![[Jenkins]](/jenkins/static/d0200910/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 97 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 17debd0389692e2455795d3c9d15b57151d5d590 (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 17debd0389692e2455795d3c9d15b57151d5d590 # timeout=10 Commit message: "Merge pull request #372 from ome/dependabot/submodules/omero-test-infra-7688c54" > git rev-list --no-walk 17debd0389692e2455795d3c9d15b57151d5d590 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 86 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.6.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.6.2-py3-none-any.whl (164 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl (3.9 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.6.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.8 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-06-08 00:41:59,236 [ scc.config] DEBUG Found github.token 2024-06-08 00:41:59,239 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-06-08 00:41:59,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:41:59,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:42:00,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-06-08 00:42:00,277 [ scc.gh] DEBUG 4659 remaining from 5000 (Reset at 01:06 2024-06-08 00:42:00,278 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-08 00:42:00,282 [ scc.git] DEBUG Check current status 2024-06-08 00:42:00,283 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:42:00,286 [ scc.git] DEBUG 17debd0 Merge pull request #372 from ome/dependabot/submodules/omero-test-infra-7688c54 2024-06-08 00:42:00,286 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:42:00,335 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-08 00:42:00,337 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-08 00:42:00,340 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-08 00:42:00,343 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-08 00:42:00,387 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-06-08 00:42:00,391 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-08 00:42:00,395 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-08 00:42:00,400 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-06-08 00:42:00,405 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-08 00:42:00,409 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-08 00:42:00,415 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-08 00:42:00,420 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-08 00:42:00,425 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-08 00:42:00,430 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-08 00:42:00,436 [ scc.git] DEBUG 7688c540375cf05252c31f216e0248b69a2659c2 omero-test-infra (v0.6.3-57-g7688c54) 2024-06-08 00:42:00,440 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-08 00:42:00,444 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-08 00:42:00,447 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-08 00:42:00,450 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-08 00:42:00,453 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-08 00:42:00,456 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-08 00:42:00,460 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-08 00:42:00,465 [ scc.config] DEBUG Found remote.origin.url 2024-06-08 00:42:00,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-06-08 00:42:01,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-08 00:42:01,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-08 00:42:02,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-08 00:42:02,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-08 00:42:02,480 [ scc.git] DEBUG Resetting... 2024-06-08 00:42:02,481 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-06-08 00:42:02,490 [ scc.git] DEBUG HEAD is now at 17debd0 Merge pull request #372 from ome/dependabot/submodules/omero-test-infra-7688c54 2024-06-08 00:42:02,490 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-06-08 00:42:02,600 [ scc.git] DEBUG Check current status 2024-06-08 00:42:02,600 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:42:02,606 [ scc.git] DEBUG 17debd0 Merge pull request #372 from ome/dependabot/submodules/omero-test-infra-7688c54 2024-06-08 00:42:02,606 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:42:02,657 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-08 00:42:02,660 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-08 00:42:02,663 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-08 00:42:02,666 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-08 00:42:02,672 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-06-08 00:42:02,675 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-08 00:42:02,678 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-08 00:42:02,681 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-06-08 00:42:02,684 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-08 00:42:02,688 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-08 00:42:02,691 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-08 00:42:02,693 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-08 00:42:02,697 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-08 00:42:02,700 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-08 00:42:02,704 [ scc.git] DEBUG 7688c540375cf05252c31f216e0248b69a2659c2 omero-test-infra (v0.6.3-57-g7688c54) 2024-06-08 00:42:02,707 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-08 00:42:02,710 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-08 00:42:02,713 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-08 00:42:02,716 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-08 00:42:02,718 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-08 00:42:02,721 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-08 00:42:02,725 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-08 00:42:02,726 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-06-08 00:42:02,726 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-06-08 00:42:02,726 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-06-08 00:42:02,726 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-06-08 00:42:02,726 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-06-08 00:42:02,726 [ scc.repo] DEBUG ## PRs found: 2024-06-08 00:42:02,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-06-08 00:42:03,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/373 HTTP/1.1" 200 None 2024-06-08 00:42:03,453 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-08 00:42:03,453 [ scc.repo] DEBUG - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' 2024-06-08 00:42:03,453 [ scc.repo] DEBUG ## Branches found: 2024-06-08 00:42:03,453 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:42:03,454 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:42:03,459 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-08 00:42:03,463 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-08 00:42:03,464 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-08 00:42:03,470 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-08 00:42:03,476 [ scc.git] DEBUG Already up to date. 2024-06-08 00:42:03,476 [ scc.git] DEBUG Calling 'git fetch origin pull/373/head' 2024-06-08 00:42:03,865 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-06-08 00:42:03,866 [ scc.git] DEBUG * branch refs/pull/373/head -> FETCH_HEAD 2024-06-08 00:42:03,873 [ scc.git] DEBUG ## Unique users: [] 2024-06-08 00:42:03,873 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:42:03,873 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:42:03,878 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c8279eaae4892995e532fa290a1f76ace85afdbc' 2024-06-08 00:42:03,883 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:42:03,888 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 373 (Bump omero-test-infra from `7688c54` to `cda3ec6`) c8279eaae4892995e532fa290a1f76ace85afdbc' 2024-06-08 00:42:03,904 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-08 00:42:03,907 [ scc.git] DEBUG omero-test-infra | 2 +- 2024-06-08 00:42:03,907 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-06-08 00:42:04,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:42:04,072 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-08 00:42:04,132 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2024-06-08 00:42:04,133 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:42:04,133 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:42:04,138 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-08 00:42:04,772 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85b5dbbc40> has no local changes 2024-06-08 00:42:04,773 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' Generated by OMERO-plugins-push#89 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/)' 2024-06-08 00:42:04,840 [ scc.git] DEBUG [detached HEAD 33c9a95] merge master -Dorg -Snone 2024-06-08 00:42:04,840 [ scc.merge] INFO Repository: ome/omero-plugins 2024-06-08 00:42:04,840 [ scc.merge] INFO Already up to date. 2024-06-08 00:42:04,841 [ scc.merge] INFO 2024-06-08 00:42:04,841 [ scc.merge] INFO Merged PRs: 2024-06-08 00:42:04,841 [ scc.merge] INFO - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' 2024-06-08 00:42:04,841 [ scc.merge] INFO 2024-06-08 00:42:04,841 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-06-08 00:42:04,841 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-06-08 00:42:14,089 [ scc.config] DEBUG Found github.token 2024-06-08 00:42:14,092 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-06-08 00:42:14,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:42:14,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:42:15,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-06-08 00:42:15,130 [ scc.gh] DEBUG 4649 remaining from 5000 (Reset at 01:06 2024-06-08 00:42:15,131 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-08 00:42:15,137 [ scc.git] DEBUG Check current status 2024-06-08 00:42:15,137 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:42:15,143 [ scc.git] DEBUG 33c9a95 merge master -Dorg -Snone 2024-06-08 00:42:15,143 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:42:15,206 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-08 00:42:15,210 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-08 00:42:15,214 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-08 00:42:15,218 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-08 00:42:15,227 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-06-08 00:42:15,231 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-08 00:42:15,235 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-08 00:42:15,238 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-06-08 00:42:15,242 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-08 00:42:15,245 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-08 00:42:15,248 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-08 00:42:15,252 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-08 00:42:15,255 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-08 00:42:15,258 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-08 00:42:15,262 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-08 00:42:15,265 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-08 00:42:15,268 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-08 00:42:15,270 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-08 00:42:15,273 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-08 00:42:15,276 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-08 00:42:15,279 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-08 00:42:15,282 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-08 00:42:15,287 [ scc.config] DEBUG Found remote.origin.url 2024-06-08 00:42:15,288 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-06-08 00:42:15,291 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-06-08 00:42:15,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-06-08 00:42:16,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-08 00:42:16,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-08 00:42:16,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-08 00:42:17,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-08 00:42:17,329 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:42:17,417 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-08 00:42:17,417 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-08 00:42:17,422 [ scc.git] DEBUG Check current status 2024-06-08 00:42:17,422 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:42:17,426 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-06-08 00:42:17,426 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:42:17,481 [ scc.config] DEBUG Found remote.origin.url 2024-06-08 00:42:17,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-06-08 00:42:18,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-08 00:42:18,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-08 00:42:19,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-08 00:42:19,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-08 00:42:19,561 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:42:19,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:42:19,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-08 00:42:19,600 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-08 00:42:19,604 [ scc.git] DEBUG Check current status 2024-06-08 00:42:19,604 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:42:19,608 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-06-08 00:42:19,608 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:42:19,653 [ scc.config] DEBUG Found remote.origin.url 2024-06-08 00:42:20,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-06-08 00:42:20,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-08 00:42:20,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-08 00:42:21,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-08 00:42:21,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-08 00:42:21,760 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:42:21,801 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:42:21,802 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-08 00:42:21,802 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-08 00:42:21,806 [ scc.git] DEBUG Check current status 2024-06-08 00:42:21,806 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:42:21,810 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-06-08 00:42:21,810 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:42:21,855 [ scc.config] DEBUG Found remote.origin.url 2024-06-08 00:42:22,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-06-08 00:42:22,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-08 00:42:23,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-08 00:42:23,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-08 00:42:23,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-08 00:42:23,990 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:42:24,030 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:42:24,031 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-08 00:42:24,031 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-08 00:42:24,035 [ scc.git] DEBUG Check current status 2024-06-08 00:42:24,036 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:42:24,040 [ scc.git] DEBUG 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-08 00:42:24,040 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:42:24,084 [ scc.config] DEBUG Found remote.origin.url 2024-06-08 00:42:24,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-06-08 00:42:24,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-08 00:42:25,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-08 00:42:25,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-08 00:42:26,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-08 00:42:26,238 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:42:26,279 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:42:26,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-08 00:42:26,280 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-08 00:42:26,284 [ scc.git] DEBUG Check current status 2024-06-08 00:42:26,284 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:42:26,288 [ scc.git] DEBUG 3d9e3b87 Merge pull request #554 from jburel/update_publish 2024-06-08 00:42:26,288 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:42:26,327 [ scc.config] DEBUG Found remote.origin.url 2024-06-08 00:42:26,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-06-08 00:42:27,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-08 00:42:27,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-08 00:42:27,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-08 00:42:28,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-08 00:42:28,452 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:42:28,499 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:42:28,500 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-08 00:42:28,500 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-08 00:42:28,505 [ scc.git] DEBUG Check current status 2024-06-08 00:42:28,505 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:42:28,510 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-06-08 00:42:28,510 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:42:28,557 [ scc.config] DEBUG Found remote.origin.url 2024-06-08 00:42:28,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-06-08 00:42:29,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-08 00:42:29,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-08 00:42:30,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-08 00:42:30,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-08 00:42:30,678 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:42:30,721 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:42:30,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-08 00:42:30,722 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-08 00:42:30,729 [ scc.git] DEBUG Check current status 2024-06-08 00:42:30,729 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:42:30,736 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-06-08 00:42:30,736 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:42:30,787 [ scc.config] DEBUG Found remote.origin.url 2024-06-08 00:42:31,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-06-08 00:42:31,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-08 00:42:32,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-08 00:42:32,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-08 00:42:32,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-08 00:42:32,869 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:42:32,909 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:42:32,910 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-08 00:42:32,910 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-08 00:42:32,914 [ scc.git] DEBUG Check current status 2024-06-08 00:42:32,914 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:42:32,918 [ scc.git] DEBUG 7b7a637 add dev to version 2024-06-08 00:42:32,918 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:42:32,962 [ scc.config] DEBUG Found remote.origin.url 2024-06-08 00:42:33,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-06-08 00:42:33,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-08 00:42:34,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-08 00:42:34,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-08 00:42:35,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-08 00:42:35,108 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:42:35,149 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:42:35,150 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-08 00:42:35,150 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-08 00:42:35,155 [ scc.git] DEBUG Check current status 2024-06-08 00:42:35,155 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:42:35,160 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-06-08 00:42:35,160 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:42:35,205 [ scc.config] DEBUG Found remote.origin.url 2024-06-08 00:42:35,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-06-08 00:42:36,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-08 00:42:36,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-08 00:42:36,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-08 00:42:37,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-08 00:42:37,274 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:42:37,314 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:42:37,314 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-08 00:42:37,314 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-08 00:42:37,319 [ scc.git] DEBUG Check current status 2024-06-08 00:42:37,319 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:42:37,323 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-08 00:42:37,324 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:42:37,369 [ scc.config] DEBUG Found remote.origin.url 2024-06-08 00:42:37,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-06-08 00:42:38,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-08 00:42:38,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-08 00:42:39,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-08 00:42:39,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-08 00:42:39,457 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:42:39,496 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:42:39,496 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-08 00:42:39,496 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-08 00:42:39,501 [ scc.git] DEBUG Check current status 2024-06-08 00:42:39,501 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:42:39,505 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-06-08 00:42:39,505 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:42:39,546 [ scc.config] DEBUG Found remote.origin.url 2024-06-08 00:42:39,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-06-08 00:42:40,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-08 00:42:40,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-08 00:42:41,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-08 00:42:41,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-08 00:42:41,693 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:42:41,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:42:41,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-08 00:42:41,731 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-08 00:42:41,736 [ scc.git] DEBUG Check current status 2024-06-08 00:42:41,736 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:42:41,740 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-06-08 00:42:41,741 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:42:41,790 [ scc.config] DEBUG Found remote.origin.url 2024-06-08 00:42:42,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-06-08 00:42:42,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-08 00:42:43,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-08 00:42:43,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-08 00:42:44,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-08 00:42:44,074 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:42:44,163 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:42:44,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-08 00:42:44,165 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-08 00:42:44,178 [ scc.git] DEBUG Check current status 2024-06-08 00:42:44,178 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:42:44,195 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-06-08 00:42:44,196 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:42:44,270 [ scc.config] DEBUG Found remote.origin.url 2024-06-08 00:42:44,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-06-08 00:42:45,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-08 00:42:45,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-08 00:42:45,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-08 00:42:46,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-08 00:42:46,304 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:42:46,344 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:42:46,345 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-08 00:42:46,345 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-08 00:42:46,349 [ scc.git] DEBUG Check current status 2024-06-08 00:42:46,350 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:42:46,354 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-06-08 00:42:46,354 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:42:46,400 [ scc.config] DEBUG Found remote.origin.url 2024-06-08 00:42:46,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-06-08 00:42:47,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-08 00:42:47,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-08 00:42:48,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-08 00:42:48,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-08 00:42:48,591 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:42:48,637 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:42:48,638 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-08 00:42:48,638 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-08 00:42:48,643 [ scc.git] DEBUG Check current status 2024-06-08 00:42:48,643 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:42:48,649 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-06-08 00:42:48,649 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:42:48,702 [ scc.config] DEBUG Found remote.origin.url 2024-06-08 00:42:49,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-08 00:42:49,027 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-08 00:42:49,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-06-08 00:42:49,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-08 00:42:50,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-08 00:42:50,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-08 00:42:50,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-08 00:42:50,987 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:42:51,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:42:51,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-08 00:42:51,026 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-08 00:42:51,031 [ scc.git] DEBUG Check current status 2024-06-08 00:42:51,031 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:42:51,036 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-06-08 00:42:51,036 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:42:51,077 [ scc.config] DEBUG Found remote.origin.url 2024-06-08 00:42:51,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-06-08 00:42:51,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-08 00:42:52,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-08 00:42:52,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-08 00:42:53,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-08 00:42:53,231 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:42:53,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:42:53,269 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-08 00:42:53,269 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-08 00:42:53,274 [ scc.git] DEBUG Check current status 2024-06-08 00:42:53,274 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:42:53,279 [ scc.git] DEBUG deab817 update setup-python to v4 2024-06-08 00:42:53,279 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:42:53,325 [ scc.config] DEBUG Found remote.origin.url 2024-06-08 00:42:53,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-06-08 00:42:54,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-08 00:42:54,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-08 00:42:55,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-08 00:42:55,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-08 00:42:55,445 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:42:55,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:42:55,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-08 00:42:55,488 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-08 00:42:55,494 [ scc.git] DEBUG Check current status 2024-06-08 00:42:55,494 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:42:55,499 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-06-08 00:42:55,499 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:42:55,547 [ scc.config] DEBUG Found remote.origin.url 2024-06-08 00:42:55,547 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-06-08 00:42:55,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-06-08 00:42:56,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-08 00:42:56,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-08 00:42:57,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-08 00:42:57,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-08 00:42:57,654 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:42:57,696 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:42:57,697 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-08 00:42:57,697 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-08 00:42:57,701 [ scc.git] DEBUG Check current status 2024-06-08 00:42:57,702 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:42:57,707 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-06-08 00:42:57,707 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:42:57,754 [ scc.config] DEBUG Found remote.origin.url 2024-06-08 00:42:58,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-08 00:42:58,082 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-08 00:42:58,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-06-08 00:42:58,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-08 00:42:59,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-08 00:42:59,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-08 00:43:00,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-08 00:43:00,041 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:43:00,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:43:00,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-08 00:43:00,086 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-08 00:43:00,092 [ scc.git] DEBUG Check current status 2024-06-08 00:43:00,092 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:43:00,098 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-06-08 00:43:00,098 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:43:00,143 [ scc.config] DEBUG Found remote.origin.url 2024-06-08 00:43:00,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-08 00:43:00,466 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-08 00:43:00,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-06-08 00:43:01,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-08 00:43:01,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-08 00:43:02,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-08 00:43:02,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-08 00:43:02,458 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:43:02,501 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:43:02,502 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-08 00:43:02,502 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-08 00:43:02,507 [ scc.git] DEBUG Check current status 2024-06-08 00:43:02,507 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:43:02,513 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-06-08 00:43:02,513 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:43:02,560 [ scc.config] DEBUG Found remote.origin.url 2024-06-08 00:43:02,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-06-08 00:43:03,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-08 00:43:03,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-08 00:43:04,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-08 00:43:04,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-08 00:43:04,631 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:43:04,678 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:43:04,678 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-08 00:43:04,679 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-08 00:43:04,685 [ scc.git] DEBUG Check current status 2024-06-08 00:43:04,685 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:43:04,702 [ scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-06-08 00:43:04,702 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:43:04,768 [ scc.config] DEBUG Found remote.origin.url 2024-06-08 00:43:04,769 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-06-08 00:43:05,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-08 00:43:05,108 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-08 00:43:05,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-06-08 00:43:05,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-08 00:43:06,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-08 00:43:06,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-08 00:43:07,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-08 00:43:07,069 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:43:07,118 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:43:07,119 [ scc.git] DEBUG Resetting... 2024-06-08 00:43:07,119 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-06-08 00:43:07,130 [ scc.git] DEBUG HEAD is now at 33c9a95 merge master -Dorg -Snone 2024-06-08 00:43:07,131 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-06-08 00:43:07,248 [ scc.git] DEBUG Check current status 2024-06-08 00:43:07,249 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-08 00:43:07,255 [ scc.git] DEBUG 33c9a95 merge master -Dorg -Snone 2024-06-08 00:43:07,255 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-08 00:43:07,310 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-08 00:43:07,313 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-08 00:43:07,316 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-08 00:43:07,321 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-08 00:43:07,329 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-06-08 00:43:07,332 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-08 00:43:07,335 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-08 00:43:07,338 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-06-08 00:43:07,342 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-08 00:43:07,345 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-08 00:43:07,348 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-08 00:43:07,350 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-08 00:43:07,354 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-08 00:43:07,357 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-08 00:43:07,361 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-08 00:43:07,364 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-08 00:43:07,367 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-08 00:43:07,370 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-08 00:43:07,373 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-08 00:43:07,376 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-08 00:43:07,379 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-08 00:43:07,383 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-08 00:43:07,384 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-06-08 00:43:07,384 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-06-08 00:43:07,384 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-06-08 00:43:07,384 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-06-08 00:43:07,385 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-06-08 00:43:07,385 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-06-08 00:43:07,385 [ scc.repo] DEBUG ## PRs found: 2024-06-08 00:43:07,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-06-08 00:43:08,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/373 HTTP/1.1" 200 None 2024-06-08 00:43:08,122 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-08 00:43:08,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c8279eaae4892995e532fa290a1f76ace85afdbc HTTP/1.1" 200 None 2024-06-08 00:43:09,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c8279eaae4892995e532fa290a1f76ace85afdbc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:43:09,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c8279eaae4892995e532fa290a1f76ace85afdbc HTTP/1.1" 200 None 2024-06-08 00:43:10,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/c8279eaae4892995e532fa290a1f76ace85afdbc?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:43:10,092 [ scc.repo] DEBUG - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' 2024-06-08 00:43:10,093 [ scc.repo] DEBUG ## Branches found: 2024-06-08 00:43:10,093 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:43:10,093 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:43:10,099 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-08 00:43:10,104 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-08 00:43:10,104 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-08 00:43:10,110 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-08 00:43:10,116 [ scc.git] DEBUG Already up to date. 2024-06-08 00:43:10,116 [ scc.git] DEBUG Calling 'git fetch origin pull/373/head' 2024-06-08 00:43:10,530 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-06-08 00:43:10,530 [ scc.git] DEBUG * branch refs/pull/373/head -> FETCH_HEAD 2024-06-08 00:43:10,536 [ scc.git] DEBUG ## Unique users: [] 2024-06-08 00:43:10,536 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:43:10,536 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:43:10,542 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c8279eaae4892995e532fa290a1f76ace85afdbc' 2024-06-08 00:43:10,548 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:43:10,553 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 373 (Bump omero-test-infra from `7688c54` to `cda3ec6`) c8279eaae4892995e532fa290a1f76ace85afdbc' 2024-06-08 00:43:10,559 [ scc.git] DEBUG Already up to date. 2024-06-08 00:43:10,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:43:10,764 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-08 00:43:10,826 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:43:10,826 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:43:10,832 [ scc.repo] DEBUG ## PRs found: 2024-06-08 00:43:11,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-06-08 00:43:11,275 [ scc.repo] DEBUG ## Branches found: 2024-06-08 00:43:11,275 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-08 00:43:11,275 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:43:11,276 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:43:11,281 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-08 00:43:11,287 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-08 00:43:11,287 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-08 00:43:11,294 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-08 00:43:11,316 [ scc.git] DEBUG Already up to date. 2024-06-08 00:43:11,316 [ scc.git] DEBUG ## Unique users: [] 2024-06-08 00:43:11,316 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:43:11,316 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:43:11,322 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-08 00:43:11,369 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:43:11,369 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:43:11,376 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:43:11,419 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-08 00:43:11,426 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f71b82df460> has no local changes 2024-06-08 00:43:11,427 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#89 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/)' 2024-06-08 00:43:11,436 [ scc.git] DEBUG [detached HEAD 43b6ea1] merge master -Dorg -Ssuccess-only 2024-06-08 00:43:11,437 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:43:11,437 [ scc.repo] DEBUG ## PRs found: 2024-06-08 00:43:11,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-06-08 00:43:12,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-06-08 00:43:12,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-06-08 00:43:13,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-06-08 00:43:13,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:43:14,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-08 00:43:14,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-06-08 00:43:15,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:43:15,325 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-06-08 00:43:15,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-06-08 00:43:16,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-06-08 00:43:16,321 [ scc.repo] DEBUG ## Branches found: 2024-06-08 00:43:16,321 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-08 00:43:16,321 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:43:16,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:43:16,327 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-08 00:43:16,331 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-08 00:43:16,331 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-08 00:43:16,336 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-08 00:43:16,352 [ scc.git] DEBUG Already up to date. 2024-06-08 00:43:16,353 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-06-08 00:43:16,719 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-06-08 00:43:16,719 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-06-08 00:43:16,724 [ scc.git] DEBUG ## Unique users: [] 2024-06-08 00:43:16,724 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:43:16,724 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:43:16,729 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-06-08 00:43:16,735 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:43:16,743 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-06-08 00:43:16,753 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-08 00:43:16,755 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-06-08 00:43:16,755 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-06-08 00:43:16,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:43:16,921 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-08 00:43:16,962 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:43:16,963 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:43:16,968 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:43:17,007 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-08 00:43:17,013 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f71b7212730> has no local changes 2024-06-08 00:43:17,014 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#89 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/)' 2024-06-08 00:43:17,021 [ scc.git] DEBUG [detached HEAD 9218d38] merge master -Dorg -Ssuccess-only 2024-06-08 00:43:17,021 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:43:17,022 [ scc.repo] DEBUG ## PRs found: 2024-06-08 00:43:17,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-06-08 00:43:17,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64 HTTP/1.1" 200 None 2024-06-08 00:43:18,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64/comments HTTP/1.1" 200 None 2024-06-08 00:43:18,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-06-08 00:43:19,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:43:19,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-06-08 00:43:20,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/6dffdfe0e7ed620e791de943fad823e440b40639?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:43:20,359 [ scc.repo] DEBUG - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-06-08 00:43:20,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/63 HTTP/1.1" 200 None 2024-06-08 00:43:21,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-06-08 00:43:21,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:43:22,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-06-08 00:43:22,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:43:22,655 [ scc.repo] DEBUG - PR 63 sbesson 'Remove python-future dependency' 2024-06-08 00:43:23,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-06-08 00:43:23,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-06-08 00:43:24,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-06-08 00:43:24,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-06-08 00:43:25,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-06-08 00:43:25,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:43:25,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-06-08 00:43:26,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:43:26,372 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-06-08 00:43:26,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-06-08 00:43:27,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-06-08 00:43:27,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-06-08 00:43:28,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-06-08 00:43:28,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-06-08 00:43:28,682 [ scc.repo] DEBUG ## Branches found: 2024-06-08 00:43:28,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-08 00:43:28,682 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:43:28,682 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:43:28,688 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-08 00:43:28,693 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-08 00:43:28,693 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-08 00:43:28,698 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-08 00:43:28,722 [ scc.git] DEBUG Already up to date. 2024-06-08 00:43:28,723 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-06-08 00:43:29,111 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-08 00:43:29,111 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-06-08 00:43:29,116 [ scc.git] DEBUG Calling 'git fetch origin pull/63/head' 2024-06-08 00:43:29,543 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-08 00:43:29,543 [ scc.git] DEBUG * branch refs/pull/63/head -> FETCH_HEAD 2024-06-08 00:43:29,549 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-06-08 00:43:29,911 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-08 00:43:29,911 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-06-08 00:43:29,916 [ scc.git] DEBUG ## Unique users: [] 2024-06-08 00:43:29,916 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:43:29,916 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:43:29,922 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-06-08 00:43:29,928 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:43:29,932 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-06-08 00:43:29,942 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-08 00:43:29,945 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-06-08 00:43:29,945 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-06-08 00:43:30,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:43:30,110 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-06-08 00:43:30,117 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:43:30,122 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 63 (Remove python-future dependency) f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-06-08 00:43:30,133 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-06-08 00:43:30,134 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-08 00:43:30,138 [ scc.git] DEBUG setup.py | 3 +-- 2024-06-08 00:43:30,138 [ scc.git] DEBUG src/omero_cli_render.py | 9 ++------- 2024-06-08 00:43:30,138 [ scc.git] DEBUG test/integration/clitest/test_render.py | 6 +----- 2024-06-08 00:43:30,138 [ scc.git] DEBUG 3 files changed, 4 insertions(+), 14 deletions(-) 2024-06-08 00:43:30,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:43:30,519 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dffdfe0e7ed620e791de943fad823e440b40639' 2024-06-08 00:43:30,526 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:43:30,531 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Fix thumbnail generation with missing rendering definition) 6dffdfe0e7ed620e791de943fad823e440b40639' 2024-06-08 00:43:30,543 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-06-08 00:43:30,543 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_render.py 2024-06-08 00:43:30,543 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-08 00:43:30,547 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++++++++-- 2024-06-08 00:43:30,547 [ scc.git] DEBUG test/integration/clitest/test_render.py | 12 ++++++++++++ 2024-06-08 00:43:30,547 [ scc.git] DEBUG 2 files changed, 24 insertions(+), 2 deletions(-) 2024-06-08 00:43:30,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:43:30,922 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-08 00:43:30,963 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:43:30,964 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:43:30,969 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:43:31,020 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-08 00:43:31,027 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f71b82df2e0> has no local changes 2024-06-08 00:43:31,027 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Generated by OMERO-plugins-push#89 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/)' 2024-06-08 00:43:31,036 [ scc.git] DEBUG [detached HEAD 9e487d5] merge master -Dorg -Ssuccess-only 2024-06-08 00:43:31,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:43:31,037 [ scc.repo] DEBUG ## PRs found: 2024-06-08 00:43:31,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-06-08 00:43:31,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/161 HTTP/1.1" 200 None 2024-06-08 00:43:32,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-06-08 00:43:32,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-06-08 00:43:33,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-08 00:43:33,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:43:34,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-08 00:43:34,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-08 00:43:35,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-06-08 00:43:35,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-08 00:43:36,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-06-08 00:43:36,238 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-06-08 00:43:36,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-06-08 00:43:37,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-06-08 00:43:37,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-06-08 00:43:38,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-06-08 00:43:38,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:43:39,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-06-08 00:43:39,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:43:39,662 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-06-08 00:43:40,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-06-08 00:43:40,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-06-08 00:43:41,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-06-08 00:43:41,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-06-08 00:43:42,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:43:42,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-06-08 00:43:42,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:43:42,988 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-06-08 00:43:42,989 [ scc.repo] DEBUG ## Branches found: 2024-06-08 00:43:42,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-08 00:43:42,989 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:43:42,989 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:43:42,996 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-08 00:43:43,001 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-08 00:43:43,002 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-08 00:43:43,008 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-08 00:43:43,026 [ scc.git] DEBUG Already up to date. 2024-06-08 00:43:43,027 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-06-08 00:43:43,402 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-08 00:43:43,403 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-06-08 00:43:43,407 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-06-08 00:43:43,817 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-08 00:43:43,817 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-06-08 00:43:43,822 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-06-08 00:43:44,190 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-08 00:43:44,190 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-06-08 00:43:44,196 [ scc.git] DEBUG ## Unique users: [] 2024-06-08 00:43:44,196 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:43:44,196 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:43:44,202 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-08 00:43:44,210 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:43:44,216 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-08 00:43:44,227 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-06-08 00:43:44,228 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-08 00:43:44,228 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-06-08 00:43:44,228 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-08 00:43:44,228 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-08 00:43:44,233 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-08 00:43:44,243 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-08 00:43:44,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:43:44,421 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-08 00:43:44,429 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-08 00:43:44,434 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#89](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-06-08 00:43:44,440 [ scc.config] DEBUG Found github.token 2024-06-08 00:43:44,440 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-06-08 00:43:44,440 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-08 00:43:44,448 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:43:44,454 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-08 00:43:44,466 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-06-08 00:43:44,467 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-06-08 00:43:44,467 [ scc.git] DEBUG Auto-merging setup.py 2024-06-08 00:43:44,467 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-06-08 00:43:44,467 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-08 00:43:44,467 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-06-08 00:43:44,467 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-06-08 00:43:44,467 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-08 00:43:44,467 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-08 00:43:44,472 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-08 00:43:44,478 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-08 00:43:44,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:43:44,820 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-08 00:43:44,828 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-08 00:43:44,833 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#89](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-06-08 00:43:44,838 [ scc.config] DEBUG Found github.token 2024-06-08 00:43:44,838 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-06-08 00:43:44,838 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-06-08 00:43:44,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:43:44,849 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-06-08 00:43:44,861 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-06-08 00:43:44,861 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-08 00:43:44,861 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-08 00:43:44,864 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-06-08 00:43:44,864 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-06-08 00:43:44,864 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-06-08 00:43:44,864 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-06-08 00:43:44,864 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-06-08 00:43:44,864 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-06-08 00:43:45,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:43:45,264 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-08 00:43:45,306 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:43:45,306 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:43:45,312 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:43:45,355 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-08 00:43:45,362 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f71b7212970> has no local changes 2024-06-08 00:43:45,362 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#89 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/)' 2024-06-08 00:43:45,371 [ scc.git] DEBUG [detached HEAD e72f0fd] merge master -Dorg -Ssuccess-only 2024-06-08 00:43:45,371 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:43:45,372 [ scc.repo] DEBUG ## PRs found: 2024-06-08 00:43:45,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-06-08 00:43:46,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/563 HTTP/1.1" 200 None 2024-06-08 00:43:46,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/563/comments HTTP/1.1" 200 None 2024-06-08 00:43:47,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/acd328badf4723b6ad334eeff22205a726b61043 HTTP/1.1" 200 None 2024-06-08 00:43:47,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/acd328badf4723b6ad334eeff22205a726b61043/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:43:48,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/acd328badf4723b6ad334eeff22205a726b61043/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-08 00:43:48,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/acd328badf4723b6ad334eeff22205a726b61043 HTTP/1.1" 200 None 2024-06-08 00:43:49,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/acd328badf4723b6ad334eeff22205a726b61043?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:43:49,058 [ scc.repo] DEBUG - PR 563 will-moore 'Use path instead of re_path for all URLs' 2024-06-08 00:43:49,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/562 HTTP/1.1" 200 None 2024-06-08 00:43:49,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/562/comments HTTP/1.1" 200 None 2024-06-08 00:43:50,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/5750e2b744e687c5064df1b3ee304bfe7b5e6573 HTTP/1.1" 200 None 2024-06-08 00:43:50,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/5750e2b744e687c5064df1b3ee304bfe7b5e6573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:43:51,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/5750e2b744e687c5064df1b3ee304bfe7b5e6573/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-08 00:43:51,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/5750e2b744e687c5064df1b3ee304bfe7b5e6573 HTTP/1.1" 200 None 2024-06-08 00:43:52,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/5750e2b744e687c5064df1b3ee304bfe7b5e6573?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:43:52,346 [ scc.repo] DEBUG - PR 562 will-moore 'Add changelog 7.0.0' 2024-06-08 00:43:52,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-06-08 00:43:53,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-06-08 00:43:53,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-06-08 00:43:54,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:43:54,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-08 00:43:55,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-06-08 00:43:55,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:43:55,629 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-06-08 00:43:56,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-06-08 00:43:56,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-06-08 00:43:57,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:43:57,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-08 00:43:57,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-06-08 00:43:58,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:43:58,388 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature' 2024-06-08 00:43:58,388 [ scc.repo] DEBUG ## Branches found: 2024-06-08 00:43:58,388 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-08 00:43:58,388 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:43:58,389 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:43:58,397 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-08 00:43:58,404 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-08 00:43:58,404 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-08 00:43:58,414 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-08 00:43:58,432 [ scc.git] DEBUG Already up to date. 2024-06-08 00:43:58,433 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2024-06-08 00:43:58,805 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-08 00:43:58,806 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2024-06-08 00:43:58,812 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-06-08 00:43:59,393 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-08 00:43:59,393 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-06-08 00:43:59,401 [ scc.git] DEBUG Calling 'git fetch origin pull/562/head' 2024-06-08 00:43:59,857 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-08 00:43:59,857 [ scc.git] DEBUG * branch refs/pull/562/head -> FETCH_HEAD 2024-06-08 00:43:59,864 [ scc.git] DEBUG Calling 'git fetch origin pull/563/head' 2024-06-08 00:44:00,335 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-08 00:44:00,335 [ scc.git] DEBUG * branch refs/pull/563/head -> FETCH_HEAD 2024-06-08 00:44:00,340 [ scc.git] DEBUG ## Unique users: [] 2024-06-08 00:44:00,340 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:00,340 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:00,345 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-06-08 00:44:00,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:00,358 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) 6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-06-08 00:44:00,373 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-08 00:44:00,379 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++- 2024-06-08 00:44:00,379 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++ 2024-06-08 00:44:00,379 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++ 2024-06-08 00:44:00,379 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++- 2024-06-08 00:44:00,379 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 + 2024-06-08 00:44:00,382 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++- 2024-06-08 00:44:00,382 [ scc.git] DEBUG src/js/views/right_panel_view.js | 74 +++++++++++++++++++++++++++++- 2024-06-08 00:44:00,382 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++ 2024-06-08 00:44:00,382 [ scc.git] DEBUG src/templates/rois_form.template.html | 7 +++ 2024-06-08 00:44:00,382 [ scc.git] DEBUG 9 files changed, 270 insertions(+), 5 deletions(-) 2024-06-08 00:44:00,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:44:00,551 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-06-08 00:44:00,560 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:00,566 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-06-08 00:44:00,586 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-06-08 00:44:00,587 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-06-08 00:44:00,587 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-06-08 00:44:00,587 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-08 00:44:00,593 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-06-08 00:44:00,594 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-06-08 00:44:00,594 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-06-08 00:44:00,594 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-06-08 00:44:00,594 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-06-08 00:44:00,594 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-06-08 00:44:00,594 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-06-08 00:44:00,595 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-06-08 00:44:00,595 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-06-08 00:44:00,595 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-06-08 00:44:00,595 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-06-08 00:44:00,595 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-06-08 00:44:00,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:44:00,972 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5750e2b744e687c5064df1b3ee304bfe7b5e6573' 2024-06-08 00:44:00,980 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:00,986 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 562 (Add changelog 7.0.0) 5750e2b744e687c5064df1b3ee304bfe7b5e6573' 2024-06-08 00:44:01,027 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-08 00:44:01,030 [ scc.git] DEBUG CHANGELOG.md | 10 ++++++++++ 2024-06-08 00:44:01,030 [ scc.git] DEBUG README.rst | 2 +- 2024-06-08 00:44:01,030 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 1 deletion(-) 2024-06-08 00:44:01,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:44:01,393 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...acd328badf4723b6ad334eeff22205a726b61043' 2024-06-08 00:44:01,401 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:01,407 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 563 (Use path instead of re_path for all URLs) acd328badf4723b6ad334eeff22205a726b61043' 2024-06-08 00:44:01,421 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-08 00:44:01,424 [ scc.git] DEBUG omero_figure/urls.py | 68 +++++++++++++++++++++++++--------------------------- 2024-06-08 00:44:01,424 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 36 deletions(-) 2024-06-08 00:44:01,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:44:01,806 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-08 00:44:01,851 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:01,851 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:01,858 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:44:01,905 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-08 00:44:01,914 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f71b71cdbb0> has no local changes 2024-06-08 00:44:01,914 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 560 will-moore 'Max projection bytes' (exclude comment) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 562 will-moore 'Add changelog 7.0.0' - PR 563 will-moore 'Use path instead of re_path for all URLs' Generated by OMERO-plugins-push#89 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/)' 2024-06-08 00:44:01,925 [ scc.git] DEBUG [detached HEAD f902b896] merge master -Dorg -Ssuccess-only 2024-06-08 00:44:01,926 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:44:01,927 [ scc.repo] DEBUG ## PRs found: 2024-06-08 00:44:02,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-06-08 00:44:02,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-06-08 00:44:03,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-06-08 00:44:03,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-06-08 00:44:04,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:44:04,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-06-08 00:44:05,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:44:05,166 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-06-08 00:44:05,166 [ scc.repo] DEBUG ## Branches found: 2024-06-08 00:44:05,166 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-08 00:44:05,167 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:05,167 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:05,173 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-08 00:44:05,180 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-08 00:44:05,180 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-08 00:44:05,187 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-08 00:44:05,212 [ scc.git] DEBUG Already up to date. 2024-06-08 00:44:05,212 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-06-08 00:44:05,587 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-06-08 00:44:05,587 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-06-08 00:44:05,593 [ scc.git] DEBUG ## Unique users: [] 2024-06-08 00:44:05,593 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:05,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:05,599 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-06-08 00:44:05,604 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:05,608 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-06-08 00:44:05,617 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-06-08 00:44:05,618 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-08 00:44:05,620 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-06-08 00:44:05,620 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-06-08 00:44:05,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:44:05,782 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-08 00:44:05,824 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:05,824 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:05,829 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:44:05,874 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-08 00:44:05,881 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f71b720adf0> has no local changes 2024-06-08 00:44:05,881 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#89 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/)' 2024-06-08 00:44:05,890 [ scc.git] DEBUG [detached HEAD cd86848] merge master -Dorg -Ssuccess-only 2024-06-08 00:44:05,891 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:44:05,891 [ scc.repo] DEBUG ## PRs found: 2024-06-08 00:44:06,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-06-08 00:44:06,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-06-08 00:44:06,739 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-08 00:44:07,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-06-08 00:44:07,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:44:08,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-08 00:44:08,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-06-08 00:44:09,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:44:09,226 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-06-08 00:44:09,227 [ scc.repo] DEBUG ## Branches found: 2024-06-08 00:44:09,227 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-08 00:44:09,227 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:09,227 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:09,234 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-08 00:44:09,238 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-08 00:44:09,238 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-08 00:44:09,243 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-08 00:44:09,256 [ scc.git] DEBUG Already up to date. 2024-06-08 00:44:09,257 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-06-08 00:44:09,652 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-06-08 00:44:09,652 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-06-08 00:44:09,657 [ scc.git] DEBUG ## Unique users: [] 2024-06-08 00:44:09,657 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:09,657 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:09,663 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-06-08 00:44:09,669 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:09,676 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-06-08 00:44:09,688 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-08 00:44:09,694 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-06-08 00:44:09,694 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-06-08 00:44:09,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:44:09,859 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-08 00:44:09,903 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:09,903 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:09,909 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:44:09,961 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-08 00:44:09,973 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f71b720a340> has no local changes 2024-06-08 00:44:09,973 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#89 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/)' 2024-06-08 00:44:09,984 [ scc.git] DEBUG [detached HEAD 798d1b6] merge master -Dorg -Ssuccess-only 2024-06-08 00:44:09,984 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:44:09,985 [ scc.repo] DEBUG ## PRs found: 2024-06-08 00:44:10,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-06-08 00:44:10,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-06-08 00:44:11,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-06-08 00:44:11,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-06-08 00:44:12,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:44:12,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-08 00:44:13,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-06-08 00:44:13,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:44:13,762 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-06-08 00:44:14,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-06-08 00:44:14,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-06-08 00:44:15,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-06-08 00:44:15,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:44:16,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-08 00:44:16,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-06-08 00:44:17,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:44:17,140 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-06-08 00:44:17,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-06-08 00:44:18,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-06-08 00:44:18,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-06-08 00:44:19,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:44:19,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-06-08 00:44:20,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:44:20,091 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-06-08 00:44:20,092 [ scc.repo] DEBUG ## Branches found: 2024-06-08 00:44:20,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-08 00:44:20,092 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:20,092 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:20,099 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-08 00:44:20,105 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-08 00:44:20,105 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-08 00:44:20,112 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-08 00:44:20,128 [ scc.git] DEBUG Already up to date. 2024-06-08 00:44:20,129 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-06-08 00:44:20,490 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-08 00:44:20,490 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-06-08 00:44:20,496 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-06-08 00:44:20,883 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-08 00:44:20,884 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-06-08 00:44:20,892 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-06-08 00:44:21,290 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-08 00:44:21,291 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-06-08 00:44:21,296 [ scc.git] DEBUG ## Unique users: [] 2024-06-08 00:44:21,297 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:21,297 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:21,303 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-06-08 00:44:21,315 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:21,323 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-06-08 00:44:21,341 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-06-08 00:44:21,342 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-08 00:44:21,346 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-06-08 00:44:21,346 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-06-08 00:44:21,346 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-06-08 00:44:21,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:44:21,518 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-06-08 00:44:21,526 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:21,533 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-06-08 00:44:21,571 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-06-08 00:44:21,571 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-06-08 00:44:21,571 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-06-08 00:44:21,571 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-06-08 00:44:21,571 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-08 00:44:21,577 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-06-08 00:44:21,577 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-06-08 00:44:21,577 [ scc.git] DEBUG src/app/header.html | 5 + 2024-06-08 00:44:21,577 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-06-08 00:44:21,577 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-06-08 00:44:21,577 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-06-08 00:44:21,577 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-06-08 00:44:21,577 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-06-08 00:44:21,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:44:21,934 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-06-08 00:44:21,943 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:21,950 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-06-08 00:44:21,966 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-06-08 00:44:21,966 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-08 00:44:21,970 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-06-08 00:44:21,970 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-06-08 00:44:21,970 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-06-08 00:44:22,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:44:22,334 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-08 00:44:22,402 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:22,402 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:22,410 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:44:22,457 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-08 00:44:22,476 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f71b71f98e0> has no local changes 2024-06-08 00:44:22,477 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' Generated by OMERO-plugins-push#89 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/)' 2024-06-08 00:44:22,489 [ scc.git] DEBUG [detached HEAD d0b7c88] merge master -Dorg -Ssuccess-only 2024-06-08 00:44:22,490 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:44:22,490 [ scc.repo] DEBUG ## PRs found: 2024-06-08 00:44:22,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-06-08 00:44:23,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-06-08 00:44:23,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-06-08 00:44:24,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-06-08 00:44:24,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:44:25,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-08 00:44:25,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-06-08 00:44:26,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:44:26,268 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-06-08 00:44:26,268 [ scc.repo] DEBUG ## Branches found: 2024-06-08 00:44:26,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-08 00:44:26,269 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:26,269 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:26,277 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-08 00:44:26,286 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-08 00:44:26,287 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-08 00:44:26,294 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-08 00:44:26,321 [ scc.git] DEBUG Already up to date. 2024-06-08 00:44:26,321 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-06-08 00:44:26,724 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-06-08 00:44:26,725 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-06-08 00:44:26,732 [ scc.git] DEBUG ## Unique users: [] 2024-06-08 00:44:26,733 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:26,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:26,742 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-06-08 00:44:26,754 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:26,764 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-06-08 00:44:26,793 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-08 00:44:26,796 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-06-08 00:44:26,797 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-06-08 00:44:26,797 [ scc.git] DEBUG requirements.txt | 2 +- 2024-06-08 00:44:26,797 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-06-08 00:44:26,797 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-06-08 00:44:26,800 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-06-08 00:44:26,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:44:26,966 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-08 00:44:27,021 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:27,021 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:27,030 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:44:27,077 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-08 00:44:27,088 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f71b4194bb0> has no local changes 2024-06-08 00:44:27,088 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#89 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/)' 2024-06-08 00:44:27,103 [ scc.git] DEBUG [detached HEAD 2ad6a10] merge master -Dorg -Ssuccess-only 2024-06-08 00:44:27,104 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:44:27,104 [ scc.repo] DEBUG ## PRs found: 2024-06-08 00:44:27,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-06-08 00:44:27,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-06-08 00:44:28,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-06-08 00:44:29,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-06-08 00:44:29,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:44:29,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-06-08 00:44:30,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:44:30,402 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-06-08 00:44:30,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-06-08 00:44:31,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-06-08 00:44:31,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-06-08 00:44:32,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:44:32,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-06-08 00:44:33,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:44:33,174 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-06-08 00:44:33,174 [ scc.repo] DEBUG ## Branches found: 2024-06-08 00:44:33,174 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-08 00:44:33,174 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:33,174 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:33,180 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-08 00:44:33,186 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-08 00:44:33,186 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-08 00:44:33,192 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-08 00:44:33,211 [ scc.git] DEBUG Already up to date. 2024-06-08 00:44:33,212 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-06-08 00:44:33,589 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-06-08 00:44:33,589 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-06-08 00:44:33,595 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-06-08 00:44:34,269 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-06-08 00:44:34,269 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-06-08 00:44:34,279 [ scc.git] DEBUG ## Unique users: [] 2024-06-08 00:44:34,279 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:34,279 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:34,291 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-08 00:44:34,305 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:34,316 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-08 00:44:34,348 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-06-08 00:44:34,348 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-06-08 00:44:34,349 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-06-08 00:44:34,349 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-06-08 00:44:34,351 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-08 00:44:34,352 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-08 00:44:34,363 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-08 00:44:34,375 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-08 00:44:34,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:44:34,743 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-08 00:44:34,754 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-08 00:44:34,767 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#89](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-06-08 00:44:34,775 [ scc.config] DEBUG Found github.token 2024-06-08 00:44:34,776 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-06-08 00:44:34,776 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-08 00:44:34,786 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:34,795 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-08 00:44:34,823 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-06-08 00:44:34,823 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-06-08 00:44:34,823 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-06-08 00:44:34,823 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-08 00:44:34,824 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-08 00:44:34,837 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-08 00:44:34,848 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-08 00:44:35,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:44:35,194 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-08 00:44:35,203 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-08 00:44:35,211 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#89](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-06-08 00:44:35,217 [ scc.config] DEBUG Found github.token 2024-06-08 00:44:35,217 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-06-08 00:44:35,218 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-08 00:44:35,274 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:35,274 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:35,283 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:44:35,334 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-08 00:44:35,343 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f71b71d3f40> has no local changes 2024-06-08 00:44:35,343 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#89 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/)' 2024-06-08 00:44:35,353 [ scc.git] DEBUG [detached HEAD 041ebc5] merge master -Dorg -Ssuccess-only 2024-06-08 00:44:35,354 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:44:35,354 [ scc.repo] DEBUG ## PRs found: 2024-06-08 00:44:35,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-06-08 00:44:36,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-06-08 00:44:36,243 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-08 00:44:36,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-06-08 00:44:37,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:44:37,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-08 00:44:38,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-06-08 00:44:38,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:44:38,638 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-06-08 00:44:39,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-06-08 00:44:39,127 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-08 00:44:39,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-06-08 00:44:40,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:44:40,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-08 00:44:41,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-06-08 00:44:41,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:44:41,678 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-06-08 00:44:42,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-06-08 00:44:42,136 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-08 00:44:42,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-06-08 00:44:43,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:44:43,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-08 00:44:44,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-06-08 00:44:44,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:44:44,620 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-06-08 00:44:45,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-06-08 00:44:45,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-06-08 00:44:46,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-06-08 00:44:46,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-06-08 00:44:47,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-06-08 00:44:47,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-06-08 00:44:47,581 [ scc.repo] DEBUG ## Branches found: 2024-06-08 00:44:47,581 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-08 00:44:47,581 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:47,581 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:47,587 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-08 00:44:47,593 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-08 00:44:47,594 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-08 00:44:47,600 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-08 00:44:47,619 [ scc.git] DEBUG Already up to date. 2024-06-08 00:44:47,619 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-06-08 00:44:48,012 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-08 00:44:48,013 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-06-08 00:44:48,018 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-06-08 00:44:48,431 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-08 00:44:48,432 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-06-08 00:44:48,437 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-06-08 00:44:48,842 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-08 00:44:48,842 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-06-08 00:44:48,849 [ scc.git] DEBUG ## Unique users: [] 2024-06-08 00:44:48,849 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:48,849 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:48,855 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-06-08 00:44:48,861 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:48,867 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-06-08 00:44:48,877 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-08 00:44:48,880 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-06-08 00:44:48,880 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-06-08 00:44:49,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:44:49,044 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-06-08 00:44:49,051 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:49,057 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-06-08 00:44:49,104 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-08 00:44:49,104 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-08 00:44:49,108 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-06-08 00:44:49,108 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-06-08 00:44:49,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:44:49,455 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-06-08 00:44:49,461 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:49,467 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-06-08 00:44:49,481 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-08 00:44:49,482 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-08 00:44:49,486 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-06-08 00:44:49,486 [ scc.git] DEBUG package.json | 2 +- 2024-06-08 00:44:49,486 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-06-08 00:44:49,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:44:49,871 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-08 00:44:49,919 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:49,920 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:49,930 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:44:49,978 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-08 00:44:49,985 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f71b414b640> has no local changes 2024-06-08 00:44:49,985 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#89 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/)' 2024-06-08 00:44:49,995 [ scc.git] DEBUG [detached HEAD fee26e2] merge master -Dorg -Ssuccess-only 2024-06-08 00:44:49,996 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:44:49,996 [ scc.repo] DEBUG ## PRs found: 2024-06-08 00:44:50,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-06-08 00:44:50,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-06-08 00:44:51,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-06-08 00:44:51,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:44:52,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-06-08 00:44:52,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:44:52,709 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-06-08 00:44:52,709 [ scc.repo] DEBUG ## Branches found: 2024-06-08 00:44:52,709 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-08 00:44:52,709 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:52,710 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:52,721 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-08 00:44:52,730 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-08 00:44:52,730 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-08 00:44:52,739 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-08 00:44:52,750 [ scc.git] DEBUG Already up to date. 2024-06-08 00:44:52,750 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-06-08 00:44:53,147 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-06-08 00:44:53,147 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-06-08 00:44:53,154 [ scc.git] DEBUG ## Unique users: [] 2024-06-08 00:44:53,154 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:53,155 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:53,162 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-06-08 00:44:53,170 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:53,178 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-06-08 00:44:53,190 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-08 00:44:53,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:44:53,345 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-08 00:44:53,401 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:53,402 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:53,408 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:44:53,455 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-08 00:44:53,462 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f71b71c4be0> has no local changes 2024-06-08 00:44:53,462 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#89 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/)' 2024-06-08 00:44:53,473 [ scc.git] DEBUG [detached HEAD 8f4e20d] merge master -Dorg -Ssuccess-only 2024-06-08 00:44:53,473 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:44:53,474 [ scc.repo] DEBUG ## PRs found: 2024-06-08 00:44:53,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-06-08 00:44:54,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-06-08 00:44:54,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-06-08 00:44:55,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-06-08 00:44:55,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-06-08 00:44:56,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:44:56,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-06-08 00:44:57,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:44:57,231 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-06-08 00:44:57,231 [ scc.repo] DEBUG ## Branches found: 2024-06-08 00:44:57,231 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-08 00:44:57,231 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:57,231 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:57,238 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-08 00:44:57,243 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-08 00:44:57,244 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-08 00:44:57,249 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-08 00:44:57,264 [ scc.git] DEBUG Already up to date. 2024-06-08 00:44:57,264 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-06-08 00:44:57,629 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-06-08 00:44:57,629 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-06-08 00:44:57,634 [ scc.git] DEBUG ## Unique users: [] 2024-06-08 00:44:57,634 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:57,635 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:57,642 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-06-08 00:44:57,649 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:57,654 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-06-08 00:44:57,666 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-06-08 00:44:57,666 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-08 00:44:57,670 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-06-08 00:44:57,670 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-06-08 00:44:57,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:44:57,827 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-08 00:44:57,877 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:44:57,877 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:44:57,883 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:44:57,925 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-08 00:44:57,933 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f71b4104550> has no local changes 2024-06-08 00:44:57,933 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#89 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/)' 2024-06-08 00:44:57,942 [ scc.git] DEBUG [detached HEAD 0cbb1c9] merge master -Dorg -Ssuccess-only 2024-06-08 00:44:57,943 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:44:57,943 [ scc.repo] DEBUG ## PRs found: 2024-06-08 00:44:58,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-06-08 00:44:58,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-06-08 00:44:59,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-06-08 00:44:59,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-06-08 00:45:00,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:45:00,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-06-08 00:45:01,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:45:01,184 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-06-08 00:45:01,184 [ scc.repo] DEBUG ## Branches found: 2024-06-08 00:45:01,184 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-08 00:45:01,184 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:01,184 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:01,192 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-08 00:45:01,198 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-08 00:45:01,198 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-08 00:45:01,204 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-08 00:45:01,221 [ scc.git] DEBUG Already up to date. 2024-06-08 00:45:01,222 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-06-08 00:45:01,621 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-06-08 00:45:01,621 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-06-08 00:45:01,626 [ scc.git] DEBUG ## Unique users: [] 2024-06-08 00:45:01,626 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:01,626 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:01,632 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-08 00:45:01,638 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:01,643 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-08 00:45:01,655 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-06-08 00:45:01,656 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-06-08 00:45:01,656 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-06-08 00:45:01,656 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-06-08 00:45:01,656 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-06-08 00:45:01,656 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-06-08 00:45:01,656 [ scc.git] DEBUG Auto-merging setup.py 2024-06-08 00:45:01,656 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-06-08 00:45:01,656 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-08 00:45:01,656 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-08 00:45:01,662 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-06-08 00:45:01,668 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-06-08 00:45:01,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:01,829 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-08 00:45:01,837 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-06-08 00:45:01,843 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#89](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - omero_signup/signup_settings.py - omero_signup/urls.py - setup.py --conflicts 2024-06-08 00:45:01,847 [ scc.config] DEBUG Found github.token 2024-06-08 00:45:01,848 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-06-08 00:45:01,848 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-08 00:45:01,901 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:01,902 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:01,908 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:45:01,950 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-08 00:45:01,957 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f71b417edf0> has no local changes 2024-06-08 00:45:01,958 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#89 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/)' 2024-06-08 00:45:01,967 [ scc.git] DEBUG [detached HEAD da44625] merge master -Dorg -Ssuccess-only 2024-06-08 00:45:01,968 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:01,968 [ scc.repo] DEBUG ## PRs found: 2024-06-08 00:45:02,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-06-08 00:45:02,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-06-08 00:45:03,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-06-08 00:45:03,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-06-08 00:45:04,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:45:04,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-06-08 00:45:05,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:45:05,151 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-06-08 00:45:05,151 [ scc.repo] DEBUG ## Branches found: 2024-06-08 00:45:05,151 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-08 00:45:05,151 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:05,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:05,157 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-08 00:45:05,161 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-08 00:45:05,162 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-08 00:45:05,167 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-08 00:45:05,182 [ scc.git] DEBUG Already up to date. 2024-06-08 00:45:05,182 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-06-08 00:45:05,550 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-06-08 00:45:05,551 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-06-08 00:45:05,555 [ scc.git] DEBUG ## Unique users: [] 2024-06-08 00:45:05,555 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:05,555 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:05,561 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-06-08 00:45:05,568 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:05,573 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-06-08 00:45:05,585 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-08 00:45:05,588 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-06-08 00:45:05,588 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-06-08 00:45:05,588 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-06-08 00:45:05,588 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-06-08 00:45:05,588 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-06-08 00:45:05,588 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-06-08 00:45:05,588 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-06-08 00:45:05,588 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-06-08 00:45:05,588 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-06-08 00:45:05,588 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-06-08 00:45:05,591 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-06-08 00:45:05,591 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-06-08 00:45:05,591 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-06-08 00:45:05,591 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-06-08 00:45:05,591 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-06-08 00:45:05,591 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-06-08 00:45:05,591 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-06-08 00:45:05,591 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-06-08 00:45:05,591 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-06-08 00:45:05,591 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-06-08 00:45:05,591 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-06-08 00:45:05,591 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-06-08 00:45:05,591 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-06-08 00:45:05,591 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-06-08 00:45:05,591 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-06-08 00:45:05,591 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-06-08 00:45:05,591 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-06-08 00:45:05,591 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-06-08 00:45:05,591 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-06-08 00:45:05,591 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-06-08 00:45:05,591 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-06-08 00:45:05,591 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-06-08 00:45:05,591 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-06-08 00:45:05,591 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-06-08 00:45:05,591 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-06-08 00:45:05,591 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-06-08 00:45:05,592 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-06-08 00:45:05,592 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-06-08 00:45:05,592 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-06-08 00:45:05,592 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-06-08 00:45:05,592 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-06-08 00:45:05,592 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-06-08 00:45:05,592 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-06-08 00:45:05,592 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-06-08 00:45:05,592 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-06-08 00:45:05,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:05,752 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-08 00:45:05,795 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:05,796 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:05,802 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:45:05,842 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-08 00:45:05,850 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f71b4104730> has no local changes 2024-06-08 00:45:05,850 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#89 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/)' 2024-06-08 00:45:05,861 [ scc.git] DEBUG [detached HEAD fe5747b] merge master -Dorg -Ssuccess-only 2024-06-08 00:45:05,861 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:05,861 [ scc.repo] DEBUG ## PRs found: 2024-06-08 00:45:06,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-06-08 00:45:06,191 [ scc.repo] DEBUG ## Branches found: 2024-06-08 00:45:06,191 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-08 00:45:06,191 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:06,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:06,199 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-08 00:45:06,204 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-08 00:45:06,205 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-08 00:45:06,212 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-08 00:45:06,232 [ scc.git] DEBUG Already up to date. 2024-06-08 00:45:06,233 [ scc.git] DEBUG ## Unique users: [] 2024-06-08 00:45:06,233 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:06,233 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:06,241 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-08 00:45:06,283 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:06,283 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:06,290 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:45:06,341 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-08 00:45:06,350 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f71b4116b80> has no local changes 2024-06-08 00:45:06,351 