Console Output

Skipping 2,105 KB.. Full Log
#14 432.0 Progress (4): 461/591 kB | 282 kB | 121 kB | 27 kB
                                                  
Downloading from central: https://repo.maven.apache.org/maven2/org/fusesource/hawtbuf/hawtbuf/1.9/hawtbuf-1.9.jar
#14 432.0 Progress (4): 465/591 kB | 282 kB | 121 kB | 27 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/sonatype/spice/zapper/spice-zapper/1.3/spice-zapper-1.3.jar (121 kB at 498 kB/s)
#14 432.0 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/3.0.8/plexus-utils-3.0.8.jar
#14 432.0 Progress (3): 551/591 kB | 282 kB | 27 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpcore/4.3.2/httpcore-4.3.2.jar (282 kB at 1.1 MB/s)
#14 432.0 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-interpolation/1.15/plexus-interpolation-1.15.jar
#14 432.0 Downloaded from central: https://repo.maven.apache.org/maven2/org/fusesource/hawtbuf/hawtbuf-proto/1.9/hawtbuf-proto-1.9.jar (27 kB at 108 kB/s)
#14 432.0 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/aether/aether-api/1.13.1/aether-api-1.13.1.jar
#14 432.0 Progress (2): 591 kB | 4.1/50 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpclient/4.3.5/httpclient-4.3.5.jar (591 kB at 2.3 MB/s)
#14 432.0 Progress (2): 50 kB | 25/232 kB
                               
Downloading from central: https://repo.maven.apache.org/maven2/ch/qos/logback/logback-core/1.1.2/logback-core-1.1.2.jar
#14 432.0 Progress (2): 50 kB | 29/232 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/fusesource/hawtbuf/hawtbuf/1.9/hawtbuf-1.9.jar (50 kB at 189 kB/s)
#14 432.0 Progress (3): 172/232 kB | 60 kB | 49/90 kB
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Downloading from central: https://repo.maven.apache.org/maven2/ch/qos/logback/logback-classic/1.1.2/logback-classic-1.1.2.jar
#14 432.0 Progress (3): 180/232 kB | 60 kB | 49/90 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-interpolation/1.15/plexus-interpolation-1.15.jar (60 kB at 222 kB/s)
#14 432.0 Progress (3): 232 kB | 90 kB | 94/428 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/sonatype/aether/aether-api/1.13.1/aether-api-1.13.1.jar (90 kB at 321 kB/s)
#14 432.0 Progress (3): 232 kB | 229/428 kB | 29/271 kB
                                             
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/3.0.8/plexus-utils-3.0.8.jar (232 kB at 831 kB/s)
#14 432.0 Progress (2): 229/428 kB | 33/271 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/ch/qos/logback/logback-core/1.1.2/logback-core-1.1.2.jar (428 kB at 1.4 MB/s)
#14 432.1 Downloaded from central: https://repo.maven.apache.org/maven2/ch/qos/logback/logback-classic/1.1.2/logback-classic-1.1.2.jar (271 kB at 891 kB/s)
#14 432.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/maven-bundle-plugin/2.5.0/maven-bundle-plugin-2.5.0.pom
#14 432.2 Progress (1): 4.1/4.7 kB
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#14 432.3 Downloading from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/bndlib/2.3.0/bndlib-2.3.0.pom
#14 432.3 Progress (1): 1.4 kB
                    
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#14 432.3 Downloading from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/parent/2.3.0/parent-2.3.0.pom
#14 432.3 Progress (1): 4.1/4.1 kB
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#14 432.3 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.core/4.3.1/org.osgi.core-4.3.1.pom
#14 432.3 Progress (1): 1.4 kB
                    
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#14 432.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-core/2.0.7/maven-core-2.0.7.pom
#14 432.4 Progress (1): 4.1/6.7 kB
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#14 432.4 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven/2.0.7/maven-2.0.7.pom
#14 432.4 Progress (1): 4.1/11 kB
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#14 432.4 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-parent/5/maven-parent-5.pom
#14 432.4 Progress (1): 4.1/15 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-settings/2.0.7/maven-settings-2.0.7.jar (49 kB at 1.6 MB/s)
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Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-parameter-documenter/2.0.7/maven-plugin-parameter-documenter-2.0.7.jar
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Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/felix/maven-bundle-plugin/2.5.0/maven-bundle-plugin-2.5.0.jar (175 kB at 4.0 MB/s)
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#14 433.9 Progress (3): 1.2/1.8 MB | 35 kB | 41/86 kB
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Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-repository-metadata/2.0.7/maven-repository-metadata-2.0.7.jar
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#14 433.9 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-error-diagnostics/2.0.7/maven-error-diagnostics-2.0.7.jar
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#14 433.9 Progress (4): 1.6/1.8 MB | 88 kB | 24 kB | 14 kB
                                                
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#14 433.9 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-project/2.0.7/maven-project-2.0.7.jar
#14 433.9 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-registry/2.0.7/maven-plugin-registry-2.0.7.jar
#14 433.9 Progress (3): 1.6/1.8 MB | 24 kB | 14 kB
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#14 433.9 Progress (2): 1.7/1.8 MB | 14 kB
                                
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#14 433.9 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-api/2.0.7/maven-plugin-api-2.0.7.jar
#14 433.9 Progress (2): 1.8 MB | 4.1/117 kB
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#14 433.9 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-descriptor/2.0.7/maven-plugin-descriptor-2.0.7.jar
#14 433.9 Progress (4): 117 kB | 29 kB | 30 kB | 4.1/13 kB
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#14 433.9 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact-manager/2.0.7/maven-artifact-manager-2.0.7.jar
#14 433.9 Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-project/2.0.7/maven-project-2.0.7.jar (117 kB at 1.0 MB/s)
#14 433.9 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-monitor/2.0.7/maven-monitor-2.0.7.jar
#14 433.9 Downloaded from central: https://repo.maven.apache.org/maven2/commons-cli/commons-cli/1.0/commons-cli-1.0.jar (30 kB at 253 kB/s)
#14 433.9 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-archiver/2.5/maven-archiver-2.5.jar
#14 433.9 Progress (2): 13 kB | 4.1/37 kB
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#14 433.9 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-archiver/2.1/plexus-archiver-2.1.jar
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#14 433.9 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-io/2.0.2/plexus-io-2.0.2.jar
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#14 433.9 [output clipped, log limit 2MiB reached]
#14 526.7 SLF4J: No SLF4J providers were found.
#14 526.7 SLF4J: Defaulting to no-operation (NOP) logger implementation
#14 526.7 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#14 DONE 536.4s

#15 [11/13] WORKDIR /bio-formats-build/bioformats
#15 DONE 0.1s

#16 [12/13] RUN ant jars tools
#16 0.720 Buildfile: /bio-formats-build/bioformats/build.xml
#16 1.298      [echo] isSnapshot = true
#16 1.400 
#16 1.400 copy-jars:
#16 1.400 
#16 1.400 deps-formats-api:
#16 1.480      [echo] isSnapshot = true
#16 1.539 
#16 1.539 install-pom:
#16 1.738 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.0.0-SNAPSHOT/pom-bio-formats-8.0.0-SNAPSHOT.pom
#16 1.760 [resolver:install] Installing ome:pom-bio-formats:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 1.765 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 1.767 
#16 1.767 jar-formats-api:
#16 1.898      [echo] isSnapshot = true
#16 2.079 
#16 2.079 init-title:
#16 2.079      [echo] ----------=========== formats-api ===========----------
#16 2.079 
#16 2.079 init-timestamp:
#16 2.083 
#16 2.083 init:
#16 2.083 
#16 2.083 copy-resources:
#16 2.084     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.099      [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.102 
#16 2.102 compile:
#16 2.309 [resolver:resolve] Resolving artifacts
#16 2.337     [javac] Compiling 53 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 3.025     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:52: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.025     [javac] import loci.common.ReflectedUniverse;
#16 3.025     [javac]                   ^
#16 3.225     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.225     [javac]     int currentIndex = r.getCoreIndex();
#16 3.225     [javac]                         ^
#16 3.225     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.225     [javac]     r.setCoreIndex(coreIndex);
#16 3.225     [javac]      ^
#16 3.226     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.226     [javac]     r.setCoreIndex(currentIndex);
#16 3.226     [javac]      ^
#16 3.326     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.326     [javac]   public void setCoreIndex(int no) {
#16 3.326     [javac]               ^
#16 3.327     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.327     [javac]   public int getCoreIndex() {
#16 3.327     [javac]              ^
#16 3.327     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.327     [javac]   public int coreIndexToSeries(int index)
#16 3.327     [javac]              ^
#16 3.327     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.327     [javac]   public int seriesToCoreIndex(int series)
#16 3.328     [javac]              ^
#16 3.328     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.328     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 3.328     [javac]                             ^
#16 3.428     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.428     [javac]     if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#16 3.428     [javac]                                              ^
#16 3.428     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.428     [javac]     if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#16 3.428     [javac]                                              ^
#16 3.428     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.428     [javac]       core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 3.428     [javac]                                                      ^
#16 3.429     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.429     [javac]       core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#16 3.429     [javac]                                                      ^
#16 3.529     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.529     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#16 3.529     [javac]     ^
#16 3.529     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.529     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#16 3.529     [javac]                               ^
#16 3.630     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:773: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.630     [javac]   public void setCoreIndex(int no) {
#16 3.630     [javac]               ^
#16 3.630     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:767: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.630     [javac]   public int getCoreIndex() {
#16 3.630     [javac]              ^
#16 3.630     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:783: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.630     [javac]   public int coreIndexToSeries(int index) {
#16 3.630     [javac]              ^
#16 3.630     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:778: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.631     [javac]   public int seriesToCoreIndex(int series) {
#16 3.631     [javac]              ^
#16 3.631     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:587: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.631     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 3.631     [javac]                             ^
#16 3.631     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:588: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.631     [javac]     return getReader().getCoreMetadataList();
#16 3.631     [javac]                       ^
#16 3.631     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:768: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.631     [javac]     return getReader().getCoreIndex();
#16 3.631     [javac]                       ^
#16 3.631     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:774: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.631     [javac]     getReader().setCoreIndex(no);
#16 3.631     [javac]                ^
#16 3.631     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:779: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.631     [javac]     return getReader().seriesToCoreIndex(series);
#16 3.631     [javac]                       ^
#16 3.631     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:784: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.631     [javac]     return getReader().coreIndexToSeries(index);
#16 3.632     [javac]                       ^
#16 3.732     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.732     [javac]   public void setCoreIndex(int no) {
#16 3.732     [javac]               ^
#16 3.732     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.732     [javac]   public int getCoreIndex() {
#16 3.732     [javac]              ^
#16 3.732     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.732     [javac]   public int coreIndexToSeries(int index) {
#16 3.732     [javac]              ^
#16 3.732     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.732     [javac]   public int seriesToCoreIndex(int series) {
#16 3.732     [javac]              ^
#16 3.732     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.732     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 3.732     [javac]                             ^
#16 3.732     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.732     [javac]     List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 3.732     [javac]                                        ^
#16 3.733     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.733     [javac]     return reader.getCoreIndex();
#16 3.733     [javac]                  ^
#16 3.733     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.733     [javac]     reader.setCoreIndex(no);
#16 3.733     [javac]           ^
#16 3.733     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.733     [javac]     return reader.seriesToCoreIndex(series);
#16 3.733     [javac]                  ^
#16 3.733     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.733     [javac]     return reader.coreIndexToSeries(index);
#16 3.733     [javac]                  ^
#16 3.825     [javac] Note: Some input files use unchecked or unsafe operations.
#16 3.825     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 3.825     [javac] 35 warnings
#16 3.825 
#16 3.825 formats-api.jar:
#16 3.826     [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#16 3.851       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#16 3.882 [resolver:install] Using default POM (ome:formats-api:8.0.0-SNAPSHOT)
#16 3.886 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.pom
#16 3.896 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.jar
#16 3.898 [resolver:install] Installing ome:formats-api:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 3.900 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 3.901 
#16 3.901 deps-turbojpeg:
#16 3.901 
#16 3.901 jar-turbojpeg:
#16 4.016      [echo] isSnapshot = true
#16 4.187 
#16 4.187 init-title:
#16 4.188      [echo] ----------=========== turbojpeg ===========----------
#16 4.188 
#16 4.188 init-timestamp:
#16 4.188 
#16 4.188 init:
#16 4.188 
#16 4.188 copy-resources:
#16 4.188     [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 4.189 
#16 4.189 compile:
#16 4.200 [resolver:resolve] Resolving artifacts
#16 4.204     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 4.963 
#16 4.963 jar:
#16 4.968       [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#16 5.154 [resolver:install] Using default POM (ome:turbojpeg:8.0.0-SNAPSHOT)
#16 5.162 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.pom
#16 5.171 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.jar
#16 5.173 [resolver:install] Installing ome:turbojpeg:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 5.177 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 5.178 
#16 5.178 deps-formats-bsd:
#16 5.179 
#16 5.179 jar-formats-bsd:
#16 5.278      [echo] isSnapshot = true
#16 5.450 
#16 5.450 init-title:
#16 5.451      [echo] ----------=========== formats-bsd ===========----------
#16 5.451 
#16 5.451 init-timestamp:
#16 5.451 
#16 5.451 init:
#16 5.451 
#16 5.451 copy-resources:
#16 5.451     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 5.454      [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 5.456 
#16 5.456 compile:
#16 5.684 [resolver:resolve] Resolving artifacts
#16 5.719     [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 6.829     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:45: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 6.829     [javac] import loci.common.ReflectedUniverse;
#16 6.829     [javac]                   ^
#16 7.129     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.129     [javac]       core.size() != reader.getCoreMetadataList().size())
#16 7.129     [javac]                            ^
#16 7.130     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.130     [javac]       List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 7.130     [javac]                                          ^
#16 7.130     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.130     [javac]     int n = reader.getCoreMetadataList().size();
#16 7.130     [javac]                   ^
#16 7.130     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 7.130     [javac]     reader.setCoreIndex(coreIndex);
#16 7.130     [javac]           ^
#16 7.130     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.130     [javac]     int n = reader.getCoreMetadataList().size();
#16 7.130     [javac]                   ^
#16 7.130     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.130     [javac]     int n = reader.getCoreMetadataList().size();
#16 7.130     [javac]                   ^
#16 7.130     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 7.130     [javac]     if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#16 7.130     [javac]                                         ^
#16 7.130     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.130     [javac]     int n = reader.getCoreMetadataList().size();
#16 7.130     [javac]                   ^
#16 7.130     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 7.130     [javac]     if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#16 7.130     [javac]                                         ^
#16 7.130     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.130     [javac]     int n = reader.getCoreMetadataList().size();
#16 7.130     [javac]                   ^
#16 7.130     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 7.130     [javac]     if (n > 1 || noStitch) reader.setCoreIndex(no);
#16 7.130     [javac]                                  ^
#16 7.130     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 7.130     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 7.130     [javac]                  ^
#16 7.130     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 7.131     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 7.131     [javac]                                              ^
#16 7.231     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.231     [javac]     return noStitch ? reader.getCoreMetadataList() : core;
#16 7.231     [javac]                             ^
#16 7.231     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.231     [javac]     if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#16 7.231     [javac]               ^
#16 7.231     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.231     [javac]       seriesCount = reader.getCoreMetadataList().size();
#16 7.231     [javac]                           ^
#16 7.231     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.231     [javac]       if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#16 7.231     [javac]                 ^
#16 7.231     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.231     [javac]     if (reader.getCoreMetadataList().size() > 1) return 0;
#16 7.231     [javac]               ^
#16 7.231     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.231     [javac]       r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#16 7.231     [javac]                            ^
#16 7.332     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.332     [javac]     int seriesCount = unwrap().getCoreMetadataList().size();
#16 7.332     [javac]                               ^
#16 7.432     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 7.432     [javac]     BitWriter out = new BitWriter();
#16 7.432     [javac]     ^
#16 7.432     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 7.432     [javac]     BitWriter out = new BitWriter();
#16 7.432     [javac]                         ^
#16 8.333     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:618: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.333     [javac]       OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#16 8.333     [javac]                                                                    ^
#16 8.433     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#16 8.433     [javac]     StreamTokenizer st = new StreamTokenizer(in);
#16 8.433     [javac]                          ^
#16 8.533     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.533     [javac]     core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 8.533     [javac]                                                    ^
#16 8.533     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 8.534     [javac]   protected ReflectedUniverse r;
#16 8.534     [javac]             ^
#16 8.534     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 8.534     [javac]       r = new ReflectedUniverse();
#16 8.534     [javac]               ^
#16 8.534     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:992: warning: [deprecation] NM in UNITS has been deprecated
#16 8.534     [javac]           wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#16 8.534     [javac]                                                                               ^
#16 8.534     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1024: warning: [deprecation] MM in UNITS has been deprecated
#16 8.534     [javac]           sliceThickness.value = padString(String.valueOf(physicalZ.value(UNITS.MM)));
#16 8.534     [javac]                                                                                ^
#16 8.534     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1037: warning: [deprecation] MM in UNITS has been deprecated
#16 8.534     [javac]         String px = physicalX == null ? "1" : String.valueOf(physicalX.value(UNITS.MM));
#16 8.534     [javac]                                                                                   ^
#16 8.534     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1038: warning: [deprecation] MM in UNITS has been deprecated
#16 8.534     [javac]         String py = physicalY == null ? "1" : String.valueOf(physicalY.value(UNITS.MM));
#16 8.534     [javac]                                                                                   ^
#16 8.534     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1057: warning: [deprecation] MM in UNITS has been deprecated
#16 8.534     [javac]         volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#16 8.534     [javac]                                                                                        ^
#16 8.534     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1061: warning: [deprecation] MM in UNITS has been deprecated
#16 8.534     [javac]         volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#16 8.534     [javac]                                                                                         ^
#16 8.534     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1067: warning: [deprecation] MM in UNITS has been deprecated
#16 8.534     [javac]         volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#16 8.534     [javac]                                                                                        ^
#16 8.534     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1115: warning: [deprecation] MM in UNITS has been deprecated
#16 8.534     [javac]             offsetX.value = padString(physicalX == null ? "0" : padString(String.valueOf(physicalX.value(UNITS.MM).floatValue() * width)));
#16 8.534     [javac]                                                                                                               ^
#16 8.534     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1119: warning: [deprecation] MM in UNITS has been deprecated
#16 8.534     [javac]             offsetY.value = padString(physicalY == null ? "0" : padString(String.valueOf(physicalY.value(UNITS.MM).floatValue() * height)));
#16 8.534     [javac]                                                                                                               ^
#16 8.635     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#16 8.635     [javac]       libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#16 8.635     [javac]                                        ^
#16 8.735     [javac] Note: Some input files use unchecked or unsafe operations.
#16 8.735     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 8.735     [javac] 38 warnings
#16 8.903 
#16 8.903 formats-bsd.jar:
#16 8.913       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#16 9.030 [resolver:install] Using default POM (ome:formats-bsd:8.0.0-SNAPSHOT)
#16 9.034 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.pom
#16 9.051 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.jar
#16 9.053 [resolver:install] Installing ome:formats-bsd:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 9.056 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 9.056 
#16 9.056 deps-formats-gpl:
#16 9.056 
#16 9.056 jar-formats-gpl:
#16 9.152      [echo] isSnapshot = true
#16 9.319 
#16 9.319 init-title:
#16 9.320      [echo] ----------=========== formats-gpl ===========----------
#16 9.320 
#16 9.320 init-timestamp:
#16 9.320 
#16 9.320 init:
#16 9.320 
#16 9.320 copy-resources:
#16 9.320     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 9.322      [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 9.322 
#16 9.322 compile:
#16 9.794 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.pom
#16 10.04 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.pom
#16 10.34 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.pom
#16 10.88 [resolver:resolve] Downloaded https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.pom (0 B at 0.0 KB/sec)
#16 10.89 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.pom
#16 10.90 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.pom
#16 11.14 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.pom
#16 11.27 [resolver:resolve] Downloaded https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.pom (0 B at 0.0 KB/sec)
#16 11.34 [resolver:resolve] Resolving artifacts
#16 11.35 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar
#16 11.35 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar
#16 11.60 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar
#16 11.60 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar
#16 11.87 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar
#16 11.87 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar
#16 12.26 [resolver:resolve] Downloaded https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar (0 B at 0.0 KB/sec)
#16 12.26 [resolver:resolve] Downloaded https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar (0 B at 0.0 KB/sec)
#16 12.28     [javac] Compiling 173 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 13.29     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:50: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 13.29     [javac] import loci.formats.codec.BitWriter;
#16 13.29     [javac]                          ^
#16 13.29     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:43: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 13.29     [javac] import loci.formats.codec.BitWriter;
#16 13.29     [javac]                          ^
#16 14.99     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:1321: warning: non-varargs call of varargs method with inexact argument type for last parameter;
#16 14.99     [javac]       LOGGER.trace("Parsing tokens: {}", tokens);
#16 14.99     [javac]                                          ^
#16 14.99     [javac]   cast to Object for a varargs call
#16 14.99     [javac]   cast to Object[] for a non-varargs call and to suppress this warning
#16 15.09     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1257: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.09     [javac]     BitWriter bits = null;
#16 15.09     [javac]     ^
#16 15.09     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1259: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.09     [javac]       bits = new BitWriter(planes[index].length / 8);
#16 15.09     [javac]                  ^
#16 15.39     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java:196: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 15.39     [javac]     CoreMetadata ms = new CoreMetadata(helperReader.getCoreMetadataList().get(0));
#16 15.39     [javac]                                                    ^
#16 15.69     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.69     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 15.69     [javac]     ^
#16 15.69     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.69     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 15.69     [javac]                          ^
#16 15.89     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:199: warning: [deprecation] getAttributes() in Variable has been deprecated
#16 15.89     [javac]       List<Attribute> attributes = variable.getAttributes();
#16 15.89     [javac]                                            ^
#16 15.89     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:201: warning: [deprecation] getName() in CDMNode has been deprecated
#16 15.89     [javac]         toReturn.put(attribute.getName(), arrayToString(attribute.getValues()));
#16 15.89     [javac]                               ^
#16 15.89     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:237: warning: [deprecation] getName() in CDMNode has been deprecated
#16 15.89     [javac]       String groupName = group.getName();
#16 15.89     [javac]                               ^
#16 15.89     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:238: warning: [deprecation] getAttributes() in Group has been deprecated
#16 15.89     [javac]       List<Attribute> attributes = group.getAttributes();
#16 15.89     [javac]                                         ^
#16 15.89     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:240: warning: [deprecation] getName() in CDMNode has been deprecated
#16 15.89     [javac]         String attributeName = attribute.getName();
#16 15.89     [javac]                                         ^
#16 15.89     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:246: warning: [deprecation] getName() in CDMNode has been deprecated
#16 15.89     [javac]         String variableName = variable.getName();
#16 15.89     [javac]                                       ^
#16 15.89     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:310: warning: [deprecation] open(String) in NetcdfFile has been deprecated
#16 15.89     [javac]     netCDFFile = NetcdfFile.open(currentId);
#16 15.89     [javac]                            ^
#16 15.93     [javac] Note: Some input files use unchecked or unsafe operations.
#16 15.93     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 15.93     [javac] 15 warnings
#16 15.93 
#16 15.93 formats-gpl.jar:
#16 15.94       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#16 16.08 [resolver:install] Using default POM (ome:formats-gpl:8.0.0-SNAPSHOT)
#16 16.09 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.pom
#16 16.09 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.jar
#16 16.09 [resolver:install] Installing ome:formats-gpl:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 16.09 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 16.09 
#16 16.09 deps-bio-formats-plugins:
#16 16.09 
#16 16.09 jar-bio-formats-plugins:
#16 16.19      [echo] isSnapshot = true
#16 16.36 
#16 16.36 init-title:
#16 16.36      [echo] ----------=========== bio-formats_plugins ===========----------
#16 16.36 
#16 16.36 init-timestamp:
#16 16.36 
#16 16.36 init:
#16 16.36 
#16 16.36 copy-resources:
#16 16.36     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 16.36      [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 16.37 
#16 16.37 compile:
#16 16.62 [resolver:resolve] Resolving artifacts
#16 16.64     [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 17.45     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:39: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 17.45     [javac] import loci.common.ReflectedUniverse;
#16 17.45     [javac]                   ^
#16 17.45     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:40: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 17.45     [javac] import loci.common.ReflectedUniverse;
#16 17.45     [javac]                   ^
#16 17.95     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:51: warning: [deprecation] STABLE_VERSION in UpgradeChecker has been deprecated
#16 17.95     [javac]     "Stable build (" + UpgradeChecker.STABLE_VERSION + ")";
#16 17.95     [javac]                                      ^
#16 18.05     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 18.05     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#16 18.05     [javac]         ^
#16 18.05     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 18.05     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#16 18.05     [javac]                                   ^
#16 18.15     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 18.15     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#16 18.15     [javac]     ^
#16 18.15     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 18.15     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#16 18.15     [javac]                                ^
#16 18.51     [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#16 18.51     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 18.51     [javac] 7 warnings
#16 18.51 
#16 18.51 bio-formats-plugins.jar:
#16 18.51       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#16 18.54 [resolver:install] Using default POM (ome:bio-formats_plugins:8.0.0-SNAPSHOT)
#16 18.55 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.pom
#16 18.56 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.jar
#16 18.57 [resolver:install] Installing ome:bio-formats_plugins:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 18.57 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 18.57 
#16 18.57 deps-bio-formats-tools:
#16 18.57 
#16 18.57 jar-bio-formats-tools:
#16 18.68      [echo] isSnapshot = true
#16 18.85 
#16 18.85 init-title:
#16 18.85      [echo] ----------=========== bio-formats-tools ===========----------
#16 18.85 
#16 18.85 init-timestamp:
#16 18.85 
#16 18.85 init:
#16 18.85 
#16 18.85 copy-resources:
#16 18.85     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 18.85 
#16 18.85 compile:
#16 19.10 [resolver:resolve] Resolving artifacts
#16 19.11     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 20.12 
#16 20.12 bio-formats-tools.jar:
#16 20.13       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#16 20.13 [resolver:install] Using default POM (ome:bio-formats-tools:8.0.0-SNAPSHOT)
#16 20.14 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.pom
#16 20.15 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.jar
#16 20.15 [resolver:install] Installing ome:bio-formats-tools:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 20.15 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 20.16 
#16 20.16 deps-tests:
#16 20.16 
#16 20.16 jar-tests:
#16 20.26      [echo] isSnapshot = true
#16 20.43 
#16 20.43 init-title:
#16 20.44      [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 20.44 
#16 20.44 init-timestamp:
#16 20.44 
#16 20.44 init:
#16 20.44 
#16 20.44 copy-resources:
#16 20.44     [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#16 20.44 
#16 20.44 compile:
#16 20.77 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15.pom
#16 20.86 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15.pom
#16 21.16 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15.pom
#16 21.56 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15.pom
#16 21.98 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15.pom (0 B at 0.0 KB/sec)
#16 22.00 [resolver:resolve] Resolving artifacts
#16 22.01 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15-jar-with-dependencies.jar
#16 22.23 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15-jar-with-dependencies.jar
#16 22.52 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15-jar-with-dependencies.jar
#16 22.91 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15-jar-with-dependencies.jar
#16 23.29 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#16 23.29     [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#16 24.21     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:605: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 24.21     [javac]         int index = unflattenedReader.getCoreIndex();
#16 24.21     [javac]                                      ^
#16 24.21     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:606: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 24.21     [javac]         reader.setCoreIndex(index);
#16 24.21     [javac]               ^
#16 24.41     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2247: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 24.41     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#16 24.41     [javac]                                              ^
#16 24.41     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2413: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 24.41     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#16 24.41     [javac]                                              ^
#16 24.69     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 24.69     [javac]         FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#16 24.69     [javac]                                                    ^
#16 24.69     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 24.69     [javac]         FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#16 24.69     [javac]                                                    ^
#16 24.69     [javac] Note: Some input files use unchecked or unsafe operations.
#16 24.69     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 24.69     [javac] 6 warnings
#16 24.69 
#16 24.69 tests.jar:
#16 24.70       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#16 24.71 [resolver:install] Using default POM (ome:test-suite:8.0.0-SNAPSHOT)
#16 24.71 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/test-suite-8.0.0-SNAPSHOT.pom
#16 24.73 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/test-suite-8.0.0-SNAPSHOT.jar
#16 24.73 [resolver:install] Installing ome:test-suite:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 24.73 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 24.73 
#16 24.73 jars:
#16 24.73 
#16 24.73 copy-jars:
#16 24.73 
#16 24.73 deps-formats-api:
#16 24.79      [echo] isSnapshot = true
#16 24.83 
#16 24.83 install-pom:
#16 25.00 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.0.0-SNAPSHOT/pom-bio-formats-8.0.0-SNAPSHOT.pom
#16 25.00 [resolver:install] Installing ome:pom-bio-formats:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 25.01 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 25.01 
#16 25.01 jar-formats-api:
#16 25.10      [echo] isSnapshot = true
#16 25.26 
#16 25.26 init-title:
#16 25.26      [echo] ----------=========== formats-api ===========----------
#16 25.26 
#16 25.26 init-timestamp:
#16 25.26 
#16 25.26 init:
#16 25.26 
#16 25.26 copy-resources:
#16 25.26 
#16 25.26 compile:
#16 25.40 [resolver:resolve] Resolving artifacts
#16 25.41 
#16 25.41 formats-api.jar:
#16 25.43 [resolver:install] Using default POM (ome:formats-api:8.0.0-SNAPSHOT)
#16 25.43 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.pom
#16 25.43 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.jar
#16 25.44 [resolver:install] Installing ome:formats-api:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 25.44 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 25.44 
#16 25.44 deps-turbojpeg:
#16 25.44 
#16 25.44 jar-turbojpeg:
#16 25.69      [echo] isSnapshot = true
#16 25.85 
#16 25.85 init-title:
#16 25.85      [echo] ----------=========== turbojpeg ===========----------
#16 25.85 
#16 25.85 init-timestamp:
#16 25.85 
#16 25.85 init:
#16 25.85 
#16 25.85 copy-resources:
#16 25.85 
#16 25.85 compile:
#16 25.86 [resolver:resolve] Resolving artifacts
#16 25.86 
#16 25.86 jar:
#16 25.87 [resolver:install] Using default POM (ome:turbojpeg:8.0.0-SNAPSHOT)
#16 25.88 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.pom
#16 25.88 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.jar
#16 25.88 [resolver:install] Installing ome:turbojpeg:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 25.89 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 25.89 
#16 25.89 deps-formats-bsd:
#16 25.89 
#16 25.89 jar-formats-bsd:
#16 25.98      [echo] isSnapshot = true
#16 26.15 
#16 26.15 init-title:
#16 26.15      [echo] ----------=========== formats-bsd ===========----------
#16 26.15 
#16 26.15 init-timestamp:
#16 26.15 
#16 26.15 init:
#16 26.15 
#16 26.15 copy-resources:
#16 26.15 
#16 26.15 compile:
#16 26.37 [resolver:resolve] Resolving artifacts
#16 26.39 
#16 26.39 formats-bsd.jar:
#16 26.43 [resolver:install] Using default POM (ome:formats-bsd:8.0.0-SNAPSHOT)
#16 26.43 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.pom
#16 26.43 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.jar
#16 26.43 [resolver:install] Installing ome:formats-bsd:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 26.44 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 26.44 
#16 26.44 deps-formats-gpl:
#16 26.44 
#16 26.44 jar-formats-gpl:
#16 26.52      [echo] isSnapshot = true
#16 26.70 
#16 26.70 init-title:
#16 26.70      [echo] ----------=========== formats-gpl ===========----------
#16 26.70 
#16 26.70 init-timestamp:
#16 26.70 
#16 26.70 init:
#16 26.70 
#16 26.70 copy-resources:
#16 26.70 
#16 26.70 compile:
#16 26.95 [resolver:resolve] Resolving artifacts
#16 26.97 
#16 26.97 formats-gpl.jar:
#16 27.01 [resolver:install] Using default POM (ome:formats-gpl:8.0.0-SNAPSHOT)
#16 27.02 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.pom
#16 27.02 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.jar
#16 27.02 [resolver:install] Installing ome:formats-gpl:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 27.02 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 27.02 
#16 27.02 deps-bio-formats-plugins:
#16 27.02 
#16 27.02 jar-bio-formats-plugins:
#16 27.11      [echo] isSnapshot = true
#16 27.28 
#16 27.28 init-title:
#16 27.28      [echo] ----------=========== bio-formats_plugins ===========----------
#16 27.28 
#16 27.28 init-timestamp:
#16 27.28 
#16 27.28 init:
#16 27.28 
#16 27.28 copy-resources:
#16 27.29 
#16 27.29 compile:
#16 27.54 [resolver:resolve] Resolving artifacts
#16 27.55 
#16 27.55 bio-formats-plugins.jar:
#16 27.57 [resolver:install] Using default POM (ome:bio-formats_plugins:8.0.0-SNAPSHOT)
#16 27.57 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.pom
#16 27.57 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.jar
#16 27.57 [resolver:install] Installing ome:bio-formats_plugins:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 27.57 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 27.57 
#16 27.57 deps-bio-formats-tools:
#16 27.57 
#16 27.57 jar-bio-formats-tools:
#16 27.67      [echo] isSnapshot = true
#16 27.84 
#16 27.84 init-title:
#16 27.84      [echo] ----------=========== bio-formats-tools ===========----------
#16 27.84 
#16 27.84 init-timestamp:
#16 27.84 
#16 27.84 init:
#16 27.84 
#16 27.84 copy-resources:
#16 27.84 
#16 27.84 compile:
#16 28.08 [resolver:resolve] Resolving artifacts
#16 28.09 
#16 28.09 bio-formats-tools.jar:
#16 28.09 [resolver:install] Using default POM (ome:bio-formats-tools:8.0.0-SNAPSHOT)
#16 28.10 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.pom
#16 28.10 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.jar
#16 28.10 [resolver:install] Installing ome:bio-formats-tools:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 28.10 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 28.10 
#16 28.10 deps-tests:
#16 28.10 
#16 28.10 jar-tests:
#16 28.19      [echo] isSnapshot = true
#16 28.36 
#16 28.36 init-title:
#16 28.36      [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 28.36 
#16 28.36 init-timestamp:
#16 28.36 
#16 28.36 init:
#16 28.37 
#16 28.37 copy-resources:
#16 28.37 
#16 28.37 compile:
#16 28.62 [resolver:resolve] Resolving artifacts
#16 28.63 
#16 28.63 tests.jar:
#16 28.64 [resolver:install] Using default POM (ome:test-suite:8.0.0-SNAPSHOT)
#16 28.64 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/test-suite-8.0.0-SNAPSHOT.pom
#16 28.64 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/test-suite-8.0.0-SNAPSHOT.jar
#16 28.65 [resolver:install] Installing ome:test-suite:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 28.65 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 28.65 
#16 28.65 jars:
#16 28.65 
#16 28.65 tools:
#16 28.65      [echo] ----------=========== bioformats_package ===========----------
#16 28.75      [echo] isSnapshot = true
#16 28.93 
#16 28.93 init-timestamp:
#16 28.93 
#16 28.93 bundle:
#16 29.22 [resolver:resolve] Resolving artifacts
#16 29.23     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.27     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.0.23-SNAPSHOT/ome-common-6.0.23-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.29     [unzip] Expanding: /home/build/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.32     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.32     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.39     [unzip] Expanding: /home/build/.m2/repository/xpp3/xpp3/1.1.4c/xpp3-1.1.4c.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.41     [unzip] Expanding: /home/build/.m2/repository/com/squareup/okhttp3/okhttp/3.7.0/okhttp-3.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.47     [unzip] Expanding: /home/build/.m2/repository/com/squareup/okio/okio/1.12.0/okio-1.12.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.48     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-databind/2.14.2/jackson-databind-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.72     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.14.2/jackson-core-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.78     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.14.2/jackson-annotations-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.80     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/kryo/5.4.0/kryo-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.86     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/reflectasm/1.11.9/reflectasm-1.11.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.87     [unzip] Expanding: /home/build/.m2/repository/org/objenesis/objenesis/3.3/objenesis-3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.88     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/minlog/1.3.1/minlog-1.3.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.88     [unzip] Expanding: /home/build/.m2/repository/joda-time/joda-time/2.12.2/joda-time-2.12.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.07     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/guava/32.0.0-jre/guava-32.0.0-jre.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.57     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/failureaccess/1.0.1/failureaccess-1.0.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.57     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/listenablefuture/9999.0-empty-to-avoid-conflict-with-guava/listenablefuture-9999.0-empty-to-avoid-conflict-with-guava.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.57     [unzip] Expanding: /home/build/.m2/repository/com/google/code/findbugs/jsr305/3.0.2/jsr305-3.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.58     [unzip] Expanding: /home/build/.m2/repository/org/checkerframework/checker-qual/3.33.0/checker-qual-3.33.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.67     [unzip] Expanding: /home/build/.m2/repository/com/google/errorprone/error_prone_annotations/2.18.0/error_prone_annotations-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.68     [unzip] Expanding: /home/build/.m2/repository/com/google/j2objc/j2objc-annotations/2.8/j2objc-annotations-2.8.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.68     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-xml/6.3.7-SNAPSHOT/ome-xml-6.3.7-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.75     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/specification/6.3.7-SNAPSHOT/specification-6.3.7-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.81     [unzip] Expanding: /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.82     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-codecs/1.0.4-SNAPSHOT/ome-codecs-1.0.4-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.83     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-jai/0.1.5-SNAPSHOT/ome-jai-0.1.5-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.98     [unzip] Expanding: /home/build/.m2/repository/io/airlift/aircompressor/0.27/aircompressor-0.27.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.02     [unzip] Expanding: /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.09     [unzip] Expanding: /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.13     [unzip] Expanding: /home/build/.m2/repository/org/scijava/native-lib-loader/2.4.0/native-lib-loader-2.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.14     [unzip] Expanding: /home/build/.m2/repository/commons-lang/commons-lang/2.6/commons-lang-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.17     [unzip] Expanding: /home/build/.m2/repository/org/perf4j/perf4j/0.9.16/perf4j-0.9.16.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.20     [unzip] Expanding: /home/build/.m2/repository/cisd/jhdf5/19.04.1/jhdf5-19.04.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.66     [unzip] Expanding: /home/build/.m2/repository/cisd/base/18.09.0/base-18.09.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.68     [unzip] Expanding: /home/build/.m2/repository/commons-io/commons-io/2.6/commons-io-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.71     [unzip] Expanding: /home/build/.m2/repository/org/apache/commons/commons-lang3/3.7/commons-lang3-3.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.79     [unzip] Expanding: /home/build/.m2/repository/com/drewnoakes/metadata-extractor/2.18.0/metadata-extractor-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.96     [unzip] Expanding: /home/build/.m2/repository/com/adobe/xmp/xmpcore/6.1.11/xmpcore-6.1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.98     [unzip] Expanding: /home/build/.m2/repository/ome/jxrlib-all/0.2.4/jxrlib-all-0.2.4.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.00     [unzip] Expanding: /home/build/.m2/repository/org/json/json/20231013/json-20231013.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.01     [unzip] Expanding: /home/build/.m2/repository/xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.25     [unzip] Expanding: /home/build/.m2/repository/xml-apis/xml-apis/1.4.01/xml-apis-1.4.01.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.32     [unzip] Expanding: /home/build/.m2/repository/org/yaml/snakeyaml/2.0/snakeyaml-2.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.38     [unzip] Expanding: /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.47     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/ome-mdbtools-5.3.4-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.49     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/metakit/5.3.8-SNAPSHOT/metakit-5.3.8-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.49     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/ome-poi-5.3.10-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.62     [unzip] Expanding: /home/build/.m2/repository/commons-logging/commons-logging/1.2/commons-logging-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.63     [unzip] Expanding: /home/build/.m2/repository/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.07     [unzip] Expanding: /home/build/.m2/repository/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.08     [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpclient/4.5.9/httpclient-4.5.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.19     [unzip] Expanding: /home/build/.m2/repository/commons-codec/commons-codec/1.11/commons-codec-1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.25     [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpmime/4.5.9/httpmime-4.5.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.26     [unzip] Expanding: /home/build/.m2/repository/com/google/re2j/re2j/1.3/re2j-1.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.27     [unzip] Expanding: /home/build/.m2/repository/org/xerial/sqlite-jdbc/3.28.0/sqlite-jdbc-3.28.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.43     [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-forms/1.7.2/jgoodies-forms-1.7.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.45     [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-common/1.7.0/jgoodies-common-1.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.46     [unzip] Expanding: /home/build/.m2/repository/org/slf4j/slf4j-api/2.0.9/slf4j-api-2.0.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.47     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.47     [unzip] Expanding: /home/build/.m2/repository/xalan/serializer/2.7.3/serializer-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.51     [unzip] Expanding: /home/build/.m2/repository/xalan/xalan/2.7.3/xalan-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.91     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-core/1.3.14/logback-core-1.3.14.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.03     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-classic/1.3.14/logback-classic-1.3.14.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.33       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#16 40.05    [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 40.65 [resolver:install] Using default POM (ome:bioformats_package:8.0.0-SNAPSHOT)
#16 40.66 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/8.0.0-SNAPSHOT/bioformats_package-8.0.0-SNAPSHOT.pom
#16 40.67 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/8.0.0-SNAPSHOT/bioformats_package-8.0.0-SNAPSHOT.jar
#16 40.70 [resolver:install] Installing ome:bioformats_package:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 40.71 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#16 40.71 
#16 40.71 BUILD SUCCESSFUL
#16 40.71 Total time: 39 seconds
#16 DONE 40.9s

#17 [13/13] WORKDIR /bio-formats-build/bioformats/components/test-suite
#17 DONE 0.1s

#18 exporting to image
#18 exporting layers
#18 exporting layers 3.2s done
#18 writing image sha256:8eea420db90959f74aea24180351708e6a35add5d7674d6217842d94d154957b done
#18 naming to docker.io/snoopycrimecop/bioformats:merge_ci done
#18 DONE 3.3s

 [33m1 warning found (use --debug to expand):
[0m - LegacyKeyValueFormat: "ENV key=value" should be used instead of legacy "ENV key value" format (line 30)
Finished: SUCCESS