Skipping 15 KB..
Full LogCopied 1 artifact from "OMERO-build" build number 35
01:07:07 Copied 5 artifacts from "OMERO-python-superbuild-build" build number 35
01:07:07 Copied 2 artifacts from "OMERO-build-build" build number 36
01:07:07 [OMERO-test-integration] $ /bin/bash -xe /tmp/jenkins8094196698774946606.sh
01:07:07 + source /home/settings.env
01:07:07 ++ OMERO_DB_HOST=pg
01:07:07 ++ OMERO_DB_USER=postgres
01:07:07 ++ OMERO_DB_PASS=
01:07:07 ++ OMERO_ROOT_PASS=omero
01:07:07 ++ OMERO_DATA_DIR=/OMERO
01:07:07 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
01:07:07 + export ZIP_FILE=/home/omero/workspace/OMERO-test-integration/omero-blitz-VERSION-python.zip
01:07:07 + ZIP_FILE=/home/omero/workspace/OMERO-test-integration/omero-blitz-VERSION-python.zip
01:07:07 + export VERSION_PROPERTIES=/home/omero/workspace/OMERO-test-integration/version.properties
01:07:07 + VERSION_PROPERTIES=/home/omero/workspace/OMERO-test-integration/version.properties
01:07:07 + OMERO_DB_NAME=OMERO-test-integration
01:07:07 + OMERO_DATA_DIR=/home/omero/workspace/OMERO-test-integration/data
01:07:07 + mkdir -p /home/omero/workspace/OMERO-test-integration/data
01:07:07 + SRC=/home/omero/workspace/OMERO-test-integration/src
01:07:07 ++ ls openmicroscopy-5.6.3-453-fe62e979b0-ice36.zip
01:07:07 + ZIP_SRC=openmicroscopy-5.6.3-453-fe62e979b0-ice36.zip
01:07:07 + unzip openmicroscopy-5.6.3-453-fe62e979b0-ice36.zip
01:07:07 Archive: openmicroscopy-5.6.3-453-fe62e979b0-ice36.zip
01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/.classpath-template
01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/.github/
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/.github/Pull_Request_Template.md
01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/.github/workflows/
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01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/
01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/antlib/
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/antlib/.classpath
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/antlib/.project
01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/antlib/resources/
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/antlib/resources/excludebugs.xml
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01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/antlib/resources/version.xml
01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/antlib/scripts/
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/antlib/scripts/parse_version
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01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tests/
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tests/build.xml
01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tests/ui/
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01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tests/ui/plugins/
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tests/ui/plugins/robot.py
01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tests/ui/resources/
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tests/ui/resources/robot.template
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01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tests/ui/resources/web/annotation.txt
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01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tests/ui/robot_setup.sh
01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tests/ui/testcases/
01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tests/ui/testcases/web/
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tests/ui/testcases/web/annotate_test.robot
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01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tests/ui/testcases/web/webadmin_login.robot
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tests/ui/testcases/web/webadmin_user_settings.robot
01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/
01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/CMakeLists.txt
01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/cmake/
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/cmake/CompilerChecks.cmake
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/cmake/FindIce.cmake
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01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/cmake/Version.cmake
01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/
01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/CHANGES
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01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/CONTRIBUTORS
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01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/README
01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/cmake/