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#89 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/)' 2024-06-08 00:45:06,362 [ scc.git] DEBUG [detached HEAD 8c8b830] merge master -Dorg -Ssuccess-only 2024-06-08 00:45:06,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:06,363 [ scc.repo] DEBUG ## PRs found: 2024-06-08 00:45:06,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-06-08 00:45:06,633 [ scc.repo] DEBUG ## Branches found: 2024-06-08 00:45:06,633 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-08 00:45:06,633 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:06,633 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:06,639 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-08 00:45:06,648 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-08 00:45:06,648 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-08 00:45:06,654 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-08 00:45:06,670 [ scc.git] DEBUG Already up to date. 2024-06-08 00:45:06,670 [ scc.git] DEBUG ## Unique users: [] 2024-06-08 00:45:06,670 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:06,670 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:06,675 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-08 00:45:06,714 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:06,714 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:06,724 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:45:06,774 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-08 00:45:06,783 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f71b4154d90> has no local changes 2024-06-08 00:45:06,783 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#89 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/)' 2024-06-08 00:45:06,793 [ scc.git] DEBUG [detached HEAD 2c6b6fc] merge master -Dorg -Ssuccess-only 2024-06-08 00:45:06,794 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:06,794 [ scc.git] INFO Overriding base-branch from master to main 2024-06-08 00:45:06,794 [ scc.repo] DEBUG ## PRs found: 2024-06-08 00:45:07,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-06-08 00:45:07,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-06-08 00:45:08,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-06-08 00:45:08,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-06-08 00:45:09,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-06-08 00:45:09,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:45:10,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-08 00:45:10,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-06-08 00:45:10,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:45:10,991 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-06-08 00:45:10,991 [ scc.repo] DEBUG ## Branches found: 2024-06-08 00:45:10,991 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-08 00:45:10,991 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:10,991 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:10,997 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-06-08 00:45:11,003 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-08 00:45:11,004 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-06-08 00:45:11,010 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-06-08 00:45:11,029 [ scc.git] DEBUG Already up to date. 2024-06-08 00:45:11,030 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-06-08 00:45:11,440 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-06-08 00:45:11,440 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-06-08 00:45:11,445 [ scc.git] DEBUG ## Unique users: [] 2024-06-08 00:45:11,445 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:11,445 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:11,450 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-08 00:45:11,455 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:11,461 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-08 00:45:11,470 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-06-08 00:45:11,470 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-06-08 00:45:11,470 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-08 00:45:11,471 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-08 00:45:11,477 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-06-08 00:45:11,485 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-06-08 00:45:11,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:11,714 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-08 00:45:11,721 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-06-08 00:45:11,729 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#89](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-06-08 00:45:11,735 [ scc.config] DEBUG Found github.token 2024-06-08 00:45:11,735 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-06-08 00:45:11,735 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-08 00:45:11,782 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:11,782 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:11,789 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:45:11,838 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-08 00:45:11,846 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f71b4155880> has no local changes 2024-06-08 00:45:11,847 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#89 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/)' 2024-06-08 00:45:11,857 [ scc.git] DEBUG [detached HEAD e584521] merge master -Dorg -Ssuccess-only 2024-06-08 00:45:11,858 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:11,858 [ scc.repo] DEBUG ## PRs found: 2024-06-08 00:45:12,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-06-08 00:45:12,145 [ scc.repo] DEBUG ## Branches found: 2024-06-08 00:45:12,145 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-08 00:45:12,145 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:12,145 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:12,151 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-08 00:45:12,156 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-08 00:45:12,156 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-08 00:45:12,161 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-08 00:45:12,177 [ scc.git] DEBUG Already up to date. 2024-06-08 00:45:12,177 [ scc.git] DEBUG ## Unique users: [] 2024-06-08 00:45:12,177 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:12,177 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:12,182 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-08 00:45:12,219 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:12,219 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:12,224 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:45:12,266 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-08 00:45:12,272 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f71b4119e80> has no local changes 2024-06-08 00:45:12,272 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#89 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/)' 2024-06-08 00:45:12,280 [ scc.git] DEBUG [detached HEAD 0deef57] merge master -Dorg -Ssuccess-only 2024-06-08 00:45:12,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:12,281 [ scc.repo] DEBUG ## PRs found: 2024-06-08 00:45:12,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-06-08 00:45:12,578 [ scc.repo] DEBUG ## Branches found: 2024-06-08 00:45:12,578 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-08 00:45:12,578 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:12,578 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:12,584 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-08 00:45:12,589 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-08 00:45:12,589 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-08 00:45:12,595 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-08 00:45:12,609 [ scc.git] DEBUG Already up to date. 2024-06-08 00:45:12,609 [ scc.git] DEBUG ## Unique users: [] 2024-06-08 00:45:12,610 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:12,610 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:12,615 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-08 00:45:12,657 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:12,657 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:12,662 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:45:12,704 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-08 00:45:12,710 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f71b4080400> has no local changes 2024-06-08 00:45:12,711 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#89 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/)' 2024-06-08 00:45:12,719 [ scc.git] DEBUG [detached HEAD dbf517e] merge master -Dorg -Ssuccess-only 2024-06-08 00:45:12,720 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:12,720 [ scc.repo] DEBUG ## PRs found: 2024-06-08 00:45:13,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-06-08 00:45:13,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-06-08 00:45:14,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-06-08 00:45:14,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-06-08 00:45:14,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:45:15,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-06-08 00:45:15,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:45:15,895 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-06-08 00:45:15,895 [ scc.repo] DEBUG ## Branches found: 2024-06-08 00:45:15,895 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-08 00:45:15,895 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:15,895 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:15,901 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-08 00:45:15,906 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-08 00:45:15,906 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-08 00:45:15,911 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-08 00:45:15,929 [ scc.git] DEBUG Already up to date. 2024-06-08 00:45:15,929 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-06-08 00:45:16,329 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-06-08 00:45:16,329 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-06-08 00:45:16,336 [ scc.git] DEBUG ## Unique users: [] 2024-06-08 00:45:16,336 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:16,336 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:16,344 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-08 00:45:16,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:16,369 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-08 00:45:16,389 [ scc.git] DEBUG Auto-merging Dockerfile 2024-06-08 00:45:16,390 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-06-08 00:45:16,390 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-08 00:45:16,392 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-08 00:45:16,405 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-06-08 00:45:16,419 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-06-08 00:45:16,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:16,595 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-08 00:45:16,611 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-06-08 00:45:16,628 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#89](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-06-08 00:45:16,639 [ scc.config] DEBUG Found github.token 2024-06-08 00:45:16,639 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-06-08 00:45:16,640 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-08 00:45:16,707 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:16,708 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:16,717 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:45:16,779 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-08 00:45:16,790 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f71b40c5b80> has no local changes 2024-06-08 00:45:16,790 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#89 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/)' 2024-06-08 00:45:16,804 [ scc.git] DEBUG [detached HEAD c954445] merge master -Dorg -Ssuccess-only 2024-06-08 00:45:16,804 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:16,804 [ scc.git] INFO Overriding base-branch from master to develop 2024-06-08 00:45:16,805 [ scc.repo] DEBUG ## PRs found: 2024-06-08 00:45:17,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-06-08 00:45:17,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-06-08 00:45:18,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-06-08 00:45:18,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-06-08 00:45:19,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-06-08 00:45:19,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-06-08 00:45:20,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-06-08 00:45:20,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-06-08 00:45:20,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-08 00:45:21,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-06-08 00:45:21,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-06-08 00:45:21,812 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-06-08 00:45:22,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-06-08 00:45:22,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-06-08 00:45:23,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-06-08 00:45:23,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-06-08 00:45:23,827 [ scc.repo] DEBUG ## Branches found: 2024-06-08 00:45:23,827 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-08 00:45:23,827 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:23,827 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:23,833 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-06-08 00:45:23,838 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-08 00:45:23,838 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-06-08 00:45:23,844 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-06-08 00:45:23,849 [ scc.git] DEBUG Already up to date. 2024-06-08 00:45:23,850 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-06-08 00:45:24,223 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-06-08 00:45:24,223 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-06-08 00:45:24,228 [ scc.git] DEBUG ## Unique users: [] 2024-06-08 00:45:24,228 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:24,228 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:24,233 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-08 00:45:24,240 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:24,246 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-08 00:45:24,258 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-06-08 00:45:24,258 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-06-08 00:45:24,258 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-08 00:45:24,258 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-08 00:45:24,265 [ scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a' 2024-06-08 00:45:24,271 [ scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-06-08 00:45:24,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:24,431 [ scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-08 00:45:24,439 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a' 2024-06-08 00:45:24,445 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#89](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-06-08 00:45:24,450 [ scc.config] DEBUG Found github.token 2024-06-08 00:45:24,450 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-06-08 00:45:24,451 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-08 00:45:24,492 [ scc.git] DEBUG Get sha1 of %s 2024-06-08 00:45:24,492 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-08 00:45:24,499 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:45:24,544 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-08 00:45:24,551 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f71b40e8d60> has no local changes 2024-06-08 00:45:24,551 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#89 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/)' 2024-06-08 00:45:24,562 [ scc.git] DEBUG [detached HEAD c12a58a] merge master -Dorg -Ssuccess-only 2024-06-08 00:45:24,562 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:24,562 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-08 00:45:24,648 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-06-08 00:45:24,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:24,859 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-06-08 00:45:24,864 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-06-08 00:45:25,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:25,279 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-06-08 00:45:25,286 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-06-08 00:45:25,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:25,690 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-06-08 00:45:25,695 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-06-08 00:45:26,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:26,119 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-06-08 00:45:26,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:26,528 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-06-08 00:45:26,535 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-06-08 00:45:26,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:26,937 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-06-08 00:45:26,943 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-06-08 00:45:27,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:27,350 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-06-08 00:45:27,358 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-06-08 00:45:27,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:27,770 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-06-08 00:45:27,778 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-06-08 00:45:28,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:28,172 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-06-08 00:45:28,178 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-06-08 00:45:28,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:28,595 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-06-08 00:45:28,601 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-06-08 00:45:29,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:29,021 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-06-08 00:45:29,028 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-06-08 00:45:29,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:29,434 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-06-08 00:45:29,448 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-06-08 00:45:29,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:29,884 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-06-08 00:45:30,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:30,287 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-06-08 00:45:30,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:30,685 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-06-08 00:45:30,692 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-06-08 00:45:31,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:31,117 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-06-08 00:45:31,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:31,518 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-06-08 00:45:31,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:31,923 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-06-08 00:45:31,930 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-06-08 00:45:32,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:32,327 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-06-08 00:45:32,333 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-06-08 00:45:32,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:32,736 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-06-08 00:45:32,742 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-06-08 00:45:33,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:33,160 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-06-08 00:45:33,165 [ scc.config] DEBUG Found submodule.scripts.url 2024-06-08 00:45:33,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-08 00:45:33,581 [ scc.config] DEBUG Found submodule.scripts.branch 2024-06-08 00:45:33,581 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-08 00:45:33,668 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f71b82e9c40> has local changes 2024-06-08 00:45:33,668 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 560 will-moore 'Max projection bytes' (exclude comment) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 562 will-moore 'Add changelog 7.0.0' - PR 563 will-moore 'Use path instead of re_path for all URLs' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#89 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/89/)' 2024-06-08 00:45:33,684 [ scc.git] DEBUG [detached HEAD bdbb744] merge master -Dorg -Ssuccess-only 2024-06-08 00:45:33,684 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-06-08 00:45:33,684 [ scc.merge] INFO Repository: ome/omero-plugins 2024-06-08 00:45:33,684 [ scc.merge] INFO Already up to date. 2024-06-08 00:45:33,684 [ scc.merge] INFO 2024-06-08 00:45:33,684 [ scc.merge] INFO Merged PRs: 2024-06-08 00:45:33,684 [ scc.merge] INFO - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' 2024-06-08 00:45:33,684 [ scc.merge] INFO 2024-06-08 00:45:33,684 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-06-08 00:45:33,684 [ scc.merge] INFO Already up to date. 2024-06-08 00:45:33,684 [ scc.merge] INFO 2024-06-08 00:45:33,684 [ scc.merge] INFO 2024-06-08 00:45:33,684 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-06-08 00:45:33,684 [ scc.merge] INFO Excluded PRs: 2024-06-08 00:45:33,684 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-06-08 00:45:33,684 [ scc.merge] INFO Already up to date. 2024-06-08 00:45:33,684 [ scc.merge] INFO 2024-06-08 00:45:33,685 [ scc.merge] INFO Merged PRs: 2024-06-08 00:45:33,685 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-06-08 00:45:33,685 [ scc.merge] INFO 2024-06-08 00:45:33,685 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-06-08 00:45:33,685 [ scc.merge] INFO Excluded PRs: 2024-06-08 00:45:33,685 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-06-08 00:45:33,685 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-06-08 00:45:33,685 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-06-08 00:45:33,685 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-06-08 00:45:33,685 [ scc.merge] INFO Already up to date. 2024-06-08 00:45:33,685 [ scc.merge] INFO 2024-06-08 00:45:33,685 [ scc.merge] INFO Merged PRs: 2024-06-08 00:45:33,685 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-06-08 00:45:33,685 [ scc.merge] INFO - PR 63 sbesson 'Remove python-future dependency' 2024-06-08 00:45:33,685 [ scc.merge] INFO - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-06-08 00:45:33,685 [ scc.merge] INFO 2024-06-08 00:45:33,685 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-06-08 00:45:33,685 [ scc.merge] INFO Excluded PRs: 2024-06-08 00:45:33,685 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-06-08 00:45:33,685 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-06-08 00:45:33,685 [ scc.merge] INFO Already up to date. 2024-06-08 00:45:33,685 [ scc.merge] INFO 2024-06-08 00:45:33,685 [ scc.merge] INFO Merged PRs: 2024-06-08 00:45:33,685 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-06-08 00:45:33,685 [ scc.merge] INFO 2024-06-08 00:45:33,685 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-08 00:45:33,685 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-06-08 00:45:33,685 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-06-08 00:45:33,685 [ scc.merge] INFO 2024-06-08 00:45:33,685 [ scc.merge] INFO Repository: ome/omero-figure 2024-06-08 00:45:33,685 [ scc.merge] INFO Excluded PRs: 2024-06-08 00:45:33,685 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' (exclude comment) 2024-06-08 00:45:33,685 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-06-08 00:45:33,685 [ scc.merge] INFO Already up to date. 2024-06-08 00:45:33,685 [ scc.merge] INFO 2024-06-08 00:45:33,686 [ scc.merge] INFO Merged PRs: 2024-06-08 00:45:33,686 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' 2024-06-08 00:45:33,686 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-06-08 00:45:33,686 [ scc.merge] INFO - PR 562 will-moore 'Add changelog 7.0.0' 2024-06-08 00:45:33,686 [ scc.merge] INFO - PR 563 will-moore 'Use path instead of re_path for all URLs' 2024-06-08 00:45:33,686 [ scc.merge] INFO 2024-06-08 00:45:33,686 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-06-08 00:45:33,686 [ scc.merge] INFO Already up to date. 2024-06-08 00:45:33,686 [ scc.merge] INFO 2024-06-08 00:45:33,686 [ scc.merge] INFO Merged PRs: 2024-06-08 00:45:33,686 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-06-08 00:45:33,686 [ scc.merge] INFO 2024-06-08 00:45:33,686 [ scc.merge] INFO Repository: ome/omero-gallery 2024-06-08 00:45:33,686 [ scc.merge] INFO Already up to date. 2024-06-08 00:45:33,686 [ scc.merge] INFO 2024-06-08 00:45:33,686 [ scc.merge] INFO Merged PRs: 2024-06-08 00:45:33,686 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-06-08 00:45:33,686 [ scc.merge] INFO 2024-06-08 00:45:33,686 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-06-08 00:45:33,686 [ scc.merge] INFO Excluded PRs: 2024-06-08 00:45:33,686 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-06-08 00:45:33,686 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-06-08 00:45:33,686 [ scc.merge] INFO Already up to date. 2024-06-08 00:45:33,686 [ scc.merge] INFO 2024-06-08 00:45:33,686 [ scc.merge] INFO Merged PRs: 2024-06-08 00:45:33,686 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-06-08 00:45:33,686 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-06-08 00:45:33,686 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-06-08 00:45:33,686 [ scc.merge] INFO 2024-06-08 00:45:33,686 [ scc.merge] INFO Repository: ome/omero-mapr 2024-06-08 00:45:33,686 [ scc.merge] INFO Excluded PRs: 2024-06-08 00:45:33,686 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-06-08 00:45:33,686 [ scc.merge] INFO Already up to date. 2024-06-08 00:45:33,686 [ scc.merge] INFO 2024-06-08 00:45:33,686 [ scc.merge] INFO Merged PRs: 2024-06-08 00:45:33,686 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-06-08 00:45:33,687 [ scc.merge] INFO 2024-06-08 00:45:33,687 [ scc.merge] INFO Repository: ome/omero-metadata 2024-06-08 00:45:33,687 [ scc.merge] INFO Already up to date. 2024-06-08 00:45:33,687 [ scc.merge] INFO 2024-06-08 00:45:33,687 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-08 00:45:33,687 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-06-08 00:45:33,687 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-06-08 00:45:33,687 [ scc.merge] INFO 2024-06-08 00:45:33,687 [ scc.merge] INFO Repository: ome/omero-parade 2024-06-08 00:45:33,687 [ scc.merge] INFO Excluded PRs: 2024-06-08 00:45:33,687 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-06-08 00:45:33,687 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-06-08 00:45:33,687 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-06-08 00:45:33,687 [ scc.merge] INFO Already up to date. 2024-06-08 00:45:33,687 [ scc.merge] INFO 2024-06-08 00:45:33,687 [ scc.merge] INFO Merged PRs: 2024-06-08 00:45:33,687 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-06-08 00:45:33,687 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-06-08 00:45:33,687 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-06-08 00:45:33,687 [ scc.merge] INFO 2024-06-08 00:45:33,687 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-06-08 00:45:33,687 [ scc.merge] INFO Already up to date. 2024-06-08 00:45:33,687 [ scc.merge] INFO 2024-06-08 00:45:33,687 [ scc.merge] INFO Merged PRs: 2024-06-08 00:45:33,687 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-06-08 00:45:33,687 [ scc.merge] INFO 2024-06-08 00:45:33,687 [ scc.merge] INFO Repository: ome/omero-rois 2024-06-08 00:45:33,687 [ scc.merge] INFO Excluded PRs: 2024-06-08 00:45:33,687 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-06-08 00:45:33,687 [ scc.merge] INFO Already up to date. 2024-06-08 00:45:33,687 [ scc.merge] INFO 2024-06-08 00:45:33,687 [ scc.merge] INFO Merged PRs: 2024-06-08 00:45:33,687 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-06-08 00:45:33,687 [ scc.merge] INFO 2024-06-08 00:45:33,687 [ scc.merge] INFO Repository: ome/omero-signup 2024-06-08 00:45:33,688 [ scc.merge] INFO Already up to date. 2024-06-08 00:45:33,688 [ scc.merge] INFO 2024-06-08 00:45:33,688 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-08 00:45:33,688 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-06-08 00:45:33,688 [ scc.merge] INFO 2024-06-08 00:45:33,688 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-06-08 00:45:33,688 [ scc.merge] INFO Already up to date. 2024-06-08 00:45:33,688 [ scc.merge] INFO 2024-06-08 00:45:33,688 [ scc.merge] INFO Merged PRs: 2024-06-08 00:45:33,688 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-06-08 00:45:33,688 [ scc.merge] INFO 2024-06-08 00:45:33,688 [ scc.merge] INFO Repository: ome/omero-upload 2024-06-08 00:45:33,688 [ scc.merge] INFO Already up to date. 2024-06-08 00:45:33,688 [ scc.merge] INFO 2024-06-08 00:45:33,688 [ scc.merge] INFO 2024-06-08 00:45:33,688 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-06-08 00:45:33,688 [ scc.merge] INFO Already up to date. 2024-06-08 00:45:33,688 [ scc.merge] INFO 2024-06-08 00:45:33,688 [ scc.merge] INFO 2024-06-08 00:45:33,688 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-06-08 00:45:33,688 [ scc.merge] INFO Excluded PRs: 2024-06-08 00:45:33,688 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-06-08 00:45:33,688 [ scc.merge] INFO Already up to date. 2024-06-08 00:45:33,688 [ scc.merge] INFO 2024-06-08 00:45:33,688 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-08 00:45:33,688 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-06-08 00:45:33,688 [ scc.merge] INFO 2024-06-08 00:45:33,688 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-06-08 00:45:33,688 [ scc.merge] INFO Already up to date. 2024-06-08 00:45:33,688 [ scc.merge] INFO 2024-06-08 00:45:33,688 [ scc.merge] INFO 2024-06-08 00:45:33,688 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-06-08 00:45:33,688 [ scc.merge] INFO Already up to date. 2024-06-08 00:45:33,689 [ scc.merge] INFO 2024-06-08 00:45:33,689 [ scc.merge] INFO 2024-06-08 00:45:33,689 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-06-08 00:45:33,689 [ scc.merge] INFO Already up to date. 2024-06-08 00:45:33,689 [ scc.merge] INFO 2024-06-08 00:45:33,689 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-08 00:45:33,689 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-06-08 00:45:33,689 [ scc.merge] INFO 2024-06-08 00:45:33,689 [ scc.merge] INFO Repository: ome/scripts 2024-06-08 00:45:33,689 [ scc.merge] INFO Excluded PRs: 2024-06-08 00:45:33,689 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-06-08 00:45:33,689 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-06-08 00:45:33,689 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-06-08 00:45:33,689 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-06-08 00:45:33,689 [ scc.merge] INFO Already up to date. 2024-06-08 00:45:33,689 [ scc.merge] INFO 2024-06-08 00:45:33,689 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-08 00:45:33,689 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-06-08 00:45:33,689 [ scc.merge] INFO 2024-06-08 00:45:33,689 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-06-08 00:45:33,689 [ scc.git] DEBUG Calling 'git remote' 2024-06-08 00:45:33,695 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-08 00:45:33,695 [ scc.git] DEBUG Calling 'git remote' 2024-06-08 00:45:33,700 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:33,700 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-08 00:45:33,700 [ scc.git] DEBUG Calling 'git remote' 2024-06-08 00:45:33,705 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:33,706 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-08 00:45:33,706 [ scc.git] DEBUG Calling 'git remote' 2024-06-08 00:45:33,711 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:33,711 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-08 00:45:33,712 [ scc.git] DEBUG Calling 'git remote' 2024-06-08 00:45:33,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:33,718 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-08 00:45:33,718 [ scc.git] DEBUG Calling 'git remote' 2024-06-08 00:45:33,723 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:33,724 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-08 00:45:33,724 [ scc.git] DEBUG Calling 'git remote' 2024-06-08 00:45:33,729 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:33,730 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-08 00:45:33,730 [ scc.git] DEBUG Calling 'git remote' 2024-06-08 00:45:33,735 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:33,735 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-08 00:45:33,736 [ scc.git] DEBUG Calling 'git remote' 2024-06-08 00:45:33,742 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:33,742 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-08 00:45:33,742 [ scc.git] DEBUG Calling 'git remote' 2024-06-08 00:45:33,748 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:33,748 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-08 00:45:33,748 [ scc.git] DEBUG Calling 'git remote' 2024-06-08 00:45:33,755 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:33,755 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-08 00:45:33,755 [ scc.git] DEBUG Calling 'git remote' 2024-06-08 00:45:33,761 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:33,761 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-08 00:45:33,761 [ scc.git] DEBUG Calling 'git remote' 2024-06-08 00:45:33,767 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:33,767 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-08 00:45:33,767 [ scc.git] DEBUG Calling 'git remote' 2024-06-08 00:45:33,773 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:33,773 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-08 00:45:33,773 [ scc.git] DEBUG Calling 'git remote' 2024-06-08 00:45:33,778 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:33,779 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-08 00:45:33,779 [ scc.git] DEBUG Calling 'git remote' 2024-06-08 00:45:33,784 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:33,784 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-08 00:45:33,784 [ scc.git] DEBUG Calling 'git remote' 2024-06-08 00:45:33,790 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:33,790 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-08 00:45:33,790 [ scc.git] DEBUG Calling 'git remote' 2024-06-08 00:45:33,796 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:33,796 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-08 00:45:33,796 [ scc.git] DEBUG Calling 'git remote' 2024-06-08 00:45:33,803 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:33,803 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-08 00:45:33,803 [ scc.git] DEBUG Calling 'git remote' 2024-06-08 00:45:33,809 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:33,810 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-08 00:45:33,810 [ scc.git] DEBUG Calling 'git remote' 2024-06-08 00:45:33,816 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:33,816 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-08 00:45:33,816 [ scc.git] DEBUG Calling 'git remote' 2024-06-08 00:45:33,822 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-08 00:45:33,822 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-08 00:45:33,822 [ scc.git] DEBUG Calling 'git remote' 2024-06-08 00:45:33,828 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD b85c15a] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 2ca566b Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 3d9e3b87 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7b7a637 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 5a90893 nothing to commit, working tree clean [detached HEAD a224e07] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-08 00:46:21,909 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-08 00:46:30,939 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-08 00:46:33,262 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-08 00:46:37,853 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-08 00:47:24,836 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS