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#14 377.6 Progress (3): 221/591 kB | 176/282 kB | 115/121 kB
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#14 377.6 Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpcore/4.3.2/httpcore-4.3.2.jar (282 kB at 1.0 MB/s)
#14 377.6 Progress (2): 512/591 kB | 50 kB
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#14 377.6 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-interpolation/1.15/plexus-interpolation-1.15.jar
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#14 377.6 Progress (2): 591 kB | 66/232 kB
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#14 377.6 Progress (3): 209/232 kB | 57/90 kB | 41/60 kB
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#14 377.6 Progress (4): 90 kB | 60 kB | 221/428 kB | 4.1/271 kB
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#14 377.6 Progress (3): 90 kB | 225/428 kB | 4.1/271 kB
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#14 377.7 Downloaded from central: https://repo.maven.apache.org/maven2/ch/qos/logback/logback-classic/1.1.2/logback-classic-1.1.2.jar (271 kB at 823 kB/s)
#14 377.8 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/maven-bundle-plugin/2.5.0/maven-bundle-plugin-2.5.0.pom
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#14 377.9 Downloading from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/bndlib/2.3.0/bndlib-2.3.0.pom
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#14 377.9 Downloading from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/parent/2.3.0/parent-2.3.0.pom
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#14 377.9 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.core/4.3.1/org.osgi.core-4.3.1.pom
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#14 377.9 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-core/2.0.7/maven-core-2.0.7.pom
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#14 378.0 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven/2.0.7/maven-2.0.7.pom
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#14 378.0 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-parent/5/maven-parent-5.pom
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#14 378.0 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-settings/2.0.7/maven-settings-2.0.7.pom
#14 378.0 Progress (1): 2.0 kB
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#14 378.1 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-model/2.0.7/maven-model-2.0.7.pom
#14 378.1 Progress (1): 3.0 kB
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#14 378.1 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-parameter-documenter/2.0.7/maven-plugin-parameter-documenter-2.0.7.pom
#14 378.1 Progress (1): 1.9 kB
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#14 378.1 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/reporting/maven-reporting-api/2.0.7/maven-reporting-api-2.0.7.pom
#14 378.1 Progress (1): 1.8 kB
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#14 378.1 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/reporting/maven-reporting/2.0.7/maven-reporting-2.0.7.pom
#14 378.1 Progress (1): 1.4 kB
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#14 378.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/doxia/doxia-sink-api/1.0-alpha-7/doxia-sink-api-1.0-alpha-7.pom
#14 378.2 Progress (1): 424 B
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/doxia/doxia-sink-api/1.0-alpha-7/doxia-sink-api-1.0-alpha-7.pom (424 B at 18 kB/s)
#14 378.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/doxia/doxia/1.0-alpha-7/doxia-1.0-alpha-7.pom
#14 378.2 Progress (1): 3.9 kB
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#14 378.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-profile/2.0.7/maven-profile-2.0.7.pom
#14 378.2 Progress (1): 2.0 kB
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#14 378.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact/2.0.7/maven-artifact-2.0.7.pom
#14 378.3 Progress (1): 1.6 kB
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#14 378.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-repository-metadata/2.0.7/maven-repository-metadata-2.0.7.pom
#14 378.3 Progress (1): 1.9 kB
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#14 378.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-error-diagnostics/2.0.7/maven-error-diagnostics-2.0.7.pom
#14 378.3 Progress (1): 1.7 kB
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#14 378.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-project/2.0.7/maven-project-2.0.7.pom
#14 378.3 Progress (1): 2.6 kB
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#14 378.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact-manager/2.0.7/maven-artifact-manager-2.0.7.pom
#14 378.4 Progress (1): 2.6 kB
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#14 378.4 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-registry/2.0.7/maven-plugin-registry-2.0.7.pom
#14 378.4 Progress (1): 1.9 kB
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#14 378.4 Downloading from central: https://repo.maven.apache.org/maven2/commons-cli/commons-cli/1.0/commons-cli-1.0.pom
#14 378.4 Progress (1): 2.1 kB
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#14 378.4 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-api/2.0.7/maven-plugin-api-2.0.7.pom
#14 378.4 Progress (1): 1.5 kB
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#14 378.5 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-descriptor/2.0.7/maven-plugin-descriptor-2.0.7.pom
#14 378.5 Progress (1): 2.0 kB
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#14 378.5 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-monitor/2.0.7/maven-monitor-2.0.7.pom
#14 378.5 Progress (1): 1.3 kB
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#14 378.5 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-archiver/2.5/maven-archiver-2.5.pom
#14 378.5 Progress (1): 4.1/4.5 kB
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#14 378.5 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-shared-components/17/maven-shared-components-17.pom
#14 378.5 Progress (1): 4.1/8.7 kB
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#14 378.6 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact/2.0.6/maven-artifact-2.0.6.pom
#14 378.6 Progress (1): 1.6 kB
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#14 378.6 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven/2.0.6/maven-2.0.6.pom
#14 378.6 Progress (1): 4.1/9.0 kB
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#14 378.6 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-model/2.0.6/maven-model-2.0.6.pom
#14 378.6 Progress (1): 3.0 kB
