![[Jenkins]](/jenkins/static/28c89a1b/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 98 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 17debd0389692e2455795d3c9d15b57151d5d590 (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 17debd0389692e2455795d3c9d15b57151d5d590 # timeout=10 Commit message: "Merge pull request #372 from ome/dependabot/submodules/omero-test-infra-7688c54" > git rev-list --no-walk 17debd0389692e2455795d3c9d15b57151d5d590 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 87 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.6.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.6.2-py3-none-any.whl (164 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl (3.9 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.6.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.8 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-06-09 00:42:02,627 [ scc.config] DEBUG Found github.token 2024-06-09 00:42:02,630 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-06-09 00:42:02,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:42:03,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:42:03,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-06-09 00:42:03,637 [ scc.gh] DEBUG 4014 remaining from 5000 (Reset at 00:06 2024-06-09 00:42:03,640 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-09 00:42:03,644 [ scc.git] DEBUG Check current status 2024-06-09 00:42:03,644 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:42:03,649 [ scc.git] DEBUG 17debd0 Merge pull request #372 from ome/dependabot/submodules/omero-test-infra-7688c54 2024-06-09 00:42:03,649 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:42:03,697 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-09 00:42:03,700 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-09 00:42:03,703 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-09 00:42:03,706 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-09 00:42:04,017 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-06-09 00:42:04,020 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-09 00:42:04,022 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-09 00:42:04,025 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-06-09 00:42:04,028 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-09 00:42:04,031 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-09 00:42:04,034 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-09 00:42:04,036 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-09 00:42:04,039 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-09 00:42:04,042 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-09 00:42:04,063 [ scc.git] DEBUG 7688c540375cf05252c31f216e0248b69a2659c2 omero-test-infra (v0.6.3-57-g7688c54) 2024-06-09 00:42:04,066 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-09 00:42:04,069 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-09 00:42:04,071 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-09 00:42:04,074 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-09 00:42:04,076 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-09 00:42:04,079 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-09 00:42:04,082 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-09 00:42:04,087 [ scc.config] DEBUG Found remote.origin.url 2024-06-09 00:42:04,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-06-09 00:42:04,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-09 00:42:05,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-09 00:42:05,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-09 00:42:06,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-09 00:42:06,082 [ scc.git] DEBUG Resetting... 2024-06-09 00:42:06,082 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-06-09 00:42:06,093 [ scc.git] DEBUG HEAD is now at 17debd0 Merge pull request #372 from ome/dependabot/submodules/omero-test-infra-7688c54 2024-06-09 00:42:06,093 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-06-09 00:42:06,194 [ scc.git] DEBUG Check current status 2024-06-09 00:42:06,194 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:42:06,200 [ scc.git] DEBUG 17debd0 Merge pull request #372 from ome/dependabot/submodules/omero-test-infra-7688c54 2024-06-09 00:42:06,200 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:42:06,247 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-09 00:42:06,250 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-09 00:42:06,253 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-09 00:42:06,256 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-09 00:42:06,263 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-06-09 00:42:06,266 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-09 00:42:06,270 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-09 00:42:06,273 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-06-09 00:42:06,276 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-09 00:42:06,279 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-09 00:42:06,282 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-09 00:42:06,285 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-09 00:42:06,288 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-09 00:42:06,291 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-09 00:42:06,295 [ scc.git] DEBUG 7688c540375cf05252c31f216e0248b69a2659c2 omero-test-infra (v0.6.3-57-g7688c54) 2024-06-09 00:42:06,298 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-09 00:42:06,301 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-09 00:42:06,304 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-09 00:42:06,306 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-09 00:42:06,309 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-09 00:42:06,313 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-09 00:42:06,316 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-09 00:42:06,317 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-06-09 00:42:06,318 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-06-09 00:42:06,318 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-06-09 00:42:06,318 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-06-09 00:42:06,318 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-06-09 00:42:06,318 [ scc.repo] DEBUG ## PRs found: 2024-06-09 00:42:06,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-06-09 00:42:07,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/373 HTTP/1.1" 200 None 2024-06-09 00:42:07,076 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-09 00:42:07,076 [ scc.repo] DEBUG - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' 2024-06-09 00:42:07,076 [ scc.repo] DEBUG ## Branches found: 2024-06-09 00:42:07,076 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:42:07,076 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:42:07,081 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-09 00:42:07,085 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-09 00:42:07,085 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-09 00:42:07,089 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-09 00:42:07,094 [ scc.git] DEBUG Already up to date. 2024-06-09 00:42:07,095 [ scc.git] DEBUG Calling 'git fetch origin pull/373/head' 2024-06-09 00:42:07,457 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-06-09 00:42:07,457 [ scc.git] DEBUG * branch refs/pull/373/head -> FETCH_HEAD 2024-06-09 00:42:07,463 [ scc.git] DEBUG ## Unique users: [] 2024-06-09 00:42:07,463 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:42:07,463 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:42:07,467 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c8279eaae4892995e532fa290a1f76ace85afdbc' 2024-06-09 00:42:07,483 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:42:07,487 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 373 (Bump omero-test-infra from `7688c54` to `cda3ec6`) c8279eaae4892995e532fa290a1f76ace85afdbc' 2024-06-09 00:42:07,503 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-09 00:42:07,505 [ scc.git] DEBUG omero-test-infra | 2 +- 2024-06-09 00:42:07,505 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-06-09 00:42:07,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:42:07,658 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-09 00:42:07,770 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2024-06-09 00:42:07,771 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:42:07,771 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:42:07,775 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-09 00:42:08,568 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7285cdd2e0> has no local changes 2024-06-09 00:42:08,568 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' Generated by OMERO-plugins-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/)' 2024-06-09 00:42:08,643 [ scc.git] DEBUG [detached HEAD a906255] merge master -Dorg -Snone 2024-06-09 00:42:08,643 [ scc.merge] INFO Repository: ome/omero-plugins 2024-06-09 00:42:08,643 [ scc.merge] INFO Already up to date. 2024-06-09 00:42:08,643 [ scc.merge] INFO 2024-06-09 00:42:08,643 [ scc.merge] INFO Merged PRs: 2024-06-09 00:42:08,643 [ scc.merge] INFO - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' 2024-06-09 00:42:08,643 [ scc.merge] INFO 2024-06-09 00:42:08,643 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-06-09 00:42:08,643 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-06-09 00:42:17,745 [ scc.config] DEBUG Found github.token 2024-06-09 00:42:17,748 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-06-09 00:42:17,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:42:18,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:42:18,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-06-09 00:42:18,739 [ scc.gh] DEBUG 3978 remaining from 5000 (Reset at 00:06 2024-06-09 00:42:18,739 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-09 00:42:18,743 [ scc.git] DEBUG Check current status 2024-06-09 00:42:18,743 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:42:18,746 [ scc.git] DEBUG a906255 merge master -Dorg -Snone 2024-06-09 00:42:18,746 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:42:18,793 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-09 00:42:18,796 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-09 00:42:18,798 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-09 00:42:18,801 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-09 00:42:18,808 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-06-09 00:42:18,810 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-09 00:42:18,813 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-09 00:42:18,816 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-06-09 00:42:18,819 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-09 00:42:18,822 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-09 00:42:18,825 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-09 00:42:18,827 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-09 00:42:18,830 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-09 00:42:18,833 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-09 00:42:18,836 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-09 00:42:18,839 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-09 00:42:18,841 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-09 00:42:18,843 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-09 00:42:18,846 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-09 00:42:18,848 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-09 00:42:18,851 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-09 00:42:18,854 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-09 00:42:18,858 [ scc.config] DEBUG Found remote.origin.url 2024-06-09 00:42:18,858 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-06-09 00:42:18,861 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-06-09 00:42:19,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-06-09 00:42:19,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-09 00:42:20,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-09 00:42:20,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-09 00:42:20,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-09 00:42:20,930 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:42:20,998 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-09 00:42:20,998 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-09 00:42:21,001 [ scc.git] DEBUG Check current status 2024-06-09 00:42:21,002 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:42:21,005 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-06-09 00:42:21,005 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:42:21,044 [ scc.config] DEBUG Found remote.origin.url 2024-06-09 00:42:21,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-06-09 00:42:21,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-09 00:42:22,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-09 00:42:22,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-09 00:42:23,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-09 00:42:23,135 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:42:23,174 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:42:23,174 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-09 00:42:23,174 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-09 00:42:23,178 [ scc.git] DEBUG Check current status 2024-06-09 00:42:23,178 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:42:23,181 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-06-09 00:42:23,181 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:42:23,220 [ scc.config] DEBUG Found remote.origin.url 2024-06-09 00:42:23,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-06-09 00:42:24,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-09 00:42:24,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-09 00:42:24,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-09 00:42:25,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-09 00:42:25,358 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:42:25,397 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:42:25,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-09 00:42:25,398 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-09 00:42:25,402 [ scc.git] DEBUG Check current status 2024-06-09 00:42:25,402 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:42:25,406 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-06-09 00:42:25,406 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:42:25,447 [ scc.config] DEBUG Found remote.origin.url 2024-06-09 00:42:25,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-06-09 00:42:26,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-09 00:42:26,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-09 00:42:27,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-09 00:42:27,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-09 00:42:27,631 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:42:27,669 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:42:27,670 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-09 00:42:27,670 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-09 00:42:27,674 [ scc.git] DEBUG Check current status 2024-06-09 00:42:27,674 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:42:27,678 [ scc.git] DEBUG 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-09 00:42:27,678 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:42:27,720 [ scc.config] DEBUG Found remote.origin.url 2024-06-09 00:42:28,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-06-09 00:42:28,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-09 00:42:29,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-09 00:42:29,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-09 00:42:30,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-09 00:42:30,020 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:42:30,060 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:42:30,062 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-09 00:42:30,062 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-09 00:42:30,067 [ scc.git] DEBUG Check current status 2024-06-09 00:42:30,067 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:42:30,085 [ scc.git] DEBUG 3d9e3b87 Merge pull request #554 from jburel/update_publish 2024-06-09 00:42:30,085 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:42:30,129 [ scc.config] DEBUG Found remote.origin.url 2024-06-09 00:42:30,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-06-09 00:42:30,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-09 00:42:31,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-09 00:42:31,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-09 00:42:32,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-09 00:42:32,235 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:42:32,274 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:42:32,275 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-09 00:42:32,275 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-09 00:42:32,279 [ scc.git] DEBUG Check current status 2024-06-09 00:42:32,279 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:42:32,283 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-06-09 00:42:32,283 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:42:32,323 [ scc.config] DEBUG Found remote.origin.url 2024-06-09 00:42:32,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-06-09 00:42:33,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-09 00:42:33,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-09 00:42:34,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-09 00:42:34,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-09 00:42:34,468 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:42:34,507 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:42:34,508 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-09 00:42:34,508 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-09 00:42:34,512 [ scc.git] DEBUG Check current status 2024-06-09 00:42:34,512 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:42:34,516 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-06-09 00:42:34,516 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:42:34,561 [ scc.config] DEBUG Found remote.origin.url 2024-06-09 00:42:34,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-06-09 00:42:35,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-09 00:42:35,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-09 00:42:36,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-09 00:42:36,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-09 00:42:36,674 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:42:36,719 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:42:36,720 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-09 00:42:36,720 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-09 00:42:36,725 [ scc.git] DEBUG Check current status 2024-06-09 00:42:36,725 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:42:36,730 [ scc.git] DEBUG 7b7a637 add dev to version 2024-06-09 00:42:36,730 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:42:36,774 [ scc.config] DEBUG Found remote.origin.url 2024-06-09 00:42:37,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-06-09 00:42:37,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-09 00:42:38,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-09 00:42:38,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-09 00:42:38,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-09 00:42:38,882 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:42:38,921 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:42:38,922 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-09 00:42:38,922 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-09 00:42:38,927 [ scc.git] DEBUG Check current status 2024-06-09 00:42:38,927 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:42:38,932 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-06-09 00:42:38,932 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:42:38,978 [ scc.config] DEBUG Found remote.origin.url 2024-06-09 00:42:39,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-06-09 00:42:39,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-09 00:42:40,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-09 00:42:40,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-09 00:42:41,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-09 00:42:41,032 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:42:41,072 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:42:41,073 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-09 00:42:41,073 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-09 00:42:41,077 [ scc.git] DEBUG Check current status 2024-06-09 00:42:41,078 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:42:41,081 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-09 00:42:41,082 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:42:41,121 [ scc.config] DEBUG Found remote.origin.url 2024-06-09 00:42:41,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-06-09 00:42:41,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-09 00:42:42,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-09 00:42:42,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-09 00:42:43,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-09 00:42:43,236 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:42:43,273 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:42:43,274 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-09 00:42:43,274 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-09 00:42:43,278 [ scc.git] DEBUG Check current status 2024-06-09 00:42:43,278 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:42:43,282 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-06-09 00:42:43,282 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:42:43,325 [ scc.config] DEBUG Found remote.origin.url 2024-06-09 00:42:43,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-06-09 00:42:44,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-09 00:42:44,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-09 00:42:45,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-09 00:42:45,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-09 00:42:45,444 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:42:45,485 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:42:45,486 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-09 00:42:45,486 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-09 00:42:45,491 [ scc.git] DEBUG Check current status 2024-06-09 00:42:45,491 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:42:45,495 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-06-09 00:42:45,495 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:42:45,540 [ scc.config] DEBUG Found remote.origin.url 2024-06-09 00:42:45,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-06-09 00:42:46,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-09 00:42:46,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-09 00:42:47,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-09 00:42:47,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-09 00:42:47,730 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:42:47,771 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:42:47,772 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-09 00:42:47,773 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-09 00:42:47,778 [ scc.git] DEBUG Check current status 2024-06-09 00:42:47,778 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:42:47,783 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-06-09 00:42:47,783 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:42:47,829 [ scc.config] DEBUG Found remote.origin.url 2024-06-09 00:42:48,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-06-09 00:42:48,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-09 00:42:49,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-09 00:42:49,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-09 00:42:49,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-09 00:42:49,937 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:42:49,976 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:42:49,977 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-09 00:42:49,977 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-09 00:42:49,982 [ scc.git] DEBUG Check current status 2024-06-09 00:42:49,982 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:42:49,986 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-06-09 00:42:49,986 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:42:50,030 [ scc.config] DEBUG Found remote.origin.url 2024-06-09 00:42:50,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-06-09 00:42:50,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-09 00:42:51,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-09 00:42:51,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-09 00:42:52,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-09 00:42:52,181 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:42:52,221 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:42:52,222 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-09 00:42:52,223 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-09 00:42:52,227 [ scc.git] DEBUG Check current status 2024-06-09 00:42:52,227 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:42:52,231 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-06-09 00:42:52,232 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:42:52,292 [ scc.config] DEBUG Found remote.origin.url 2024-06-09 00:42:52,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-09 00:42:52,612 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-09 00:42:52,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-06-09 00:42:53,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-09 00:42:53,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-09 00:42:54,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-09 00:42:54,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-09 00:42:54,616 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:42:54,659 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:42:54,660 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-09 00:42:54,660 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-09 00:42:54,665 [ scc.git] DEBUG Check current status 2024-06-09 00:42:54,665 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:42:54,669 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-06-09 00:42:54,669 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:42:54,712 [ scc.config] DEBUG Found remote.origin.url 2024-06-09 00:42:55,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-06-09 00:42:55,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-09 00:42:56,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-09 00:42:56,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-09 00:42:56,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-09 00:42:56,911 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:42:56,953 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:42:56,954 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-09 00:42:56,954 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-09 00:42:56,959 [ scc.git] DEBUG Check current status 2024-06-09 00:42:56,959 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:42:56,964 [ scc.git] DEBUG deab817 update setup-python to v4 2024-06-09 00:42:56,964 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:42:57,009 [ scc.config] DEBUG Found remote.origin.url 2024-06-09 00:42:57,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-06-09 00:42:57,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-09 00:42:58,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-09 00:42:58,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-09 00:42:59,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-09 00:42:59,063 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:42:59,103 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:42:59,104 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-09 00:42:59,104 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-09 00:42:59,110 [ scc.git] DEBUG Check current status 2024-06-09 00:42:59,110 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:42:59,115 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-06-09 00:42:59,115 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:42:59,163 [ scc.config] DEBUG Found remote.origin.url 2024-06-09 00:42:59,164 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-06-09 00:42:59,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-06-09 00:43:00,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-09 00:43:00,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-09 00:43:00,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-09 00:43:01,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-09 00:43:01,313 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:43:01,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:43:01,364 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-09 00:43:01,364 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-09 00:43:01,371 [ scc.git] DEBUG Check current status 2024-06-09 00:43:01,371 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:43:01,377 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-06-09 00:43:01,377 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:43:01,430 [ scc.config] DEBUG Found remote.origin.url 2024-06-09 00:43:01,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-09 00:43:01,747 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-09 00:43:01,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-06-09 00:43:02,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-09 00:43:02,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-09 00:43:03,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-09 00:43:03,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-09 00:43:03,698 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:43:03,740 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:43:03,741 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-09 00:43:03,741 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-09 00:43:03,746 [ scc.git] DEBUG Check current status 2024-06-09 00:43:03,746 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:43:03,751 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-06-09 00:43:03,751 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:43:03,794 [ scc.config] DEBUG Found remote.origin.url 2024-06-09 00:43:04,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-09 00:43:04,127 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-09 00:43:04,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-06-09 00:43:04,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-09 00:43:05,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-09 00:43:05,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-09 00:43:06,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-09 00:43:06,068 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:43:06,113 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:43:06,114 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-09 00:43:06,114 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-09 00:43:06,120 [ scc.git] DEBUG Check current status 2024-06-09 00:43:06,121 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:43:06,125 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-06-09 00:43:06,125 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:43:06,168 [ scc.config] DEBUG Found remote.origin.url 2024-06-09 00:43:06,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-06-09 00:43:07,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-09 00:43:07,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-09 00:43:07,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-09 00:43:08,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-09 00:43:08,282 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:43:08,323 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:43:08,324 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-09 00:43:08,324 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-09 00:43:08,329 [ scc.git] DEBUG Check current status 2024-06-09 00:43:08,329 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:43:08,364 [ scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-06-09 00:43:08,364 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:43:08,411 [ scc.config] DEBUG Found remote.origin.url 2024-06-09 00:43:08,412 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-06-09 00:43:08,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-09 00:43:08,737 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-09 00:43:08,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-06-09 00:43:09,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-09 00:43:09,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-09 00:43:10,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-09 00:43:10,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-09 00:43:10,679 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:43:10,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:43:10,717 [ scc.git] DEBUG Resetting... 2024-06-09 00:43:10,717 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-06-09 00:43:10,727 [ scc.git] DEBUG HEAD is now at a906255 merge master -Dorg -Snone 2024-06-09 00:43:10,728 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-06-09 00:43:10,827 [ scc.git] DEBUG Check current status 2024-06-09 00:43:10,828 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-09 00:43:10,833 [ scc.git] DEBUG a906255 merge master -Dorg -Snone 2024-06-09 00:43:10,833 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-09 00:43:10,892 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-09 00:43:10,895 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-09 00:43:10,898 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-09 00:43:10,901 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-09 00:43:10,908 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-06-09 00:43:10,910 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-09 00:43:10,912 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-09 00:43:10,915 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-06-09 00:43:10,918 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-09 00:43:10,921 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-09 00:43:10,923 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-09 00:43:10,925 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-09 00:43:10,928 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-09 00:43:10,931 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-09 00:43:10,934 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-09 00:43:10,936 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-09 00:43:10,938 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-09 00:43:10,941 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-09 00:43:10,944 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-09 00:43:10,947 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-09 00:43:10,949 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-09 00:43:10,953 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-09 00:43:10,954 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-06-09 00:43:10,954 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-06-09 00:43:10,954 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-06-09 00:43:10,954 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-06-09 00:43:10,954 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-06-09 00:43:10,954 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-06-09 00:43:10,954 [ scc.repo] DEBUG ## PRs found: 2024-06-09 00:43:11,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-06-09 00:43:11,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/373 HTTP/1.1" 200 None 2024-06-09 00:43:11,687 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-09 00:43:12,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c8279eaae4892995e532fa290a1f76ace85afdbc HTTP/1.1" 200 None 2024-06-09 00:43:12,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c8279eaae4892995e532fa290a1f76ace85afdbc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:43:13,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c8279eaae4892995e532fa290a1f76ace85afdbc HTTP/1.1" 200 None 2024-06-09 00:43:13,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/c8279eaae4892995e532fa290a1f76ace85afdbc?