44,980 [ scc.merge] INFO 2025-01-06 00:46:44,980 [ scc.merge] INFO Conflicting PRs (not included): 2025-01-06 00:46:44,980 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2025-01-06 00:46:44,980 [ scc.merge] INFO 2025-01-06 00:46:44,980 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2025-01-06 00:46:44,980 [ scc.merge] INFO Excluded PRs: 2025-01-06 00:46:44,980 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2025-01-06 00:46:44,980 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2025-01-06 00:46:44,980 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) 2025-01-06 00:46:44,980 [ scc.merge] INFO Already up to date. 2025-01-06 00:46:44,980 [ scc.merge] INFO 2025-01-06 00:46:44,980 [ scc.merge] INFO Merged PRs: 2025-01-06 00:46:44,980 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-01-06 00:46:44,980 [ scc.merge] INFO 2025-01-06 00:46:44,980 [ scc.merge] INFO Repository: ome/omero-upload 2025-01-06 00:46:44,980 [ scc.merge] INFO Already up to date. 2025-01-06 00:46:44,980 [ scc.merge] INFO 2025-01-06 00:46:44,980 [ scc.merge] INFO 2025-01-06 00:46:44,980 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2025-01-06 00:46:44,980 [ scc.merge] INFO Already up to date. 2025-01-06 00:46:44,980 [ scc.merge] INFO 2025-01-06 00:46:44,981 [ scc.merge] INFO Merged PRs: 2025-01-06 00:46:44,981 [ scc.merge] INFO - PR 20 jburel 'Build' 2025-01-06 00:46:44,981 [ scc.merge] INFO 2025-01-06 00:46:44,981 [ scc.merge] INFO Repository: ome/omero-web-zarr 2025-01-06 00:46:44,981 [ scc.merge] INFO Excluded PRs: 2025-01-06 00:46:44,981 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure) 2025-01-06 00:46:44,981 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2025-01-06 00:46:44,981 [ scc.merge] INFO Already up to date. 2025-01-06 00:46:44,981 [ scc.merge] INFO 2025-01-06 00:46:44,981 [ scc.merge] INFO Conflicting PRs (not included): 2025-01-06 00:46:44,981 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-01-06 00:46:44,981 [ scc.merge] INFO 2025-01-06 00:46:44,981 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2025-01-06 00:46:44,981 [ scc.merge] INFO Already up to date. 2025-01-06 00:46:44,981 [ scc.merge] INFO 2025-01-06 00:46:44,981 [ scc.merge] INFO 2025-01-06 00:46:44,981 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2025-01-06 00:46:44,981 [ scc.merge] INFO Already up to date. 2025-01-06 00:46:44,981 [ scc.merge] INFO 2025-01-06 00:46:44,981 [ scc.merge] INFO 2025-01-06 00:46:44,981 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2025-01-06 00:46:44,981 [ scc.merge] INFO Already up to date. 2025-01-06 00:46:44,981 [ scc.merge] INFO 2025-01-06 00:46:44,981 [ scc.merge] INFO Conflicting PRs (not included): 2025-01-06 00:46:44,982 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2025-01-06 00:46:44,982 [ scc.merge] INFO 2025-01-06 00:46:44,982 [ scc.merge] INFO Repository: ome/scripts 2025-01-06 00:46:44,982 [ scc.merge] INFO Excluded PRs: 2025-01-06 00:46:44,982 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-01-06 00:46:44,982 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-01-06 00:46:44,982 [ scc.merge] INFO Already up to date. 2025-01-06 00:46:44,982 [ scc.merge] INFO 2025-01-06 00:46:44,982 [ scc.merge] INFO Merged PRs: 2025-01-06 00:46:44,982 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-01-06 00:46:44,982 [ scc.merge] INFO 2025-01-06 00:46:44,982 [ scc.merge] INFO Conflicting PRs (not included): 2025-01-06 00:46:44,982 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-01-06 00:46:44,982 [ scc.merge] INFO 2025-01-06 00:46:44,982 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-01-06 00:46:44,982 [ scc.git] DEBUG Calling 'git remote' 2025-01-06 00:46:44,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-01-06 00:46:44,990 [ scc.git] DEBUG Calling 'git remote' 2025-01-06 00:46:44,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:44,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-01-06 00:46:44,995 [ scc.git] DEBUG Calling 'git remote' 2025-01-06 00:46:45,001 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:45,001 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-01-06 00:46:45,001 [ scc.git] DEBUG Calling 'git remote' 2025-01-06 00:46:45,007 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:45,007 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-01-06 00:46:45,007 [ scc.git] DEBUG Calling 'git remote' 2025-01-06 00:46:45,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:45,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-01-06 00:46:45,013 [ scc.git] DEBUG Calling 'git remote' 2025-01-06 00:46:45,019 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:45,019 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-01-06 00:46:45,019 [ scc.git] DEBUG Calling 'git remote' 2025-01-06 00:46:45,024 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:45,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-01-06 00:46:45,025 [ scc.git] DEBUG Calling 'git remote' 2025-01-06 00:46:45,029 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:45,030 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-01-06 00:46:45,030 [ scc.git] DEBUG Calling 'git remote' 2025-01-06 00:46:45,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:45,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-01-06 00:46:45,037 [ scc.git] DEBUG Calling 'git remote' 2025-01-06 00:46:45,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:45,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-01-06 00:46:45,043 [ scc.git] DEBUG Calling 'git remote' 2025-01-06 00:46:45,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:45,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-01-06 00:46:45,048 [ scc.git] DEBUG Calling 'git remote' 2025-01-06 00:46:45,053 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:45,053 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-01-06 00:46:45,054 [ scc.git] DEBUG Calling 'git remote' 2025-01-06 00:46:45,059 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:45,059 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-01-06 00:46:45,059 [ scc.git] DEBUG Calling 'git remote' 2025-01-06 00:46:45,071 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:45,071 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-01-06 00:46:45,071 [ scc.git] DEBUG Calling 'git remote' 2025-01-06 00:46:45,080 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:45,080 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-01-06 00:46:45,080 [ scc.git] DEBUG Calling 'git remote' 2025-01-06 00:46:45,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:45,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-01-06 00:46:45,086 [ scc.git] DEBUG Calling 'git remote' 2025-01-06 00:46:45,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:45,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-01-06 00:46:45,092 [ scc.git] DEBUG Calling 'git remote' 2025-01-06 00:46:45,097 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:45,097 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-01-06 00:46:45,097 [ scc.git] DEBUG Calling 'git remote' 2025-01-06 00:46:45,104 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:45,104 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-01-06 00:46:45,104 [ scc.git] DEBUG Calling 'git remote' 2025-01-06 00:46:45,110 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:45,110 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-01-06 00:46:45,110 [ scc.git] DEBUG Calling 'git remote' 2025-01-06 00:46:45,115 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:45,116 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-01-06 00:46:45,116 [ scc.git] DEBUG Calling 'git remote' 2025-01-06 00:46:45,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-06 00:46:45,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-01-06 00:46:45,121 [ scc.git] DEBUG Calling 'git remote' 2025-01-06 00:46:45,125 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: 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or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 7d68688] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from fb316a7e nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from b4102d4 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD f2a8b46] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-01-06 00:47:32,320 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-01-06 00:47:41,316 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-01-06 00:47:43,608 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-01-06 00:47:48,089 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-01-06 00:48:27,281 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS