Console Output

Skipping 2,122 KB.. Full Log
#14 305.8 [[1;34mINFO[m] 
#14 305.8 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mformats-gpl[0;1m ---[m
#14 305.8 [[1;34mINFO[m] 
#14 305.8 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mformats-gpl[0;1m ---[m
#14 305.8 [[1;34mINFO[m] 
#14 305.8 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 305.8 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 305.8 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 305.8 [[1;34mINFO[m] Storing buildNumber: 67919a20c70e73c476924ff1cffc6e10afdfca2f at timestamp: 1735085831288
#14 305.8 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 305.8 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 305.8 
#14 305.8 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 305.8 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 305.8 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 305.8 [[1;34mINFO[m] 
#14 305.8 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:resources[m [1m(default-resources)[m @ [36mformats-gpl[0;1m ---[m
#14 305.8 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 305.8 [[1;34mINFO[m] Copying 2 resources
#14 305.8 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/formats-gpl/lib
#14 305.8 [[1;34mINFO[m] Copying 0 resource
#14 305.8 [[1;34mINFO[m] Copying 1 resource
#14 305.8 [[1;34mINFO[m] 
#14 305.8 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:compile[m [1m(default-compile)[m @ [36mformats-gpl[0;1m ---[m
#14 305.8 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 305.8 [[1;34mINFO[m] Compiling 175 source files to /bio-formats-build/bioformats/components/formats-gpl/target/classes
#14 308.1 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Some input files use or override a deprecated API.
#14 308.1 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Recompile with -Xlint:deprecation for details.
#14 308.1 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Some input files use unchecked or unsafe operations.
#14 308.1 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Recompile with -Xlint:unchecked for details.
#14 308.1 [[1;34mINFO[m] 
#14 308.1 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mformats-gpl[0;1m ---[m
#14 308.1 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 308.1 [[1;34mINFO[m] Copying 24 resources
#14 308.1 [[1;34mINFO[m] 
#14 308.1 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mformats-gpl[0;1m ---[m
#14 308.1 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 308.1 [[1;34mINFO[m] Compiling 23 source files to /bio-formats-build/bioformats/components/formats-gpl/target/test-classes
#14 308.3 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java uses unchecked or unsafe operations.
#14 308.3 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: Recompile with -Xlint:unchecked for details.
#14 308.3 [[1;34mINFO[m] 
#14 308.3 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mformats-gpl[0;1m ---[m
#14 308.3 [[1;34mINFO[m] 
#14 308.3 [[1;34mINFO[m] -------------------------------------------------------
#14 308.3 [[1;34mINFO[m]  T E S T S
#14 308.3 [[1;34mINFO[m] -------------------------------------------------------
#14 308.4 [[1;34mINFO[m] Running [1mTestSuite[m
#14 309.7 2024-12-25 00:17:15,186 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@66f66866 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 309.7 2024-12-25 00:17:15,189 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@4f8caaf3 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 309.7 2024-12-25 00:17:15,246 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@4287d447 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 309.7 2024-12-25 00:17:15,246 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@3af37506 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 309.8 2024-12-25 00:17:15,297 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@7dcc91fd reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 309.8 2024-12-25 00:17:15,297 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@36453307 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 309.8 2024-12-25 00:17:15,343 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@49b07ee3 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 309.8 2024-12-25 00:17:15,343 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@383f3558 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 309.9 2024-12-25 00:17:15,388 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@13e698c7 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 309.9 2024-12-25 00:17:15,388 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@5a4c638d reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 309.9 2024-12-25 00:17:15,443 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@17ae7628 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 309.9 2024-12-25 00:17:15,444 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@1136b469 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 310.0 2024-12-25 00:17:15,484 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@201aa8c1 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 310.0 2024-12-25 00:17:15,484 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@5d58c727 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 310.0 2024-12-25 00:17:15,520 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@21719a0 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 310.0 2024-12-25 00:17:15,520 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@76b224cd reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 310.3 [[1;34mINFO[m] [1;32mTests run: [0;1;32m99[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.802 s - in [1mTestSuite[m
#14 310.6 [[1;34mINFO[m] 
#14 310.6 [[1;34mINFO[m] Results:
#14 310.6 [[1;34mINFO[m] 
#14 310.6 [[1;34mINFO[m] [1;32mTests run: 99, Failures: 0, Errors: 0, Skipped: 0[m
#14 310.6 [[1;34mINFO[m] 
#14 310.6 [[1;34mINFO[m] 
#14 310.6 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-mdb-test)[m @ [36mformats-gpl[0;1m ---[m
#14 310.6 [[1;34mINFO[m] 
#14 310.6 [[1;34mINFO[m] -------------------------------------------------------
#14 310.6 [[1;34mINFO[m]  T E S T S
#14 310.6 [[1;34mINFO[m] -------------------------------------------------------
#14 310.7 [[1;34mINFO[m] Running [1mTestSuite[m
#14 311.1 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.406 s - in [1mTestSuite[m
#14 311.5 [[1;34mINFO[m] 
#14 311.5 [[1;34mINFO[m] Results:
#14 311.5 [[1;34mINFO[m] 
#14 311.5 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 311.5 [[1;34mINFO[m] 
#14 311.5 [[1;34mINFO[m] 
#14 311.5 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-poi-test)[m @ [36mformats-gpl[0;1m ---[m
#14 311.5 [[1;34mINFO[m] 
#14 311.5 [[1;34mINFO[m] -------------------------------------------------------
#14 311.5 [[1;34mINFO[m]  T E S T S
#14 311.5 [[1;34mINFO[m] -------------------------------------------------------
#14 311.6 [[1;34mINFO[m] Running [1mTestSuite[m
#14 312.0 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.402 s - in [1mTestSuite[m
#14 312.4 [[1;34mINFO[m] 
#14 312.4 [[1;34mINFO[m] Results:
#14 312.4 [[1;34mINFO[m] 
#14 312.4 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 312.4 [[1;34mINFO[m] 
#14 312.4 [[1;34mINFO[m] 
#14 312.4 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-netcdf-test)[m @ [36mformats-gpl[0;1m ---[m
#14 312.4 [[1;34mINFO[m] 
#14 312.4 [[1;34mINFO[m] -------------------------------------------------------
#14 312.4 [[1;34mINFO[m]  T E S T S
#14 312.4 [[1;34mINFO[m] -------------------------------------------------------
#14 312.5 [[1;34mINFO[m] Running [1mTestSuite[m
#14 312.9 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.413 s - in [1mTestSuite[m
#14 313.2 [[1;34mINFO[m] 
#14 313.2 [[1;34mINFO[m] Results:
#14 313.2 [[1;34mINFO[m] 
#14 313.2 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 313.2 [[1;34mINFO[m] 
#14 313.2 [[1;34mINFO[m] 
#14 313.2 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mformats-gpl[0;1m ---[m
#14 313.3 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.1.0-SNAPSHOT.jar
#14 313.3 [[1;34mINFO[m] 
#14 313.3 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mformats-gpl[0;1m >>>[m
#14 313.3 [[1;34mINFO[m] 
#14 313.3 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mformats-gpl[0;1m ---[m
#14 313.3 [[1;34mINFO[m] 
#14 313.3 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 313.3 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 313.3 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 313.3 [[1;34mINFO[m] Storing buildNumber: 67919a20c70e73c476924ff1cffc6e10afdfca2f at timestamp: 1735085838808
#14 313.3 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 313.3 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 313.3 
#14 313.3 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 313.3 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 313.3 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 313.3 [[1;34mINFO[m] 
#14 313.3 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mformats-gpl[0;1m <<<[m
#14 313.3 [[1;34mINFO[m] 
#14 313.3 [[1;34mINFO[m] 
#14 313.3 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 313.3 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.1.0-SNAPSHOT-sources.jar
#14 313.4 [[1;34mINFO[m] 
#14 313.4 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 313.4 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.1.0-SNAPSHOT-tests.jar
#14 313.4 [[1;34mINFO[m] 
#14 313.4 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mformats-gpl[0;1m ---[m
#14 313.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.1.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.jar
#14 313.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.pom
#14 313.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.1.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT-sources.jar
#14 313.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.1.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT-tests.jar
#14 313.4 [[1;34mINFO[m] 
#14 313.4 [[1;34mINFO[m] [1m----------------------< [0;36mome:bio-formats_plugins[0;1m >-----------------------[m
#14 313.4 [[1;34mINFO[m] [1mBuilding Bio-Formats Plugins for ImageJ 8.1.0-SNAPSHOT           [17/24][m
#14 313.4 [[1;34mINFO[m] [1m--------------------------------[ jar ]---------------------------------[m
#14 313.4 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.pom
#14 313.5 Progress (1): 4.1/7.9 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.pom (7.9 kB at 77 kB/s)
#14 313.5 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar
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Downloaded from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar (2.5 MB at 12 MB/s)
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#14 313.7 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 313.7 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 313.7 [[1;34mINFO[m] Storing buildNumber: 67919a20c70e73c476924ff1cffc6e10afdfca2f at timestamp: 1735085839232
#14 313.7 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 313.7 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 313.7 
#14 313.7 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 313.7 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 313.7 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
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#14 313.7 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-plugins/lib
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#14 313.8 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 313.8 [[1;34mINFO[m] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/target/classes
#14 314.4 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Some input files use or override a deprecated API.
#14 314.4 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Recompile with -Xlint:deprecation for details.
#14 314.4 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#14 314.4 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: Recompile with -Xlint:unchecked for details.
#14 314.4 [[1;34mINFO[m] 
#14 314.4 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 314.4 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 314.4 [[1;34mINFO[m] Copying 1 resource
#14 314.4 [[1;34mINFO[m] 
#14 314.4 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 314.4 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 314.4 [[1;34mINFO[m] Compiling 3 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/target/test-classes
#14 314.6 [[1;34mINFO[m] 
#14 314.6 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 314.6 [[1;34mINFO[m] 
#14 314.6 [[1;34mINFO[m] -------------------------------------------------------
#14 314.6 [[1;34mINFO[m]  T E S T S
#14 314.6 [[1;34mINFO[m] -------------------------------------------------------
#14 314.7 [[1;34mINFO[m] Running [1mTestSuite[m
#14 316.0 Warning: Data has too many channels for Colorized color mode
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#14 316.3 Warning: Data has too many channels for Colorized color mode
#14 316.3 Warning: Data has too many channels for Colorized color mode
#14 316.4 Warning: Data has too many channels for Composite color mode
#14 316.4 Warning: Data has too many channels for Composite color mode
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#14 316.7 Warning: Data has too many channels for Composite color mode
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#14 316.7 Warning: Data has too many channels for Composite color mode
#14 316.7 Warning: Data has too many channels for Composite color mode
#14 316.7 Warning: Data has too many channels for Composite color mode
#14 316.7 Warning: Data has too many channels for Composite color mode
#14 316.7 Warning: Data has too many channels for Composite color mode
#14 316.7 Warning: Data has too many channels for Composite color mode
#14 316.8 Warning: Data has too many channels for Composite color mode
#14 316.8 Warning: Data has too many channels for Composite color mode
#14 316.8 Warning: Data has too many channels for Composite color mode
#14 316.8 Warning: Data has too many channels for Composite color mode
#14 316.8 Warning: Data has too many channels for Composite color mode
#14 317.1 Warning: Data has too many channels for Composite color mode
#14 317.1 Warning: Data has too many channels for Composite color mode
#14 317.1 Warning: Data has too many channels for Composite color mode
#14 317.1 Warning: Data has too many channels for Composite color mode
#14 317.1 Warning: Data has too many channels for Composite color mode
#14 317.1 Warning: Data has too many channels for Composite color mode
#14 317.1 Warning: Data has too many channels for Composite color mode
#14 317.1 Warning: Data has too many channels for Composite color mode
#14 317.1 Warning: Data has too many channels for Composite color mode
#14 317.2 Warning: Data has too many channels for Composite color mode
#14 317.2 Warning: Data has too many channels for Composite color mode
#14 317.2 Warning: Data has too many channels for Composite color mode
#14 317.2 Warning: Data has too many channels for Composite color mode
#14 317.2 Warning: Data has too many channels for Composite color mode
#14 317.2 Warning: Data has too many channels for Composite color mode
#14 317.2 Warning: Data has too many channels for Composite color mode
#14 317.2 Warning: Data has too many channels for Composite color mode
#14 317.2 Warning: Data has too many channels for Composite color mode
#14 317.5 Warning: Data has too many channels for Composite color mode
#14 317.6 Warning: Data has too many channels for Composite color mode
#14 317.6 Warning: Data has too many channels for Composite color mode
#14 317.6 Warning: Data has too many channels for Composite color mode
#14 317.6 Warning: Data has too many channels for Composite color mode
#14 317.6 Warning: Data has too many channels for Composite color mode
#14 317.6 Warning: Data has too many channels for Composite color mode
#14 317.6 Warning: Data has too many channels for Composite color mode
#14 317.6 Warning: Data has too many channels for Composite color mode
#14 317.6 Warning: Data has too many channels for Composite color mode
#14 317.6 Warning: Data has too many channels for Composite color mode
#14 317.7 Warning: Data has too many channels for Composite color mode
#14 317.7 Warning: Data has too many channels for Composite color mode
#14 317.7 Warning: Data has too many channels for Composite color mode
#14 317.7 Warning: Data has too many channels for Composite color mode
#14 317.7 Warning: Data has too many channels for Composite color mode
#14 318.0 Warning: Data has too many channels for Composite color mode
#14 318.0 Warning: Data has too many channels for Composite color mode
#14 318.0 Warning: Data has too many channels for Composite color mode
#14 318.0 Warning: Data has too many channels for Composite color mode
#14 318.1 Warning: Data has too many channels for Composite color mode
#14 318.1 Warning: Data has too many channels for Composite color mode
#14 318.1 Warning: Data has too many channels for Composite color mode
#14 318.1 Warning: Data has too many channels for Composite color mode
#14 318.1 Warning: Data has too many channels for Composite color mode
#14 318.1 Warning: Data has too many channels for Composite color mode
#14 318.1 Warning: Data has too many channels for Composite color mode
#14 318.1 Warning: Data has too many channels for Composite color mode
#14 318.1 Warning: Data has too many channels for Composite color mode
#14 318.2 Warning: Data has too many channels for Composite color mode
#14 318.2 Warning: Data has too many channels for Composite color mode
#14 318.2 Warning: Data has too many channels for Composite color mode
#14 318.2 Warning: Data has too many channels for Custom color mode
#14 318.2 Warning: Data has too many channels for Custom color mode
#14 318.2 Warning: Data has too many channels for Custom color mode
#14 318.3 Warning: Data has too many channels for Custom color mode
#14 318.3 Warning: Data has too many channels for Custom color mode
#14 318.3 Warning: Data has too many channels for Custom color mode
#14 318.3 Warning: Data has too many channels for Custom color mode
#14 318.4 Warning: Data has too many channels for Custom color mode
#14 318.4 Warning: Data has too many channels for Default color mode
#14 318.4 Warning: Data has too many channels for Default color mode
#14 318.4 Warning: Data has too many channels for Default color mode
#14 318.4 Warning: Data has too many channels for Default color mode
#14 318.5 Warning: Data has too many channels for Default color mode
#14 318.5 Warning: Data has too many channels for Default color mode
#14 318.5 Warning: Data has too many channels for Default color mode
#14 318.5 Warning: Data has too many channels for Default color mode
#14 318.6 Warning: Data has too many channels for Default color mode
#14 318.6 Warning: Data has too many channels for Default color mode
#14 318.6 Warning: Data has too many channels for Default color mode
#14 318.6 Warning: Data has too many channels for Default color mode
#14 318.6 Warning: Data has too many channels for Default color mode
#14 318.7 Warning: Data has too many channels for Default color mode
#14 318.7 Warning: Data has too many channels for Default color mode
#14 318.7 Warning: Data has too many channels for Default color mode
#14 318.7 Warning: Data has too many channels for Grayscale color mode
#14 318.8 Warning: Data has too many channels for Grayscale color mode
#14 318.8 Warning: Data has too many channels for Grayscale color mode
#14 318.8 Warning: Data has too many channels for Grayscale color mode
#14 318.8 Warning: Data has too many channels for Grayscale color mode
#14 318.8 Warning: Data has too many channels for Grayscale color mode
#14 318.9 Warning: Data has too many channels for Grayscale color mode
#14 318.9 Warning: Data has too many channels for Grayscale color mode
#14 318.9 Warning: Data has too many channels for Colorized color mode
#14 318.9 Warning: Data has too many channels for Colorized color mode
#14 319.0 Warning: Data has too many channels for Colorized color mode
#14 319.5 Warning: Data has too many channels for Default color mode
#14 319.7 [[1;34mINFO[m] [1;32mTests run: [0;1;32m30[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 4.981 s - in [1mTestSuite[m
#14 320.1 [[1;34mINFO[m] 
#14 320.1 [[1;34mINFO[m] Results:
#14 320.1 [[1;34mINFO[m] 
#14 320.1 [[1;34mINFO[m] [1;32mTests run: 30, Failures: 0, Errors: 0, Skipped: 0[m
#14 320.1 [[1;34mINFO[m] 
#14 320.1 [[1;34mINFO[m] 
#14 320.1 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 320.1 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.1.0-SNAPSHOT.jar
#14 320.1 [[1;34mINFO[m] 
#14 320.1 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbio-formats_plugins[0;1m >>>[m
#14 320.1 [[1;34mINFO[m] 
#14 320.1 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 320.1 [[1;34mINFO[m] 
#14 320.1 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 320.1 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 320.1 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 320.1 [[1;34mINFO[m] Storing buildNumber: 67919a20c70e73c476924ff1cffc6e10afdfca2f at timestamp: 1735085845592
#14 320.1 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 320.1 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 320.1 
#14 320.1 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 320.1 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 320.1 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 320.1 [[1;34mINFO[m] 
#14 320.1 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbio-formats_plugins[0;1m <<<[m
#14 320.1 [[1;34mINFO[m] 
#14 320.1 [[1;34mINFO[m] 
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#14 320.1 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.1.0-SNAPSHOT-sources.jar
#14 320.1 [[1;34mINFO[m] 
#14 320.1 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 320.1 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.1.0-SNAPSHOT-tests.jar
#14 320.1 [[1;34mINFO[m] 
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#14 320.1 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.1.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.jar
#14 320.1 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.pom
#14 320.1 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.1.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT-sources.jar
#14 320.2 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.1.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT-tests.jar
#14 320.2 [[1;34mINFO[m] 
#14 320.2 [[1;34mINFO[m] [1m-----------------------< [0;36mome:bio-formats-tools[0;1m >------------------------[m
#14 320.2 [[1;34mINFO[m] [1mBuilding Bio-Formats command line tools 8.1.0-SNAPSHOT           [18/24][m
#14 320.2 [[1;34mINFO[m] [1m--------------------------------[ jar ]---------------------------------[m
#14 320.2 [[1;34mINFO[m] 
#14 320.2 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbio-formats-tools[0;1m ---[m
#14 320.2 [[1;34mINFO[m] 
#14 320.2 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats-tools[0;1m ---[m
#14 320.2 [[1;34mINFO[m] 
#14 320.2 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 320.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 320.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 320.2 [[1;34mINFO[m] Storing buildNumber: 67919a20c70e73c476924ff1cffc6e10afdfca2f at timestamp: 1735085845661
#14 320.2 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 320.2 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 320.2 
#14 320.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 320.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 320.2 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 320.2 [[1;34mINFO[m] 
#14 320.2 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:resources[m [1m(default-resources)[m @ [36mbio-formats-tools[0;1m ---[m
#14 320.2 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 320.2 [[1;34mINFO[m] Copying 0 resource
#14 320.2 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-tools/lib
#14 320.2 [[1;34mINFO[m] Copying 0 resource
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#14 320.2 [[1;34mINFO[m] 
#14 320.2 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:compile[m [1m(default-compile)[m @ [36mbio-formats-tools[0;1m ---[m
#14 320.2 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 320.2 [[1;34mINFO[m] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/target/classes
#14 320.3 [[1;34mINFO[m] 
#14 320.3 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mbio-formats-tools[0;1m ---[m
#14 320.3 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 320.3 [[1;34mINFO[m] Copying 1 resource
#14 320.3 [[1;34mINFO[m] 
#14 320.3 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mbio-formats-tools[0;1m ---[m
#14 320.3 [[1;34mINFO[m] Changes detected - recompiling the module!
#14 320.3 [[1;34mINFO[m] Compiling 1 source file to /bio-formats-build/bioformats/components/bio-formats-tools/target/test-classes
#14 320.5 [[1;34mINFO[m] 
#14 320.5 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mbio-formats-tools[0;1m ---[m
#14 320.5 [[1;34mINFO[m] 
#14 320.5 [[1;34mINFO[m] -------------------------------------------------------
#14 320.5 [[1;34mINFO[m]  T E S T S
#14 320.5 [[1;34mINFO[m] -------------------------------------------------------
#14 320.6 [[1;34mINFO[m] Running loci.formats.tools.[1mImageConverterTest[m
#14 385.7 [[1;34mINFO[m] [1;32mTests run: [0;1;32m55[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 65.114 s - in loci.formats.tools.[1mImageConverterTest[m
#14 386.1 [[1;34mINFO[m] 
#14 386.1 [[1;34mINFO[m] Results:
#14 386.1 [[1;34mINFO[m] 
#14 386.1 [[1;34mINFO[m] [1;32mTests run: 55, Failures: 0, Errors: 0, Skipped: 0[m
#14 386.1 [[1;34mINFO[m] 
#14 386.1 [[1;34mINFO[m] 
#14 386.1 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mbio-formats-tools[0;1m ---[m
#14 386.1 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.1.0-SNAPSHOT.jar
#14 386.1 [[1;34mINFO[m] 
#14 386.1 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbio-formats-tools[0;1m >>>[m
#14 386.1 [[1;34mINFO[m] 
#14 386.1 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats-tools[0;1m ---[m
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#14 386.1 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.1.0-SNAPSHOT-sources.jar
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#14 386.1 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT.pom
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#14 386.1 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.1.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT-tests.jar
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#14 386.1 [[1;34mINFO[m] [1m--------------------------------[ pom ]---------------------------------[m
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#14 386.2 [[1;34mINFO[m] 
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#14 386.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 386.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
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#14 386.2 [[1;33mWARNING[m] Cannot get the branch information from the git repository: 
#14 386.2 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 386.2 
#14 386.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
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#14 386.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
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#14 386.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
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#14 386.4 [[1;34mINFO[m] Reading assembly descriptor: assembly.xml
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#14 386.7 
#14 386.7 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/maven-bundle-plugin/5.1.8/maven-bundle-plugin-5.1.8.pom
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#14 387.6 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-api/3.3.9/maven-plugin-api-3.3.9.pom
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#14 387.6 Downloading from central: https://repo.maven.apache.org/maven2/org/eclipse/sisu/org.eclipse.sisu.plexus/0.3.2/org.eclipse.sisu.plexus-0.3.2.pom
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#14 387.7 Downloading from central: https://repo.maven.apache.org/maven2/org/eclipse/sisu/sisu-plexus/0.3.2/sisu-plexus-0.3.2.pom
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#14 387.7 Downloading from central: https://repo.maven.apache.org/maven2/org/jboss/weld/weld-api-parent/1.0/weld-api-parent-1.0.pom
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#14 387.7 Downloading from central: https://repo.maven.apache.org/maven2/org/jboss/weld/weld-api-bom/1.0/weld-api-bom-1.0.pom
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#14 387.8 Downloading from central: https://repo.maven.apache.org/maven2/org/jboss/weld/weld-parent/6/weld-parent-6.pom
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#14 387.8 Downloading from central: https://repo.maven.apache.org/maven2/javax/annotation/jsr250-api/1.0/jsr250-api-1.0.pom
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#14 387.9 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-classworlds/2.5.2/plexus-classworlds-2.5.2.pom
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#14 388.0 Downloading from central: https://repo.maven.apache.org/maven2/com/google/guava/guava-parent/18.0/guava-parent-18.0.pom
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#14 388.0 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-aether-provider/3.3.9/maven-aether-provider-3.3.9.pom
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#14 388.0 Downloading from central: https://repo.maven.apache.org/maven2/org/eclipse/aether/aether-api/1.0.2.v20150114/aether-api-1.0.2.v20150114.pom
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#14 388.1 Downloading from central: https://repo.maven.apache.org/maven2/org/eclipse/aether/aether/1.0.2.v20150114/aether-1.0.2.v20150114.pom
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Pro
#14 388.1 [output clipped, log limit 2MiB reached]
#14 493.5 SLF4J: No SLF4J providers were found.
#14 493.5 SLF4J: Defaulting to no-operation (NOP) logger implementation
#14 493.5 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#14 DONE 504.0s

#15 [11/13] WORKDIR /bio-formats-build/bioformats
#15 DONE 0.0s

#16 [12/13] RUN ant jars tools
#16 0.908 Buildfile: /bio-formats-build/bioformats/build.xml
#16 1.774      [echo] isSnapshot = true
#16 1.879 
#16 1.879 copy-jars:
#16 1.879 
#16 1.879 deps-formats-api:
#16 1.962      [echo] isSnapshot = true
#16 2.017 
#16 2.017 install-pom:
#16 2.190 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.1.0-SNAPSHOT/pom-bio-formats-8.1.0-SNAPSHOT.pom
#16 2.359 [resolver:install] Installing ome:pom-bio-formats:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 2.363 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 2.364 
#16 2.364 jar-formats-api:
#16 2.480      [echo] isSnapshot = true
#16 2.633 
#16 2.633 init-title:
#16 2.633      [echo] ----------=========== formats-api ===========----------
#16 2.633 
#16 2.633 init-timestamp:
#16 2.640 
#16 2.640 init:
#16 2.640 
#16 2.640 copy-resources:
#16 2.641     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.653      [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 2.656 
#16 2.656 compile:
#16 2.842 [resolver:resolve] Resolving artifacts
#16 2.868     [javac] Compiling 53 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 3.081     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 3.683     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:52: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 3.683     [javac] import loci.common.ReflectedUniverse;
#16 3.683     [javac]                   ^
#16 3.883     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 3.883     [javac]     int currentIndex = r.getCoreIndex();
#16 3.883     [javac]                         ^
#16 3.883     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.883     [javac]     r.setCoreIndex(coreIndex);
#16 3.883     [javac]      ^
#16 3.884     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 3.884     [javac]     r.setCoreIndex(currentIndex);
#16 3.884     [javac]      ^
#16 4.084     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.084     [javac]   public void setCoreIndex(int no) {
#16 4.084     [javac]               ^
#16 4.084     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.084     [javac]   public int getCoreIndex() {
#16 4.084     [javac]              ^
#16 4.085     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.085     [javac]   public int coreIndexToSeries(int index)
#16 4.085     [javac]              ^
#16 4.085     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.085     [javac]   public int seriesToCoreIndex(int series)
#16 4.085     [javac]              ^
#16 4.085     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.085     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 4.085     [javac]                             ^
#16 4.186     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.186     [javac]     if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#16 4.186     [javac]                                              ^
#16 4.186     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.186     [javac]     if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#16 4.186     [javac]                                              ^
#16 4.186     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.186     [javac]       core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 4.186     [javac]                                                      ^
#16 4.186     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.186     [javac]       core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#16 4.186     [javac]                                                      ^
#16 4.287     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 4.287     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#16 4.287     [javac]     ^
#16 4.287     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 4.287     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#16 4.287     [javac]                               ^
#16 4.388     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:773: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.388     [javac]   public void setCoreIndex(int no) {
#16 4.388     [javac]               ^
#16 4.388     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:767: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.388     [javac]   public int getCoreIndex() {
#16 4.388     [javac]              ^
#16 4.388     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:783: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.388     [javac]   public int coreIndexToSeries(int index) {
#16 4.388     [javac]              ^
#16 4.388     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:778: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.388     [javac]   public int seriesToCoreIndex(int series) {
#16 4.388     [javac]              ^
#16 4.388     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:587: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.388     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 4.388     [javac]                             ^
#16 4.389     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:588: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.389     [javac]     return getReader().getCoreMetadataList();
#16 4.389     [javac]                       ^
#16 4.389     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:768: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.389     [javac]     return getReader().getCoreIndex();
#16 4.389     [javac]                       ^
#16 4.389     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:774: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.389     [javac]     getReader().setCoreIndex(no);
#16 4.389     [javac]                ^
#16 4.389     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:779: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.389     [javac]     return getReader().seriesToCoreIndex(series);
#16 4.389     [javac]                       ^
#16 4.389     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:784: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.390     [javac]     return getReader().coreIndexToSeries(index);
#16 4.390     [javac]                       ^
#16 4.390     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.390     [javac]   public void setCoreIndex(int no) {
#16 4.390     [javac]               ^
#16 4.390     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.390     [javac]   public int getCoreIndex() {
#16 4.390     [javac]              ^
#16 4.390     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.390     [javac]   public int coreIndexToSeries(int index) {
#16 4.390     [javac]              ^
#16 4.390     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.390     [javac]   public int seriesToCoreIndex(int series) {
#16 4.390     [javac]              ^
#16 4.390     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.390     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 4.390     [javac]                             ^
#16 4.391     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.391     [javac]     List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 4.391     [javac]                                        ^
#16 4.391     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.391     [javac]     return reader.getCoreIndex();
#16 4.391     [javac]                  ^
#16 4.391     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.391     [javac]     reader.setCoreIndex(no);
#16 4.391     [javac]           ^
#16 4.391     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.391     [javac]     return reader.seriesToCoreIndex(series);
#16 4.391     [javac]                  ^
#16 4.391     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.391     [javac]     return reader.coreIndexToSeries(index);
#16 4.391     [javac]                  ^
#16 4.592     [javac] Note: Some input files use unchecked or unsafe operations.
#16 4.592     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 4.592     [javac] 36 warnings
#16 4.601 
#16 4.601 formats-api.jar:
#16 4.602     [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#16 4.626       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#16 4.657 [resolver:install] Using default POM (ome:formats-api:8.1.0-SNAPSHOT)
#16 4.661 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/formats-api-8.1.0-SNAPSHOT.pom
#16 4.780 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/formats-api-8.1.0-SNAPSHOT.jar
#16 4.782 [resolver:install] Installing ome:formats-api:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 4.784 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 4.785 
#16 4.785 deps-turbojpeg:
#16 4.785 
#16 4.785 jar-turbojpeg:
#16 4.882      [echo] isSnapshot = true
#16 5.030 
#16 5.030 init-title:
#16 5.030      [echo] ----------=========== turbojpeg ===========----------
#16 5.030 
#16 5.030 init-timestamp:
#16 5.031 
#16 5.031 init:
#16 5.031 
#16 5.031 copy-resources:
#16 5.031     [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 5.032 
#16 5.032 compile:
#16 5.042 [resolver:resolve] Resolving artifacts
#16 5.045     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 5.247     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 5.848     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:449: warning: [deprecation] finalize() in Object has been deprecated
#16 5.848     [javac]   protected void finalize() throws Throwable {
#16 5.848     [javac]                  ^
#16 5.848     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:455: warning: [deprecation] finalize() in Object has been deprecated
#16 5.848     [javac]       super.finalize();
#16 5.848     [javac]            ^
#16 5.848     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:504: warning: [deprecation] finalize() in Object has been deprecated
#16 5.848     [javac]   protected void finalize() throws Throwable {
#16 5.848     [javac]                  ^
#16 5.848     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:510: warning: [deprecation] finalize() in Object has been deprecated
#16 5.848     [javac]       super.finalize();
#16 5.848     [javac]            ^
#16 5.883     [javac] 5 warnings
#16 5.884 
#16 5.884 jar:
#16 5.888       [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#16 6.074 [resolver:install] Using default POM (ome:turbojpeg:8.1.0-SNAPSHOT)
#16 6.082 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/turbojpeg-8.1.0-SNAPSHOT.pom
#16 6.084 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/turbojpeg-8.1.0-SNAPSHOT.jar
#16 6.086 [resolver:install] Installing ome:turbojpeg:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 6.089 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 6.090 
#16 6.090 deps-formats-bsd:
#16 6.090 
#16 6.090 jar-formats-bsd:
#16 6.204      [echo] isSnapshot = true
#16 6.345 
#16 6.345 init-title:
#16 6.345      [echo] ----------=========== formats-bsd ===========----------
#16 6.345 
#16 6.345 init-timestamp:
#16 6.346 
#16 6.346 init:
#16 6.346 
#16 6.346 copy-resources:
#16 6.346     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 6.349      [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 6.350 
#16 6.350 compile:
#16 6.559 [resolver:resolve] Resolving artifacts
#16 6.585     [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 6.793     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 7.894     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:45: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 7.894     [javac] import loci.common.ReflectedUniverse;
#16 7.894     [javac]                   ^
#16 8.295     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.295     [javac]       core.size() != reader.getCoreMetadataList().size())
#16 8.295     [javac]                            ^
#16 8.295     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.295     [javac]       List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 8.295     [javac]                                          ^
#16 8.295     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.295     [javac]     int n = reader.getCoreMetadataList().size();
#16 8.295     [javac]                   ^
#16 8.295     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 8.295     [javac]     reader.setCoreIndex(coreIndex);
#16 8.295     [javac]           ^
#16 8.295     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.295     [javac]     int n = reader.getCoreMetadataList().size();
#16 8.295     [javac]                   ^
#16 8.295     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.295     [javac]     int n = reader.getCoreMetadataList().size();
#16 8.295     [javac]                   ^
#16 8.295     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 8.295     [javac]     if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#16 8.296     [javac]                                         ^
#16 8.296     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.296     [javac]     int n = reader.getCoreMetadataList().size();
#16 8.296     [javac]                   ^
#16 8.296     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 8.296     [javac]     if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#16 8.296     [javac]                                         ^
#16 8.296     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.296     [javac]     int n = reader.getCoreMetadataList().size();
#16 8.296     [javac]                   ^
#16 8.296     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 8.296     [javac]     if (n > 1 || noStitch) reader.setCoreIndex(no);
#16 8.296     [javac]                                  ^
#16 8.296     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 8.296     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 8.296     [javac]                  ^
#16 8.296     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 8.296     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 8.296     [javac]                                              ^
#16 8.296     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.296     [javac]     return noStitch ? reader.getCoreMetadataList() : core;
#16 8.296     [javac]                             ^
#16 8.296     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.296     [javac]     if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#16 8.296     [javac]               ^
#16 8.296     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.296     [javac]       seriesCount = reader.getCoreMetadataList().size();
#16 8.296     [javac]                           ^
#16 8.296     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.296     [javac]       if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#16 8.296     [javac]                 ^
#16 8.296     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.296     [javac]     if (reader.getCoreMetadataList().size() > 1) return 0;
#16 8.296     [javac]               ^
#16 8.397     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.397     [javac]       r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#16 8.397     [javac]                            ^
#16 8.497     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.497     [javac]     int seriesCount = unwrap().getCoreMetadataList().size();
#16 8.497     [javac]                               ^
#16 8.597     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 8.597     [javac]     BitWriter out = new BitWriter();
#16 8.597     [javac]     ^
#16 8.597     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 8.597     [javac]     BitWriter out = new BitWriter();
#16 8.597     [javac]                         ^
#16 8.698     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/dicom/DicomTag.java:537: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 8.698     [javac]       return new Double(v);
#16 8.698     [javac]              ^
#16 9.399     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2106: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 9.399     [javac]     return FormatTools.getPhysicalSizeX(new Double(pixelSizeX), UNITS.MILLIMETER);
#16 9.399     [javac]                                         ^
#16 9.399     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2113: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 9.399     [javac]     return FormatTools.getPhysicalSizeY(new Double(pixelSizeY), UNITS.MILLIMETER);
#16 9.399     [javac]                                         ^
#16 9.399     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2120: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 9.399     [javac]     return FormatTools.getPhysicalSizeZ(new Double(pixelSizeZ), UNITS.MILLIMETER);
#16 9.399     [javac]                                         ^
#16 9.499     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/ICSReader.java:1142: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 9.499     [javac]                channelNames.put(new Integer(channelNames.size()), value);
#16 9.500     [javac]                                 ^
#16 9.700     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:618: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.700     [javac]       OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#16 9.700     [javac]                                                                    ^
#16 9.800     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#16 9.800     [javac]     StreamTokenizer st = new StreamTokenizer(in);
#16 9.800     [javac]                          ^
#16 9.900     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.900     [javac]     core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 9.900     [javac]                                                    ^
#16 9.900     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 9.901     [javac]   protected ReflectedUniverse r;
#16 9.901     [javac]             ^
#16 9.901     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 9.901     [javac]       r = new ReflectedUniverse();
#16 9.901     [javac]               ^
#16 9.901     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1043: warning: [deprecation] NM in UNITS has been deprecated
#16 9.901     [javac]           wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#16 9.901     [javac]                                                                               ^
#16 9.901     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1075: warning: [deprecation] MM in UNITS has been deprecated
#16 9.901     [javac]           sliceThickness.value = padString(String.valueOf(physicalZ.value(UNITS.MM)));
#16 9.901     [javac]                                                                                ^
#16 9.901     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1088: warning: [deprecation] MM in UNITS has been deprecated
#16 9.901     [javac]         String px = physicalX == null ? "1" : String.valueOf(physicalX.value(UNITS.MM));
#16 9.901     [javac]                                                                                   ^
#16 9.901     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1089: warning: [deprecation] MM in UNITS has been deprecated
#16 9.901     [javac]         String py = physicalY == null ? "1" : String.valueOf(physicalY.value(UNITS.MM));
#16 9.901     [javac]                                                                                   ^
#16 9.901     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1108: warning: [deprecation] MM in UNITS has been deprecated
#16 9.901     [javac]         volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#16 9.901     [javac]                                                                                        ^
#16 9.901     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1112: warning: [deprecation] MM in UNITS has been deprecated
#16 9.901     [javac]         volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#16 9.901     [javac]                                                                                         ^
#16 9.901     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1118: warning: [deprecation] MM in UNITS has been deprecated
#16 9.901     [javac]         volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#16 9.901     [javac]                                                                                        ^
#16 9.901     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1166: warning: [deprecation] MM in UNITS has been deprecated
#16 9.901     [javac]             offsetX.value = padString(physicalX == null ? "0" : padString(String.valueOf(physicalX.value(UNITS.MM).floatValue() * width)));
#16 9.901     [javac]                                                                                                               ^
#16 9.901     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1170: warning: [deprecation] MM in UNITS has been deprecated
#16 9.901     [javac]             offsetY.value = padString(physicalY == null ? "0" : padString(String.valueOf(physicalY.value(UNITS.MM).floatValue() * height)));
#16 9.902     [javac]                                                                                                               ^
#16 10.00     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 10.00     [javac]       ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 10.00     [javac]               ^
#16 10.00     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 10.00     [javac]       ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 10.00     [javac]                                            ^
#16 10.00     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 10.00     [javac]       ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 10.00     [javac]               ^
#16 10.00     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 10.00     [javac]       ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 10.00     [javac]                                             ^
#16 10.10     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#16 10.10     [javac]       libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#16 10.10     [javac]                                        ^
#16 10.10     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:320: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 10.10     [javac]         doubleResult[i] = new Double(result.get(i).doubleValue());
#16 10.10     [javac]                           ^
#16 10.10     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:342: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 10.10     [javac]       result[i] = new Double(readNumber().doubleValue());
#16 10.10     [javac]                   ^
#16 10.10     [javac] Note: Some input files use unchecked or unsafe operations.
#16 10.10     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 10.10     [javac] 50 warnings
#16 10.13 
#16 10.13 formats-bsd.jar:
#16 10.14       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#16 10.25 [resolver:install] Using default POM (ome:formats-bsd:8.1.0-SNAPSHOT)
#16 10.25 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/formats-bsd-8.1.0-SNAPSHOT.pom
#16 10.36 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/formats-bsd-8.1.0-SNAPSHOT.jar
#16 10.36 [resolver:install] Installing ome:formats-bsd:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 10.37 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 10.37 
#16 10.37 deps-formats-gpl:
#16 10.37 
#16 10.37 jar-formats-gpl:
#16 10.46      [echo] isSnapshot = true
#16 10.59 
#16 10.59 init-title:
#16 10.59      [echo] ----------=========== formats-gpl ===========----------
#16 10.59 
#16 10.59 init-timestamp:
#16 10.59 
#16 10.59 init:
#16 10.59 
#16 10.59 copy-resources:
#16 10.59     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 10.60      [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 10.60 
#16 10.60 compile:
#16 10.98 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 11.22 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 11.25 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom (0 B at 0.0 KB/sec)
#16 11.26 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 11.27 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 11.28 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom (0 B at 0.0 KB/sec)
#16 11.29 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 11.30 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 11.31 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom (0 B at 0.0 KB/sec)
#16 11.35 [resolver:resolve] Resolving artifacts
#16 11.36 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 11.36 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 11.40 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 11.40 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 11.42 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar (0 B at 0.0 KB/sec)
#16 11.42 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar (0 B at 0.0 KB/sec)
#16 11.44     [javac] Compiling 175 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 11.64     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 12.94     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:50: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 12.94     [javac] import loci.formats.codec.BitWriter;
#16 12.94     [javac]                          ^
#16 12.94     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:43: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 12.94     [javac] import loci.formats.codec.BitWriter;
#16 12.94     [javac]                          ^
#16 15.05     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:1321: warning: non-varargs call of varargs method with inexact argument type for last parameter;
#16 15.05     [javac]       LOGGER.trace("Parsing tokens: {}", tokens);
#16 15.05     [javac]                                          ^
#16 15.05     [javac]   cast to Object for a varargs call
#16 15.05     [javac]   cast to Object[] for a non-varargs call and to suppress this warning
#16 15.15     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1257: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.15     [javac]     BitWriter bits = null;
#16 15.15     [javac]     ^
#16 15.15     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1259: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.15     [javac]       bits = new BitWriter(planes[index].length / 8);
#16 15.15     [javac]                  ^
#16 15.45     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java:196: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 15.45     [javac]     CoreMetadata ms = new CoreMetadata(helperReader.getCoreMetadataList().get(0));
#16 15.45     [javac]                                                    ^
#16 15.85     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.85     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 15.85     [javac]     ^
#16 15.85     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.85     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 15.85     [javac]                          ^
#16 16.11     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:170: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 16.11     [javac]     Variable variable = group.findVariable(variableName);
#16 16.11     [javac]                              ^
#16 16.11     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:197: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 16.11     [javac]     Variable variable = group.findVariable(variableName);
#16 16.11     [javac]                              ^
#16 16.11     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:200: warning: [deprecation] getAttributes() in Variable has been deprecated
#16 16.11     [javac]       List<Attribute> attributes = variable.getAttributes();
#16 16.11     [javac]                                            ^
#16 16.11     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:238: warning: [deprecation] getName() in CDMNode has been deprecated
#16 16.11     [javac]       String groupName = group.getName();
#16 16.11     [javac]                               ^
#16 16.11     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:239: warning: [deprecation] getAttributes() in Group has been deprecated
#16 16.11     [javac]       List<Attribute> attributes = group.getAttributes();
#16 16.11     [javac]                                         ^
#16 16.11     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:247: warning: [deprecation] getName() in CDMNode has been deprecated
#16 16.11     [javac]         String variableName = variable.getName();
#16 16.11     [javac]                                       ^
#16 16.11     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:270: warning: [deprecation] findGroup(String) in Group has been deprecated
#16 16.11     [javac]       Group nextParent = parent.findGroup(token);
#16 16.11     [javac]                                ^
#16 16.11     [javac] Note: Some input files use unchecked or unsafe operations.
#16 16.11     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 16.11     [javac] 16 warnings
#16 16.11 
#16 16.11 formats-gpl.jar:
#16 16.12       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#16 16.26 [resolver:install] Using default POM (ome:formats-gpl:8.1.0-SNAPSHOT)
#16 16.26 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.pom
#16 16.26 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.jar
#16 16.26 [resolver:install] Installing ome:formats-gpl:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 16.27 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 16.27 
#16 16.27 deps-bio-formats-plugins:
#16 16.27 
#16 16.27 jar-bio-formats-plugins:
#16 16.36      [echo] isSnapshot = true
#16 16.49 
#16 16.49 init-title:
#16 16.49      [echo] ----------=========== bio-formats_plugins ===========----------
#16 16.49 
#16 16.49 init-timestamp:
#16 16.49 
#16 16.49 init:
#16 16.49 
#16 16.49 copy-resources:
#16 16.49     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 16.50      [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 16.50 
#16 16.50 compile:
#16 16.75 [resolver:resolve] Resolving artifacts
#16 16.76     [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 16.97     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 17.77     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:39: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 17.77     [javac] import loci.common.ReflectedUniverse;
#16 17.77     [javac]                   ^
#16 17.77     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:40: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 17.77     [javac] import loci.common.ReflectedUniverse;
#16 17.77     [javac]                   ^
#16 18.27     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:51: warning: [deprecation] STABLE_VERSION in UpgradeChecker has been deprecated
#16 18.27     [javac]     "Stable build (" + UpgradeChecker.STABLE_VERSION + ")";
#16 18.27     [javac]                                      ^
#16 18.37     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 18.37     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#16 18.37     [javac]         ^
#16 18.37     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 18.37     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#16 18.37     [javac]                                   ^
#16 18.57     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 18.57     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#16 18.57     [javac]     ^
#16 18.57     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 18.57     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#16 18.57     [javac]                                ^
#16 18.95     [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#16 18.95     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 18.95     [javac] 8 warnings
#16 18.95 
#16 18.95 bio-formats-plugins.jar:
#16 18.96       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#16 18.99 [resolver:install] Using default POM (ome:bio-formats_plugins:8.1.0-SNAPSHOT)
#16 18.99 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.pom
#16 18.99 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.jar
#16 18.99 [resolver:install] Installing ome:bio-formats_plugins:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 18.99 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 18.99 
#16 18.99 deps-bio-formats-tools:
#16 18.99 
#16 18.99 jar-bio-formats-tools:
#16 19.09      [echo] isSnapshot = true
#16 19.22 
#16 19.22 init-title:
#16 19.22      [echo] ----------=========== bio-formats-tools ===========----------
#16 19.22 
#16 19.22 init-timestamp:
#16 19.22 
#16 19.22 init:
#16 19.22 
#16 19.22 copy-resources:
#16 19.22     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 19.22 
#16 19.22 compile:
#16 19.46 [resolver:resolve] Resolving artifacts
#16 19.47     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 19.68     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 20.78     [javac] 1 warning
#16 20.78 
#16 20.78 bio-formats-tools.jar:
#16 20.78       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#16 20.79 [resolver:install] Using default POM (ome:bio-formats-tools:8.1.0-SNAPSHOT)
#16 20.79 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT.pom
#16 20.79 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT.jar
#16 20.79 [resolver:install] Installing ome:bio-formats-tools:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 20.80 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 20.80 
#16 20.80 deps-tests:
#16 20.80 
#16 20.80 jar-tests:
#16 20.88      [echo] isSnapshot = true
#16 21.02 
#16 21.02 init-title:
#16 21.02      [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 21.02 
#16 21.02 init-timestamp:
#16 21.02 
#16 21.02 init:
#16 21.02 
#16 21.02 copy-resources:
#16 21.02     [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#16 21.02 
#16 21.02 compile:
#16 21.30 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 21.38 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 21.39 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 21.81 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 22.23 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom (0 B at 0.0 KB/sec)
#16 22.24 [resolver:resolve] Resolving artifacts
#16 22.25 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 22.29 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 22.30 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 22.70 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 23.07 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#16 23.07     [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#16 23.28     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 24.28     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:605: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 24.28     [javac]         int index = unflattenedReader.getCoreIndex();
#16 24.28     [javac]                                      ^
#16 24.28     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:606: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 24.28     [javac]         reader.setCoreIndex(index);
#16 24.28     [javac]               ^
#16 24.48     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2259: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 24.48     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#16 24.48     [javac]                                              ^
#16 24.48     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2425: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 24.48     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#16 24.48     [javac]                                              ^
#16 24.78     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 24.78     [javac]         FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#16 24.78     [javac]                                                    ^
#16 24.78     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 24.78     [javac]         FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#16 24.78     [javac]                                                    ^
#16 24.78     [javac] Note: Some input files use unchecked or unsafe operations.
#16 24.78     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 24.78     [javac] 7 warnings
#16 24.78 
#16 24.78 tests.jar:
#16 24.78       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#16 24.80 [resolver:install] Using default POM (ome:test-suite:8.1.0-SNAPSHOT)
#16 24.80 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.1.0-SNAPSHOT/test-suite-8.1.0-SNAPSHOT.pom
#16 24.81 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.1.0-SNAPSHOT/test-suite-8.1.0-SNAPSHOT.jar
#16 24.81 [resolver:install] Installing ome:test-suite:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 24.81 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 24.81 
#16 24.81 jars:
#16 24.81 
#16 24.81 copy-jars:
#16 24.81 
#16 24.81 deps-formats-api:
#16 24.86      [echo] isSnapshot = true
#16 24.90 
#16 24.90 install-pom:
#16 25.03 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.1.0-SNAPSHOT/pom-bio-formats-8.1.0-SNAPSHOT.pom
#16 25.03 [resolver:install] Installing ome:pom-bio-formats:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 25.03 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 25.06 
#16 25.06 jar-formats-api:
#16 25.14      [echo] isSnapshot = true
#16 25.27 
#16 25.27 init-title:
#16 25.27      [echo] ----------=========== formats-api ===========----------
#16 25.27 
#16 25.27 init-timestamp:
#16 25.27 
#16 25.27 init:
#16 25.27 
#16 25.27 copy-resources:
#16 25.27 
#16 25.27 compile:
#16 25.40 [resolver:resolve] Resolving artifacts
#16 25.41 
#16 25.41 formats-api.jar:
#16 25.42 [resolver:install] Using default POM (ome:formats-api:8.1.0-SNAPSHOT)
#16 25.43 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/formats-api-8.1.0-SNAPSHOT.pom
#16 25.43 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/formats-api-8.1.0-SNAPSHOT.jar
#16 25.43 [resolver:install] Installing ome:formats-api:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 25.43 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 25.43 
#16 25.43 deps-turbojpeg:
#16 25.43 
#16 25.43 jar-turbojpeg:
#16 25.51      [echo] isSnapshot = true
#16 25.63 
#16 25.63 init-title:
#16 25.63      [echo] ----------=========== turbojpeg ===========----------
#16 25.63 
#16 25.63 init-timestamp:
#16 25.63 
#16 25.63 init:
#16 25.63 
#16 25.63 copy-resources:
#16 25.63 
#16 25.63 compile:
#16 25.64 [resolver:resolve] Resolving artifacts
#16 25.64 
#16 25.64 jar:
#16 25.65 [resolver:install] Using default POM (ome:turbojpeg:8.1.0-SNAPSHOT)
#16 25.66 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/turbojpeg-8.1.0-SNAPSHOT.pom
#16 25.66 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/turbojpeg-8.1.0-SNAPSHOT.jar
#16 25.66 [resolver:install] Installing ome:turbojpeg:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 25.66 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 25.66 
#16 25.66 deps-formats-bsd:
#16 25.66 
#16 25.66 jar-formats-bsd:
#16 25.74      [echo] isSnapshot = true
#16 25.86 
#16 25.86 init-title:
#16 25.86      [echo] ----------=========== formats-bsd ===========----------
#16 25.86 
#16 25.86 init-timestamp:
#16 25.86 
#16 25.86 init:
#16 25.86 
#16 25.86 copy-resources:
#16 25.87 
#16 25.87 compile:
#16 26.07 [resolver:resolve] Resolving artifacts
#16 26.08 
#16 26.08 formats-bsd.jar:
#16 26.12 [resolver:install] Using default POM (ome:formats-bsd:8.1.0-SNAPSHOT)
#16 26.12 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/formats-bsd-8.1.0-SNAPSHOT.pom
#16 26.12 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/formats-bsd-8.1.0-SNAPSHOT.jar
#16 26.12 [resolver:install] Installing ome:formats-bsd:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 26.12 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 26.12 
#16 26.12 deps-formats-gpl:
#16 26.12 
#16 26.12 jar-formats-gpl:
#16 26.20      [echo] isSnapshot = true
#16 26.33 
#16 26.33 init-title:
#16 26.33      [echo] ----------=========== formats-gpl ===========----------
#16 26.33 
#16 26.33 init-timestamp:
#16 26.33 
#16 26.33 init:
#16 26.33 
#16 26.33 copy-resources:
#16 26.33 
#16 26.33 compile:
#16 26.54 [resolver:resolve] Resolving artifacts
#16 26.56 
#16 26.56 formats-gpl.jar:
#16 26.60 [resolver:install] Using default POM (ome:formats-gpl:8.1.0-SNAPSHOT)
#16 26.60 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.pom
#16 26.60 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.jar
#16 26.60 [resolver:install] Installing ome:formats-gpl:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 26.60 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 26.60 
#16 26.60 deps-bio-formats-plugins:
#16 26.60 
#16 26.60 jar-bio-formats-plugins:
#16 26.69      [echo] isSnapshot = true
#16 26.81 
#16 26.81 init-title:
#16 26.81      [echo] ----------=========== bio-formats_plugins ===========----------
#16 26.81 
#16 26.81 init-timestamp:
#16 26.81 
#16 26.81 init:
#16 26.81 
#16 26.81 copy-resources:
#16 26.82 
#16 26.82 compile:
#16 27.05 [resolver:resolve] Resolving artifacts
#16 27.06 
#16 27.06 bio-formats-plugins.jar:
#16 27.07 [resolver:install] Using default POM (ome:bio-formats_plugins:8.1.0-SNAPSHOT)
#16 27.08 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.pom
#16 27.08 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.jar
#16 27.08 [resolver:install] Installing ome:bio-formats_plugins:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 27.08 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 27.08 
#16 27.08 deps-bio-formats-tools:
#16 27.08 
#16 27.08 jar-bio-formats-tools:
#16 27.17      [echo] isSnapshot = true
#16 27.29 
#16 27.29 init-title:
#16 27.29      [echo] ----------=========== bio-formats-tools ===========----------
#16 27.29 
#16 27.29 init-timestamp:
#16 27.29 
#16 27.29 init:
#16 27.29 
#16 27.29 copy-resources:
#16 27.29 
#16 27.29 compile:
#16 27.53 [resolver:resolve] Resolving artifacts
#16 27.54 
#16 27.54 bio-formats-tools.jar:
#16 27.54 [resolver:install] Using default POM (ome:bio-formats-tools:8.1.0-SNAPSHOT)
#16 27.54 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT.pom
#16 27.55 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT.jar
#16 27.55 [resolver:install] Installing ome:bio-formats-tools:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 27.55 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 27.55 
#16 27.55 deps-tests:
#16 27.55 
#16 27.55 jar-tests:
#16 27.63      [echo] isSnapshot = true
#16 27.76 
#16 27.76 init-title:
#16 27.76      [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 27.76 
#16 27.76 init-timestamp:
#16 27.76 
#16 27.76 init:
#16 27.76 
#16 27.76 copy-resources:
#16 27.76 
#16 27.76 compile:
#16 27.99 [resolver:resolve] Resolving artifacts
#16 28.00 
#16 28.00 tests.jar:
#16 28.01 [resolver:install] Using default POM (ome:test-suite:8.1.0-SNAPSHOT)
#16 28.01 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.1.0-SNAPSHOT/test-suite-8.1.0-SNAPSHOT.pom
#16 28.01 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.1.0-SNAPSHOT/test-suite-8.1.0-SNAPSHOT.jar
#16 28.01 [resolver:install] Installing ome:test-suite:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 28.02 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 28.02 
#16 28.02 jars:
#16 28.02 
#16 28.02 tools:
#16 28.02      [echo] ----------=========== bioformats_package ===========----------
#16 28.11      [echo] isSnapshot = true
#16 28.32 
#16 28.32 init-timestamp:
#16 28.32 
#16 28.32 bundle:
#16 28.56 [resolver:resolve] Resolving artifacts
#16 28.57     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.60     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.0.25-SNAPSHOT/ome-common-6.0.25-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.62     [unzip] Expanding: /home/build/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.64     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.65     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.71     [unzip] Expanding: /home/build/.m2/repository/xpp3/xpp3/1.1.4c/xpp3-1.1.4c.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.73     [unzip] Expanding: /home/build/.m2/repository/com/squareup/okhttp3/okhttp/3.7.0/okhttp-3.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.78     [unzip] Expanding: /home/build/.m2/repository/com/squareup/okio/okio/1.12.0/okio-1.12.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 28.79     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-databind/2.14.2/jackson-databind-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.02     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.14.2/jackson-core-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.07     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.14.2/jackson-annotations-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.09     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/kryo/5.4.0/kryo-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.15     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/reflectasm/1.11.9/reflectasm-1.11.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.16     [unzip] Expanding: /home/build/.m2/repository/org/objenesis/objenesis/3.3/objenesis-3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.17     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/minlog/1.3.1/minlog-1.3.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.17     [unzip] Expanding: /home/build/.m2/repository/joda-time/joda-time/2.12.7/joda-time-2.12.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.34     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/guava/32.0.1-jre/guava-32.0.1-jre.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.90     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/failureaccess/1.0.1/failureaccess-1.0.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.90     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/listenablefuture/9999.0-empty-to-avoid-conflict-with-guava/listenablefuture-9999.0-empty-to-avoid-conflict-with-guava.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.90     [unzip] Expanding: /home/build/.m2/repository/com/google/code/findbugs/jsr305/3.0.2/jsr305-3.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 29.91     [unzip] Expanding: /home/build/.m2/repository/org/checkerframework/checker-qual/3.33.0/checker-qual-3.33.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.00     [unzip] Expanding: /home/build/.m2/repository/com/google/errorprone/error_prone_annotations/2.18.0/error_prone_annotations-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.00     [unzip] Expanding: /home/build/.m2/repository/com/google/j2objc/j2objc-annotations/2.8/j2objc-annotations-2.8.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.01     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-xml/6.3.7-SNAPSHOT/ome-xml-6.3.7-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.07     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/specification/6.3.7-SNAPSHOT/specification-6.3.7-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.18     [unzip] Expanding: /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/formats-api-8.1.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.19     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-codecs/1.1.1-SNAPSHOT/ome-codecs-1.1.1-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.21     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-jai/0.1.5-SNAPSHOT/ome-jai-0.1.5-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.35     [unzip] Expanding: /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/formats-bsd-8.1.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.43     [unzip] Expanding: /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/turbojpeg-8.1.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.47     [unzip] Expanding: /home/build/.m2/repository/org/scijava/native-lib-loader/2.4.0/native-lib-loader-2.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.48     [unzip] Expanding: /home/build/.m2/repository/commons-lang/commons-lang/2.6/commons-lang-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.51     [unzip] Expanding: /home/build/.m2/repository/org/perf4j/perf4j/0.9.16/perf4j-0.9.16.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.54     [unzip] Expanding: /home/build/.m2/repository/cisd/jhdf5/19.04.1/jhdf5-19.04.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.99     [unzip] Expanding: /home/build/.m2/repository/cisd/base/18.09.0/base-18.09.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.01     [unzip] Expanding: /home/build/.m2/repository/commons-io/commons-io/2.6/commons-io-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.05     [unzip] Expanding: /home/build/.m2/repository/org/apache/commons/commons-lang3/3.7/commons-lang3-3.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.12     [unzip] Expanding: /home/build/.m2/repository/com/drewnoakes/metadata-extractor/2.18.0/metadata-extractor-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.23     [unzip] Expanding: /home/build/.m2/repository/com/adobe/xmp/xmpcore/6.1.11/xmpcore-6.1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.24     [unzip] Expanding: /home/build/.m2/repository/ome/jxrlib-all/0.2.4/jxrlib-all-0.2.4.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.26     [unzip] Expanding: /home/build/.m2/repository/org/json/json/20231013/json-20231013.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.27     [unzip] Expanding: /home/build/.m2/repository/xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.51     [unzip] Expanding: /home/build/.m2/repository/xml-apis/xml-apis/1.4.01/xml-apis-1.4.01.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.58     [unzip] Expanding: /home/build/.m2/repository/org/yaml/snakeyaml/2.0/snakeyaml-2.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.64     [unzip] Expanding: /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.74     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/ome-mdbtools-5.3.4-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.76     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/metakit/5.3.8-SNAPSHOT/metakit-5.3.8-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.76     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/ome-poi-5.3.10-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.89     [unzip] Expanding: /home/build/.m2/repository/commons-logging/commons-logging/1.2/commons-logging-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.90     [unzip] Expanding: /home/build/.m2/repository/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.39     [unzip] Expanding: /home/build/.m2/repository/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.41     [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpclient/4.5.13/httpclient-4.5.13.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.53     [unzip] Expanding: /home/build/.m2/repository/commons-codec/commons-codec/1.11/commons-codec-1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.59     [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpmime/4.5.13/httpmime-4.5.13.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.60     [unzip] Expanding: /home/build/.m2/repository/com/google/re2j/re2j/1.3/re2j-1.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.62     [unzip] Expanding: /home/build/.m2/repository/commons-math/commons-math/1.2/commons-math-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.68     [unzip] Expanding: /home/build/.m2/repository/io/airlift/aircompressor/0.27/aircompressor-0.27.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.71     [unzip] Expanding: /home/build/.m2/repository/org/xerial/sqlite-jdbc/3.28.0/sqlite-jdbc-3.28.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.87     [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-forms/1.7.2/jgoodies-forms-1.7.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.89     [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-common/1.7.0/jgoodies-common-1.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.90     [unzip] Expanding: /home/build/.m2/repository/org/slf4j/slf4j-api/2.0.9/slf4j-api-2.0.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.91     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.92     [unzip] Expanding: /home/build/.m2/repository/xalan/serializer/2.7.3/serializer-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.95     [unzip] Expanding: /home/build/.m2/repository/xalan/xalan/2.7.3/xalan-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.35     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-core/1.3.14/logback-core-1.3.14.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.47     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-classic/1.3.14/logback-classic-1.3.14.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.85       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#16 39.35    [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 39.93 [resolver:install] Using default POM (ome:bioformats_package:8.1.0-SNAPSHOT)
#16 39.94 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/8.1.0-SNAPSHOT/bioformats_package-8.1.0-SNAPSHOT.pom
#16 39.94 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/8.1.0-SNAPSHOT/bioformats_package-8.1.0-SNAPSHOT.jar
#16 39.97 [resolver:install] Installing ome:bioformats_package:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 39.97 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#16 39.98 
#16 39.98 BUILD SUCCESSFUL
#16 39.98 Total time: 39 seconds
#16 DONE 40.2s

#17 [13/13] WORKDIR /bio-formats-build/bioformats/components/test-suite
#17 DONE 0.0s

#18 exporting to image
#18 exporting layers
#18 exporting layers 3.3s done
#18 writing image sha256:dd5c9e2829fdec8264fa2a0935a37c6394e91a77f350eeac36eee0d60d0586b7 done
#18 naming to docker.io/snoopycrimecop/bioformats:merge_ci done
#18 DONE 3.5s

 [33m1 warning found (use docker --debug to expand):
[0m - LegacyKeyValueFormat: "ENV key=value" should be used instead of legacy "ENV key value" format (line 30)
Finished: SUCCESS