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:43:13,573 [ scc.repo] DEBUG - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' 2024-06-09 00:43:13,574 [ scc.repo] DEBUG ## Branches found: 2024-06-09 00:43:13,574 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:43:13,574 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:43:13,579 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-09 00:43:13,584 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-09 00:43:13,585 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-09 00:43:13,590 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-09 00:43:13,595 [ scc.git] DEBUG Already up to date. 2024-06-09 00:43:13,596 [ scc.git] DEBUG Calling 'git fetch origin pull/373/head' 2024-06-09 00:43:14,017 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-06-09 00:43:14,017 [ scc.git] DEBUG * branch refs/pull/373/head -> FETCH_HEAD 2024-06-09 00:43:14,023 [ scc.git] DEBUG ## Unique users: [] 2024-06-09 00:43:14,023 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:43:14,023 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:43:14,028 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c8279eaae4892995e532fa290a1f76ace85afdbc' 2024-06-09 00:43:14,033 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:43:14,038 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 373 (Bump omero-test-infra from `7688c54` to `cda3ec6`) c8279eaae4892995e532fa290a1f76ace85afdbc' 2024-06-09 00:43:14,043 [ scc.git] DEBUG Already up to date. 2024-06-09 00:43:14,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:43:14,202 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-09 00:43:14,256 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:43:14,256 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:43:14,262 [ scc.repo] DEBUG ## PRs found: 2024-06-09 00:43:14,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-06-09 00:43:14,620 [ scc.repo] DEBUG ## Branches found: 2024-06-09 00:43:14,620 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-09 00:43:14,620 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:43:14,620 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:43:14,625 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-09 00:43:14,630 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-09 00:43:14,630 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-09 00:43:14,636 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-09 00:43:14,642 [ scc.git] DEBUG Already up to date. 2024-06-09 00:43:14,642 [ scc.git] DEBUG ## Unique users: [] 2024-06-09 00:43:14,642 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:43:14,642 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:43:14,648 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-09 00:43:14,689 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:43:14,690 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:43:14,695 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:43:14,734 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-09 00:43:14,740 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7addc19400> has no local changes 2024-06-09 00:43:14,740 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/)' 2024-06-09 00:43:14,748 [ scc.git] DEBUG [detached HEAD eb93a2f] merge master -Dorg -Ssuccess-only 2024-06-09 00:43:14,749 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:43:14,749 [ scc.repo] DEBUG ## PRs found: 2024-06-09 00:43:15,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-06-09 00:43:15,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-06-09 00:43:16,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-06-09 00:43:16,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-06-09 00:43:17,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:43:17,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-09 00:43:18,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-06-09 00:43:18,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:43:18,439 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-06-09 00:43:18,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-06-09 00:43:19,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-06-09 00:43:19,404 [ scc.repo] DEBUG ## Branches found: 2024-06-09 00:43:19,404 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-09 00:43:19,404 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:43:19,404 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:43:19,410 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-09 00:43:19,416 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-09 00:43:19,416 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-09 00:43:19,422 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-09 00:43:19,428 [ scc.git] DEBUG Already up to date. 2024-06-09 00:43:19,428 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-06-09 00:43:19,845 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-06-09 00:43:19,846 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-06-09 00:43:19,851 [ scc.git] DEBUG ## Unique users: [] 2024-06-09 00:43:19,851 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:43:19,851 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:43:19,857 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-06-09 00:43:19,862 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:43:19,867 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-06-09 00:43:19,888 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-09 00:43:19,891 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-06-09 00:43:19,891 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-06-09 00:43:20,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:43:20,056 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-09 00:43:20,096 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:43:20,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:43:20,101 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:43:20,149 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-09 00:43:20,155 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7adcb4c730> has no local changes 2024-06-09 00:43:20,155 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/)' 2024-06-09 00:43:20,164 [ scc.git] DEBUG [detached HEAD 6bd9fe7] merge master -Dorg -Ssuccess-only 2024-06-09 00:43:20,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:43:20,165 [ scc.repo] DEBUG ## PRs found: 2024-06-09 00:43:20,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-06-09 00:43:21,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64 HTTP/1.1" 200 None 2024-06-09 00:43:21,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64/comments HTTP/1.1" 200 None 2024-06-09 00:43:22,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-06-09 00:43:22,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:43:23,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-06-09 00:43:23,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/6dffdfe0e7ed620e791de943fad823e440b40639?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:43:23,434 [ scc.repo] DEBUG - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-06-09 00:43:23,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/63 HTTP/1.1" 200 None 2024-06-09 00:43:24,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-06-09 00:43:24,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:43:25,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-06-09 00:43:25,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:43:25,833 [ scc.repo] DEBUG - PR 63 sbesson 'Remove python-future dependency' 2024-06-09 00:43:26,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-06-09 00:43:26,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-06-09 00:43:27,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-06-09 00:43:27,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-06-09 00:43:28,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-06-09 00:43:28,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:43:29,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-06-09 00:43:29,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:43:29,518 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-06-09 00:43:30,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-06-09 00:43:30,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-06-09 00:43:30,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-06-09 00:43:31,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-06-09 00:43:31,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-06-09 00:43:31,926 [ scc.repo] DEBUG ## Branches found: 2024-06-09 00:43:31,926 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-09 00:43:31,926 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:43:31,926 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:43:31,931 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-09 00:43:31,936 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-09 00:43:31,936 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-09 00:43:31,941 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-09 00:43:31,946 [ scc.git] DEBUG Already up to date. 2024-06-09 00:43:31,947 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-06-09 00:43:32,427 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-09 00:43:32,427 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-06-09 00:43:32,432 [ scc.git] DEBUG Calling 'git fetch origin pull/63/head' 2024-06-09 00:43:32,872 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-09 00:43:32,872 [ scc.git] DEBUG * branch refs/pull/63/head -> FETCH_HEAD 2024-06-09 00:43:32,877 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-06-09 00:43:33,355 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-09 00:43:33,355 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-06-09 00:43:33,361 [ scc.git] DEBUG ## Unique users: [] 2024-06-09 00:43:33,361 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:43:33,361 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:43:33,368 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-06-09 00:43:33,374 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:43:33,380 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-06-09 00:43:33,426 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-09 00:43:33,430 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-06-09 00:43:33,430 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-06-09 00:43:33,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:43:33,585 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-06-09 00:43:33,592 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:43:33,597 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 63 (Remove python-future dependency) f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-06-09 00:43:33,650 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-06-09 00:43:33,651 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-09 00:43:33,655 [ scc.git] DEBUG setup.py | 3 +-- 2024-06-09 00:43:33,655 [ scc.git] DEBUG src/omero_cli_render.py | 9 ++------- 2024-06-09 00:43:33,655 [ scc.git] DEBUG test/integration/clitest/test_render.py | 6 +----- 2024-06-09 00:43:33,655 [ scc.git] DEBUG 3 files changed, 4 insertions(+), 14 deletions(-) 2024-06-09 00:43:33,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:43:33,999 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dffdfe0e7ed620e791de943fad823e440b40639' 2024-06-09 00:43:34,005 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:43:34,010 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Fix thumbnail generation with missing rendering definition) 6dffdfe0e7ed620e791de943fad823e440b40639' 2024-06-09 00:43:34,076 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-06-09 00:43:34,076 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_render.py 2024-06-09 00:43:34,077 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-09 00:43:34,080 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++++++++-- 2024-06-09 00:43:34,080 [ scc.git] DEBUG test/integration/clitest/test_render.py | 12 ++++++++++++ 2024-06-09 00:43:34,080 [ scc.git] DEBUG 2 files changed, 24 insertions(+), 2 deletions(-) 2024-06-09 00:43:34,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:43:34,415 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-09 00:43:34,458 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:43:34,458 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:43:34,463 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:43:34,502 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-09 00:43:34,508 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7addc19880> has no local changes 2024-06-09 00:43:34,509 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Generated by OMERO-plugins-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/)' 2024-06-09 00:43:34,516 [ scc.git] DEBUG [detached HEAD d70dd04] merge master -Dorg -Ssuccess-only 2024-06-09 00:43:34,516 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:43:34,517 [ scc.repo] DEBUG ## PRs found: 2024-06-09 00:43:34,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-06-09 00:43:35,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/161 HTTP/1.1" 200 None 2024-06-09 00:43:35,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-06-09 00:43:36,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-06-09 00:43:36,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-09 00:43:37,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:43:37,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-09 00:43:38,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-09 00:43:38,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-06-09 00:43:39,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-09 00:43:39,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-06-09 00:43:39,702 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-06-09 00:43:40,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-06-09 00:43:40,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-06-09 00:43:41,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-06-09 00:43:41,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-06-09 00:43:42,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:43:42,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-06-09 00:43:43,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:43:43,149 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-06-09 00:43:43,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-06-09 00:43:44,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-06-09 00:43:44,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-06-09 00:43:45,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-06-09 00:43:45,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:43:46,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-06-09 00:43:46,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:43:46,462 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-06-09 00:43:46,464 [ scc.repo] DEBUG ## Branches found: 2024-06-09 00:43:46,464 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-09 00:43:46,466 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:43:46,466 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:43:46,477 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-09 00:43:46,482 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-09 00:43:46,483 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-09 00:43:46,489 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-09 00:43:46,496 [ scc.git] DEBUG Already up to date. 2024-06-09 00:43:46,496 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-06-09 00:43:46,933 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-09 00:43:46,934 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-06-09 00:43:46,943 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-06-09 00:43:47,364 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-09 00:43:47,364 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-06-09 00:43:47,371 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-06-09 00:43:47,895 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-09 00:43:47,895 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-06-09 00:43:47,917 [ scc.git] DEBUG ## Unique users: [] 2024-06-09 00:43:47,918 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:43:47,918 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:43:47,940 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-09 00:43:47,950 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:43:47,957 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-09 00:43:48,006 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-06-09 00:43:48,006 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-09 00:43:48,006 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-06-09 00:43:48,006 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-09 00:43:48,007 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-09 00:43:48,013 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-09 00:43:48,020 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-09 00:43:48,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:43:48,187 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-09 00:43:48,195 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-09 00:43:48,201 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#90](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-06-09 00:43:48,206 [ scc.config] DEBUG Found github.token 2024-06-09 00:43:48,206 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-06-09 00:43:48,206 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-09 00:43:48,213 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:43:48,218 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-09 00:43:48,259 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-06-09 00:43:48,259 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-06-09 00:43:48,259 [ scc.git] DEBUG Auto-merging setup.py 2024-06-09 00:43:48,259 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-06-09 00:43:48,259 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-09 00:43:48,259 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-06-09 00:43:48,259 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-06-09 00:43:48,259 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-09 00:43:48,259 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-09 00:43:48,265 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-09 00:43:48,272 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-09 00:43:48,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:43:48,594 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-09 00:43:48,601 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-09 00:43:48,607 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#90](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-06-09 00:43:48,611 [ scc.config] DEBUG Found github.token 2024-06-09 00:43:48,612 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-06-09 00:43:48,612 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-06-09 00:43:48,618 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:43:48,623 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-06-09 00:43:48,637 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-06-09 00:43:48,637 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-09 00:43:48,637 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-09 00:43:48,641 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-06-09 00:43:48,641 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-06-09 00:43:48,641 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-06-09 00:43:48,641 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-06-09 00:43:48,641 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-06-09 00:43:48,641 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-06-09 00:43:49,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:43:49,008 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-09 00:43:49,050 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:43:49,050 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:43:49,056 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:43:49,098 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-09 00:43:49,105 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7adcb4c970> has no local changes 2024-06-09 00:43:49,105 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/)' 2024-06-09 00:43:49,115 [ scc.git] DEBUG [detached HEAD 38fad10] merge master -Dorg -Ssuccess-only 2024-06-09 00:43:49,117 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:43:49,117 [ scc.repo] DEBUG ## PRs found: 2024-06-09 00:43:49,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-06-09 00:43:49,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/563 HTTP/1.1" 200 None 2024-06-09 00:43:50,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/563/comments HTTP/1.1" 200 None 2024-06-09 00:43:50,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/acd328badf4723b6ad334eeff22205a726b61043 HTTP/1.1" 200 None 2024-06-09 00:43:51,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/acd328badf4723b6ad334eeff22205a726b61043/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:43:51,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/acd328badf4723b6ad334eeff22205a726b61043/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-09 00:43:52,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/acd328badf4723b6ad334eeff22205a726b61043 HTTP/1.1" 200 None 2024-06-09 00:43:52,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/acd328badf4723b6ad334eeff22205a726b61043?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:43:52,849 [ scc.repo] DEBUG - PR 563 will-moore 'Use path instead of re_path for all URLs' 2024-06-09 00:43:53,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/562 HTTP/1.1" 200 None 2024-06-09 00:43:53,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/562/comments HTTP/1.1" 200 None 2024-06-09 00:43:54,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/5750e2b744e687c5064df1b3ee304bfe7b5e6573 HTTP/1.1" 200 None 2024-06-09 00:43:54,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/5750e2b744e687c5064df1b3ee304bfe7b5e6573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:43:55,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/5750e2b744e687c5064df1b3ee304bfe7b5e6573/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-09 00:43:55,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/5750e2b744e687c5064df1b3ee304bfe7b5e6573 HTTP/1.1" 200 None 2024-06-09 00:43:56,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/5750e2b744e687c5064df1b3ee304bfe7b5e6573?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:43:56,185 [ scc.repo] DEBUG - PR 562 will-moore 'Add changelog 7.0.0' 2024-06-09 00:43:56,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-06-09 00:43:57,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-06-09 00:43:57,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-06-09 00:43:58,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:43:58,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-09 00:43:59,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-06-09 00:43:59,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:43:59,534 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-06-09 00:44:00,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-06-09 00:44:00,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-06-09 00:44:01,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:44:01,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-09 00:44:02,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-06-09 00:44:02,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:44:02,533 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature' 2024-06-09 00:44:02,533 [ scc.repo] DEBUG ## Branches found: 2024-06-09 00:44:02,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-09 00:44:02,534 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:44:02,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:02,539 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-09 00:44:02,547 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-09 00:44:02,547 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-09 00:44:02,554 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-09 00:44:02,560 [ scc.git] DEBUG Already up to date. 2024-06-09 00:44:02,561 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2024-06-09 00:44:03,257 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-09 00:44:03,257 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2024-06-09 00:44:03,262 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-06-09 00:44:03,839 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-09 00:44:03,839 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-06-09 00:44:03,844 [ scc.git] DEBUG Calling 'git fetch origin pull/562/head' 2024-06-09 00:44:04,283 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-09 00:44:04,283 [ scc.git] DEBUG * branch refs/pull/562/head -> FETCH_HEAD 2024-06-09 00:44:04,288 [ scc.git] DEBUG Calling 'git fetch origin pull/563/head' 2024-06-09 00:44:04,730 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-09 00:44:04,730 [ scc.git] DEBUG * branch refs/pull/563/head -> FETCH_HEAD 2024-06-09 00:44:04,735 [ scc.git] DEBUG ## Unique users: [] 2024-06-09 00:44:04,736 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:44:04,736 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:04,741 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-06-09 00:44:04,748 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:04,753 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) 6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-06-09 00:44:04,920 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-09 00:44:04,926 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++- 2024-06-09 00:44:04,927 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++ 2024-06-09 00:44:04,927 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++ 2024-06-09 00:44:04,927 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++- 2024-06-09 00:44:04,927 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 + 2024-06-09 00:44:04,927 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++- 2024-06-09 00:44:04,927 [ scc.git] DEBUG src/js/views/right_panel_view.js | 74 +++++++++++++++++++++++++++++- 2024-06-09 00:44:04,927 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++ 2024-06-09 00:44:04,927 [ scc.git] DEBUG src/templates/rois_form.template.html | 7 +++ 2024-06-09 00:44:04,927 [ scc.git] DEBUG 9 files changed, 270 insertions(+), 5 deletions(-) 2024-06-09 00:44:05,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:44:05,090 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-06-09 00:44:05,099 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:05,105 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-06-09 00:44:05,234 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-06-09 00:44:05,234 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-06-09 00:44:05,234 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-06-09 00:44:05,235 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-09 00:44:05,245 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-06-09 00:44:05,245 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-06-09 00:44:05,245 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-06-09 00:44:05,245 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-06-09 00:44:05,245 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-06-09 00:44:05,245 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-06-09 00:44:05,246 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-06-09 00:44:05,246 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-06-09 00:44:05,246 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-06-09 00:44:05,246 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-06-09 00:44:05,246 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-06-09 00:44:05,246 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-06-09 00:44:05,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:44:05,503 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5750e2b744e687c5064df1b3ee304bfe7b5e6573' 2024-06-09 00:44:05,513 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:05,519 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 562 (Add changelog 7.0.0) 5750e2b744e687c5064df1b3ee304bfe7b5e6573' 2024-06-09 00:44:05,569 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-09 00:44:05,573 [ scc.git] DEBUG CHANGELOG.md | 10 ++++++++++ 2024-06-09 00:44:05,573 [ scc.git] DEBUG README.rst | 2 +- 2024-06-09 00:44:05,573 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 1 deletion(-) 2024-06-09 00:44:05,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:44:05,913 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...acd328badf4723b6ad334eeff22205a726b61043' 2024-06-09 00:44:05,921 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:05,929 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 563 (Use path instead of re_path for all URLs) acd328badf4723b6ad334eeff22205a726b61043' 2024-06-09 00:44:05,948 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-09 00:44:05,951 [ scc.git] DEBUG omero_figure/urls.py | 68 +++++++++++++++++++++++++--------------------------- 2024-06-09 00:44:05,952 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 36 deletions(-) 2024-06-09 00:44:06,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:44:06,329 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-09 00:44:06,371 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:44:06,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:06,377 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:44:06,415 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-09 00:44:06,424 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7adcb07bb0> has no local changes 2024-06-09 00:44:06,424 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 560 will-moore 'Max projection bytes' (exclude comment) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 562 will-moore 'Add changelog 7.0.0' - PR 563 will-moore 'Use path instead of re_path for all URLs' Generated by OMERO-plugins-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/)' 2024-06-09 00:44:06,432 [ scc.git] DEBUG [detached HEAD 089a4e21] merge master -Dorg -Ssuccess-only 2024-06-09 00:44:06,433 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:44:06,433 [ scc.repo] DEBUG ## PRs found: 2024-06-09 00:44:06,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-06-09 00:44:07,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-06-09 00:44:07,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-06-09 00:44:08,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-06-09 00:44:08,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:44:09,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-06-09 00:44:09,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:44:09,676 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-06-09 00:44:09,676 [ scc.repo] DEBUG ## Branches found: 2024-06-09 00:44:09,676 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-09 00:44:09,677 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:44:09,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:09,682 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-09 00:44:09,687 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-09 00:44:09,688 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-09 00:44:09,696 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-09 00:44:09,703 [ scc.git] DEBUG Already up to date. 2024-06-09 00:44:09,704 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-06-09 00:44:10,128 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-06-09 00:44:10,128 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-06-09 00:44:10,132 [ scc.git] DEBUG ## Unique users: [] 2024-06-09 00:44:10,133 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:44:10,133 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:10,139 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-06-09 00:44:10,144 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:10,149 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-06-09 00:44:10,191 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-06-09 00:44:10,192 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-09 00:44:10,195 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-06-09 00:44:10,195 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-06-09 00:44:10,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:44:10,356 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-09 00:44:10,398 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:44:10,398 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:10,404 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:44:10,447 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-09 00:44:10,454 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7adcb5ddf0> has no local changes 2024-06-09 00:44:10,454 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/)' 2024-06-09 00:44:10,464 [ scc.git] DEBUG [detached HEAD 34ebb43] merge master -Dorg -Ssuccess-only 2024-06-09 00:44:10,464 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:44:10,464 [ scc.repo] DEBUG ## PRs found: 2024-06-09 00:44:10,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-06-09 00:44:11,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-06-09 00:44:11,328 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-09 00:44:11,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-06-09 00:44:12,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:44:12,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-09 00:44:13,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-06-09 00:44:13,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:44:13,908 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-06-09 00:44:13,908 [ scc.repo] DEBUG ## Branches found: 2024-06-09 00:44:13,909 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-09 00:44:13,909 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:44:13,909 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:13,914 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-09 00:44:13,920 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-09 00:44:13,920 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-09 00:44:13,925 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-09 00:44:13,933 [ scc.git] DEBUG Already up to date. 2024-06-09 00:44:13,933 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-06-09 00:44:14,339 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-06-09 00:44:14,339 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-06-09 00:44:14,343 [ scc.git] DEBUG ## Unique users: [] 2024-06-09 00:44:14,343 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:44:14,344 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:14,349 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-06-09 00:44:14,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:14,358 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-06-09 00:44:14,368 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-09 00:44:14,372 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-06-09 00:44:14,372 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-06-09 00:44:14,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:44:14,523 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-09 00:44:14,560 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:44:14,560 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:14,565 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:44:14,600 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-09 00:44:14,607 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7adcb5d340> has no local changes 2024-06-09 00:44:14,607 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/)' 2024-06-09 00:44:14,615 [ scc.git] DEBUG [detached HEAD d00e646] merge master -Dorg -Ssuccess-only 2024-06-09 00:44:14,616 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:44:14,616 [ scc.repo] DEBUG ## PRs found: 2024-06-09 00:44:15,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-06-09 00:44:15,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-06-09 00:44:16,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-06-09 00:44:16,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-06-09 00:44:17,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:44:17,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-09 00:44:18,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-06-09 00:44:18,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:44:18,467 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-06-09 00:44:18,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-06-09 00:44:19,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-06-09 00:44:19,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-06-09 00:44:20,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:44:20,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-09 00:44:21,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-06-09 00:44:21,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:44:21,885 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-06-09 00:44:22,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-06-09 00:44:22,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-06-09 00:44:23,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-06-09 00:44:23,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:44:24,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-06-09 00:44:24,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:44:24,718 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-06-09 00:44:24,718 [ scc.repo] DEBUG ## Branches found: 2024-06-09 00:44:24,718 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-09 00:44:24,719 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:44:24,719 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:24,725 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-09 00:44:24,730 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-09 00:44:24,730 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-09 00:44:24,737 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-09 00:44:24,743 [ scc.git] DEBUG Already up to date. 2024-06-09 00:44:24,743 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-06-09 00:44:25,272 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-09 00:44:25,272 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-06-09 00:44:25,278 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-06-09 00:44:26,227 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-09 00:44:26,227 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-06-09 00:44:26,232 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-06-09 00:44:26,673 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-09 00:44:26,674 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-06-09 00:44:26,679 [ scc.git] DEBUG ## Unique users: [] 2024-06-09 00:44:26,679 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:44:26,679 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:26,685 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-06-09 00:44:26,692 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:26,697 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-06-09 00:44:26,770 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-06-09 00:44:26,779 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-09 00:44:26,784 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-06-09 00:44:26,784 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-06-09 00:44:26,784 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-06-09 00:44:26,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:44:26,944 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-06-09 00:44:26,952 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:26,958 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-06-09 00:44:27,082 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-06-09 00:44:27,082 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-06-09 00:44:27,082 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-06-09 00:44:27,082 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-06-09 00:44:27,082 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-09 00:44:27,088 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-06-09 00:44:27,088 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-06-09 00:44:27,088 [ scc.git] DEBUG src/app/header.html | 5 + 2024-06-09 00:44:27,088 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-06-09 00:44:27,088 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-06-09 00:44:27,088 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-06-09 00:44:27,088 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-06-09 00:44:27,088 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-06-09 00:44:27,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:44:27,384 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-06-09 00:44:27,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:27,397 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-06-09 00:44:27,450 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-06-09 00:44:27,451 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-09 00:44:27,454 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-06-09 00:44:27,454 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-06-09 00:44:27,455 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-06-09 00:44:27,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:44:27,791 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-09 00:44:27,834 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:44:27,834 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:27,839 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:44:27,888 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-09 00:44:27,896 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7adcb348e0> has no local changes 2024-06-09 00:44:27,896 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' Generated by OMERO-plugins-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/)' 2024-06-09 00:44:27,908 [ scc.git] DEBUG [detached HEAD 1362f15] merge master -Dorg -Ssuccess-only 2024-06-09 00:44:27,908 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:44:27,909 [ scc.repo] DEBUG ## PRs found: 2024-06-09 00:44:28,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-06-09 00:44:28,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-06-09 00:44:29,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-06-09 00:44:29,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-06-09 00:44:30,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:44:30,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-09 00:44:31,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-06-09 00:44:31,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:44:31,717 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-06-09 00:44:31,718 [ scc.repo] DEBUG ## Branches found: 2024-06-09 00:44:31,718 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-09 00:44:31,718 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:44:31,718 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:31,724 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-09 00:44:31,729 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-09 00:44:31,729 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-09 00:44:31,736 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-09 00:44:31,743 [ scc.git] DEBUG Already up to date. 2024-06-09 00:44:31,743 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-06-09 00:44:32,149 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-06-09 00:44:32,149 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-06-09 00:44:32,154 [ scc.git] DEBUG ## Unique users: [] 2024-06-09 00:44:32,155 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:44:32,155 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:32,161 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-06-09 00:44:32,168 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:32,173 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-06-09 00:44:32,185 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-09 00:44:32,188 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-06-09 00:44:32,188 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-06-09 00:44:32,188 [ scc.git] DEBUG requirements.txt | 2 +- 2024-06-09 00:44:32,188 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-06-09 00:44:32,188 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-06-09 00:44:32,188 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-06-09 00:44:32,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:44:32,378 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-09 00:44:32,427 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:44:32,429 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:32,436 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:44:32,477 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-09 00:44:32,483 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7adc2d3bb0> has no local changes 2024-06-09 00:44:32,484 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/)' 2024-06-09 00:44:32,492 [ scc.git] DEBUG [detached HEAD 390171f] merge master -Dorg -Ssuccess-only 2024-06-09 00:44:32,493 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:44:32,493 [ scc.repo] DEBUG ## PRs found: 2024-06-09 00:44:32,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-06-09 00:44:33,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-06-09 00:44:33,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-06-09 00:44:34,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-06-09 00:44:34,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:44:35,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-06-09 00:44:35,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:44:35,768 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-06-09 00:44:36,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-06-09 00:44:36,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-06-09 00:44:37,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-06-09 00:44:37,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:44:38,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-06-09 00:44:38,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:44:38,569 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-06-09 00:44:38,569 [ scc.repo] DEBUG ## Branches found: 2024-06-09 00:44:38,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-09 00:44:38,569 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:44:38,569 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:38,575 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-09 00:44:38,580 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-09 00:44:38,580 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-09 00:44:38,586 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-09 00:44:38,591 [ scc.git] DEBUG Already up to date. 2024-06-09 00:44:38,591 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-06-09 00:44:39,076 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-06-09 00:44:39,076 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-06-09 00:44:39,081 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-06-09 00:44:39,505 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-06-09 00:44:39,505 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-06-09 00:44:39,510 [ scc.git] DEBUG ## Unique users: [] 2024-06-09 00:44:39,511 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:44:39,511 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:39,516 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-09 00:44:39,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:39,527 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-09 00:44:39,623 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-06-09 00:44:39,623 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-06-09 00:44:39,623 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-06-09 00:44:39,623 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-06-09 00:44:39,624 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-09 00:44:39,624 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-09 00:44:39,640 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-09 00:44:39,649 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-09 00:44:39,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:44:39,813 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-09 00:44:39,820 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-09 00:44:39,826 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#90](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-06-09 00:44:39,830 [ scc.config] DEBUG Found github.token 2024-06-09 00:44:39,830 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-06-09 00:44:39,830 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-09 00:44:39,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:39,840 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-09 00:44:39,896 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-06-09 00:44:39,897 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-06-09 00:44:39,897 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-06-09 00:44:39,897 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-09 00:44:39,897 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-09 00:44:39,903 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-09 00:44:39,910 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-09 00:44:40,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:44:40,243 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-09 00:44:40,250 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-09 00:44:40,254 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#90](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-06-09 00:44:40,259 [ scc.config] DEBUG Found github.token 2024-06-09 00:44:40,259 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-06-09 00:44:40,259 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-09 00:44:40,298 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:44:40,299 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:40,304 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:44:40,343 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-09 00:44:40,360 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7adcb1ff40> has no local changes 2024-06-09 00:44:40,360 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/)' 2024-06-09 00:44:40,373 [ scc.git] DEBUG [detached HEAD e69da68] merge master -Dorg -Ssuccess-only 2024-06-09 00:44:40,373 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:44:40,374 [ scc.repo] DEBUG ## PRs found: 2024-06-09 00:44:40,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-06-09 00:44:41,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-06-09 00:44:41,292 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-09 00:44:41,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-06-09 00:44:42,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:44:42,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-09 00:44:43,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-06-09 00:44:43,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:44:43,704 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-06-09 00:44:44,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-06-09 00:44:44,177 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-09 00:44:44,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-06-09 00:44:45,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:44:45,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-09 00:44:46,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-06-09 00:44:46,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:44:46,576 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-06-09 00:44:47,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-06-09 00:44:47,046 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-09 00:44:47,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-06-09 00:44:48,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:44:48,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-09 00:44:49,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-06-09 00:44:49,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:44:49,566 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-06-09 00:44:50,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-06-09 00:44:50,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-06-09 00:44:50,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-06-09 00:44:51,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-06-09 00:44:51,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-06-09 00:44:52,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-06-09 00:44:52,363 [ scc.repo] DEBUG ## Branches found: 2024-06-09 00:44:52,364 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-09 00:44:52,364 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:44:52,364 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:52,370 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-09 00:44:52,375 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-09 00:44:52,375 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-09 00:44:52,381 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-09 00:44:52,387 [ scc.git] DEBUG Already up to date. 2024-06-09 00:44:52,387 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-06-09 00:44:52,765 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-09 00:44:52,765 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-06-09 00:44:52,771 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-06-09 00:44:53,152 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-09 00:44:53,153 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-06-09 00:44:53,159 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-06-09 00:44:53,555 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-09 00:44:53,555 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-06-09 00:44:53,560 [ scc.git] DEBUG ## Unique users: [] 2024-06-09 00:44:53,560 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:44:53,560 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:53,566 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-06-09 00:44:53,573 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:53,578 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-06-09 00:44:53,589 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-09 00:44:53,592 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-06-09 00:44:53,592 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-06-09 00:44:53,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:44:53,757 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-06-09 00:44:53,765 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:53,771 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-06-09 00:44:53,814 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-09 00:44:53,814 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-09 00:44:53,817 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-06-09 00:44:53,817 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-06-09 00:44:54,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:44:54,153 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-06-09 00:44:54,160 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:54,167 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-06-09 00:44:54,207 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-09 00:44:54,208 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-09 00:44:54,212 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-06-09 00:44:54,212 [ scc.git] DEBUG package.json | 2 +- 2024-06-09 00:44:54,212 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-06-09 00:44:54,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:44:54,551 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-09 00:44:54,594 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:44:54,595 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:54,600 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:44:54,645 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-09 00:44:54,653 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7adc28c640> has no local changes 2024-06-09 00:44:54,653 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/)' 2024-06-09 00:44:54,664 [ scc.git] DEBUG [detached HEAD c9dbb75] merge master -Dorg -Ssuccess-only 2024-06-09 00:44:54,665 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:44:54,665 [ scc.repo] DEBUG ## PRs found: 2024-06-09 00:44:55,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-06-09 00:44:55,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-06-09 00:44:56,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-06-09 00:44:56,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:44:57,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-06-09 00:44:57,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:44:57,518 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-06-09 00:44:57,518 [ scc.repo] DEBUG ## Branches found: 2024-06-09 00:44:57,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-09 00:44:57,518 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:44:57,518 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:57,524 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-09 00:44:57,531 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-09 00:44:57,532 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-09 00:44:57,538 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-09 00:44:57,546 [ scc.git] DEBUG Already up to date. 2024-06-09 00:44:57,546 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-06-09 00:44:57,942 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-06-09 00:44:57,942 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-06-09 00:44:57,948 [ scc.git] DEBUG ## Unique users: [] 2024-06-09 00:44:57,949 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:44:57,949 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:57,955 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-06-09 00:44:57,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:57,969 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-06-09 00:44:57,991 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-09 00:44:58,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:44:58,160 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-09 00:44:58,204 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:44:58,205 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:44:58,211 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:44:58,256 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-09 00:44:58,264 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7adcafdbe0> has no local changes 2024-06-09 00:44:58,264 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/)' 2024-06-09 00:44:58,294 [ scc.git] DEBUG [detached HEAD 2805dbe] merge master -Dorg -Ssuccess-only 2024-06-09 00:44:58,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:44:58,295 [ scc.repo] DEBUG ## PRs found: 2024-06-09 00:44:58,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-06-09 00:44:59,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-06-09 00:44:59,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-06-09 00:45:00,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-06-09 00:45:00,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-06-09 00:45:01,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:45:01,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-06-09 00:45:01,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:45:01,995 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-06-09 00:45:01,996 [ scc.repo] DEBUG ## Branches found: 2024-06-09 00:45:01,996 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-09 00:45:01,996 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:01,996 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:02,002 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-09 00:45:02,008 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-09 00:45:02,008 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-09 00:45:02,014 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-09 00:45:02,021 [ scc.git] DEBUG Already up to date. 2024-06-09 00:45:02,021 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-06-09 00:45:02,543 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-06-09 00:45:02,543 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-06-09 00:45:02,548 [ scc.git] DEBUG ## Unique users: [] 2024-06-09 00:45:02,548 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:02,548 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:02,555 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-06-09 00:45:02,561 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:02,566 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-06-09 00:45:02,575 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-06-09 00:45:02,576 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-09 00:45:02,578 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-06-09 00:45:02,581 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-06-09 00:45:02,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:02,752 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-09 00:45:02,792 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:02,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:02,798 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:45:02,841 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-09 00:45:02,848 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7adc241550> has no local changes 2024-06-09 00:45:02,848 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/)' 2024-06-09 00:45:02,856 [ scc.git] DEBUG [detached HEAD 6217351] merge master -Dorg -Ssuccess-only 2024-06-09 00:45:02,857 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:02,857 [ scc.repo] DEBUG ## PRs found: 2024-06-09 00:45:03,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-06-09 00:45:03,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-06-09 00:45:04,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-06-09 00:45:04,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-06-09 00:45:05,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:45:05,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-06-09 00:45:06,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:45:06,206 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-06-09 00:45:06,206 [ scc.repo] DEBUG ## Branches found: 2024-06-09 00:45:06,206 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-09 00:45:06,207 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:06,207 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:06,213 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-09 00:45:06,219 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-09 00:45:06,219 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-09 00:45:06,226 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-09 00:45:06,233 [ scc.git] DEBUG Already up to date. 2024-06-09 00:45:06,233 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-06-09 00:45:06,658 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-06-09 00:45:06,658 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-06-09 00:45:06,663 [ scc.git] DEBUG ## Unique users: [] 2024-06-09 00:45:06,663 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:06,663 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:06,669 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-09 00:45:06,678 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:06,684 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-09 00:45:06,726 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-06-09 00:45:06,726 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-06-09 00:45:06,726 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-06-09 00:45:06,726 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-06-09 00:45:06,726 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-06-09 00:45:06,726 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-06-09 00:45:06,726 [ scc.git] DEBUG Auto-merging setup.py 2024-06-09 00:45:06,726 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-06-09 00:45:06,727 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-09 00:45:06,727 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-09 00:45:06,733 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-06-09 00:45:06,739 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-06-09 00:45:06,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:06,886 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-09 00:45:06,893 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-06-09 00:45:06,899 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#90](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/views.py - omero_signup/urls.py - setup.py --conflicts 2024-06-09 00:45:06,904 [ scc.config] DEBUG Found github.token 2024-06-09 00:45:06,905 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-06-09 00:45:06,905 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-09 00:45:06,944 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:06,944 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:06,949 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:45:06,990 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-09 00:45:06,997 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7adc2bef40> has no local changes 2024-06-09 00:45:06,997 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/)' 2024-06-09 00:45:07,007 [ scc.git] DEBUG [detached HEAD 5eaba37] merge master -Dorg -Ssuccess-only 2024-06-09 00:45:07,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:07,008 [ scc.repo] DEBUG ## PRs found: 2024-06-09 00:45:07,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-06-09 00:45:07,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-06-09 00:45:08,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-06-09 00:45:08,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-06-09 00:45:09,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:45:09,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-06-09 00:45:10,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:45:10,167 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-06-09 00:45:10,167 [ scc.repo] DEBUG ## Branches found: 2024-06-09 00:45:10,167 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-09 00:45:10,167 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:10,167 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:10,174 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-09 00:45:10,180 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-09 00:45:10,180 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-09 00:45:10,187 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-09 00:45:10,194 [ scc.git] DEBUG Already up to date. 2024-06-09 00:45:10,194 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-06-09 00:45:10,681 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-06-09 00:45:10,682 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-06-09 00:45:10,687 [ scc.git] DEBUG ## Unique users: [] 2024-06-09 00:45:10,687 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:10,687 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:10,694 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-06-09 00:45:10,702 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:10,708 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-06-09 00:45:10,735 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-09 00:45:10,739 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-06-09 00:45:10,739 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-06-09 00:45:10,739 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-06-09 00:45:10,739 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-06-09 00:45:10,739 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-06-09 00:45:10,739 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-06-09 00:45:10,739 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-06-09 00:45:10,739 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-06-09 00:45:10,739 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-06-09 00:45:10,739 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-06-09 00:45:10,739 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-06-09 00:45:10,739 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-06-09 00:45:10,739 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-06-09 00:45:10,739 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-06-09 00:45:10,739 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-06-09 00:45:10,739 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-06-09 00:45:10,739 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-06-09 00:45:10,742 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-06-09 00:45:10,742 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-06-09 00:45:10,742 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-06-09 00:45:10,742 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-06-09 00:45:10,742 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-06-09 00:45:10,742 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-06-09 00:45:10,742 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-06-09 00:45:10,742 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-06-09 00:45:10,742 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-06-09 00:45:10,743 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-06-09 00:45:10,743 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-06-09 00:45:10,743 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-06-09 00:45:10,743 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-06-09 00:45:10,743 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-06-09 00:45:10,743 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-06-09 00:45:10,743 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-06-09 00:45:10,743 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-06-09 00:45:10,743 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-06-09 00:45:10,743 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-06-09 00:45:10,743 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-06-09 00:45:10,743 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-06-09 00:45:10,743 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-06-09 00:45:10,743 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-06-09 00:45:10,743 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-06-09 00:45:10,743 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-06-09 00:45:10,743 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-06-09 00:45:10,743 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-06-09 00:45:10,743 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-06-09 00:45:10,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:10,958 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-09 00:45:10,998 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:10,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:11,005 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:45:11,045 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-09 00:45:11,053 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7adc241730> has no local changes 2024-06-09 00:45:11,053 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/)' 2024-06-09 00:45:11,062 [ scc.git] DEBUG [detached HEAD 10fe649] merge master -Dorg -Ssuccess-only 2024-06-09 00:45:11,063 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:11,063 [ scc.repo] DEBUG ## PRs found: 2024-06-09 00:45:11,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-06-09 00:45:11,448 [ scc.repo] DEBUG ## Branches found: 2024-06-09 00:45:11,448 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-09 00:45:11,448 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:11,448 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:11,454 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-09 00:45:11,459 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-09 00:45:11,459 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-09 00:45:11,465 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-09 00:45:11,470 [ scc.git] DEBUG Already up to date. 2024-06-09 00:45:11,471 [ scc.git] DEBUG ## Unique users: [] 2024-06-09 00:45:11,471 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:11,471 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:11,476 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-09 00:45:11,514 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:11,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:11,520 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:45:11,557 