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/cmake/internal_utils.cmake
01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/
01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-death-test.h
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-message.h
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-param-test.h
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-param-test.h.pump
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-printers.h
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-spi.h
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-test-part.h
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-typed-test.h
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01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest_pred_impl.h
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest_prod.h
01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-death-test-internal.h
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-filepath.h
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-internal.h
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-linked_ptr.h
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-param-util-generated.h
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-param-util-generated.h.pump
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01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-port.h
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-string.h
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-tuple.h
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-tuple.h.pump
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-type-util.h
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-type-util.h.pump
01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/prime_tables.h
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01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/scripts/
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01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/scripts/test/
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/scripts/test/Makefile
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01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-all.cc
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01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-death-test_ex_test.cc
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01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-linked_ptr_test.cc
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01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-message_test.cc
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-options_test.cc
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-param-test2_test.cc
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01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-typed-test2_test.cc
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01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_all_test.cc
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_break_on_failure_unittest.py
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_break_on_failure_unittest_.cc
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_catch_exceptions_test.py
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01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_no_test_unittest.cc
01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_output_test.py
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01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_output_test_golden_lin.txt
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01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/src/README.h
01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/src/omero/
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01:07:07 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroPy/test/integration/metadata/test_pydict_text.py
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01:07:07 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroPy/test/integration/scriptstest/
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01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO3A__4/OMERO3A__3.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO3A__4/OMERO3__5.sql
01:07:08 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO3A__5/
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO3A__5/OMERO3A__4.sql
01:07:08 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO3A__6/
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO3A__6/OMERO3A__5.sql
01:07:08 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO3A__7/
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO3A__7/OMERO3A__6.sql
01:07:08 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO3A__8/
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO3A__8/OMERO3A__6.sql
01:07:08 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO3A__9/
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO3A__9/OMERO3A__8.sql
01:07:08 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO3__4/
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO3__4/OMERO3__1.sql
01:07:08 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO3__5/
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO3__5/OMERO3__4.sql
01:07:08 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO3__6/
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO3__6/OMERO3__5.sql
01:07:08 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO3__7/
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO3__7/OMERO3__6.sql
01:07:08 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO4.1__0/
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO4.1__0/OMERO4__0.sql
01:07:08 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO4.2__0/
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO4.2__0/OMERO4.1__0.sql
01:07:08 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO4.2__0/t/
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO4.2__0/t/OMERO4.1__0.py
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO4.2__0/t/OMERO4.1__0.test
01:07:08 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO4.3__0/
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO4.3__0/OMERO4.2__0.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO4.3__0/omero-4.2-data-fix.sql
01:07:08 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO4.4__0/
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO4.4__0/OMERO4.1__0.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO4.4__0/OMERO4.3__0.sql
01:07:08 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO4__0/
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO4__0/OMERO3A__11.sql
01:07:08 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.0__0/
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-fix.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-list.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.0__0/OMERO4.4__0.sql
01:07:08 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.1__1/
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.1__1/OMERO5.0__0.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.1__1/OMERO5.1__0.sql
01:07:08 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.2__0/
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.2__0/OMERO5.1__1.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql
01:07:08 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.3__0/
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.3__0/OMERO5.2__0.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.3__0/delete-ns-orphans.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.3__0/reverse_shape_color_argb_to_rgba.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql
01:07:08 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.4DEV__1/
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql
01:07:08 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.4DEV__2/
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql
01:07:08 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.4DEV__3/
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql
01:07:08 creating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.4__0/
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.4__0/OMERO5.3__0.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.4__0/OMERO5.3__1.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.4__0/psql-footer.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.4__0/psql-header.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.4__0/schema.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/sql/psql/OMERO5.4__0/views.sql
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/test.xml
01:07:08 inflating: openmicroscopy-5.6.3-453-fe62e979b0-ice36/update_dependencies.sh
01:07:08 extracting: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/antlib/resources/gitversion.xml
01:07:08 extracting: openmicroscopy-5.6.3-453-fe62e979b0-ice36/components/tools/OmeroCpp/cmake/GitVersion.cmake
01:07:08 + rm -f openmicroscopy-5.6.3-453-fe62e979b0-ice36.zip
01:07:08 + mv /home/omero/workspace/OMERO-test-integration/openmicroscopy-5.6.3-453-fe62e979b0-ice36 /home/omero/workspace/OMERO-test-integration/src
01:07:08 + source /home/omero/workspace/OMERO-test-integration/.venv3/bin/activate
01:07:08 ++ deactivate nondestructive
01:07:08 ++ '[' -n '' ']'
01:07:08 ++ '[' -n '' ']'
01:07:08 ++ '[' -n /bin/bash -o -n '' ']'
01:07:08 ++ hash -r
01:07:08 ++ '[' -n '' ']'
01:07:08 ++ unset VIRTUAL_ENV
01:07:08 ++ '[' '!' nondestructive = nondestructive ']'
01:07:08 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-test-integration/.venv3
01:07:08 ++ export VIRTUAL_ENV
01:07:08 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:07:08 ++ PATH=/home/omero/workspace/OMERO-test-integration/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:07:08 ++ export PATH
01:07:08 ++ '[' -n '' ']'
01:07:08 ++ '[' -z '' ']'
01:07:08 ++ _OLD_VIRTUAL_PS1=
01:07:08 ++ PS1='(.venv3) '
01:07:08 ++ export PS1
01:07:08 ++ '[' -n /bin/bash -o -n '' ']'
01:07:08 ++ hash -r
01:07:08 + for x in *.tar.gz
01:07:08 + pip install -U omero_dropbox-5.6.3.dev0.tar.gz
01:07:08 Processing ./omero_dropbox-5.6.3.dev0.tar.gz
01:07:08 Installing build dependencies: started
01:07:11 Installing build dependencies: finished with status 'done'
01:07:11 Getting requirements to build wheel: started
01:07:11 Getting requirements to build wheel: finished with status 'done'
01:07:11 Installing backend dependencies: started
01:07:12 Installing backend dependencies: finished with status 'done'
01:07:12 Preparing metadata (pyproject.toml): started
01:07:13 Preparing metadata (pyproject.toml): finished with status 'done'
01:07:13 Requirement already satisfied: omero-py in ./.venv3/lib/python3.9/site-packages (from omero-dropbox==5.6.3.dev0) (5.19.1)
01:07:13 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (1.26.18)
01:07:13 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (1.4.4)
01:07:13 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (1.0.0)
01:07:13 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (1.26.4)
01:07:13 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (10.3.0)
01:07:13 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (6.0.1)
01:07:13 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (3.6.5)
01:07:13 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (2.31.0)
01:07:13 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (2.8.2)
01:07:13 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py->omero-dropbox==5.6.3.dev0) (3.3.2)
01:07:13 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py->omero-dropbox==5.6.3.dev0) (3.7)
01:07:13 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py->omero-dropbox==5.6.3.dev0) (2024.2.2)
01:07:13 Building wheels for collected packages: omero-dropbox
01:07:13 Building wheel for omero-dropbox (pyproject.toml): started
01:07:13 Building wheel for omero-dropbox (pyproject.toml): finished with status 'done'
01:07:13 Created wheel for omero-dropbox: filename=omero_dropbox-5.6.3.dev0-py3-none-any.whl size=49057 sha256=5e7847a1a66481157398dde319a7affc891489cf0986591f422bc2ca75747b8b
01:07:13 Stored in directory: /home/omero/.cache/pip/wheels/0e/9f/cd/9f0845134a17c82705f76b8cd2ec0b65d2fdea79617b2d062f
01:07:13 Successfully built omero-dropbox
01:07:13 Installing collected packages: omero-dropbox
01:07:13 Successfully installed omero-dropbox-5.6.3.dev0
01:07:13 + for x in *.tar.gz
01:07:13 + pip install -U omero_marshal-0.9.1.dev0.tar.gz
01:07:14 Processing ./omero_marshal-0.9.1.dev0.tar.gz
01:07:14 Installing build dependencies: started
01:07:16 Installing build dependencies: finished with status 'done'
01:07:16 Getting requirements to build wheel: started
01:07:16 Getting requirements to build wheel: finished with status 'done'
01:07:16 Installing backend dependencies: started
01:07:17 Installing backend dependencies: finished with status 'done'
01:07:17 Preparing metadata (pyproject.toml): started
01:07:17 Preparing metadata (pyproject.toml): finished with status 'done'
01:07:17 Building wheels for collected packages: omero_marshal
01:07:17 Building wheel for omero_marshal (pyproject.toml): started
01:07:18 Building wheel for omero_marshal (pyproject.toml): finished with status 'done'
01:07:18 Created wheel for omero_marshal: filename=omero_marshal-0.9.1.dev0-py3-none-any.whl size=88031 sha256=1364646a83b2faf6983afdda898b884b13ff6ff6a663f8b15dc34480922500fb
01:07:18 Stored in directory: /home/omero/.cache/pip/wheels/1a/3a/cd/b39392f5c8ba80a35bab4a0f80f93c7c4729cce6868750f4f3
01:07:18 Successfully built omero_marshal
01:07:18 Installing collected packages: omero_marshal
01:07:18 Attempting uninstall: omero_marshal
01:07:18 Found existing installation: omero-marshal 0.9.0
01:07:18 Uninstalling omero-marshal-0.9.0:
01:07:18 Successfully uninstalled omero-marshal-0.9.0
01:07:18 Successfully installed omero_marshal-0.9.1.dev0
01:07:18 + for x in *.tar.gz
01:07:18 + pip install -U omero_py-5.19.2.dev0.tar.gz
01:07:19 Processing ./omero_py-5.19.2.dev0.tar.gz
01:07:19 Installing build dependencies: started
01:07:22 Installing build dependencies: finished with status 'done'
01:07:22 Getting requirements to build wheel: started
01:07:22 Getting requirements to build wheel: finished with status 'done'
01:07:22 Installing backend dependencies: started
01:07:23 Installing backend dependencies: finished with status 'done'
01:07:23 Preparing metadata (pyproject.toml): started
01:07:23 Preparing metadata (pyproject.toml): finished with status 'done'
01:07:23 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.2.dev0) (1.26.18)
01:07:23 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.2.dev0) (1.4.4)
01:07:23 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.2.dev0) (1.0.0)
01:07:23 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.2.dev0) (1.26.4)
01:07:23 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.2.dev0) (10.3.0)
01:07:23 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.2.dev0) (6.0.1)
01:07:23 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.2.dev0) (3.6.5)
01:07:23 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.2.dev0) (2.31.0)
01:07:23 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.2.dev0) (2.8.2)
01:07:23 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py==5.19.2.dev0) (3.3.2)
01:07:23 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py==5.19.2.dev0) (3.7)
01:07:23 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py==5.19.2.dev0) (2024.2.2)
01:07:23 Building wheels for collected packages: omero-py
01:07:23 Building wheel for omero-py (pyproject.toml): started
01:07:24 Building wheel for omero-py (pyproject.toml): finished with status 'done'
01:07:24 Created wheel for omero-py: filename=omero_py-5.19.2.dev0-py3-none-any.whl size=2782056 sha256=e3656f691b84d4d2269d01da86ef01de7ed2f0f587285aa4cd25c10d4cb16214
01:07:24 Stored in directory: /home/omero/.cache/pip/wheels/b9/4d/2a/1d8fce2912eb7afdc37b5132d8d9c671cdca19e8cdf2b04b61
01:07:24 Successfully built omero-py
01:07:25 Installing collected packages: omero-py
01:07:25 Attempting uninstall: omero-py
01:07:25 Found existing installation: omero-py 5.19.1
01:07:25 Uninstalling omero-py-5.19.1:
01:07:25 Successfully uninstalled omero-py-5.19.1
01:07:28 Successfully installed omero-py-5.19.2.dev0
01:07:28 + for x in *.tar.gz
01:07:28 + pip install -U omero_scripts-5.8.1.dev0.tar.gz
01:07:28 Processing ./omero_scripts-5.8.1.dev0.tar.gz
01:07:28 Installing build dependencies: started
01:07:30 Installing build dependencies: finished with status 'done'
01:07:30 Getting requirements to build wheel: started
01:07:30 Getting requirements to build wheel: finished with status 'done'
01:07:30 Installing backend dependencies: started
01:07:32 Installing backend dependencies: finished with status 'done'
01:07:32 Preparing metadata (pyproject.toml): started
01:07:32 Preparing metadata (pyproject.toml): finished with status 'done'
01:07:32 Building wheels for collected packages: omero-scripts
01:07:32 Building wheel for omero-scripts (pyproject.toml): started
01:07:32 Building wheel for omero-scripts (pyproject.toml): finished with status 'done'
01:07:32 Created wheel for omero-scripts: filename=omero_scripts-5.8.1.dev0-py3-none-any.whl size=116570 sha256=ad81dcb6b30037df228d7dd8f2d63761456d3ccb8d5b561e684134c972370908
01:07:32 Stored in directory: /home/omero/.cache/pip/wheels/82/ca/6b/db0c26bcdcd10598b90237fc0cc4f0f6d40f67cb33e9c7924a
01:07:32 Successfully built omero-scripts
01:07:32 Installing collected packages: omero-scripts
01:07:32 Successfully installed omero-scripts-5.8.1.dev0
01:07:33 + for x in *.tar.gz
01:07:33 + pip install -U omero_web-5.25.1.dev0.tar.gz
01:07:33 Processing ./omero_web-5.25.1.dev0.tar.gz
01:07:33 Installing build dependencies: started
01:07:35 Installing build dependencies: finished with status 'done'
01:07:35 Getting requirements to build wheel: started
01:07:36 Getting requirements to build wheel: finished with status 'done'
01:07:36 Installing backend dependencies: started
01:07:37 Installing backend dependencies: finished with status 'done'
01:07:37 Preparing metadata (pyproject.toml): started
01:07:37 Preparing metadata (pyproject.toml): finished with status 'done'
01:07:37 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.25.1.dev0) (5.19.2.dev0)
01:07:37 Requirement already satisfied: concurrent-log-handler>=0.9.20 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.25.1.dev0) (0.9.25)
01:07:37 Requirement already satisfied: Django<4.3,>=4.2.3 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.25.1.dev0) (4.2.11)
01:07:37 Requirement already satisfied: django-pipeline==2.1.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.25.1.dev0) (2.1.0)
01:07:37 Requirement already satisfied: django-cors-headers==3.7.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.25.1.dev0) (3.7.0)
01:07:37 Collecting django-csp (from omero-web==5.25.1.dev0)
01:07:37 Using cached django_csp-3.8-py3-none-any.whl.metadata (2.7 kB)
01:07:37 Requirement already satisfied: whitenoise>=5.3.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.25.1.dev0) (6.6.0)
01:07:37 Requirement already satisfied: gunicorn>=19.3 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.25.1.dev0) (21.2.0)
01:07:37 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.25.1.dev0) (0.9.1.dev0)
01:07:37 Requirement already satisfied: Pillow in ./.venv3/lib/python3.9/site-packages (from omero-web==5.25.1.dev0) (10.3.0)
01:07:37 Requirement already satisfied: pytz in ./.venv3/lib/python3.9/site-packages (from omero-web==5.25.1.dev0) (2024.1)
01:07:37 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-web==5.25.1.dev0) (2.8.2)
01:07:37 Requirement already satisfied: packaging in ./.venv3/lib/python3.9/site-packages (from omero-web==5.25.1.dev0) (24.0)
01:07:37 Requirement already satisfied: asgiref<4,>=3.6.0 in ./.venv3/lib/python3.9/site-packages (from Django<4.3,>=4.2.3->omero-web==5.25.1.dev0) (3.8.1)
01:07:37 Requirement already satisfied: sqlparse>=0.3.1 in ./.venv3/lib/python3.9/site-packages (from Django<4.3,>=4.2.3->omero-web==5.25.1.dev0) (0.5.0)
01:07:37 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.25.1.dev0) (1.26.18)
01:07:37 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.25.1.dev0) (1.4.4)
01:07:37 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.25.1.dev0) (1.0.0)
01:07:37 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.25.1.dev0) (1.26.4)
01:07:37 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.25.1.dev0) (6.0.1)
01:07:37 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.25.1.dev0) (3.6.5)
01:07:37 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.25.1.dev0) (2.31.0)
01:07:37 Requirement already satisfied: typing-extensions>=4 in ./.venv3/lib/python3.9/site-packages (from asgiref<4,>=3.6.0->Django<4.3,>=4.2.3->omero-web==5.25.1.dev0) (4.11.0)
01:07:37 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.19.0->omero-web==5.25.1.dev0) (3.3.2)
01:07:37 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.19.0->omero-web==5.25.1.dev0) (3.7)
01:07:37 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.19.0->omero-web==5.25.1.dev0) (2024.2.2)
01:07:37 Using cached django_csp-3.8-py3-none-any.whl (17 kB)
01:07:37 Building wheels for collected packages: omero-web
01:07:37 Building wheel for omero-web (pyproject.toml): started
01:07:39 Building wheel for omero-web (pyproject.toml): finished with status 'done'
01:07:39 Created wheel for omero-web: filename=omero_web-5.25.1.dev0-py3-none-any.whl size=2772197 sha256=4071723286f2bee64ecd832261b2eb2a560d50ad9079c1a5e9cb222ae1127c26
01:07:39 Stored in directory: /home/omero/.cache/pip/wheels/2e/3f/6f/e86209d4894abd856bd2c2af7e2f64ae38a047910452b13a1a
01:07:39 Successfully built omero-web
01:07:39 Installing collected packages: django-csp, omero-web
01:07:39 Attempting uninstall: omero-web
01:07:39 Found existing installation: omero-web 5.25.0
01:07:39 Uninstalling omero-web-5.25.0:
01:07:39 Successfully uninstalled omero-web-5.25.0
01:07:40 Successfully installed django-csp-3.8 omero-web-5.25.1.dev0
01:07:40 + pip install omero-certificates
01:07:41 Collecting omero-certificates
01:07:41 Using cached omero_certificates-0.3.2-py3-none-any.whl.metadata (3.7 kB)
01:07:41 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib/python3.9/site-packages (from omero-certificates) (5.19.2.dev0)
01:07:41 Collecting distro==1.8.0 (from omero-certificates)
01:07:41 Using cached distro-1.8.0-py3-none-any.whl.metadata (6.9 kB)
01:07:41 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.26.18)
01:07:41 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.4.4)
01:07:41 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.0.0)
01:07:41 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.26.4)
01:07:41 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (10.3.0)
01:07:41 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (6.0.1)
01:07:41 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (3.6.5)
01:07:41 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (2.31.0)
01:07:41 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (2.8.2)
01:07:41 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.3.2)
01:07:41 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.7)
01:07:41 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2024.2.2)
01:07:41 Using cached omero_certificates-0.3.2-py3-none-any.whl (13 kB)
01:07:41 Using cached distro-1.8.0-py3-none-any.whl (20 kB)
01:07:41 Installing collected packages: distro, omero-certificates
01:07:41 Successfully installed distro-1.8.0 omero-certificates-0.3.2
01:07:42 + for x in omero-cli-duplicate
01:07:42 + pip install git+https://github.com/snoopycrimecop/omero-cli-duplicate.git@merge_ci#egg=omero-cli-duplicate
01:07:42 Collecting omero-cli-duplicate
01:07:42 Cloning https://github.com/snoopycrimecop/omero-cli-duplicate.git (to revision merge_ci) to /tmp/pip-install-4kemf2rc/omero-cli-duplicate_98e7495704034098852a3ee6207d59db
01:07:42 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-duplicate.git /tmp/pip-install-4kemf2rc/omero-cli-duplicate_98e7495704034098852a3ee6207d59db
01:07:43 Running command git checkout -b merge_ci --track origin/merge_ci
01:07:44 Switched to a new branch 'merge_ci'
01:07:44 branch 'merge_ci' set up to track 'origin/merge_ci'.
01:07:44 Resolved https://github.com/snoopycrimecop/omero-cli-duplicate.git to commit 19eb2d80b79f81d5510eda4c815cfb38352e1d52
01:07:44 Installing build dependencies: started
01:07:46 Installing build dependencies: finished with status 'done'
01:07:46 Getting requirements to build wheel: started
01:07:46 Getting requirements to build wheel: finished with status 'done'
01:07:46 Installing backend dependencies: started
01:07:47 Installing backend dependencies: finished with status 'done'
01:07:47 Preparing metadata (pyproject.toml): started
01:07:47 Preparing metadata (pyproject.toml): finished with status 'done'
01:07:47 Requirement already satisfied: omero-py>=5.8 in ./.venv3/lib/python3.9/site-packages (from omero-cli-duplicate) (5.19.2.dev0)
01:07:47 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.26.18)
01:07:47 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.4.4)
01:07:47 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.0.0)
01:07:47 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.26.4)
01:07:47 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (10.3.0)
01:07:47 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (6.0.1)
01:07:47 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.6.5)
01:07:47 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.31.0)
01:07:47 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.8.2)
01:07:47 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.3.2)
01:07:47 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.7)
01:07:47 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2024.2.2)
01:07:47 Building wheels for collected packages: omero-cli-duplicate
01:07:47 Building wheel for omero-cli-duplicate (pyproject.toml): started
01:07:48 Building wheel for omero-cli-duplicate (pyproject.toml): finished with status 'done'
01:07:48 Created wheel for omero-cli-duplicate: filename=omero_cli_duplicate-0.4.1.dev0-py3-none-any.whl size=11443 sha256=89c6485f38535f5982e2ef436b3aa027f674af8724c8a76f92401caf0d98a800
01:07:48 Stored in directory: /tmp/pip-ephem-wheel-cache-z9zmcjhg/wheels/f1/55/ac/0cb8b093a4c417e5157143839711e7613efa64eaa21c29ef84
01:07:48 Successfully built omero-cli-duplicate
01:07:48 Installing collected packages: omero-cli-duplicate
01:07:48 Successfully installed omero-cli-duplicate-0.4.1.dev0
01:07:48 + source /home/omero/workspace/OMERO-test-integration/src/docs/hudson/functions.sh
01:07:48 + /home/omero/workspace/OMERO-test-integration/src/build.py build-default test-compile
01:07:48 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
01:07:48 Buildfile: /home/omero/workspace/OMERO-test-integration/src/build.xml
01:07:49
01:07:49 check-ivy:
01:07:49 Creating /home/omero/workspace/OMERO-test-integration/src/etc/local.properties
01:07:49 Created dir: /home/omero/workspace/OMERO-test-integration/src/target
01:07:49 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:07:49 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
01:07:50
01:07:50 build-scons:
01:07:50 Expanding: /home/omero/workspace/OMERO-test-integration/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-test-integration/src/target/scons
01:07:50
01:07:50 build:
01:07:50 No sub-builds to iterate on
01:07:50 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb...
01:07:50 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb...
01:07:50 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroFS...
01:07:50 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava...
01:07:50
01:07:50 tools-init:
01:07:50 no-op
01:07:51
01:07:51 retrieve:
01:07:51 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:07:51 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
01:07:51 WARNING: An illegal reflective access operation has occurred
01:07:51 WARNING: Illegal reflective access by org.apache.ivy.util.url.IvyAuthenticator (file:/home/omero/workspace/OMERO-test-integration/src/lib/repository/ivy-2.4.0.jar) to field java.net.Authenticator.theAuthenticator
01:07:51 WARNING: Please consider reporting this to the maintainers of org.apache.ivy.util.url.IvyAuthenticator
01:07:51 WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
01:07:51 WARNING: All illegal access operations will be denied in a future release
01:08:08
01:08:08 prepare:
01:08:08 Preparing: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs
01:08:08 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/.done
01:08:08 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/src
01:08:08 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources
01:08:08 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes
01:08:08 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/test-classes
01:08:08 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/reports
01:08:08 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources
01:08:08 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes
01:08:08 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources
01:08:08 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes
01:08:08 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources
01:08:08 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes
01:08:08 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources
01:08:08 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes
01:08:08
01:08:08 pre-compile:
01:08:08 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes
01:08:08 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes
01:08:09 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes
01:08:09 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes
01:08:09 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes
01:08:09
01:08:09 compile:
01:08:09 no-op
01:08:09
01:08:09 package:
01:08:09 Building jar: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/omero_client.jar
01:08:10
01:08:10 install:
01:08:10 :: delivering :: omero#omero_client;working@2fed98c19e20 :: 5.6.3-453-fe62e979b0-ice36-ice36 :: integration :: Tue Apr 16 01:07:50 UTC 2024
01:08:10 delivering ivy file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/ivy.xml
01:08:10 :: publishing :: omero#omero_client
01:08:10 published omero_client to /home/omero/workspace/OMERO-test-integration/src/target/repository/omero/omero_client/5.6.3-453-fe62e979b0-ice36-ice36/omero_client-5.6.3-453-fe62e979b0-ice36-ice36.jar
01:08:10 published ivy to /home/omero/workspace/OMERO-test-integration/src/target/repository/omero/omero_client/5.6.3-453-fe62e979b0-ice36-ice36/omero_client-5.6.3-453-fe62e979b0-ice36-ice36.xml
01:08:10 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy...