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#14 378.6 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-core/2.0.6/maven-core-2.0.6.pom
#14 378.6 Progress (1): 4.1/6.7 kB
Progress (1): 6.7 kB
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#14 378.7 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-settings/2.0.6/maven-settings-2.0.6.pom
#14 378.7 Progress (1): 2.0 kB
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#14 378.7 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-parameter-documenter/2.0.6/maven-plugin-parameter-documenter-2.0.6.pom
#14 378.7 Progress (1): 1.9 kB
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#14 378.7 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/reporting/maven-reporting-api/2.0.6/maven-reporting-api-2.0.6.pom
#14 378.7 Progress (1): 1.8 kB
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#14 378.7 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/reporting/maven-reporting/2.0.6/maven-reporting-2.0.6.pom
#14 378.7 Progress (1): 1.4 kB
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#14 378.8 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-profile/2.0.6/maven-profile-2.0.6.pom
#14 378.8 Progress (1): 2.0 kB
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#14 378.8 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-repository-metadata/2.0.6/maven-repository-metadata-2.0.6.pom
#14 378.8 Progress (1): 1.9 kB
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#14 378.8 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-error-diagnostics/2.0.6/maven-error-diagnostics-2.0.6.pom
#14 378.8 Progress (1): 1.7 kB
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#14 378.8 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-project/2.0.6/maven-project-2.0.6.pom
#14 378.9 Progress (1): 2.6 kB
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#14 378.9 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact-manager/2.0.6/maven-artifact-manager-2.0.6.pom
#14 378.9 Progress (1): 2.6 kB
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#14 378.9 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-registry/2.0.6/maven-plugin-registry-2.0.6.pom
#14 378.9 Progress (1): 1.9 kB
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#14 378.9 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-api/2.0.6/maven-plugin-api-2.0.6.pom
#14 378.9 Progress (1): 1.5 kB
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#14 378.9 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-descriptor/2.0.6/maven-plugin-descriptor-2.0.6.pom
#14 379.0 Progress (1): 2.0 kB
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#14 379.0 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-monitor/2.0.6/maven-monitor-2.0.6.pom
#14 379.0 Progress (1): 1.3 kB
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#14 379.0 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-archiver/2.1/plexus-archiver-2.1.pom
#14 379.0 Progress (1): 2.8 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-archiver/2.1/plexus-archiver-2.1.pom (2.8 kB at 117 kB/s)
#14 379.0 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/3.0/plexus-utils-3.0.pom
#14 379.0 Progress (1): 4.1 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/3.0/plexus-utils-3.0.pom (4.1 kB at 177 kB/s)
#14 379.0 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-io/2.0.2/plexus-io-2.0.2.pom
#14 379.1 Progress (1): 1.7 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-io/2.0.2/plexus-io-2.0.2.pom (1.7 kB at 72 kB/s)
#14 379.1 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-components/1.1.19/plexus-components-1.1.19.pom
#14 379.1 Progress (1): 2.7 kB
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#14 379.1 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-dependency-tree/2.1/maven-dependency-tree-2.1.pom
#14 379.1 Progress (1): 4.1/6.8 kB
Progress (1): 6.8 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-dependency-tree/2.1/maven-dependency-tree-2.1.pom (6.8 kB at 283 kB/s)
#14 379.1 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-project/2.2.0/maven-project-2.2.0.pom
#14 379.1 Progress (1): 2.8 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-project/2.2.0/maven-project-2.2.0.pom (2.8 kB at 111 kB/s)
#14 379.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven/2.2.0/maven-2.2.0.pom
#14 379.2 Progress (1): 4.1/22 kB
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Progress (1): 22 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven/2.2.0/maven-2.2.0.pom (22 kB at 936 kB/s)
#14 379.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-settings/2.2.0/maven-settings-2.2.0.pom
#14 379.2 Progress (1): 2.2 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-settings/2.2.0/maven-settings-2.2.0.pom (2.2 kB at 95 kB/s)
#14 379.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-model/2.2.0/maven-model-2.2.0.pom
#14 379.2 Progress (1): 3.2 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-model/2.2.0/maven-model-2.2.0.pom (3.2 kB at 141 kB/s)
#14 379.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-profile/2.2.0/maven-profile-2.2.0.pom
#14 379.2 Progress (1): 2.2 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-profile/2.2.0/maven-profile-2.2.0.pom (2.2 kB at 90 kB/s)
#14 379.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact-manager/2.2.0/maven-artifact-manager-2.2.0.pom
#14 379.3 Progress (1): 3.1 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact-manager/2.2.0/maven-artifact-manager-2.2.0.pom (3.1 kB at 129 kB/s)
#14 379.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-repository-metadata/2.2.0/maven-repository-metadata-2.2.0.pom
#14 379.3 Progress (1): 1.9 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-repository-metadata/2.2.0/maven-repository-metadata-2.2.0.pom (1.9 kB at 81 kB/s)
#14 379.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact/2.2.0/maven-artifact-2.2.0.pom
#14 379.3 Progress (1): 1.6 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact/2.2.0/maven-artifact-2.2.0.pom (1.6 kB at 69 kB/s)
#14 379.3 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-registry/2.2.0/maven-plugin-registry-2.2.0.pom
#14 379.3 Progress (1): 1.9 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-registry/2.2.0/maven-plugin-registry-2.2.0.pom (1.9 kB at 74 kB/s)
#14 379.4 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/3.0.10/plexus-utils-3.0.10.pom
#14 379.4 Progress (1): 3.1 kB
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/3.0.10/plexus-utils-3.0.10.pom (3.1 kB at 137 kB/s)
#14 379.4 Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus/3.3/plexus-3.3.pom
#14 379.4 Progress (1): 4.1/20 kB
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#14 379.4 [output clipped, log limit 2MiB reached]
#14 471.1 SLF4J: No SLF4J providers were found.
#14 471.1 SLF4J: Defaulting to no-operation (NOP) logger implementation
#14 471.1 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#14 DONE 481.6s
#15 [11/13] WORKDIR /bio-formats-build/bioformats
#15 DONE 0.1s
#16 [12/13] RUN ant jars tools
#16 0.738 Buildfile: /bio-formats-build/bioformats/build.xml
#16 1.319 [echo] isSnapshot = true
#16 3.427
#16 3.427 copy-jars:
#16 3.427
#16 3.427 deps-formats-api:
#16 3.506 [echo] isSnapshot = true
#16 3.562
#16 3.562 install-pom:
#16 3.737 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.0.0-SNAPSHOT/pom-bio-formats-8.0.0-SNAPSHOT.pom
#16 3.745 [resolver:install] Installing ome:pom-bio-formats:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 3.750 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 3.751
#16 3.751 jar-formats-api:
#16 3.860 [echo] isSnapshot = true
#16 4.042
#16 4.042 init-title:
#16 4.042 [echo] ----------=========== formats-api ===========----------
#16 4.042
#16 4.042 init-timestamp:
#16 4.048
#16 4.048 init:
#16 4.048
#16 4.048 copy-resources:
#16 4.049 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#16 4.062 [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 4.064
#16 4.064 compile:
#16 4.252 [resolver:resolve] Resolving artifacts
#16 4.280 [javac] Compiling 53 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 4.541 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 5.142 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:52: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 5.142 [javac] import loci.common.ReflectedUniverse;
#16 5.142 [javac] ^
#16 5.342 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 5.342 [javac] int currentIndex = r.getCoreIndex();
#16 5.342 [javac] ^
#16 5.342 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.342 [javac] r.setCoreIndex(coreIndex);
#16 5.343 [javac] ^
#16 5.443 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.443 [javac] r.setCoreIndex(currentIndex);
#16 5.443 [javac] ^
#16 5.543 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.543 [javac] public void setCoreIndex(int no) {
#16 5.543 [javac] ^
#16 5.543 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 5.543 [javac] public int getCoreIndex() {
#16 5.543 [javac] ^
#16 5.544 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 5.544 [javac] public int coreIndexToSeries(int index)
#16 5.544 [javac] ^
#16 5.544 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 5.544 [javac] public int seriesToCoreIndex(int series)
#16 5.544 [javac] ^
#16 5.544 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.544 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 5.544 [javac] ^
#16 5.644 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.644 [javac] if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#16 5.644 [javac] ^
#16 5.645 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.645 [javac] if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#16 5.645 [javac] ^
#16 5.645 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.645 [javac] core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 5.645 [javac] ^
#16 5.645 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.645 [javac] core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#16 5.645 [javac] ^
#16 5.745 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 5.745 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 5.745 [javac] ^
#16 5.745 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 5.746 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 5.746 [javac] ^
#16 5.746 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:773: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.746 [javac] public void setCoreIndex(int no) {
#16 5.746 [javac] ^
#16 5.746 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:767: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 5.746 [javac] public int getCoreIndex() {
#16 5.746 [javac] ^
#16 5.746 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:783: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 5.746 [javac] public int coreIndexToSeries(int index) {
#16 5.746 [javac] ^
#16 5.746 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:778: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 5.746 [javac] public int seriesToCoreIndex(int series) {
#16 5.746 [javac] ^
#16 5.746 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:587: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.746 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 5.746 [javac] ^
#16 5.847 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:588: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.847 [javac] return getReader().getCoreMetadataList();
#16 5.847 [javac] ^
#16 5.847 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:768: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 5.847 [javac] return getReader().getCoreIndex();
#16 5.847 [javac] ^
#16 5.847 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:774: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.847 [javac] getReader().setCoreIndex(no);
#16 5.847 [javac] ^
#16 5.847 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:779: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 5.847 [javac] return getReader().seriesToCoreIndex(series);
#16 5.847 [javac] ^
#16 5.847 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:784: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 5.847 [javac] return getReader().coreIndexToSeries(index);
#16 5.847 [javac] ^
#16 5.847 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.847 [javac] public void setCoreIndex(int no) {
#16 5.848 [javac] ^
#16 5.848 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 5.848 [javac] public int getCoreIndex() {
#16 5.848 [javac] ^
#16 5.848 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 5.848 [javac] public int coreIndexToSeries(int index) {
#16 5.848 [javac] ^
#16 5.848 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 5.848 [javac] public int seriesToCoreIndex(int series) {
#16 5.848 [javac] ^
#16 5.848 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.848 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 5.848 [javac] ^
#16 5.848 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.848 [javac] List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 5.848 [javac] ^
#16 5.848 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 5.848 [javac] return reader.getCoreIndex();
#16 5.848 [javac] ^
#16 5.848 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.848 [javac] reader.setCoreIndex(no);
#16 5.848 [javac] ^
#16 5.848 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 5.849 [javac] return reader.seriesToCoreIndex(series);
#16 5.849 [javac] ^
#16 5.849 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 5.849 [javac] return reader.coreIndexToSeries(index);
#16 5.849 [javac] ^
#16 6.049 [javac] Note: Some input files use unchecked or unsafe operations.
#16 6.049 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 6.049 [javac] 36 warnings
#16 6.053
#16 6.053 formats-api.jar:
#16 6.053 [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#16 6.076 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#16 6.106 [resolver:install] Using default POM (ome:formats-api:8.0.0-SNAPSHOT)
#16 6.110 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.pom
#16 6.177 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.jar
#16 6.178 [resolver:install] Installing ome:formats-api:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 6.181 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 6.181
#16 6.181 deps-turbojpeg:
#16 6.181
#16 6.181 jar-turbojpeg:
#16 6.280 [echo] isSnapshot = true
#16 6.445
#16 6.445 init-title:
#16 6.445 [echo] ----------=========== turbojpeg ===========----------
#16 6.445
#16 6.445 init-timestamp:
#16 6.445
#16 6.445 init:
#16 6.445
#16 6.445 copy-resources:
#16 6.446 [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 6.447
#16 6.447 compile:
#16 6.456 [resolver:resolve] Resolving artifacts
#16 6.460 [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 6.662 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 7.348 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:449: warning: [deprecation] finalize() in Object has been deprecated
#16 7.348 [javac] protected void finalize() throws Throwable {
#16 7.348 [javac] ^
#16 7.348 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:455: warning: [deprecation] finalize() in Object has been deprecated
#16 7.348 [javac] super.finalize();
#16 7.348 [javac] ^
#16 7.348 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:504: warning: [deprecation] finalize() in Object has been deprecated
#16 7.348 [javac] protected void finalize() throws Throwable {
#16 7.348 [javac] ^
#16 7.349 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:510: warning: [deprecation] finalize() in Object has been deprecated
#16 7.349 [javac] super.finalize();
#16 7.349 [javac] ^
#16 7.349 [javac] 5 warnings
#16 7.349
#16 7.349 jar:
#16 7.354 [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#16 7.536 [resolver:install] Using default POM (ome:turbojpeg:8.0.0-SNAPSHOT)
#16 7.544 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.pom
#16 7.546 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.jar
#16 7.548 [resolver:install] Installing ome:turbojpeg:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 7.552 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 7.553
#16 7.553 deps-formats-bsd:
#16 7.553
#16 7.553 jar-formats-bsd:
#16 7.646 [echo] isSnapshot = true
#16 7.801
#16 7.801 init-title:
#16 7.801 [echo] ----------=========== formats-bsd ===========----------
#16 7.801
#16 7.801 init-timestamp:
#16 7.801
#16 7.801 init:
#16 7.801
#16 7.801 copy-resources:
#16 7.802 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 7.805 [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 7.806
#16 7.806 compile:
#16 8.012 [resolver:resolve] Resolving artifacts
#16 8.038 [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 8.347 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 9.348 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:45: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 9.348 [javac] import loci.common.ReflectedUniverse;
#16 9.348 [javac] ^
#16 9.648 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.648 [javac] core.size() != reader.getCoreMetadataList().size())
#16 9.648 [javac] ^
#16 9.648 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.648 [javac] List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 9.648 [javac] ^
#16 9.648 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.648 [javac] int n = reader.getCoreMetadataList().size();
#16 9.649 [javac] ^
#16 9.649 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 9.649 [javac] reader.setCoreIndex(coreIndex);
#16 9.649 [javac] ^
#16 9.649 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.649 [javac] int n = reader.getCoreMetadataList().size();
#16 9.649 [javac] ^
#16 9.649 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.649 [javac] int n = reader.getCoreMetadataList().size();
#16 9.649 [javac] ^
#16 9.649 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 9.649 [javac] if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#16 9.649 [javac] ^
#16 9.649 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.649 [javac] int n = reader.getCoreMetadataList().size();
#16 9.649 [javac] ^
#16 9.649 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 9.649 [javac] if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#16 9.649 [javac] ^
#16 9.649 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.649 [javac] int n = reader.getCoreMetadataList().size();
#16 9.649 [javac] ^
#16 9.649 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 9.649 [javac] if (n > 1 || noStitch) reader.setCoreIndex(no);
#16 9.650 [javac] ^
#16 9.650 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 9.650 [javac] return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 9.650 [javac] ^
#16 9.650 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 9.650 [javac] return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 9.650 [javac] ^
#16 9.650 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.650 [javac] return noStitch ? reader.getCoreMetadataList() : core;
#16 9.650 [javac] ^
#16 9.750 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.750 [javac] if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#16 9.750 [javac] ^
#16 9.750 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.750 [javac] seriesCount = reader.getCoreMetadataList().size();
#16 9.750 [javac] ^
#16 9.750 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.750 [javac] if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#16 9.750 [javac] ^
#16 9.751 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.751 [javac] if (reader.getCoreMetadataList().size() > 1) return 0;
#16 9.751 [javac] ^
#16 9.751 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.751 [javac] r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#16 9.751 [javac] ^
#16 9.851 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.851 [javac] int seriesCount = unwrap().getCoreMetadataList().size();
#16 9.851 [javac] ^
#16 9.951 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 9.951 [javac] BitWriter out = new BitWriter();
#16 9.952 [javac] ^
#16 9.952 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 9.952 [javac] BitWriter out = new BitWriter();
#16 9.952 [javac] ^
#16 10.05 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/dicom/DicomTag.java:537: warning: [deprecation] Double(String) in Double has been deprecated
#16 10.05 [javac] return new Double(v);
#16 10.05 [javac] ^
#16 10.65 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:1872: warning: [deprecation] Double(String) in Double has been deprecated
#16 10.65 [javac] return FormatTools.getPhysicalSizeX(new Double(pixelSizeX), UNITS.MILLIMETER);
#16 10.65 [javac] ^
#16 10.65 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:1879: warning: [deprecation] Double(String) in Double has been deprecated
#16 10.65 [javac] return FormatTools.getPhysicalSizeY(new Double(pixelSizeY), UNITS.MILLIMETER);
#16 10.65 [javac] ^
#16 10.65 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:1886: warning: [deprecation] Double(double) in Double has been deprecated
#16 10.65 [javac] return FormatTools.getPhysicalSizeZ(new Double(pixelSizeZ), UNITS.MILLIMETER);
#16 10.65 [javac] ^
#16 10.75 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/ICSReader.java:1142: warning: [deprecation] Integer(int) in Integer has been deprecated
#16 10.75 [javac] channelNames.put(new Integer(channelNames.size()), value);
#16 10.75 [javac] ^
#16 10.95 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:618: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.95 [javac] OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#16 10.95 [javac] ^
#16 10.95 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#16 10.95 [javac] StreamTokenizer st = new StreamTokenizer(in);
#16 10.95 [javac] ^
#16 11.05 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 11.05 [javac] core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 11.05 [javac] ^
#16 11.05 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 11.05 [javac] protected ReflectedUniverse r;
#16 11.05 [javac] ^
#16 11.05 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 11.05 [javac] r = new ReflectedUniverse();
#16 11.05 [javac] ^
#16 11.16 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:948: warning: [deprecation] NM in UNITS has been deprecated
#16 11.16 [javac] wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#16 11.16 [javac] ^
#16 11.16 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:980: warning: [deprecation] MM in UNITS has been deprecated
#16 11.16 [javac] sliceThickness.value = padString(String.valueOf(physicalZ.value(UNITS.MM)));
#16 11.16 [javac] ^
#16 11.16 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:993: warning: [deprecation] MM in UNITS has been deprecated
#16 11.16 [javac] String px = physicalX == null ? "1" : String.valueOf(physicalX.value(UNITS.MM));
#16 11.16 [javac] ^
#16 11.16 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:994: warning: [deprecation] MM in UNITS has been deprecated
#16 11.16 [javac] String py = physicalY == null ? "1" : String.valueOf(physicalY.value(UNITS.MM));
#16 11.16 [javac] ^
#16 11.16 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1013: warning: [deprecation] MM in UNITS has been deprecated
#16 11.16 [javac] volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#16 11.16 [javac] ^
#16 11.16 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1017: warning: [deprecation] MM in UNITS has been deprecated
#16 11.16 [javac] volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#16 11.16 [javac] ^
#16 11.16 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1023: warning: [deprecation] MM in UNITS has been deprecated
#16 11.16 [javac] volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#16 11.16 [javac] ^
#16 11.16 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1071: warning: [deprecation] MM in UNITS has been deprecated
#16 11.16 [javac] offsetX.value = padString(physicalX == null ? "0" : padString(String.valueOf(physicalX.value(UNITS.MM).floatValue() * width)));
#16 11.16 [javac] ^
#16 11.16 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1075: warning: [deprecation] MM in UNITS has been deprecated
#16 11.16 [javac] offsetY.value = padString(physicalY == null ? "0" : padString(String.valueOf(physicalY.value(UNITS.MM).floatValue() * height)));
#16 11.16 [javac] ^
#16 11.26 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#16 11.26 [javac] libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#16 11.26 [javac] ^
#16 11.26 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:320: warning: [deprecation] Double(double) in Double has been deprecated
#16 11.26 [javac] doubleResult[i] = new Double(result.get(i).doubleValue());
#16 11.26 [javac] ^
#16 11.26 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:342: warning: [deprecation] Double(double) in Double has been deprecated
#16 11.26 [javac] result[i] = new Double(readNumber().doubleValue());
#16 11.26 [javac] ^
#16 11.35 [javac] Note: Some input files use unchecked or unsafe operations.
#16 11.35 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 11.35 [javac] 46 warnings
#16 11.35
#16 11.35 formats-bsd.jar:
#16 11.36 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#16 11.46 [resolver:install] Using default POM (ome:formats-bsd:8.0.0-SNAPSHOT)
#16 11.46 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.pom
#16 11.47 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.jar
#16 11.47 [resolver:install] Installing ome:formats-bsd:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 11.47 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 11.47
#16 11.47 deps-formats-gpl:
#16 11.47
#16 11.47 jar-formats-gpl:
#16 11.56 [echo] isSnapshot = true
#16 11.71
#16 11.71 init-title:
#16 11.71 [echo] ----------=========== formats-gpl ===========----------
#16 11.71
#16 11.71 init-timestamp:
#16 11.72
#16 11.72 init:
#16 11.72
#16 11.72 copy-resources:
#16 11.72 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 11.72 [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 11.72
#16 11.72 compile:
#16 12.12 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.pom
#16 12.32 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.pom
#16 12.37 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.pom
#16 12.79 [resolver:resolve] Downloaded https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.pom (0 B at 0.0 KB/sec)
#16 12.79 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.pom
#16 12.81 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.pom
#16 12.83 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.pom
#16 12.96 [resolver:resolve] Downloaded https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.pom (0 B at 0.0 KB/sec)
#16 13.01 [resolver:resolve] Resolving artifacts
#16 13.02 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar
#16 13.02 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar
#16 13.07 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar
#16 13.07 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar
#16 13.10 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar
#16 13.10 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar
#16 13.50 [resolver:resolve] Downloaded https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar (0 B at 0.0 KB/sec)
#16 13.51 [resolver:resolve] Downloaded https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar (0 B at 0.0 KB/sec)
#16 13.53 [javac] Compiling 173 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 13.83 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 14.93 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:50: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 14.93 [javac] import loci.formats.codec.BitWriter;
#16 14.93 [javac] ^
#16 15.03 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:43: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.03 [javac] import loci.formats.codec.BitWriter;
#16 15.03 [javac] ^
#16 16.94 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:1321: warning: non-varargs call of varargs method with inexact argument type for last parameter;
#16 16.94 [javac] LOGGER.trace("Parsing tokens: {}", tokens);
#16 16.94 [javac] ^
#16 16.94 [javac] cast to Object for a varargs call
#16 16.94 [javac] cast to Object[] for a non-varargs call and to suppress this warning
#16 16.94 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1257: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 16.94 [javac] BitWriter bits = null;
#16 16.94 [javac] ^
#16 16.94 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1259: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 16.94 [javac] bits = new BitWriter(planes[index].length / 8);
#16 16.94 [javac] ^
#16 17.34 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java:196: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 17.34 [javac] CoreMetadata ms = new CoreMetadata(helperReader.getCoreMetadataList().get(0));
#16 17.34 [javac] ^
#16 17.74 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 17.74 [javac] BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 17.74 [javac] ^
#16 17.74 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 17.74 [javac] BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 17.74 [javac] ^
#16 18.00 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:199: warning: [deprecation] getAttributes() in Variable has been deprecated
#16 18.00 [javac] List<Attribute> attributes = variable.getAttributes();
#16 18.00 [javac] ^
#16 18.00 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:201: warning: [deprecation] getName() in CDMNode has been deprecated
#16 18.00 [javac] toReturn.put(attribute.getName(), arrayToString(attribute.getValues()));
#16 18.00 [javac] ^
#16 18.00 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:237: warning: [deprecation] getName() in CDMNode has been deprecated
#16 18.00 [javac] String groupName = group.getName();
#16 18.00 [javac] ^
#16 18.00 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:238: warning: [deprecation] getAttributes() in Group has been deprecated
#16 18.00 [javac] List<Attribute> attributes = group.getAttributes();
#16 18.00 [javac] ^
#16 18.00 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:240: warning: [deprecation] getName() in CDMNode has been deprecated
#16 18.00 [javac] String attributeName = attribute.getName();
#16 18.00 [javac] ^
#16 18.00 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:246: warning: [deprecation] getName() in CDMNode has been deprecated
#16 18.00 [javac] String variableName = variable.getName();
#16 18.00 [javac] ^
#16 18.00 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:310: warning: [deprecation] open(String) in NetcdfFile has been deprecated
#16 18.00 [javac] netCDFFile = NetcdfFile.open(currentId);
#16 18.00 [javac] ^
#16 18.00 [javac] Note: Some input files use unchecked or unsafe operations.
#16 18.00 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 18.00 [javac] 16 warnings
#16 18.01
#16 18.01 formats-gpl.jar:
#16 18.01 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#16 18.14 [resolver:install] Using default POM (ome:formats-gpl:8.0.0-SNAPSHOT)
#16 18.15 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.pom
#16 18.15 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.jar
#16 18.15 [resolver:install] Installing ome:formats-gpl:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 18.15 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 18.16
#16 18.16 deps-bio-formats-plugins:
#16 18.16
#16 18.16 jar-bio-formats-plugins:
#16 18.25 [echo] isSnapshot = true
#16 18.40
#16 18.40 init-title:
#16 18.40 [echo] ----------=========== bio-formats_plugins ===========----------
#16 18.40
#16 18.40 init-timestamp:
#16 18.40
#16 18.40 init:
#16 18.40
#16 18.40 copy-resources:
#16 18.40 [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 18.40 [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 18.40
#16 18.40 compile:
#16 18.65 [resolver:resolve] Resolving artifacts
#16 18.66 [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 18.97 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 19.77 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:39: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 19.77 [javac] import loci.common.ReflectedUniverse;
#16 19.77 [javac] ^
#16 19.77 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:40: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 19.77 [javac] import loci.common.ReflectedUniverse;
#16 19.77 [javac] ^
#16 20.17 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:51: warning: [deprecation] STABLE_VERSION in UpgradeChecker has been deprecated
#16 20.17 [javac] "Stable build (" + UpgradeChecker.STABLE_VERSION + ")";
#16 20.17 [javac] ^
#16 20.37 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.37 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 20.37 [javac] ^
#16 20.37 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.37 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 20.37 [javac] ^
#16 20.47 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.47 [javac] ReflectedUniverse ru = new ReflectedUniverse();
#16 20.47 [javac] ^
#16 20.47 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.47 [javac] ReflectedUniverse ru = new ReflectedUniverse();
#16 20.47 [javac] ^
#16 20.77 [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#16 20.77 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 20.77 [javac] 8 warnings
#16 20.88
#16 20.88 bio-formats-plugins.jar:
#16 20.88 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#16 20.91 [resolver:install] Using default POM (ome:bio-formats_plugins:8.0.0-SNAPSHOT)
#16 20.91 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.pom
#16 20.92 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.jar
#16 20.92 [resolver:install] Installing ome:bio-formats_plugins:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 20.92 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 20.92
#16 20.92 deps-bio-formats-tools:
#16 20.92
#16 20.92 jar-bio-formats-tools:
#16 21.01 [echo] isSnapshot = true
#16 21.15
#16 21.15 init-title:
#16 21.15 [echo] ----------=========== bio-formats-tools ===========----------
#16 21.15
#16 21.15 init-timestamp:
#16 21.15
#16 21.15 init:
#16 21.16
#16 21.16 copy-resources:
#16 21.16 [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 21.16
#16 21.16 compile:
#16 21.39 [resolver:resolve] Resolving artifacts
#16 21.40 [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 21.71 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 22.71 [javac] 1 warning
#16 22.71
#16 22.71 bio-formats-tools.jar:
#16 22.72 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#16 22.72 [resolver:install] Using default POM (ome:bio-formats-tools:8.0.0-SNAPSHOT)
#16 22.72 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.pom
#16 22.73 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.jar
#16 22.73 [resolver:install] Installing ome:bio-formats-tools:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 22.73 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 22.73
#16 22.73 deps-tests:
#16 22.73
#16 22.73 jar-tests:
#16 22.82 [echo] isSnapshot = true
#16 22.96
#16 22.96 init-title:
#16 22.96 [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 22.96
#16 22.96 init-timestamp:
#16 22.96
#16 22.96 init:
#16 22.96
#16 22.96 copy-resources:
#16 22.97 [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#16 22.97
#16 22.97 compile:
#16 23.26 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 23.34 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 23.35 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 23.76 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 24.18 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom (0 B at 0.0 KB/sec)
#16 24.29 [resolver:resolve] Resolving artifacts
#16 24.30 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 24.34 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 24.36 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 24.76 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 25.13 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#16 25.14 [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#16 25.45 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 26.35 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:605: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 26.35 [javac] int index = unflattenedReader.getCoreIndex();
#16 26.35 [javac] ^
#16 26.35 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:606: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 26.35 [javac] reader.setCoreIndex(index);
#16 26.35 [javac] ^
#16 26.55 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2247: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 26.55 [javac] config.setSeries(resolutionReader.getCoreIndex());
#16 26.55 [javac] ^
#16 26.55 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2413: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 26.55 [javac] config.setSeries(resolutionReader.getCoreIndex());
#16 26.55 [javac] ^
#16 26.75 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 26.75 [javac] FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#16 26.75 [javac] ^
#16 26.75 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 26.75 [javac] FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#16 26.75 [javac] ^
#16 26.80 [javac] Note: Some input files use unchecked or unsafe operations.
#16 26.80 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 26.80 [javac] 7 warnings
#16 26.80
#16 26.80 tests.jar:
#16 26.81 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#16 26.82 [resolver:install] Using default POM (ome:test-suite:8.0.0-SNAPSHOT)
#16 26.82 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/test-suite-8.0.0-SNAPSHOT.pom
#16 26.82 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/test-suite-8.0.0-SNAPSHOT.jar
#16 26.83 [resolver:install] Installing ome:test-suite:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 26.83 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 26.83
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#16 26.83
#16 26.83 copy-jars:
#16 26.83
#16 26.83 deps-formats-api:
#16 26.88 [echo] isSnapshot = true
#16 26.92
#16 26.92 install-pom:
#16 27.07 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.0.0-SNAPSHOT/pom-bio-formats-8.0.0-SNAPSHOT.pom
#16 27.07 [resolver:install] Installing ome:pom-bio-formats:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 27.07 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 27.07
#16 27.07 jar-formats-api:
#16 27.16 [echo] isSnapshot = true
#16 27.34
#16 27.34 init-title:
#16 27.34 [echo] ----------=========== formats-api ===========----------
#16 27.34
#16 27.34 init-timestamp:
#16 27.34
#16 27.34 init:
#16 27.34
#16 27.34 copy-resources:
#16 27.35
#16 27.35 compile:
#16 27.48 [resolver:resolve] Resolving artifacts
#16 27.49
#16 27.49 formats-api.jar:
#16 27.51 [resolver:install] Using default POM (ome:formats-api:8.0.0-SNAPSHOT)
#16 27.51 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.pom
#16 27.51 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.jar
#16 27.51 [resolver:install] Installing ome:formats-api:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 27.51 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 27.51
#16 27.51 deps-turbojpeg:
#16 27.51
#16 27.51 jar-turbojpeg:
#16 27.60 [echo] isSnapshot = true
#16 27.75
#16 27.75 init-title:
#16 27.75 [echo] ----------=========== turbojpeg ===========----------
#16 27.75
#16 27.75 init-timestamp:
#16 27.75
#16 27.75 init:
#16 27.75
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#16 27.75
#16 27.75 compile:
#16 27.76 [resolver:resolve] Resolving artifacts
#16 27.77
#16 27.77 jar:
#16 27.77 [resolver:install] Using default POM (ome:turbojpeg:8.0.0-SNAPSHOT)
#16 27.78 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.pom
#16 27.78 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.jar
#16 27.78 [resolver:install] Installing ome:turbojpeg:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 27.79 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 27.79
#16 27.79 deps-formats-bsd:
#16 27.79
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#16 27.87 [echo] isSnapshot = true
#16 28.01
#16 28.01 init-title:
#16 28.01 [echo] ----------=========== formats-bsd ===========----------
#16 28.01
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#16 28.01
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#16 28.01
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#16 28.01
#16 28.01 compile:
#16 28.20 [resolver:resolve] Resolving artifacts
#16 28.21
#16 28.21 formats-bsd.jar:
#16 28.25 [resolver:install] Using default POM (ome:formats-bsd:8.0.0-SNAPSHOT)
#16 28.25 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.pom
#16 28.25 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.jar
#16 28.25 [resolver:install] Installing ome:formats-bsd:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 28.25 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 28.26
#16 28.26 deps-formats-gpl:
#16 28.26
#16 28.26 jar-formats-gpl:
#16 28.34 [echo] isSnapshot = true
#16 28.48
#16 28.48 init-title:
#16 28.48 [echo] ----------=========== formats-gpl ===========----------
#16 28.48
#16 28.48 init-timestamp:
#16 28.48
#16 28.48 init:
#16 28.48
#16 28.48 copy-resources:
#16 28.48
#16 28.48 compile:
#16 28.70 [resolver:resolve] Resolving artifacts
#16 28.72
#16 28.72 formats-gpl.jar:
#16 28.75 [resolver:install] Using default POM (ome:formats-gpl:8.0.0-SNAPSHOT)
#16 28.75 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.pom
#16 28.75 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.jar
#16 28.76 [resolver:install] Installing ome:formats-gpl:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 28.76 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 28.76
#16 28.76 deps-bio-formats-plugins:
#16 28.76
#16 28.76 jar-bio-formats-plugins:
#16 28.84 [echo] isSnapshot = true
#16 28.98
#16 28.98 init-title:
#16 28.98 [echo] ----------=========== bio-formats_plugins ===========----------
#16 28.98
#16 28.98 init-timestamp:
#16 28.98
#16 28.98 init:
#16 28.98
#16 28.98 copy-resources:
#16 28.98
#16 28.98 compile:
#16 29.23 [resolver:resolve] Resolving artifacts
#16 29.24
#16 29.24 bio-formats-plugins.jar:
#16 29.26 [resolver:install] Using default POM (ome:bio-formats_plugins:8.0.0-SNAPSHOT)
#16 29.26 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.pom
#16 29.26 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.jar
#16 29.26 [resolver:install] Installing ome:bio-formats_plugins:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 29.26 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 29.27
#16 29.27 deps-bio-formats-tools:
#16 29.27
#16 29.27 jar-bio-formats-tools:
#16 29.35 [echo] isSnapshot = true
#16 29.49
#16 29.49 init-title:
#16 29.49 [echo] ----------=========== bio-formats-tools ===========----------
#16 29.49
#16 29.49 init-timestamp:
#16 29.49
#16 29.49 init:
#16 29.49
#16 29.49 copy-resources:
#16 29.49
#16 29.49 compile:
#16 29.72 [resolver:resolve] Resolving artifacts
#16 29.73
#16 29.73 bio-formats-tools.jar:
#16 29.73 [resolver:install] Using default POM (ome:bio-formats-tools:8.0.0-SNAPSHOT)
#16 29.73 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.pom
#16 29.74 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.jar
#16 29.74 [resolver:install] Installing ome:bio-formats-tools:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 29.74 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 29.74
#16 29.74 deps-tests:
#16 29.74
#16 29.74 jar-tests:
#16 29.83 [echo] isSnapshot = true
#16 29.97
#16 29.97 init-title:
#16 29.97 [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 29.97
#16 29.97 init-timestamp:
#16 29.97
#16 29.97 init:
#16 29.97
#16 29.97 copy-resources:
#16 29.97
#16 29.97 compile:
#16 30.21 [resolver:resolve] Resolving artifacts
#16 30.22
#16 30.22 tests.jar:
#16 30.23 [resolver:install] Using default POM (ome:test-suite:8.0.0-SNAPSHOT)
#16 30.23 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/test-suite-8.0.0-SNAPSHOT.pom
#16 30.23 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/test-suite-8.0.0-SNAPSHOT.jar
#16 30.23 [resolver:install] Installing ome:test-suite:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 30.24 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 30.24
#16 30.24 jars:
#16 30.24
#16 30.24 tools:
#16 30.24 [echo] ----------=========== bioformats_package ===========----------
#16 30.32 [echo] isSnapshot = true
#16 30.47
#16 30.47 init-timestamp:
#16 30.47
#16 30.47 bundle:
#16 30.70 [resolver:resolve] Resolving artifacts
#16 30.71 [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/8.0.0-SNAPSHOT/bio-formats_plugins-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.74 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.0.23-SNAPSHOT/ome-common-6.0.23-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.77 [unzip] Expanding: /home/build/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.79 [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.80 [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.86 [unzip] Expanding: /home/build/.m2/repository/xpp3/xpp3/1.1.4c/xpp3-1.1.4c.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.87 [unzip] Expanding: /home/build/.m2/repository/com/squareup/okhttp3/okhttp/3.7.0/okhttp-3.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.92 [unzip] Expanding: /home/build/.m2/repository/com/squareup/okio/okio/1.12.0/okio-1.12.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 30.93 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-databind/2.14.2/jackson-databind-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.15 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.14.2/jackson-core-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.20 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.14.2/jackson-annotations-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.22 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/kryo/5.4.0/kryo-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.28 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/reflectasm/1.11.9/reflectasm-1.11.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.29 [unzip] Expanding: /home/build/.m2/repository/org/objenesis/objenesis/3.3/objenesis-3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.30 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/minlog/1.3.1/minlog-1.3.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.30 [unzip] Expanding: /home/build/.m2/repository/joda-time/joda-time/2.12.2/joda-time-2.12.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.47 [unzip] Expanding: /home/build/.m2/repository/com/google/guava/guava/32.0.0-jre/guava-32.0.0-jre.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.94 [unzip] Expanding: /home/build/.m2/repository/com/google/guava/failureaccess/1.0.1/failureaccess-1.0.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.94 [unzip] Expanding: /home/build/.m2/repository/com/google/guava/listenablefuture/9999.0-empty-to-avoid-conflict-with-guava/listenablefuture-9999.0-empty-to-avoid-conflict-with-guava.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.94 [unzip] Expanding: /home/build/.m2/repository/com/google/code/findbugs/jsr305/3.0.2/jsr305-3.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.95 [unzip] Expanding: /home/build/.m2/repository/org/checkerframework/checker-qual/3.33.0/checker-qual-3.33.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.03 [unzip] Expanding: /home/build/.m2/repository/com/google/errorprone/error_prone_annotations/2.18.0/error_prone_annotations-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.04 [unzip] Expanding: /home/build/.m2/repository/com/google/j2objc/j2objc-annotations/2.8/j2objc-annotations-2.8.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.04 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-xml/6.3.7-SNAPSHOT/ome-xml-6.3.7-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.10 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/specification/6.3.7-SNAPSHOT/specification-6.3.7-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.15 [unzip] Expanding: /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.17 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-codecs/1.0.4-SNAPSHOT/ome-codecs-1.0.4-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.18 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-jai/0.1.5-SNAPSHOT/ome-jai-0.1.5-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.31 [unzip] Expanding: /home/build/.m2/repository/io/airlift/aircompressor/0.21/aircompressor-0.21.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.34 [unzip] Expanding: /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.41 [unzip] Expanding: /home/build/.m2/repository/ome/turbojpeg/8.0.0-SNAPSHOT/turbojpeg-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.45 [unzip] Expanding: /home/build/.m2/repository/org/scijava/native-lib-loader/2.4.0/native-lib-loader-2.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.45 [unzip] Expanding: /home/build/.m2/repository/commons-lang/commons-lang/2.6/commons-lang-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.49 [unzip] Expanding: /home/build/.m2/repository/org/perf4j/perf4j/0.9.16/perf4j-0.9.16.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.51 [unzip] Expanding: /home/build/.m2/repository/cisd/jhdf5/19.04.1/jhdf5-19.04.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.94 [unzip] Expanding: /home/build/.m2/repository/cisd/base/18.09.0/base-18.09.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.96 [unzip] Expanding: /home/build/.m2/repository/commons-io/commons-io/2.6/commons-io-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.99 [unzip] Expanding: /home/build/.m2/repository/org/apache/commons/commons-lang3/3.7/commons-lang3-3.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.06 [unzip] Expanding: /home/build/.m2/repository/com/drewnoakes/metadata-extractor/2.18.0/metadata-extractor-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.16 [unzip] Expanding: /home/build/.m2/repository/com/adobe/xmp/xmpcore/6.1.11/xmpcore-6.1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.17 [unzip] Expanding: /home/build/.m2/repository/ome/jxrlib-all/0.2.4/jxrlib-all-0.2.4.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.19 [unzip] Expanding: /home/build/.m2/repository/org/json/json/20231013/json-20231013.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.20 [unzip] Expanding: /home/build/.m2/repository/xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.42 [unzip] Expanding: /home/build/.m2/repository/xml-apis/xml-apis/1.4.01/xml-apis-1.4.01.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.49 [unzip] Expanding: /home/build/.m2/repository/org/yaml/snakeyaml/2.0/snakeyaml-2.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.54 [unzip] Expanding: /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.64 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/ome-mdbtools-5.3.4-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.65 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/metakit/5.3.8-SNAPSHOT/metakit-5.3.8-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.65 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/ome-poi-5.3.10-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.78 [unzip] Expanding: /home/build/.m2/repository/commons-logging/commons-logging/1.2/commons-logging-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.79 [unzip] Expanding: /home/build/.m2/repository/edu/ucar/cdm-core/5.3.3/cdm-core-5.3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.22 [unzip] Expanding: /home/build/.m2/repository/edu/ucar/httpservices/5.3.3/httpservices-5.3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.23 [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpclient/4.5.9/httpclient-4.5.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.34 [unzip] Expanding: /home/build/.m2/repository/commons-codec/commons-codec/1.11/commons-codec-1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.39 [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpmime/4.5.9/httpmime-4.5.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.40 [unzip] Expanding: /home/build/.m2/repository/com/google/re2j/re2j/1.3/re2j-1.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.41 [unzip] Expanding: /home/build/.m2/repository/org/xerial/sqlite-jdbc/3.28.0/sqlite-jdbc-3.28.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.57 [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-forms/1.7.2/jgoodies-forms-1.7.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.58 [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-common/1.7.0/jgoodies-common-1.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.59 [unzip] Expanding: /home/build/.m2/repository/org/slf4j/slf4j-api/2.0.9/slf4j-api-2.0.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.60 [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats-tools/8.0.0-SNAPSHOT/bio-formats-tools-8.0.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.60 [unzip] Expanding: /home/build/.m2/repository/xalan/serializer/2.7.3/serializer-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.63 [unzip] Expanding: /home/build/.m2/repository/xalan/xalan/2.7.3/xalan-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.02 [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-core/1.3.14/logback-core-1.3.14.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.13 [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-classic/1.3.14/logback-classic-1.3.14.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.46 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#16 41.01 [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 41.54 [resolver:install] Using default POM (ome:bioformats_package:8.0.0-SNAPSHOT)
#16 41.54 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/8.0.0-SNAPSHOT/bioformats_package-8.0.0-SNAPSHOT.pom
#16 41.54 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/8.0.0-SNAPSHOT/bioformats_package-8.0.0-SNAPSHOT.jar
#16 41.58 [resolver:install] Installing ome:bioformats_package:8.0.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/8.0.0-SNAPSHOT/maven-metadata-local.xml
#16 41.58 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#16 41.58
#16 41.58 BUILD SUCCESSFUL
#16 41.58 Total time: 40 seconds
#16 DONE 43.3s
#17 [13/13] WORKDIR /bio-formats-build/bioformats/components/test-suite
#17 DONE 0.0s
#18 exporting to image
#18 exporting layers
#18 exporting layers 3.4s done
#18 writing image sha256:1abee185994beb5df85fde953eea10b40d5e0df06d74dea86862838b3f01c3c5 done
#18 naming to docker.io/snoopycrimecop/bioformats:merge_ci done
#18 DONE 3.4s
Finished: SUCCESS
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