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Started by user devspace Running as SYSTEM Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /uod/idr-scratch/merge-ci The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /uod/idr-scratch/merge-ci/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url git@github.com:openmicroscopy/data_repo_config.git # timeout=10 Fetching upstream changes from git@github.com:openmicroscopy/data_repo_config.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- git@github.com:openmicroscopy/data_repo_config.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 Checking out Revision f9da8a3234d190248b25050e0ba579974a10767e (refs/remotes/origin/master) > git config core.sparsecheckout # timeout=10 > git checkout -f f9da8a3234d190248b25050e0ba579974a10767e # timeout=10 Commit message: "Merge pull request #614 from melissalinkert/gh-4198" > git rev-list --no-walk f9da8a3234d190248b25050e0ba579974a10767e # timeout=10 [merge-ci] $ /bin/bash -xe /tmp/jenkins5686632744707234002.sh + python3 -mvenv /tmp/venv + source /tmp/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/tmp/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/tmp/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + /tmp/venv/bin/pip install -U pip Requirement already satisfied: pip in /tmp/venv/lib/python3.9/site-packages (24.2) + /tmp/venv/bin/pip install -U scc Requirement already satisfied: scc in /tmp/venv/lib/python3.9/site-packages (0.20.0) Requirement already satisfied: PyGithub>=1.54 in /tmp/venv/lib/python3.9/site-packages (from scc) (2.4.0) Requirement already satisfied: PyYAML>=5.1 in /tmp/venv/lib/python3.9/site-packages (from scc) (6.0.2) Requirement already satisfied: future in /tmp/venv/lib/python3.9/site-packages (from scc) (1.0.0) Requirement already satisfied: ruamel.yaml in /tmp/venv/lib/python3.9/site-packages (from scc) (0.18.6) Requirement already satisfied: ruamel.yaml.jinja2 in /tmp/venv/lib/python3.9/site-packages (from scc) (0.2.7) Requirement already satisfied: six in /tmp/venv/lib/python3.9/site-packages (from scc) (1.16.0) Requirement already satisfied: urllib3<2 in /tmp/venv/lib/python3.9/site-packages (from scc) (1.26.20) Requirement already satisfied: yaclifw<0.3,>=0.2.0 in /tmp/venv/lib/python3.9/site-packages (from scc) (0.2.0) Requirement already satisfied: pynacl>=1.4.0 in /tmp/venv/lib/python3.9/site-packages (from PyGithub>=1.54->scc) (1.5.0) Requirement already satisfied: requests>=2.14.0 in /tmp/venv/lib/python3.9/site-packages (from PyGithub>=1.54->scc) (2.32.3) Requirement already satisfied: pyjwt>=2.4.0 in /tmp/venv/lib/python3.9/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (2.9.0) Requirement already satisfied: typing-extensions>=4.0.0 in /tmp/venv/lib/python3.9/site-packages (from PyGithub>=1.54->scc) (4.12.2) Requirement already satisfied: Deprecated in /tmp/venv/lib/python3.9/site-packages (from PyGithub>=1.54->scc) (1.2.14) Requirement already satisfied: ruamel.yaml.clib>=0.2.7 in /tmp/venv/lib/python3.9/site-packages (from ruamel.yaml->scc) (0.2.8) Requirement already satisfied: cryptography>=3.4.0 in /tmp/venv/lib/python3.9/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (43.0.1) Requirement already satisfied: cffi>=1.4.1 in /tmp/venv/lib/python3.9/site-packages (from pynacl>=1.4.0->PyGithub>=1.54->scc) (1.17.1) Requirement already satisfied: charset-normalizer<4,>=2 in /tmp/venv/lib/python3.9/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.3.2) Requirement already satisfied: idna<4,>=2.5 in /tmp/venv/lib/python3.9/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.8) Requirement already satisfied: certifi>=2017.4.17 in /tmp/venv/lib/python3.9/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (2024.8.30) Requirement already satisfied: wrapt<2,>=1.10 in /tmp/venv/lib/python3.9/site-packages (from Deprecated->PyGithub>=1.54->scc) (1.16.0) Requirement already satisfied: pycparser in /tmp/venv/lib/python3.9/site-packages (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) (2.22) + test -e src + /tmp/venv/bin/scc merge master --no-ask --reset --comment --push merge_ci 2024-09-11 09:14:50,723 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-09-11 09:14:50,723 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-09-11 09:14:50,723 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-09-11 09:14:50,723 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-09-11 09:14:50,723 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-09-11 09:15:06,930 [ scc.git] INFO Conflict detection failed 2024-09-11 09:15:07,384 [ scc.git] INFO - PR 624 melissalinkert 'Add datasets provided in https://github.com/ome/bioformats/pull/4205' Conflicting PR. Removed from build [DATA_REPO_CONFIG-merge#214](https://merge-ci.openmicroscopy.org/jenkins/job/DATA_REPO_CONFIG-merge/214/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/DATA_REPO_CONFIG-merge/214/consoleText) for more details. Possible conflicts: - Conflict detection failed - None --conflicts Traceback (most recent call last): File "/tmp/venv/lib64/python3.9/site-packages/scc/main.py", line 64, in entry_point main("scc", items=[ File "/tmp/venv/lib64/python3.9/site-packages/yaclifw/framework.py", line 188, in main ns.func(ns) File "/tmp/venv/lib64/python3.9/site-packages/scc/git.py", line 3332, in __call__ self.merge(args, self.main_repo) File "/tmp/venv/lib64/python3.9/site-packages/scc/git.py", line 3357, in merge updated, merge_msg = main_repo.rmerge( File "/tmp/venv/lib64/python3.9/site-packages/scc/git.py", line 1861, in rmerge summary_update = self.summary_commit( File "/tmp/venv/lib64/python3.9/site-packages/scc/git.py", line 1924, in summary_commit self.call("git", "commit", "-a", "-n", "-m", commit_message) File "/tmp/venv/lib64/python3.9/site-packages/scc/git.py", line 1162, in call return self.wrap_call(self.debugWrap, *command, **kwargs) File "/tmp/venv/lib64/python3.9/site-packages/scc/git.py", line 1187, in wrap_call raise Exception("rc=%s" % rc) Exception: rc=1 Build step 'Execute shell' marked build as failure Finished: FAILURE