01:08:10 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy...
01:08:10
01:08:10 retrieve:
01:08:10 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:08:10 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml
01:08:10 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools...
01:08:10
01:08:10 dist:
01:08:10 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/target/service-classes/META-INF
01:08:10 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/target/lib/server
01:08:10 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/target/downloads/scripts
01:08:10 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/target/build/lib
01:08:10 Getting: https://merge-ci.openmicroscopy.org/jenkins//job/OMERO-python-superbuild-build/lastSuccessfulBuild/artifact/omero-scripts/dist//omero-scripts-5.8.1.dev0.tar.gz
01:08:10 To: /home/omero/workspace/OMERO-test-integration/src/components/tools/target/downloads/scripts/omero-scripts-5.8.1.dev0.tar.gz
01:08:10 Error opening connection java.io.FileNotFoundException: https://merge-ci.openmicroscopy.org/jenkins//job/OMERO-python-superbuild-build/lastSuccessfulBuild/artifact/omero-scripts/dist//omero-scripts-5.8.1.dev0.tar.gz
01:08:10 Error opening connection java.io.FileNotFoundException: https://merge-ci.openmicroscopy.org/jenkins//job/OMERO-python-superbuild-build/lastSuccessfulBuild/artifact/omero-scripts/dist//omero-scripts-5.8.1.dev0.tar.gz
01:08:10 Error opening connection java.io.FileNotFoundException: https://merge-ci.openmicroscopy.org/jenkins//job/OMERO-python-superbuild-build/lastSuccessfulBuild/artifact/omero-scripts/dist//omero-scripts-5.8.1.dev0.tar.gz
01:08:10 Can't get https://merge-ci.openmicroscopy.org/jenkins//job/OMERO-python-superbuild-build/lastSuccessfulBuild/artifact/omero-scripts/dist//omero-scripts-5.8.1.dev0.tar.gz to /home/omero/workspace/OMERO-test-integration/src/components/tools/target/downloads/scripts/omero-scripts-5.8.1.dev0.tar.gz
01:08:10
01:08:10 BUILD FAILED
01:08:10 /home/omero/workspace/OMERO-test-integration/src/build.xml:103: The following error occurred while executing this line:
01:08:10 /home/omero/workspace/OMERO-test-integration/src/components/antlib/resources/global.xml:316: The following error occurred while executing this line:
01:08:10 /home/omero/workspace/OMERO-test-integration/src/components/tools/build.xml:48: The following error occurred while executing this line:
01:08:10 /home/omero/workspace/OMERO-test-integration/src/components/antlib/resources/global.xml:503: Can't get https://merge-ci.openmicroscopy.org/jenkins//job/OMERO-python-superbuild-build/lastSuccessfulBuild/artifact/omero-scripts/dist//omero-scripts-5.8.1.dev0.tar.gz to /home/omero/workspace/OMERO-test-integration/src/components/tools/target/downloads/scripts/omero-scripts-5.8.1.dev0.tar.gz
01:08:10
01:08:10 Total time: 21 seconds
01:08:10 Build step 'Execute shell' marked build as failure
01:08:10 Recording test results
01:08:11 ERROR: Step ‘Publish JUnit test result report’ failed: No test report files were found. Configuration error?
01:08:11 TestNG Reports Processing: START
01:08:11 Looking for TestNG results report in workspace using pattern: **/OmeroJava/target/reports/integration/*.xml
01:08:12 Did not find any matching files.
01:08:12 Finished: FAILURE