Changes

Summary

Release omero-zarr-pixel-buffer 0.6.0-rc1 (details)
Bump version to 0.6.0-SNAPSHOT (details)
README updates (requirements, installation & usage) (details)
Apply suggestions from code review (details)
Add suggestions from code review (details)
Fix license statement (details)
Add links to label section and percent-encoding requirement (details)
Add note about ExternalInfo tooling (details)
Checkstyle: add Google Java Style configuration (details)
Checkstyle configuration adjustements (details)
Update Java source code to comply with checkstyle configuration (details)
Add file to exclude checkstyle related commit on git blame (details)
Update ZarrPixelBufferTest to use bioformats2raw 0.11.0 native features (details)
Restore resolutions variables for readability (details)
ZarrPixelBufferTest: remove hardcoded values in testGetTile (details)
Factorize axes and plane checks (details)
More hardcoded values removal (details)

Commit 8f44d02fe99fff4a132cfb266a1e248d2939691b by sbesson Release omero-zarr-pixel-buffer 0.6.0-rc1
The file was modified	build.gradle (diff)
Commit 9ef112d3cbff598d70af572217ad8137721e3592 by sbesson Bump version to 0.6.0-SNAPSHOT
The file was modified	build.gradle (diff)
Commit e0c087aa6ff16d338a1e34584e81cda81b06a2a4 by sbesson README updates (requirements, installation & usage) - Add libblosc as a requirement of the extension - Separate the installation from the usage as top-level section - Describe the deployment via modifying an existing server or rebuilding - Expand the requirements of the Zarr data that can be read - Describe the two types of Zarr paths that can be used (filesystem and S3) - Describe the profile and anonymous query parameters
The file was modified	README.md (diff)
Commit aabad0e937142e98f1ec80098ed7a51dfb5779a2 by noreply Apply suggestions from code review Co-authored-by: Melissa Linkert <melissa@glencoesoftware.com>
The file was modified	README.md (diff)
Commit 6ddd79098a9363277494fcdbf3b4851035b10702 by sbesson Add suggestions from code review
The file was modified	README.md (diff)
Commit 671b3a87cfd35ec510cccc5163815fe5e0c26eaf by sbesson Fix license statement
The file was modified	README.md (diff)
Commit a0f1d8a4c7c02808ab64fa59473ca7f976495761 by sbesson Add links to label section and percent-encoding requirement
The file was modified	README.md (diff)
Commit ab4c5cb2e94d5c8f3d70b7ea35af3a9d1433c03f by sbesson Add note about ExternalInfo tooling
The file was modified	README.md (diff)
Commit 3c33a833990428ced13fa63c5aabe07e62ba0b5f by sbesson Checkstyle: add Google Java Style configuration See https://checkstyle.org/google_style.html Add the checkstyle plugin to the Gradle build Set default checkstyle severity to error
The file was modified	build.gradle (diff)
The file was added	config/checkstyle/checkstyle.xml
Commit cb4ce51064b05cf293a4e2a3af7623e7f28b98bf by sbesson Checkstyle configuration adjustements - use default indentation rules, see https://checkstyle.sourceforge.io/checks/misc/indentation.html - use default MemberName and ParameterName format, see https://checkstyle.sourceforge.io/checks/naming/membername.html and https://checkstyle.sourceforge.io/checks/naming/parametername.html - allow up to 4 consecutive capital letters, see https://checkstyle.sourceforge.io/checks/naming/abbreviationaswordinname.html
The file was modified	config/checkstyle/checkstyle.xml (diff)
Commit a5da2cad2e1f73c18df90bbfbe5d06f2bbd3357e by sbesson Update Java source code to comply with checkstyle configuration - fix package and import errors - fix whitespace errors - fix Javadoc errors - fix variable name errors - fix indentation errors - fix curly braces errors - fix errors by calling constants static final - fix long line errors - move operators to a newline - fix maximum distance between variable declaration and usage
The file was modified	src/main/java/com/glencoesoftware/omero/zarr/ZarrPixelsService.java (diff)
The file was modified	src/main/java/com/glencoesoftware/omero/zarr/OmeroAmazonS3ClientFactory.java (diff)
The file was modified	src/main/java/com/glencoesoftware/omero/zarr/OmeroS3ReadOnlySeekableByteChannel.java (diff)
The file was modified	src/test/java/com/glencoesoftware/omero/zarr/ZarrPixelsServiceTest.java (diff)
The file was modified	src/main/java/com/glencoesoftware/omero/zarr/ZarrPixelBuffer.java (diff)
The file was modified	src/test/java/com/glencoesoftware/omero/zarr/ZarrPixelBufferTest.java (diff)
The file was modified	src/main/java/com/glencoesoftware/omero/zarr/OmeroS3FileSystem.java (diff)
The file was modified	src/main/java/com/upplication/s3fs/OmeroS3FilesystemProvider.java (diff)
The file was modified	src/test/java/com/glencoesoftware/omero/zarr/TestZarr.java (diff)
Commit f68354049013640507f3ab3a6c2c3e53f25bda3a by sbesson Add file to exclude checkstyle related commit on git blame
The file was added	.git-blame-ignore-revs
Commit c73fab72ee767587a4feb937f627fc0caf934a5e by sbesson Update ZarrPixelBufferTest to use bioformats2raw 0.11.0 native features - bump com.glencoesoftware:bioformats2raw test dependency from 0.9.1 to 0.11.0 - remove metadata edition in ZarrPixelBufferTest.writeTestZarr - update ZarrPixelBufferTest.assertBioFormats2Raw to pass options - remove resolutions in ZarrPixelBufferTest.writeTestZarr in favor of --resolutions option - use --compact option for testing Zarr datasets with 2D-5D dimensions - remove the TestZarr class superseded by bioformats2raw --compact - add unit test reading 3D chunks created with bioformats2raw --chunk-depth
The file was modified	build.gradle (diff)
The file was removed	src/test/java/com/glencoesoftware/omero/zarr/TestZarr.java
The file was modified	src/test/java/com/glencoesoftware/omero/zarr/ZarrPixelBufferTest.java (diff)
Commit 28d32b447bf25a62ac5988795d55888ddf1bbd0f by sbesson Restore resolutions variables for readability
The file was modified	src/test/java/com/glencoesoftware/omero/zarr/ZarrPixelBufferTest.java (diff)
Commit 7418bb56739f2364a51ce9ea95c50e5fa5898e7b by sbesson ZarrPixelBufferTest: remove hardcoded values in testGetTile
The file was modified	src/test/java/com/glencoesoftware/omero/zarr/ZarrPixelBufferTest.java (diff)
Commit c371383f14169c26a07c5d6d97a6064721deceff by sbesson Factorize axes and plane checks
The file was modified	src/test/java/com/glencoesoftware/omero/zarr/ZarrPixelBufferTest.java (diff)
Commit 347bd819e62bf68ad8f0c019062805443b631fdd by sbesson More hardcoded values removal
The file was modified	src/test/java/com/glencoesoftware/omero/zarr/ZarrPixelBufferTest.java (diff)