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-09 00:45:11,564 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7adc252b80> has no local changes 2024-06-09 00:45:11,564 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/)' 2024-06-09 00:45:11,572 [ scc.git] DEBUG [detached HEAD 4e11c72] merge master -Dorg -Ssuccess-only 2024-06-09 00:45:11,573 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:11,573 [ scc.repo] DEBUG ## PRs found: 2024-06-09 00:45:11,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-06-09 00:45:11,910 [ scc.repo] DEBUG ## Branches found: 2024-06-09 00:45:11,910 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-09 00:45:11,911 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:11,911 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:11,917 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-09 00:45:11,922 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-09 00:45:11,922 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-09 00:45:11,929 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-09 00:45:11,937 [ scc.git] DEBUG Already up to date. 2024-06-09 00:45:11,937 [ scc.git] DEBUG ## Unique users: [] 2024-06-09 00:45:11,937 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:11,937 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:11,943 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-09 00:45:11,990 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:11,991 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:11,998 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:45:12,043 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-09 00:45:12,051 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7adc28ad90> has no local changes 2024-06-09 00:45:12,051 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/)' 2024-06-09 00:45:12,062 [ scc.git] DEBUG [detached HEAD 0f59c38] merge master -Dorg -Ssuccess-only 2024-06-09 00:45:12,062 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:12,062 [ scc.git] INFO Overriding base-branch from master to main 2024-06-09 00:45:12,063 [ scc.repo] DEBUG ## PRs found: 2024-06-09 00:45:12,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-06-09 00:45:12,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-06-09 00:45:13,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-06-09 00:45:13,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-06-09 00:45:14,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-06-09 00:45:14,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:45:15,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-09 00:45:15,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-06-09 00:45:16,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:45:16,130 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-06-09 00:45:16,130 [ scc.repo] DEBUG ## Branches found: 2024-06-09 00:45:16,130 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-09 00:45:16,130 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:16,130 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:16,136 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-06-09 00:45:16,141 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-09 00:45:16,141 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-06-09 00:45:16,147 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-06-09 00:45:16,152 [ scc.git] DEBUG Already up to date. 2024-06-09 00:45:16,153 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-06-09 00:45:16,661 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-06-09 00:45:16,661 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-06-09 00:45:16,666 [ scc.git] DEBUG ## Unique users: [] 2024-06-09 00:45:16,666 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:16,666 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:16,672 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-09 00:45:16,678 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:16,684 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-09 00:45:16,712 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-06-09 00:45:16,712 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-06-09 00:45:16,712 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-09 00:45:16,713 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-09 00:45:16,719 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-06-09 00:45:16,728 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-06-09 00:45:16,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:16,886 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-09 00:45:16,893 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-06-09 00:45:16,899 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#90](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-06-09 00:45:16,905 [ scc.config] DEBUG Found github.token 2024-06-09 00:45:16,905 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-06-09 00:45:16,906 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-09 00:45:16,944 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:16,944 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:16,950 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:45:16,988 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-09 00:45:16,996 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7adc2876a0> has no local changes 2024-06-09 00:45:16,996 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/)' 2024-06-09 00:45:17,006 [ scc.git] DEBUG [detached HEAD 26ab4b2] merge master -Dorg -Ssuccess-only 2024-06-09 00:45:17,007 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:17,007 [ scc.repo] DEBUG ## PRs found: 2024-06-09 00:45:17,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-06-09 00:45:17,337 [ scc.repo] DEBUG ## Branches found: 2024-06-09 00:45:17,337 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-09 00:45:17,337 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:17,337 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:17,343 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-09 00:45:17,348 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-09 00:45:17,348 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-09 00:45:17,354 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-09 00:45:17,359 [ scc.git] DEBUG Already up to date. 2024-06-09 00:45:17,359 [ scc.git] DEBUG ## Unique users: [] 2024-06-09 00:45:17,359 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:17,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:17,365 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-09 00:45:17,403 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:17,403 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:17,409 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:45:17,446 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-09 00:45:17,452 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7adc257e80> has no local changes 2024-06-09 00:45:17,452 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/)' 2024-06-09 00:45:17,461 [ scc.git] DEBUG [detached HEAD 0ae9dbc] merge master -Dorg -Ssuccess-only 2024-06-09 00:45:17,461 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:17,461 [ scc.repo] DEBUG ## PRs found: 2024-06-09 00:45:17,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-06-09 00:45:17,770 [ scc.repo] DEBUG ## Branches found: 2024-06-09 00:45:17,770 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-09 00:45:17,770 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:17,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:17,777 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-09 00:45:17,782 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-09 00:45:17,783 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-09 00:45:17,788 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-09 00:45:17,794 [ scc.git] DEBUG Already up to date. 2024-06-09 00:45:17,794 [ scc.git] DEBUG ## Unique users: [] 2024-06-09 00:45:17,794 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:17,794 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:17,799 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-09 00:45:17,837 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:17,838 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:17,843 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:45:17,884 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-09 00:45:17,891 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7adc1bf400> has no local changes 2024-06-09 00:45:17,891 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/)' 2024-06-09 00:45:17,899 [ scc.git] DEBUG [detached HEAD 103fb17] merge master -Dorg -Ssuccess-only 2024-06-09 00:45:17,900 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:17,900 [ scc.repo] DEBUG ## PRs found: 2024-06-09 00:45:18,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-06-09 00:45:18,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-06-09 00:45:19,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-06-09 00:45:19,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-06-09 00:45:20,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:45:20,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-06-09 00:45:21,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:45:21,058 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-06-09 00:45:21,058 [ scc.repo] DEBUG ## Branches found: 2024-06-09 00:45:21,058 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-09 00:45:21,058 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:21,059 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:21,064 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-09 00:45:21,069 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-09 00:45:21,069 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-09 00:45:21,075 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-09 00:45:21,080 [ scc.git] DEBUG Already up to date. 2024-06-09 00:45:21,081 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-06-09 00:45:21,481 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-06-09 00:45:21,481 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-06-09 00:45:21,486 [ scc.git] DEBUG ## Unique users: [] 2024-06-09 00:45:21,486 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:21,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:21,491 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-09 00:45:21,498 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:21,502 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-09 00:45:21,538 [ scc.git] DEBUG Auto-merging Dockerfile 2024-06-09 00:45:21,538 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-06-09 00:45:21,538 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-09 00:45:21,539 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-09 00:45:21,546 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-06-09 00:45:21,555 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-06-09 00:45:21,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:21,720 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-09 00:45:21,726 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-06-09 00:45:21,732 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#90](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-06-09 00:45:21,736 [ scc.config] DEBUG Found github.token 2024-06-09 00:45:21,737 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-06-09 00:45:21,737 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-09 00:45:21,775 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:21,775 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:21,781 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:45:21,822 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-09 00:45:21,829 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7adc204b80> has no local changes 2024-06-09 00:45:21,830 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/)' 2024-06-09 00:45:21,841 [ scc.git] DEBUG [detached HEAD 475acc9] merge master -Dorg -Ssuccess-only 2024-06-09 00:45:21,847 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:21,848 [ scc.git] INFO Overriding base-branch from master to develop 2024-06-09 00:45:21,848 [ scc.repo] DEBUG ## PRs found: 2024-06-09 00:45:22,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-06-09 00:45:22,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-06-09 00:45:23,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-06-09 00:45:23,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-06-09 00:45:24,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-06-09 00:45:24,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-06-09 00:45:25,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-06-09 00:45:25,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-06-09 00:45:26,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-09 00:45:26,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-06-09 00:45:26,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-06-09 00:45:26,957 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-06-09 00:45:27,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-06-09 00:45:27,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-06-09 00:45:28,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-06-09 00:45:28,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-06-09 00:45:28,913 [ scc.repo] DEBUG ## Branches found: 2024-06-09 00:45:28,913 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-09 00:45:28,913 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:28,913 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:28,919 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-06-09 00:45:28,927 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-09 00:45:28,927 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-06-09 00:45:28,934 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-06-09 00:45:28,940 [ scc.git] DEBUG Already up to date. 2024-06-09 00:45:28,940 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-06-09 00:45:29,399 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-06-09 00:45:29,400 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-06-09 00:45:29,404 [ scc.git] DEBUG ## Unique users: [] 2024-06-09 00:45:29,404 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:29,404 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:29,411 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-09 00:45:29,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:29,425 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-09 00:45:29,505 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-06-09 00:45:29,505 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-06-09 00:45:29,505 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-09 00:45:29,506 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-09 00:45:29,514 [ scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a' 2024-06-09 00:45:29,524 [ scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-06-09 00:45:29,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:29,687 [ scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-09 00:45:29,696 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a' 2024-06-09 00:45:29,704 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#90](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-06-09 00:45:29,711 [ scc.config] DEBUG Found github.token 2024-06-09 00:45:29,712 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-06-09 00:45:29,712 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-09 00:45:29,763 [ scc.git] DEBUG Get sha1 of %s 2024-06-09 00:45:29,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-09 00:45:29,776 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:45:29,829 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-09 00:45:29,837 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7adc208d60> has no local changes 2024-06-09 00:45:29,837 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/)' 2024-06-09 00:45:29,849 [ scc.git] DEBUG [detached HEAD aa1a730] merge master -Dorg -Ssuccess-only 2024-06-09 00:45:29,850 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:29,850 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-09 00:45:29,942 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-06-09 00:45:30,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:30,116 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-06-09 00:45:30,124 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-06-09 00:45:30,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:30,543 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-06-09 00:45:30,553 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-06-09 00:45:30,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:30,951 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-06-09 00:45:30,959 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-06-09 00:45:31,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:31,359 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-06-09 00:45:31,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:31,765 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-06-09 00:45:31,774 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-06-09 00:45:32,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:32,179 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-06-09 00:45:32,189 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-06-09 00:45:32,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:32,601 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-06-09 00:45:32,609 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-06-09 00:45:32,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:33,011 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-06-09 00:45:33,019 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-06-09 00:45:33,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:33,430 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-06-09 00:45:33,438 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-06-09 00:45:33,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:33,823 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-06-09 00:45:33,829 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-06-09 00:45:34,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:34,228 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-06-09 00:45:34,235 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-06-09 00:45:34,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:34,656 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-06-09 00:45:34,664 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-06-09 00:45:35,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:35,074 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-06-09 00:45:35,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:35,485 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-06-09 00:45:35,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:35,895 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-06-09 00:45:35,901 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-06-09 00:45:36,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:36,317 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-06-09 00:45:36,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:36,730 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-06-09 00:45:37,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:37,132 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-06-09 00:45:37,138 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-06-09 00:45:37,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:37,544 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-06-09 00:45:37,549 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-06-09 00:45:37,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:37,943 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-06-09 00:45:37,949 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-06-09 00:45:38,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:38,359 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-06-09 00:45:38,364 [ scc.config] DEBUG Found submodule.scripts.url 2024-06-09 00:45:38,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-09 00:45:38,778 [ scc.config] DEBUG Found submodule.scripts.branch 2024-06-09 00:45:38,778 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-09 00:45:38,865 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7addc5d2e0> has local changes 2024-06-09 00:45:38,865 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 560 will-moore 'Max projection bytes' (exclude comment) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 562 will-moore 'Add changelog 7.0.0' - PR 563 will-moore 'Use path instead of re_path for all URLs' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#90 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/90/)' 2024-06-09 00:45:38,884 [ scc.git] DEBUG [detached HEAD f6c0c85] merge master -Dorg -Ssuccess-only 2024-06-09 00:45:38,884 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-06-09 00:45:38,884 [ scc.merge] INFO Repository: ome/omero-plugins 2024-06-09 00:45:38,884 [ scc.merge] INFO Already up to date. 2024-06-09 00:45:38,884 [ scc.merge] INFO 2024-06-09 00:45:38,885 [ scc.merge] INFO Merged PRs: 2024-06-09 00:45:38,885 [ scc.merge] INFO - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' 2024-06-09 00:45:38,885 [ scc.merge] INFO 2024-06-09 00:45:38,885 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-06-09 00:45:38,885 [ scc.merge] INFO Already up to date. 2024-06-09 00:45:38,885 [ scc.merge] INFO 2024-06-09 00:45:38,885 [ scc.merge] INFO 2024-06-09 00:45:38,885 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-06-09 00:45:38,885 [ scc.merge] INFO Excluded PRs: 2024-06-09 00:45:38,885 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-06-09 00:45:38,885 [ scc.merge] INFO Already up to date. 2024-06-09 00:45:38,885 [ scc.merge] INFO 2024-06-09 00:45:38,885 [ scc.merge] INFO Merged PRs: 2024-06-09 00:45:38,885 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-06-09 00:45:38,885 [ scc.merge] INFO 2024-06-09 00:45:38,885 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-06-09 00:45:38,885 [ scc.merge] INFO Excluded PRs: 2024-06-09 00:45:38,885 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-06-09 00:45:38,885 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-06-09 00:45:38,885 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-06-09 00:45:38,885 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-06-09 00:45:38,885 [ scc.merge] INFO Already up to date. 2024-06-09 00:45:38,885 [ scc.merge] INFO 2024-06-09 00:45:38,885 [ scc.merge] INFO Merged PRs: 2024-06-09 00:45:38,885 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-06-09 00:45:38,886 [ scc.merge] INFO - PR 63 sbesson 'Remove python-future dependency' 2024-06-09 00:45:38,886 [ scc.merge] INFO - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-06-09 00:45:38,886 [ scc.merge] INFO 2024-06-09 00:45:38,886 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-06-09 00:45:38,886 [ scc.merge] INFO Excluded PRs: 2024-06-09 00:45:38,886 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-06-09 00:45:38,886 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-06-09 00:45:38,886 [ scc.merge] INFO Already up to date. 2024-06-09 00:45:38,886 [ scc.merge] INFO 2024-06-09 00:45:38,886 [ scc.merge] INFO Merged PRs: 2024-06-09 00:45:38,886 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-06-09 00:45:38,886 [ scc.merge] INFO 2024-06-09 00:45:38,886 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-09 00:45:38,886 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-06-09 00:45:38,886 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-06-09 00:45:38,886 [ scc.merge] INFO 2024-06-09 00:45:38,886 [ scc.merge] INFO Repository: ome/omero-figure 2024-06-09 00:45:38,886 [ scc.merge] INFO Excluded PRs: 2024-06-09 00:45:38,886 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' (exclude comment) 2024-06-09 00:45:38,886 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-06-09 00:45:38,886 [ scc.merge] INFO Already up to date. 2024-06-09 00:45:38,886 [ scc.merge] INFO 2024-06-09 00:45:38,886 [ scc.merge] INFO Merged PRs: 2024-06-09 00:45:38,886 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' 2024-06-09 00:45:38,886 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-06-09 00:45:38,887 [ scc.merge] INFO - PR 562 will-moore 'Add changelog 7.0.0' 2024-06-09 00:45:38,887 [ scc.merge] INFO - PR 563 will-moore 'Use path instead of re_path for all URLs' 2024-06-09 00:45:38,887 [ scc.merge] INFO 2024-06-09 00:45:38,887 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-06-09 00:45:38,887 [ scc.merge] INFO Already up to date. 2024-06-09 00:45:38,887 [ scc.merge] INFO 2024-06-09 00:45:38,887 [ scc.merge] INFO Merged PRs: 2024-06-09 00:45:38,887 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-06-09 00:45:38,887 [ scc.merge] INFO 2024-06-09 00:45:38,887 [ scc.merge] INFO Repository: ome/omero-gallery 2024-06-09 00:45:38,887 [ scc.merge] INFO Already up to date. 2024-06-09 00:45:38,887 [ scc.merge] INFO 2024-06-09 00:45:38,887 [ scc.merge] INFO Merged PRs: 2024-06-09 00:45:38,887 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-06-09 00:45:38,887 [ scc.merge] INFO 2024-06-09 00:45:38,887 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-06-09 00:45:38,887 [ scc.merge] INFO Excluded PRs: 2024-06-09 00:45:38,887 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-06-09 00:45:38,887 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-06-09 00:45:38,887 [ scc.merge] INFO Already up to date. 2024-06-09 00:45:38,887 [ scc.merge] INFO 2024-06-09 00:45:38,887 [ scc.merge] INFO Merged PRs: 2024-06-09 00:45:38,887 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-06-09 00:45:38,887 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-06-09 00:45:38,887 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-06-09 00:45:38,887 [ scc.merge] INFO 2024-06-09 00:45:38,888 [ scc.merge] INFO Repository: ome/omero-mapr 2024-06-09 00:45:38,888 [ scc.merge] INFO Excluded PRs: 2024-06-09 00:45:38,888 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-06-09 00:45:38,888 [ scc.merge] INFO Already up to date. 2024-06-09 00:45:38,888 [ scc.merge] INFO 2024-06-09 00:45:38,888 [ scc.merge] INFO Merged PRs: 2024-06-09 00:45:38,888 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-06-09 00:45:38,888 [ scc.merge] INFO 2024-06-09 00:45:38,888 [ scc.merge] INFO Repository: ome/omero-metadata 2024-06-09 00:45:38,888 [ scc.merge] INFO Already up to date. 2024-06-09 00:45:38,888 [ scc.merge] INFO 2024-06-09 00:45:38,888 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-09 00:45:38,888 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-06-09 00:45:38,888 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-06-09 00:45:38,888 [ scc.merge] INFO 2024-06-09 00:45:38,888 [ scc.merge] INFO Repository: ome/omero-parade 2024-06-09 00:45:38,888 [ scc.merge] INFO Excluded PRs: 2024-06-09 00:45:38,888 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-06-09 00:45:38,888 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-06-09 00:45:38,888 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-06-09 00:45:38,888 [ scc.merge] INFO Already up to date. 2024-06-09 00:45:38,888 [ scc.merge] INFO 2024-06-09 00:45:38,888 [ scc.merge] INFO Merged PRs: 2024-06-09 00:45:38,888 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-06-09 00:45:38,888 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-06-09 00:45:38,888 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-06-09 00:45:38,889 [ scc.merge] INFO 2024-06-09 00:45:38,889 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-06-09 00:45:38,889 [ scc.merge] INFO Already up to date. 2024-06-09 00:45:38,889 [ scc.merge] INFO 2024-06-09 00:45:38,889 [ scc.merge] INFO Merged PRs: 2024-06-09 00:45:38,889 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-06-09 00:45:38,889 [ scc.merge] INFO 2024-06-09 00:45:38,889 [ scc.merge] INFO Repository: ome/omero-rois 2024-06-09 00:45:38,889 [ scc.merge] INFO Excluded PRs: 2024-06-09 00:45:38,889 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-06-09 00:45:38,889 [ scc.merge] INFO Already up to date. 2024-06-09 00:45:38,889 [ scc.merge] INFO 2024-06-09 00:45:38,889 [ scc.merge] INFO Merged PRs: 2024-06-09 00:45:38,889 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-06-09 00:45:38,889 [ scc.merge] INFO 2024-06-09 00:45:38,889 [ scc.merge] INFO Repository: ome/omero-signup 2024-06-09 00:45:38,889 [ scc.merge] INFO Already up to date. 2024-06-09 00:45:38,889 [ scc.merge] INFO 2024-06-09 00:45:38,889 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-09 00:45:38,889 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-06-09 00:45:38,889 [ scc.merge] INFO 2024-06-09 00:45:38,889 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-06-09 00:45:38,889 [ scc.merge] INFO Already up to date. 2024-06-09 00:45:38,889 [ scc.merge] INFO 2024-06-09 00:45:38,889 [ scc.merge] INFO Merged PRs: 2024-06-09 00:45:38,890 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-06-09 00:45:38,890 [ scc.merge] INFO 2024-06-09 00:45:38,890 [ scc.merge] INFO Repository: ome/omero-upload 2024-06-09 00:45:38,890 [ scc.merge] INFO Already up to date. 2024-06-09 00:45:38,890 [ scc.merge] INFO 2024-06-09 00:45:38,890 [ scc.merge] INFO 2024-06-09 00:45:38,890 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-06-09 00:45:38,890 [ scc.merge] INFO Already up to date. 2024-06-09 00:45:38,890 [ scc.merge] INFO 2024-06-09 00:45:38,890 [ scc.merge] INFO 2024-06-09 00:45:38,890 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-06-09 00:45:38,890 [ scc.merge] INFO Excluded PRs: 2024-06-09 00:45:38,890 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-06-09 00:45:38,890 [ scc.merge] INFO Already up to date. 2024-06-09 00:45:38,890 [ scc.merge] INFO 2024-06-09 00:45:38,890 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-09 00:45:38,890 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-06-09 00:45:38,890 [ scc.merge] INFO 2024-06-09 00:45:38,890 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-06-09 00:45:38,890 [ scc.merge] INFO Already up to date. 2024-06-09 00:45:38,890 [ scc.merge] INFO 2024-06-09 00:45:38,890 [ scc.merge] INFO 2024-06-09 00:45:38,890 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-06-09 00:45:38,890 [ scc.merge] INFO Already up to date. 2024-06-09 00:45:38,890 [ scc.merge] INFO 2024-06-09 00:45:38,890 [ scc.merge] INFO 2024-06-09 00:45:38,891 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-06-09 00:45:38,891 [ scc.merge] INFO Already up to date. 2024-06-09 00:45:38,891 [ scc.merge] INFO 2024-06-09 00:45:38,891 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-09 00:45:38,891 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-06-09 00:45:38,891 [ scc.merge] INFO 2024-06-09 00:45:38,891 [ scc.merge] INFO Repository: ome/scripts 2024-06-09 00:45:38,891 [ scc.merge] INFO Excluded PRs: 2024-06-09 00:45:38,891 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-06-09 00:45:38,891 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-06-09 00:45:38,891 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-06-09 00:45:38,891 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-06-09 00:45:38,891 [ scc.merge] INFO Already up to date. 2024-06-09 00:45:38,891 [ scc.merge] INFO 2024-06-09 00:45:38,891 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-09 00:45:38,891 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-06-09 00:45:38,891 [ scc.merge] INFO 2024-06-09 00:45:38,891 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-06-09 00:45:38,891 [ scc.git] DEBUG Calling 'git remote' 2024-06-09 00:45:38,898 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-09 00:45:38,898 [ scc.git] DEBUG Calling 'git remote' 2024-06-09 00:45:38,903 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:38,903 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-09 00:45:38,904 [ scc.git] DEBUG Calling 'git remote' 2024-06-09 00:45:38,909 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:38,909 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-09 00:45:38,909 [ scc.git] DEBUG Calling 'git remote' 2024-06-09 00:45:38,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:38,915 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-09 00:45:38,915 [ scc.git] DEBUG Calling 'git remote' 2024-06-09 00:45:38,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:38,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-09 00:45:38,920 [ scc.git] DEBUG Calling 'git remote' 2024-06-09 00:45:38,925 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:38,925 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-09 00:45:38,925 [ scc.git] DEBUG Calling 'git remote' 2024-06-09 00:45:38,930 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:38,931 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-09 00:45:38,931 [ scc.git] DEBUG Calling 'git remote' 2024-06-09 00:45:38,936 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:38,936 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-09 00:45:38,936 [ scc.git] DEBUG Calling 'git remote' 2024-06-09 00:45:38,941 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:38,941 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-09 00:45:38,941 [ scc.git] DEBUG Calling 'git remote' 2024-06-09 00:45:38,946 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:38,946 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-09 00:45:38,947 [ scc.git] DEBUG Calling 'git remote' 2024-06-09 00:45:38,952 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:38,952 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-09 00:45:38,953 [ scc.git] DEBUG Calling 'git remote' 2024-06-09 00:45:38,958 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:38,958 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-09 00:45:38,958 [ scc.git] DEBUG Calling 'git remote' 2024-06-09 00:45:38,963 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:38,963 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-09 00:45:38,963 [ scc.git] DEBUG Calling 'git remote' 2024-06-09 00:45:38,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:38,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-09 00:45:38,969 [ scc.git] DEBUG Calling 'git remote' 2024-06-09 00:45:38,974 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:38,975 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-09 00:45:38,975 [ scc.git] DEBUG Calling 'git remote' 2024-06-09 00:45:38,980 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:38,980 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-09 00:45:38,981 [ scc.git] DEBUG Calling 'git remote' 2024-06-09 00:45:38,986 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:38,986 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-09 00:45:38,986 [ scc.git] DEBUG Calling 'git remote' 2024-06-09 00:45:38,990 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:38,991 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-09 00:45:38,991 [ scc.git] DEBUG Calling 'git remote' 2024-06-09 00:45:38,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:38,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-09 00:45:38,995 [ scc.git] DEBUG Calling 'git remote' 2024-06-09 00:45:39,002 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:39,003 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-09 00:45:39,003 [ scc.git] DEBUG Calling 'git remote' 2024-06-09 00:45:39,009 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:39,009 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-09 00:45:39,009 [ scc.git] DEBUG Calling 'git remote' 2024-06-09 00:45:39,015 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-09 00:45:39,015 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-09 00:45:39,015 [ scc.git] DEBUG Calling 'git remote' 2024-06-09 00:45:39,021 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD f2c9d2b] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 2ca566b Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 3d9e3b87 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7b7a637 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 5a90893 nothing to commit, working tree clean [detached HEAD a069559] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-09 00:46:26,301 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-09 00:46:35,408 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-09 00:46:37,782 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-09 00:46:42,429 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-09 00:47:28,689 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS