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Skipping 2,104 KB.. Full Log
#14 418.4 Progress (3): 591 kB | 282 kB | 27 kB
                                     
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/3.0.8/plexus-utils-3.0.8.jar
#14 418.4 Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpcore/4.3.2/httpcore-4.3.2.jar (282 kB at 1.1 MB/s)
#14 418.4 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-interpolation/1.15/plexus-interpolation-1.15.jar
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Downloaded from central: https://repo.maven.apache.org/maven2/org/fusesource/hawtbuf/hawtbuf-proto/1.9/hawtbuf-proto-1.9.jar (27 kB at 104 kB/s)
#14 418.4 Downloading from central: https://repo.maven.apache.org/maven2/org/sonatype/aether/aether-api/1.13.1/aether-api-1.13.1.jar
#14 418.4 Progress (3): 591 kB | 50 kB | 4.1/232 kB
                                         
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpclient/4.3.5/httpclient-4.3.5.jar (591 kB at 2.2 MB/s)
#14 418.4 Progress (2): 50 kB | 8.2/232 kB
                                
Downloading from central: https://repo.maven.apache.org/maven2/ch/qos/logback/logback-core/1.1.2/logback-core-1.1.2.jar
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Downloaded from central: https://repo.maven.apache.org/maven2/org/fusesource/hawtbuf/hawtbuf/1.9/hawtbuf-1.9.jar (50 kB at 187 kB/s)
#14 418.4 Downloading from central: https://repo.maven.apache.org/maven2/ch/qos/logback/logback-classic/1.1.2/logback-classic-1.1.2.jar
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Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-interpolation/1.15/plexus-interpolation-1.15.jar (60 kB at 217 kB/s)
#14 418.4 Progress (3): 232 kB | 90 kB | 70/428 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/3.0.8/plexus-utils-3.0.8.jar (232 kB at 819 kB/s)
#14 418.4 Progress (3): 90 kB | 184/428 kB | 49/271 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/sonatype/aether/aether-api/1.13.1/aether-api-1.13.1.jar (90 kB at 310 kB/s)
#14 418.4 Progress (2): 274/428 kB | 197/271 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/ch/qos/logback/logback-classic/1.1.2/logback-classic-1.1.2.jar (271 kB at 882 kB/s)
#14 418.4 Downloaded from central: https://repo.maven.apache.org/maven2/ch/qos/logback/logback-core/1.1.2/logback-core-1.1.2.jar (428 kB at 1.4 MB/s)
#14 418.6 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/maven-bundle-plugin/2.5.0/maven-bundle-plugin-2.5.0.pom
#14 418.6 Progress (1): 4.1/4.7 kB
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#14 418.6 Downloading from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/bndlib/2.3.0/bndlib-2.3.0.pom
#14 418.6 Progress (1): 1.4 kB
                    
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#14 418.7 Downloading from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/parent/2.3.0/parent-2.3.0.pom
#14 418.7 Progress (1): 4.1/4.1 kB
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#14 418.7 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.core/4.3.1/org.osgi.core-4.3.1.pom
#14 418.7 Progress (1): 1.4 kB
                    
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#14 418.7 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-core/2.0.7/maven-core-2.0.7.pom
#14 418.7 Progress (1): 4.1/6.7 kB
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#14 418.7 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven/2.0.7/maven-2.0.7.pom
#14 418.8 Progress (1): 4.1/11 kB
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#14 418.8 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-parent/5/maven-parent-5.pom
#14 418.8 Progress (1): 4.1/15 kB
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#14 418.8 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-settings/2.0.7/maven-settings-2.0.7.pom
#14 418.8 Progress (1): 2.0 kB
                    
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#14 418.8 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-model/2.0.7/maven-model-2.0.7.pom
#14 418.8 Progress (1): 3.0 kB
                    
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#14 418.8 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-parameter-documenter/2.0.7/maven-plugin-parameter-documenter-2.0.7.pom
#14 418.9 Progress (1): 1.9 kB
                    
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#14 418.9 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/reporting/maven-reporting-api/2.0.7/maven-reporting-api-2.0.7.pom
#14 418.9 Progress (1): 1.8 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/reporting/maven-reporting-api/2.0.7/maven-reporting-api-2.0.7.pom (1.8 kB at 70 kB/s)
#14 418.9 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/reporting/maven-reporting/2.0.7/maven-reporting-2.0.7.pom
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Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-settings/2.0.7/maven-settings-2.0.7.jar (49 kB at 1.5 MB/s)
#14 420.2 Progress (4): 175 kB | 164/350 kB | 153 kB | 0.3/1.8 MB
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Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-parameter-documenter/2.0.7/maven-plugin-parameter-documenter-2.0.7.jar
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Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-core/2.0.7/maven-core-2.0.7.jar (153 kB at 3.6 MB/s)
#14 420.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/reporting/maven-reporting-api/2.0.7/maven-reporting-api-2.0.7.jar
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Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/felix/maven-bundle-plugin/2.5.0/maven-bundle-plugin-2.5.0.jar (175 kB at 3.4 MB/s)
#14 420.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-profile/2.0.7/maven-profile-2.0.7.jar
#14 420.2 Progress (3): 350 kB | 0.8/1.8 MB | 21 kB
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#14 420.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-model/2.0.7/maven-model-2.0.7.jar
#14 420.2 Progress (2): 0.8/1.8 MB | 21 kB
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#14 420.3 Progress (2): 1.0/1.8 MB | 9.9 kB
                                 
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#14 420.3 Progress (2): 1.0/1.8 MB | 9.9 kB
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#14 420.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-repository-metadata/2.0.7/maven-repository-metadata-2.0.7.jar
#14 420.3 Progress (3): 1.1/1.8 MB | 35 kB | 37/86 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-profile/2.0.7/maven-profile-2.0.7.jar (35 kB at 464 kB/s)
#14 420.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-error-diagnostics/2.0.7/maven-error-diagnostics-2.0.7.jar
#14 420.3 Progress (3): 1.4/1.8 MB | 86 kB | 88 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-model/2.0.7/maven-model-2.0.7.jar (86 kB at 1.1 MB/s)
#14 420.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-project/2.0.7/maven-project-2.0.7.jar
#14 420.3 Progress (3): 1.4/1.8 MB | 88 kB | 24 kB
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#14 420.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-registry/2.0.7/maven-plugin-registry-2.0.7.jar
#14 420.3 Progress (2): 1.6/1.8 MB | 24 kB
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#14 420.3 Downloading from central: https://repo.maven.apache.org/maven2/commons-cli/commons-cli/1.0/commons-cli-1.0.jar
#14 420.3 Progress (2): 1.7/1.8 MB | 14 kB
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#14 420.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-api/2.0.7/maven-plugin-api-2.0.7.jar
#14 420.3 Progress (3): 1.8 MB | 117 kB | 19/29 kB
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#14 420.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-descriptor/2.0.7/maven-plugin-descriptor-2.0.7.jar
#14 420.3 Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-project/2.0.7/maven-project-2.0.7.jar (117 kB at 1.0 MB/s)
#14 420.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact-manager/2.0.7/maven-artifact-manager-2.0.7.jar
#14 420.3 Progress (3): 29 kB | 30 kB | 4.1/13 kB
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#14 420.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-monitor/2.0.7/maven-monitor-2.0.7.jar
#14 420.3 Progress (2): 30 kB | 12/13 kB
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#14 420.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-archiver/2.5/maven-archiver-2.5.jar
#14 420.3 Progress (2): 13 kB | 4.1/37 kB
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#14 420.3 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-archiver/2.1/plexus-archiver-2.1.jar
#14 420.3 Progress (4): 37 kB | 57 kB | 10 kB | 4.1/22 kB
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#14 420.3 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-io/2.0.2/plexus-io-2.0.2.jar
#14 420.3 Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact-manager/2.0.7/maven-artifact-manager-2.0.7.jar (57 kB at 409 kB/s)
#14 420.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-dependency-tree/2.1/maven-dependency-tree-2.1.jar
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#14 420.3 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/3.0.10/plexus-utils-3.0.10.jar
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#14 420.4 Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-dependency-tree/2.1/maven-dependency-tree-2.1.jar (60 kB at 363 kB/s)
#14 420.4 Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/3.0.10/plexus-utils-3.0.10.jar (231 kB at 1.3 MB/s)
#14 420.5 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/wagon/wagon-ssh-external/3.5.2/wagon-ssh-external-3.5.2.pom
#14 420.5 Progress (1): 4.1 kB
                    
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#14 420.5 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/wagon/wagon-providers/3.5.2/wagon-providers-3.5.2.pom
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#14 420.6 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/wagon/wagon/3.5.2/wagon-3.5.2.pom
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#14 420.6 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/wagon/wagon-ssh-common/
#14 420.6 [output clipped, log limit 2MiB reached]
#14 512.4 SLF4J: No SLF4J providers were found.
#14 512.4 SLF4J: Defaulting to no-operation (NOP) logger implementation
#14 512.4 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#14 DONE 523.9s

#15 [11/13] WORKDIR /bio-formats-build/bioformats
#15 DONE 0.0s

#16 [12/13] RUN ant jars tools
#16 0.750 Buildfile: /bio-formats-build/bioformats/build.xml
#16 1.203      [echo] isSnapshot = true
#16 1.308 
#16 1.308 copy-jars:
#16 1.308 
#16 1.308 deps-formats-api:
#16 1.389      [echo] isSnapshot = true
#16 1.449 
#16 1.449 install-pom:
#16 1.649 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.0.0-SNAPSHOT/pom-bio-formats-8.0.0-SNAPSHOT.pom
#16 1.655 [resolver:install] Installing ome:pom-bio-formats:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 1.660 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 1.661 
#16 1.661 jar-formats-api:
#16 1.777      [echo] isSnapshot = true
#16 1.959 
#16 1.959 init-title:
#16 1.959      [echo] ----------=========== formats-api ===========----------
#16 1.960 
#16 1.960 init-timestamp:
#16 1.964 
#16 1.964 init:
#16 1.964 
#16 1.964 copy-resources:
#16 1.965     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#16 1.979      [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 1.982 
#16 1.982 compile:
#16 2.164 [resolver:resolve] Resolving artifacts
#16 2.191     [javac] Compiling 53 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.863     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:52: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 2.864     [javac] import loci.common.ReflectedUniverse;
#16 2.864     [javac]                   ^
#16 3.064     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.064     [javac]     int currentIndex = r.getCoreIndex();
#16 3.064     [javac]                         ^
#16 3.064     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.064     [javac]     r.setCoreIndex(coreIndex);
#16 3.064     [javac]      ^
#16 3.064     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.064     [javac]     r.setCoreIndex(currentIndex);
#16 3.064     [javac]      ^
#16 3.165     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.165     [javac]   public void setCoreIndex(int no) {
#16 3.165     [javac]               ^
#16 3.165     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.165     [javac]   public int getCoreIndex() {
#16 3.165     [javac]              ^
#16 3.165     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.165     [javac]   public int coreIndexToSeries(int index)
#16 3.165     [javac]              ^
#16 3.165     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.165     [javac]   public int seriesToCoreIndex(int series)
#16 3.166     [javac]              ^
#16 3.266     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.266     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 3.266     [javac]                             ^
#16 3.266     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.266     [javac]     if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#16 3.266     [javac]                                              ^
#16 3.266     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.266     [javac]     if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#16 3.266     [javac]                                              ^
#16 3.266     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.267     [javac]       core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 3.267     [javac]                                                      ^
#16 3.267     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.267     [javac]       core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#16 3.267     [javac]                                                      ^
#16 3.367     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.367     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#16 3.367     [javac]     ^
#16 3.367     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.367     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#16 3.367     [javac]                               ^
#16 3.468     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:773: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.468     [javac]   public void setCoreIndex(int no) {
#16 3.468     [javac]               ^
#16 3.468     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:767: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.468     [javac]   public int getCoreIndex() {
#16 3.468     [javac]              ^
#16 3.468     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:783: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.468     [javac]   public int coreIndexToSeries(int index) {
#16 3.468     [javac]              ^
#16 3.469     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:778: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.469     [javac]   public int seriesToCoreIndex(int series) {
#16 3.469     [javac]              ^
#16 3.469     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:587: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.469     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 3.469     [javac]                             ^
#16 3.469     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:588: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.469     [javac]     return getReader().getCoreMetadataList();
#16 3.469     [javac]                       ^
#16 3.469     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:768: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.469     [javac]     return getReader().getCoreIndex();
#16 3.469     [javac]                       ^
#16 3.469     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:774: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.470     [javac]     getReader().setCoreIndex(no);
#16 3.470     [javac]                ^
#16 3.470     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:779: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.470     [javac]     return getReader().seriesToCoreIndex(series);
#16 3.470     [javac]                       ^
#16 3.470     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:784: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.470     [javac]     return getReader().coreIndexToSeries(index);
#16 3.470     [javac]                       ^
#16 3.470     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.470     [javac]   public void setCoreIndex(int no) {
#16 3.470     [javac]               ^
#16 3.470     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.470     [javac]   public int getCoreIndex() {
#16 3.470     [javac]              ^
#16 3.470     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.470     [javac]   public int coreIndexToSeries(int index) {
#16 3.470     [javac]              ^
#16 3.471     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.471     [javac]   public int seriesToCoreIndex(int series) {
#16 3.471     [javac]              ^
#16 3.471     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.471     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 3.471     [javac]                             ^
#16 3.571     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 3.571     [javac]     List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 3.571     [javac]                                        ^
#16 3.571     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.571     [javac]     return reader.getCoreIndex();
#16 3.571     [javac]                  ^
#16 3.571     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.572     [javac]     reader.setCoreIndex(no);
#16 3.572     [javac]           ^
#16 3.572     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 3.572     [javac]     return reader.seriesToCoreIndex(series);
#16 3.572     [javac]                  ^
#16 3.572     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 3.572     [javac]     return reader.coreIndexToSeries(index);
#16 3.572     [javac]                  ^
#16 3.672     [javac] Note: Some input files use unchecked or unsafe operations.
#16 3.672     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 3.672     [javac] 35 warnings
#16 3.684 
#16 3.684 formats-api.jar:
#16 3.685     [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#16 3.711       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#16 3.743 [resolver:install] Using default POM (ome:formats-api:8.0.0-SNAPSHOT)
#16 3.748 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.pom
#16 3.750 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.jar
#16 3.751 [resolver:install] Installing ome:formats-api:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 3.754 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 3.754 
#16 3.754 deps-turbojpeg:
#16 3.755 
#16 3.755 jar-turbojpeg:
#16 3.863      [echo] isSnapshot = true
#16 4.036 
#16 4.036 init-title:
#16 4.036      [echo] ----------=========== turbojpeg ===========----------
#16 4.036 
#16 4.036 init-timestamp:
#16 4.036 
#16 4.036 init:
#16 4.036 
#16 4.036 copy-resources:
#16 4.037     [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 4.038 
#16 4.038 compile:
#16 4.049 [resolver:resolve] Resolving artifacts
#16 4.053     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 4.760 
#16 4.760 jar:
#16 4.765       [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#16 4.952 [resolver:install] Using default POM (ome:turbojpeg:8.0.0-SNAPSHOT)
#16 4.961 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.pom
#16 4.963 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.jar
#16 4.965 [resolver:install] Installing ome:turbojpeg:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 4.969 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 4.970 
#16 4.970 deps-formats-bsd:
#16 4.970 
#16 4.970 jar-formats-bsd:
#16 5.073      [echo] isSnapshot = true
#16 5.246 
#16 5.246 init-title:
#16 5.247      [echo] ----------=========== formats-bsd ===========----------
#16 5.247 
#16 5.247 init-timestamp:
#16 5.247 
#16 5.247 init:
#16 5.247 
#16 5.247 copy-resources:
#16 5.247     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 5.251      [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 5.252 
#16 5.252 compile:
#16 5.458 [resolver:resolve] Resolving artifacts
#16 5.492     [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 6.401     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:45: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 6.401     [javac] import loci.common.ReflectedUniverse;
#16 6.401     [javac]                   ^
#16 6.802     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.802     [javac]       core.size() != reader.getCoreMetadataList().size())
#16 6.802     [javac]                            ^
#16 6.802     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.802     [javac]       List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 6.802     [javac]                                          ^
#16 6.902     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.902     [javac]     int n = reader.getCoreMetadataList().size();
#16 6.902     [javac]                   ^
#16 6.902     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.902     [javac]     reader.setCoreIndex(coreIndex);
#16 6.902     [javac]           ^
#16 6.902     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.902     [javac]     int n = reader.getCoreMetadataList().size();
#16 6.902     [javac]                   ^
#16 6.903     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.903     [javac]     int n = reader.getCoreMetadataList().size();
#16 6.903     [javac]                   ^
#16 6.903     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 6.903     [javac]     if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#16 6.903     [javac]                                         ^
#16 6.903     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.903     [javac]     int n = reader.getCoreMetadataList().size();
#16 6.903     [javac]                   ^
#16 6.903     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 6.903     [javac]     if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#16 6.903     [javac]                                         ^
#16 6.903     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.903     [javac]     int n = reader.getCoreMetadataList().size();
#16 6.903     [javac]                   ^
#16 6.903     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.903     [javac]     if (n > 1 || noStitch) reader.setCoreIndex(no);
#16 6.903     [javac]                                  ^
#16 6.903     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 6.903     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 6.903     [javac]                  ^
#16 6.903     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 6.903     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 6.903     [javac]                                              ^
#16 6.903     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.903     [javac]     return noStitch ? reader.getCoreMetadataList() : core;
#16 6.903     [javac]                             ^
#16 6.903     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.903     [javac]     if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#16 6.904     [javac]               ^
#16 6.904     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.904     [javac]       seriesCount = reader.getCoreMetadataList().size();
#16 6.904     [javac]                           ^
#16 6.904     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.904     [javac]       if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#16 6.904     [javac]                 ^
#16 6.904     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.904     [javac]     if (reader.getCoreMetadataList().size() > 1) return 0;
#16 6.904     [javac]               ^
#16 6.904     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.904     [javac]       r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#16 6.904     [javac]                            ^
#16 7.004     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 7.004     [javac]     int seriesCount = unwrap().getCoreMetadataList().size();
#16 7.004     [javac]                               ^
#16 7.104     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 7.104     [javac]     BitWriter out = new BitWriter();
#16 7.104     [javac]     ^
#16 7.105     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 7.105     [javac]     BitWriter out = new BitWriter();
#16 7.105     [javac]                         ^
#16 8.005     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:618: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.005     [javac]       OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#16 8.006     [javac]                                                                    ^
#16 8.006     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#16 8.006     [javac]     StreamTokenizer st = new StreamTokenizer(in);
#16 8.006     [javac]                          ^
#16 8.106     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.106     [javac]     core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 8.106     [javac]                                                    ^
#16 8.106     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 8.106     [javac]   protected ReflectedUniverse r;
#16 8.106     [javac]             ^
#16 8.106     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 8.106     [javac]       r = new ReflectedUniverse();
#16 8.106     [javac]               ^
#16 8.106     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:992: warning: [deprecation] NM in UNITS has been deprecated
#16 8.106     [javac]           wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#16 8.106     [javac]                                                                               ^
#16 8.106     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1024: warning: [deprecation] MM in UNITS has been deprecated
#16 8.106     [javac]           sliceThickness.value = padString(String.valueOf(physicalZ.value(UNITS.MM)));
#16 8.106     [javac]                                                                                ^
#16 8.106     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1037: warning: [deprecation] MM in UNITS has been deprecated
#16 8.106     [javac]         String px = physicalX == null ? "1" : String.valueOf(physicalX.value(UNITS.MM));
#16 8.106     [javac]                                                                                   ^
#16 8.106     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1038: warning: [deprecation] MM in UNITS has been deprecated
#16 8.106     [javac]         String py = physicalY == null ? "1" : String.valueOf(physicalY.value(UNITS.MM));
#16 8.106     [javac]                                                                                   ^
#16 8.106     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1057: warning: [deprecation] MM in UNITS has been deprecated
#16 8.106     [javac]         volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#16 8.106     [javac]                                                                                        ^
#16 8.107     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1061: warning: [deprecation] MM in UNITS has been deprecated
#16 8.107     [javac]         volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#16 8.107     [javac]                                                                                         ^
#16 8.107     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1067: warning: [deprecation] MM in UNITS has been deprecated
#16 8.107     [javac]         volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#16 8.107     [javac]                                                                                        ^
#16 8.107     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1115: warning: [deprecation] MM in UNITS has been deprecated
#16 8.107     [javac]             offsetX.value = padString(physicalX == null ? "0" : padString(String.valueOf(physicalX.value(UNITS.MM).floatValue() * width)));
#16 8.107     [javac]                                                                                                               ^
#16 8.107     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1119: warning: [deprecation] MM in UNITS has been deprecated
#16 8.107     [javac]             offsetY.value = padString(physicalY == null ? "0" : padString(String.valueOf(physicalY.value(UNITS.MM).floatValue() * height)));
#16 8.107     [javac]                                                                                                               ^
#16 8.207     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#16 8.207     [javac]       libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#16 8.207     [javac]                                        ^
#16 8.308     [javac] Note: Some input files use unchecked or unsafe operations.
#16 8.308     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 8.308     [javac] 38 warnings
#16 8.334 
#16 8.334 formats-bsd.jar:
#16 8.343       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#16 8.456 [resolver:install] Using default POM (ome:formats-bsd:8.0.0-SNAPSHOT)
#16 8.461 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.pom
#16 8.466 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.jar
#16 8.468 [resolver:install] Installing ome:formats-bsd:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 8.470 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 8.471 
#16 8.471 deps-formats-gpl:
#16 8.471 
#16 8.471 jar-formats-gpl:
#16 8.570      [echo] isSnapshot = true
#16 8.744 
#16 8.744 init-title:
#16 8.745      [echo] ----------=========== formats-gpl ===========----------
#16 8.745 
#16 8.745 init-timestamp:
#16 8.745 
#16 8.745 init:
#16 8.745 
#16 8.745 copy-resources:
#16 8.745     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 8.747      [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 8.747 
#16 8.747 compile:
#16 8.982 [resolver:resolve] Resolving artifacts
#16 9.247 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar
#16 9.247 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar
#16 9.583 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar
#16 9.583 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar
#16 9.639 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar (0 B at 0.0 KB/sec)
#16 9.639 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar (0 B at 0.0 KB/sec)
#16 9.659     [javac] Compiling 173 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 10.87     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:50: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 10.87     [javac] import loci.formats.codec.BitWriter;
#16 10.87     [javac]                          ^
#16 10.97     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:43: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 10.97     [javac] import loci.formats.codec.BitWriter;
#16 10.97     [javac]                          ^
#16 12.57     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:1321: warning: non-varargs call of varargs method with inexact argument type for last parameter;
#16 12.57     [javac]       LOGGER.trace("Parsing tokens: {}", tokens);
#16 12.57     [javac]                                          ^
#16 12.57     [javac]   cast to Object for a varargs call
#16 12.57     [javac]   cast to Object[] for a non-varargs call and to suppress this warning
#16 12.57     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1257: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 12.57     [javac]     BitWriter bits = null;
#16 12.57     [javac]     ^
#16 12.57     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1259: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 12.57     [javac]       bits = new BitWriter(planes[index].length / 8);
#16 12.57     [javac]                  ^
#16 12.87     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java:196: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 12.87     [javac]     CoreMetadata ms = new CoreMetadata(helperReader.getCoreMetadataList().get(0));
#16 12.87     [javac]                                                    ^
#16 13.17     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 13.17     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 13.17     [javac]     ^
#16 13.17     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 13.17     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 13.17     [javac]                          ^
#16 13.57     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:199: warning: [deprecation] getAttributes() in Variable has been deprecated
#16 13.57     [javac]       List<Attribute> attributes = variable.getAttributes();
#16 13.57     [javac]                                            ^
#16 13.57     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:201: warning: [deprecation] getName() in CDMNode has been deprecated
#16 13.57     [javac]         toReturn.put(attribute.getName(), arrayToString(attribute.getValues()));
#16 13.57     [javac]                               ^
#16 13.57     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:237: warning: [deprecation] getName() in CDMNode has been deprecated
#16 13.57     [javac]       String groupName = group.getName();
#16 13.57     [javac]                               ^
#16 13.57     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:238: warning: [deprecation] getAttributes() in Group has been deprecated
#16 13.57     [javac]       List<Attribute> attributes = group.getAttributes();
#16 13.57     [javac]                                         ^
#16 13.57     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:240: warning: [deprecation] getName() in CDMNode has been deprecated
#16 13.57     [javac]         String attributeName = attribute.getName();
#16 13.57     [javac]                                         ^
#16 13.57     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:246: warning: [deprecation] getName() in CDMNode has been deprecated
#16 13.57     [javac]         String variableName = variable.getName();
#16 13.57     [javac]                                       ^
#16 13.57     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:310: warning: [deprecation] open(String) in NetcdfFile has been deprecated
#16 13.57     [javac]     netCDFFile = NetcdfFile.open(currentId);
#16 13.57     [javac]                            ^
#16 13.57     [javac] Note: Some input files use unchecked or unsafe operations.
#16 13.57     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 13.57     [javac] 15 warnings
#16 13.64 
#16 13.64 formats-gpl.jar:
#16 13.65       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#16 13.79 [resolver:install] Using default POM (ome:formats-gpl:8.0.0-SNAPSHOT)
#16 13.79 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.pom
#16 13.80 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.jar
#16 13.80 [resolver:install] Installing ome:formats-gpl:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 13.80 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 13.80 
#16 13.80 deps-bio-formats-plugins:
#16 13.80 
#16 13.80 jar-bio-formats-plugins:
#16 13.90      [echo] isSnapshot = true
#16 14.07 
#16 14.07 init-title:
#16 14.07      [echo] ----------=========== bio-formats_plugins ===========----------
#16 14.07 
#16 14.07 init-timestamp:
#16 14.07 
#16 14.07 init:
#16 14.07 
#16 14.07 copy-resources:
#16 14.07     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 14.08      [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 14.08 
#16 14.08 compile:
#16 14.33 [resolver:resolve] Resolving artifacts
#16 14.35     [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 15.15     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:39: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 15.15     [javac] import loci.common.ReflectedUniverse;
#16 15.15     [javac]                   ^
#16 15.15     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:40: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 15.15     [javac] import loci.common.ReflectedUniverse;
#16 15.15     [javac]                   ^
#16 15.65     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:51: warning: [deprecation] STABLE_VERSION in UpgradeChecker has been deprecated
#16 15.65     [javac]     "Stable build (" + UpgradeChecker.STABLE_VERSION + ")";
#16 15.65     [javac]                                      ^
#16 15.76     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 15.76     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#16 15.76     [javac]         ^
#16 15.76     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 15.76     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#16 15.76     [javac]                                   ^
#16 15.86     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 15.86     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#16 15.86     [javac]     ^
#16 15.86     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 15.86     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#16 15.86     [javac]                                ^
#16 16.12     [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#16 16.12     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 16.12     [javac] 7 warnings
#16 16.12 
#16 16.12 bio-formats-plugins.jar:
#16 16.13       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#16 16.16 [resolver:install] Using default POM (ome:bio-formats_plugins:8.0.0-SNAPSHOT)
#16 16.17 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.pom
#16 16.17 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.jar
#16 16.17 [resolver:install] Installing ome:bio-formats_plugins:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 16.17 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 16.17 
#16 16.17 deps-bio-formats-tools:
#16 16.17 
#16 16.17 jar-bio-formats-tools:
#16 16.28      [echo] isSnapshot = true
#16 16.46 
#16 16.46 init-title:
#16 16.46      [echo] ----------=========== bio-formats-tools ===========----------
#16 16.46 
#16 16.46 init-timestamp:
#16 16.46 
#16 16.46 init:
#16 16.46 
#16 16.46 copy-resources:
#16 16.46     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 16.46 
#16 16.46 compile:
#16 16.71 [resolver:resolve] Resolving artifacts
#16 16.73     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 17.77 
#16 17.77 bio-formats-tools.jar:
#16 17.77       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#16 17.78 [resolver:install] Using default POM (ome:bio-formats-tools:8.0.0-SNAPSHOT)
#16 17.78 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.pom
#16 17.79 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.jar
#16 17.79 [resolver:install] Installing ome:bio-formats-tools:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 17.79 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 17.79 
#16 17.79 deps-tests:
#16 17.79 
#16 17.79 jar-tests:
#16 17.89      [echo] isSnapshot = true
#16 18.07 
#16 18.07 init-title:
#16 18.07      [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 18.07 
#16 18.07 init-timestamp:
#16 18.07 
#16 18.07 init:
#16 18.07 
#16 18.07 copy-resources:
#16 18.07     [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#16 18.07 
#16 18.07 compile:
#16 18.44 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15.pom
#16 18.53 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15.pom
#16 18.54 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15.pom
#16 19.10 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15.pom
#16 19.55 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15.pom (0 B at 0.0 KB/sec)
#16 19.58 [resolver:resolve] Resolving artifacts
#16 19.59 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15-jar-with-dependencies.jar
#16 19.63 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15-jar-with-dependencies.jar
#16 19.65 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15-jar-with-dependencies.jar
#16 20.05 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15-jar-with-dependencies.jar
#16 20.32 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.15/file-leak-detector-1.15-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#16 20.33     [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#16 21.25     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:605: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 21.25     [javac]         int index = unflattenedReader.getCoreIndex();
#16 21.25     [javac]                                      ^
#16 21.25     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:606: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 21.25     [javac]         reader.setCoreIndex(index);
#16 21.25     [javac]               ^
#16 21.45     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2247: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 21.45     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#16 21.45     [javac]                                              ^
#16 21.45     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2413: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 21.45     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#16 21.45     [javac]                                              ^
#16 21.75     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 21.75     [javac]         FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#16 21.75     [javac]                                                    ^
#16 21.75     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 21.75     [javac]         FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#16 21.75     [javac]                                                    ^
#16 21.75     [javac] Note: Some input files use unchecked or unsafe operations.
#16 21.75     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 21.75     [javac] 6 warnings
#16 21.76 
#16 21.76 tests.jar:
#16 21.76       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#16 21.77 [resolver:install] Using default POM (ome:test-suite:8.0.0-SNAPSHOT)
#16 21.78 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/test-suite-8.0.0-SNAPSHOT.pom
#16 21.78 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/test-suite-8.0.0-SNAPSHOT.jar
#16 21.78 [resolver:install] Installing ome:test-suite:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 21.78 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 21.79 
#16 21.79 jars:
#16 21.79 
#16 21.79 copy-jars:
#16 21.79 
#16 21.79 deps-formats-api:
#16 21.84      [echo] isSnapshot = true
#16 21.89 
#16 21.89 install-pom:
#16 22.06 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.0.0-SNAPSHOT/pom-bio-formats-8.0.0-SNAPSHOT.pom
#16 22.07 [resolver:install] Installing ome:pom-bio-formats:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 22.07 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 22.07 
#16 22.07 jar-formats-api:
#16 22.17      [echo] isSnapshot = true
#16 22.35 
#16 22.35 init-title:
#16 22.35      [echo] ----------=========== formats-api ===========----------
#16 22.35 
#16 22.35 init-timestamp:
#16 22.35 
#16 22.35 init:
#16 22.35 
#16 22.35 copy-resources:
#16 22.35 
#16 22.35 compile:
#16 22.51 [resolver:resolve] Resolving artifacts
#16 22.52 
#16 22.52 formats-api.jar:
#16 22.54 [resolver:install] Using default POM (ome:formats-api:8.0.0-SNAPSHOT)
#16 22.54 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.pom
#16 22.55 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.jar
#16 22.55 [resolver:install] Installing ome:formats-api:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 22.55 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 22.55 
#16 22.55 deps-turbojpeg:
#16 22.55 
#16 22.55 jar-turbojpeg:
#16 22.82      [echo] isSnapshot = true
#16 22.99 
#16 22.99 init-title:
#16 22.99      [echo] ----------=========== turbojpeg ===========----------
#16 22.99 
#16 22.99 init-timestamp:
#16 22.99 
#16 22.99 init:
#16 22.99 
#16 22.99 copy-resources:
#16 22.99 
#16 22.99 compile:
#16 23.00 [resolver:resolve] Resolving artifacts
#16 23.00 
#16 23.00 jar:
#16 23.01 [resolver:install] Using default POM (ome:turbojpeg:8.0.0-SNAPSHOT)
#16 23.01 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.pom
#16 23.01 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.jar
#16 23.02 [resolver:install] Installing ome:turbojpeg:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 23.02 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 23.02 
#16 23.02 deps-formats-bsd:
#16 23.02 
#16 23.02 jar-formats-bsd:
#16 23.11      [echo] isSnapshot = true
#16 23.27 
#16 23.27 init-title:
#16 23.27      [echo] ----------=========== formats-bsd ===========----------
#16 23.27 
#16 23.27 init-timestamp:
#16 23.27 
#16 23.27 init:
#16 23.27 
#16 23.27 copy-resources:
#16 23.28 
#16 23.28 compile:
#16 23.46 [resolver:resolve] Resolving artifacts
#16 23.48 
#16 23.48 formats-bsd.jar:
#16 23.51 [resolver:install] Using default POM (ome:formats-bsd:8.0.0-SNAPSHOT)
#16 23.52 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.pom
#16 23.52 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.jar
#16 23.52 [resolver:install] Installing ome:formats-bsd:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 23.53 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 23.53 
#16 23.53 deps-formats-gpl:
#16 23.53 
#16 23.53 jar-formats-gpl:
#16 23.66      [echo] isSnapshot = true
#16 23.83 
#16 23.83 init-title:
#16 23.83      [echo] ----------=========== formats-gpl ===========----------
#16 23.83 
#16 23.83 init-timestamp:
#16 23.83 
#16 23.83 init:
#16 23.83 
#16 23.83 copy-resources:
#16 23.84 
#16 23.84 compile:
#16 24.06 [resolver:resolve] Resolving artifacts
#16 24.08 
#16 24.08 formats-gpl.jar:
#16 24.12 [resolver:install] Using default POM (ome:formats-gpl:8.0.0-SNAPSHOT)
#16 24.12 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.pom
#16 24.12 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.jar
#16 24.12 [resolver:install] Installing ome:formats-gpl:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 24.13 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 24.13 
#16 24.13 deps-bio-formats-plugins:
#16 24.13 
#16 24.13 jar-bio-formats-plugins:
#16 24.21      [echo] isSnapshot = true
#16 24.38 
#16 24.38 init-title:
#16 24.38      [echo] ----------=========== bio-formats_plugins ===========----------
#16 24.38 
#16 24.38 init-timestamp:
#16 24.38 
#16 24.38 init:
#16 24.38 
#16 24.38 copy-resources:
#16 24.38 
#16 24.38 compile:
#16 24.64 [resolver:resolve] Resolving artifacts
#16 24.65 
#16 24.65 bio-formats-plugins.jar:
#16 24.67 [resolver:install] Using default POM (ome:bio-formats_plugins:8.0.0-SNAPSHOT)
#16 24.67 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.pom
#16 24.68 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.jar
#16 24.68 [resolver:install] Installing ome:bio-formats_plugins:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 24.68 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 24.68 
#16 24.68 deps-bio-formats-tools:
#16 24.68 
#16 24.68 jar-bio-formats-tools:
#16 24.78      [echo] isSnapshot = true
#16 24.96 
#16 24.96 init-title:
#16 24.96      [echo] ----------=========== bio-formats-tools ===========----------
#16 24.96 
#16 24.96 init-timestamp:
#16 24.96 
#16 24.96 init:
#16 24.96 
#16 24.96 copy-resources:
#16 24.96 
#16 24.96 compile:
#16 25.25 [resolver:resolve] Resolving artifacts
#16 25.27 
#16 25.27 bio-formats-tools.jar:
#16 25.27 [resolver:install] Using default POM (ome:bio-formats-tools:8.0.0-SNAPSHOT)
#16 25.28 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.pom
#16 25.28 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.jar
#16 25.28 [resolver:install] Installing ome:bio-formats-tools:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 25.28 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 25.28 
#16 25.28 deps-tests:
#16 25.28 
#16 25.28 jar-tests:
#16 25.38      [echo] isSnapshot = true
#16 25.57 
#16 25.57 init-title:
#16 25.57      [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 25.57 
#16 25.57 init-timestamp:
#16 25.57 
#16 25.57 init:
#16 25.57 
#16 25.57 copy-resources:
#16 25.57 
#16 25.57 compile:
#16 25.84 [resolver:resolve] Resolving artifacts
#16 25.86 
#16 25.86 tests.jar:
#16 25.87 [resolver:install] Using default POM (ome:test-suite:8.0.0-SNAPSHOT)
#16 25.87 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/test-suite-8.0.0-SNAPSHOT.pom
#16 25.87 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/test-suite-8.0.0-SNAPSHOT.jar
#16 25.87 [resolver:install] Installing ome:test-suite:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 25.88 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 25.88 
#16 25.88 jars:
#16 25.88 
#16 25.88 tools:
#16 25.88      [echo] ----------=========== bioformats_package ===========----------
#16 25.98      [echo] isSnapshot = true
#16 26.17 
#16 26.17 init-timestamp:
#16 26.17 
#16 26.17 bundle:
#16 26.48 [resolver:resolve] Resolving artifacts
#16 26.49     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 26.54     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.0.23-SNAPSHOT/ome-common-6.0.23-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 26.56     [unzip] Expanding: /home/build/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 26.59     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 26.59     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 26.66     [unzip] Expanding: /home/build/.m2/repository/xpp3/xpp3/1.1.4c/xpp3-1.1.4c.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 26.68     [unzip] Expanding: /home/build/.m2/repository/com/squareup/okhttp3/okhttp/3.7.0/okhttp-3.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 26.73     [unzip] Expanding: /home/build/.m2/repository/com/squareup/okio/okio/1.12.0/okio-1.12.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 26.74     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-databind/2.14.2/jackson-databind-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 26.98     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.14.2/jackson-core-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.03     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.14.2/jackson-annotations-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.05     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/kryo/5.4.0/kryo-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.11     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/reflectasm/1.11.9/reflectasm-1.11.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.12     [unzip] Expanding: /home/build/.m2/repository/org/objenesis/objenesis/3.3/objenesis-3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.13     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/minlog/1.3.1/minlog-1.3.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.14     [unzip] Expanding: /home/build/.m2/repository/joda-time/joda-time/2.12.2/joda-time-2.12.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.32     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/guava/32.0.0-jre/guava-32.0.0-jre.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.84     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/failureaccess/1.0.1/failureaccess-1.0.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.84     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/listenablefuture/9999.0-empty-to-avoid-conflict-with-guava/listenablefuture-9999.0-empty-to-avoid-conflict-with-guava.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.84     [unzip] Expanding: /home/build/.m2/repository/com/google/code/findbugs/jsr305/3.0.2/jsr305-3.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.85     [unzip] Expanding: /home/build/.m2/repository/org/checkerframework/checker-qual/3.33.0/checker-qual-3.33.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.95     [unzip] Expanding: /home/build/.m2/repository/com/google/errorprone/error_prone_annotations/2.18.0/error_prone_annotations-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 27.95     [unzip] Expanding: /home/build/.m2/repository/com/google/j2objc/j2objc-annotations/2.8/j2objc-annotations-2.8.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.02     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-xml/6.3.7-SNAPSHOT/ome-xml-6.3.7-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.08     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/specification/6.3.7-SNAPSHOT/specification-6.3.7-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.14     [unzip] Expanding: /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.16     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-codecs/1.0.4-SNAPSHOT/ome-codecs-1.0.4-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.17     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-jai/0.1.5-SNAPSHOT/ome-jai-0.1.5-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.53     [unzip] Expanding: /home/build/.m2/repository/io/airlift/aircompressor/0.27/aircompressor-0.27.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.57     [unzip] Expanding: /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.65     [unzip] Expanding: /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.69     [unzip] Expanding: /home/build/.m2/repository/org/scijava/native-lib-loader/2.4.0/native-lib-loader-2.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.69     [unzip] Expanding: /home/build/.m2/repository/commons-lang/commons-lang/2.6/commons-lang-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.73     [unzip] Expanding: /home/build/.m2/repository/org/perf4j/perf4j/0.9.16/perf4j-0.9.16.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.75     [unzip] Expanding: /home/build/.m2/repository/cisd/jhdf5/19.04.1/jhdf5-19.04.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.21     [unzip] Expanding: /home/build/.m2/repository/cisd/base/18.09.0/base-18.09.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.24     [unzip] Expanding: /home/build/.m2/repository/commons-io/commons-io/2.6/commons-io-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.27     [unzip] Expanding: /home/build/.m2/repository/org/apache/commons/commons-lang3/3.7/commons-lang3-3.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.34     [unzip] Expanding: /home/build/.m2/repository/com/drewnoakes/metadata-extractor/2.18.0/metadata-extractor-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.45     [unzip] Expanding: /home/build/.m2/repository/com/adobe/xmp/xmpcore/6.1.11/xmpcore-6.1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.47     [unzip] Expanding: /home/build/.m2/repository/ome/jxrlib-all/0.2.4/jxrlib-all-0.2.4.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.49     [unzip] Expanding: /home/build/.m2/repository/org/json/json/20231013/json-20231013.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.50     [unzip] Expanding: /home/build/.m2/repository/xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.81     [unzip] Expanding: /home/build/.m2/repository/xml-apis/xml-apis/1.4.01/xml-apis-1.4.01.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.88     [unzip] Expanding: /home/build/.m2/repository/org/yaml/snakeyaml/2.0/snakeyaml-2.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.94     [unzip] Expanding: /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.04     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/ome-mdbtools-5.3.4-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.06     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/metakit/5.3.8-SNAPSHOT/metakit-5.3.8-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.06     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/ome-poi-5.3.10-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.19     [unzip] Expanding: /home/build/.m2/repository/commons-logging/commons-logging/1.2/commons-logging-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.20     [unzip] Expanding: /home/build/.m2/repository/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.66     [unzip] Expanding: /home/build/.m2/repository/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.67     [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpclient/4.5.9/httpclient-4.5.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.79     [unzip] Expanding: /home/build/.m2/repository/commons-codec/commons-codec/1.11/commons-codec-1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.85     [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpmime/4.5.9/httpmime-4.5.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.86     [unzip] Expanding: /home/build/.m2/repository/com/google/re2j/re2j/1.3/re2j-1.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.87     [unzip] Expanding: /home/build/.m2/repository/org/xerial/sqlite-jdbc/3.28.0/sqlite-jdbc-3.28.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.03     [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-forms/1.7.2/jgoodies-forms-1.7.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.05     [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-common/1.7.0/jgoodies-common-1.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.06     [unzip] Expanding: /home/build/.m2/repository/org/slf4j/slf4j-api/2.0.9/slf4j-api-2.0.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.07     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.08     [unzip] Expanding: /home/build/.m2/repository/xalan/serializer/2.7.3/serializer-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.11     [unzip] Expanding: /home/build/.m2/repository/xalan/xalan/2.7.3/xalan-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.51     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-core/1.3.14/logback-core-1.3.14.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.63     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-classic/1.3.14/logback-classic-1.3.14.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.95       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#16 37.94    [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 38.56 [resolver:install] Using default POM (ome:bioformats_package:8.0.0-SNAPSHOT)
#16 38.57 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/8.0.0-SNAPSHOT/bioformats_package-8.0.0-SNAPSHOT.pom
#16 38.57 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/8.0.0-SNAPSHOT/bioformats_package-8.0.0-SNAPSHOT.jar
#16 38.61 [resolver:install] Installing ome:bioformats_package:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 38.61 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#16 38.62 
#16 38.62 BUILD SUCCESSFUL
#16 38.62 Total time: 37 seconds
#16 DONE 39.6s

#17 [13/13] WORKDIR /bio-formats-build/bioformats/components/test-suite
#17 DONE 0.1s

#18 exporting to image
#18 exporting layers
#18 exporting layers 3.2s done
#18 writing image sha256:662f05dea232a170c565f469222c849a3be7cdb0e288c66da5a78211c4e060b6 done
#18 naming to docker.io/snoopycrimecop/bioformats:merge_ci done
#18 DONE 3.4s

 1 warning found (use --debug to expand):
 - LegacyKeyValueFormat: "ENV key=value" should be used instead of legacy "ENV key value" format (line 30)
Finished: SUCCESS