Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-07-13 00:33:00,189 [ scc.config] DEBUG Found github.token
2024-07-13 00:33:00,191 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-07-13 00:33:00,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:33:00,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:33:01,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-07-13 00:33:01,249 [ scc.gh] DEBUG 4391 remaining from 5000 (Reset at 00:07
2024-07-13 00:33:01,250 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-13 00:33:01,255 [ scc.git] DEBUG Check current status
2024-07-13 00:33:01,255 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-13 00:33:01,259 [ scc.git] DEBUG 2f19665 Merge pull request #286 from ome/dependabot/submodules/omero-py-2891df1
2024-07-13 00:33:01,259 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-13 00:33:01,321 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-07-13 00:33:01,324 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-07-13 00:33:01,328 [ scc.git] DEBUG 2891df1bfebe0e9878a0c9f7ff84509d5b7d7093 omero-py (v5.19.3-11-g2891df1b)
2024-07-13 00:33:01,331 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273)
2024-07-13 00:33:01,351 [ scc.git] DEBUG 5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7)
2024-07-13 00:33:01,356 [ scc.config] DEBUG Found remote.origin.url
2024-07-13 00:33:01,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-07-13 00:33:02,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-13 00:33:02,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-13 00:33:03,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-13 00:33:03,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-13 00:33:03,549 [ scc.git] DEBUG Resetting...
2024-07-13 00:33:03,549 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-07-13 00:33:03,555 [ scc.git] DEBUG HEAD is now at 2f19665 Merge pull request #286 from ome/dependabot/submodules/omero-py-2891df1
2024-07-13 00:33:03,556 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-07-13 00:33:03,613 [ scc.git] DEBUG Check current status
2024-07-13 00:33:03,614 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-13 00:33:03,619 [ scc.git] DEBUG 2f19665 Merge pull request #286 from ome/dependabot/submodules/omero-py-2891df1
2024-07-13 00:33:03,619 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-13 00:33:03,660 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-07-13 00:33:03,663 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-07-13 00:33:03,667 [ scc.git] DEBUG 2891df1bfebe0e9878a0c9f7ff84509d5b7d7093 omero-py (v5.19.3-11-g2891df1b)
2024-07-13 00:33:03,671 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273)
2024-07-13 00:33:03,674 [ scc.git] DEBUG 5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7)
2024-07-13 00:33:03,675 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-07-13 00:33:03,675 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-07-13 00:33:03,676 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-07-13 00:33:03,676 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-07-13 00:33:03,676 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-07-13 00:33:03,676 [ scc.repo] DEBUG ## PRs found:
2024-07-13 00:33:03,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-07-13 00:33:03,994 [ scc.repo] DEBUG ## Branches found:
2024-07-13 00:33:03,994 [ scc.git] DEBUG Get sha1 of %s
2024-07-13 00:33:03,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:33:03,998 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-13 00:33:04,002 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-13 00:33:04,002 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-13 00:33:04,006 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-13 00:33:04,010 [ scc.git] DEBUG Already up to date.
2024-07-13 00:33:04,010 [ scc.git] DEBUG ## Unique users: []
2024-07-13 00:33:04,010 [ scc.git] DEBUG Get sha1 of %s
2024-07-13 00:33:04,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:33:04,014 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-13 00:33:04,055 [ scc.git] DEBUG Get sha1 of %s
2024-07-13 00:33:04,055 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:33:04,059 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-13 00:33:04,256 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9bc9967d60> has no local changes
2024-07-13 00:33:04,256 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Generated by OMERO-python-superbuild-push#114 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/114/)'
2024-07-13 00:33:04,283 [ scc.git] DEBUG [detached HEAD ea201ae] merge master -Dorg -Snone
2024-07-13 00:33:04,284 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-07-13 00:33:04,284 [ scc.merge] INFO Already up to date.
2024-07-13 00:33:04,284 [ scc.merge] INFO
2024-07-13 00:33:04,284 [ scc.merge] INFO
2024-07-13 00:33:04,284 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-07-13 00:33:04,284 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-07-13 00:33:06,826 [ scc.config] DEBUG Found github.token
2024-07-13 00:33:06,829 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-07-13 00:33:07,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:33:07,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:33:07,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-07-13 00:33:07,848 [ scc.gh] DEBUG 4383 remaining from 5000 (Reset at 00:07
2024-07-13 00:33:07,849 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-13 00:33:07,853 [ scc.git] DEBUG Check current status
2024-07-13 00:33:07,854 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-13 00:33:07,859 [ scc.git] DEBUG ea201ae merge master -Dorg -Snone
2024-07-13 00:33:07,860 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-13 00:33:07,901 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-07-13 00:33:07,904 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-07-13 00:33:07,908 [ scc.git] DEBUG 2891df1bfebe0e9878a0c9f7ff84509d5b7d7093 omero-py (v5.19.3-11-g2891df1b)
2024-07-13 00:33:07,912 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273)
2024-07-13 00:33:07,916 [ scc.git] DEBUG 5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7)
2024-07-13 00:33:07,920 [ scc.config] DEBUG Found remote.origin.url
2024-07-13 00:33:07,920 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-07-13 00:33:07,922 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-07-13 00:33:08,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-07-13 00:33:08,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-13 00:33:09,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-13 00:33:09,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-13 00:33:10,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-13 00:33:10,111 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-13 00:33:10,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-07-13 00:33:10,165 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-13 00:33:10,168 [ scc.git] DEBUG Check current status
2024-07-13 00:33:10,169 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-13 00:33:10,173 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-07-13 00:33:10,173 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-13 00:33:10,217 [ scc.config] DEBUG Found remote.origin.url
2024-07-13 00:33:10,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-07-13 00:33:11,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-13 00:33:11,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-13 00:33:11,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-13 00:33:12,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-13 00:33:12,293 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-13 00:33:12,336 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-13 00:33:12,338 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-07-13 00:33:12,338 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-13 00:33:12,341 [ scc.git] DEBUG Check current status
2024-07-13 00:33:12,342 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-13 00:33:12,346 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-07-13 00:33:12,346 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-13 00:33:12,395 [ scc.config] DEBUG Found remote.origin.url
2024-07-13 00:33:12,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-07-13 00:33:13,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-13 00:33:13,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-13 00:33:14,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-13 00:33:14,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-13 00:33:14,566 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-13 00:33:14,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-13 00:33:14,614 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-07-13 00:33:14,614 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-13 00:33:14,620 [ scc.git] DEBUG Check current status
2024-07-13 00:33:14,620 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-13 00:33:14,644 [ scc.git] DEBUG 2891df1b Merge pull request #416 from sbesson/logging_config_parse
2024-07-13 00:33:14,645 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-13 00:33:14,689 [ scc.config] DEBUG Found remote.origin.url
2024-07-13 00:33:15,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-07-13 00:33:15,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-13 00:33:15,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-13 00:33:16,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-13 00:33:16,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-13 00:33:16,831 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-13 00:33:16,877 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-13 00:33:16,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-07-13 00:33:16,878 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-13 00:33:16,882 [ scc.git] DEBUG Check current status
2024-07-13 00:33:16,882 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-13 00:33:16,890 [ scc.git] DEBUG c20d273 Merge pull request #221 from imcf/fix-typechecking
2024-07-13 00:33:16,890 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-13 00:33:16,938 [ scc.config] DEBUG Found remote.origin.url
2024-07-13 00:33:16,939 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-07-13 00:33:17,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-07-13 00:33:17,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-13 00:33:18,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-13 00:33:18,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-13 00:33:19,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-13 00:33:19,107 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-13 00:33:19,146 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-13 00:33:19,147 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-07-13 00:33:19,147 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-13 00:33:19,151 [ scc.git] DEBUG Check current status
2024-07-13 00:33:19,151 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-13 00:33:19,168 [ scc.git] DEBUG 5a2cd79d7 Merge pull request #561 from jburel/numpy_less_than_2
2024-07-13 00:33:19,168 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-13 00:33:19,213 [ scc.config] DEBUG Found remote.origin.url
2024-07-13 00:33:19,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-07-13 00:33:20,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-13 00:33:20,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-13 00:33:20,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-13 00:33:21,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-13 00:33:21,387 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-13 00:33:21,432 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-13 00:33:21,432 [ scc.git] DEBUG Resetting...
2024-07-13 00:33:21,432 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-07-13 00:33:21,438 [ scc.git] DEBUG HEAD is now at ea201ae merge master -Dorg -Snone
2024-07-13 00:33:21,439 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-07-13 00:33:21,498 [ scc.git] DEBUG Check current status
2024-07-13 00:33:21,499 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-13 00:33:21,503 [ scc.git] DEBUG ea201ae merge master -Dorg -Snone
2024-07-13 00:33:21,504 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-13 00:33:21,549 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-07-13 00:33:21,552 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-07-13 00:33:21,555 [ scc.git] DEBUG 2891df1bfebe0e9878a0c9f7ff84509d5b7d7093 omero-py (v5.19.3-11-g2891df1b)
2024-07-13 00:33:21,559 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273)
2024-07-13 00:33:21,563 [ scc.git] DEBUG 5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7)
2024-07-13 00:33:21,564 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-07-13 00:33:21,564 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-07-13 00:33:21,564 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-07-13 00:33:21,564 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-07-13 00:33:21,564 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-07-13 00:33:21,564 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-07-13 00:33:21,564 [ scc.repo] DEBUG ## PRs found:
2024-07-13 00:33:21,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-07-13 00:33:21,834 [ scc.repo] DEBUG ## Branches found:
2024-07-13 00:33:21,834 [ scc.git] DEBUG Get sha1 of %s
2024-07-13 00:33:21,834 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:33:21,838 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-13 00:33:21,842 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-13 00:33:21,842 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-13 00:33:21,847 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-13 00:33:21,852 [ scc.git] DEBUG Already up to date.
2024-07-13 00:33:21,852 [ scc.git] DEBUG ## Unique users: []
2024-07-13 00:33:21,852 [ scc.git] DEBUG Get sha1 of %s
2024-07-13 00:33:21,852 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:33:21,857 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-13 00:33:21,902 [ scc.git] DEBUG Get sha1 of %s
2024-07-13 00:33:21,902 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:33:21,906 [ scc.repo] DEBUG ## PRs found:
2024-07-13 00:33:22,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-07-13 00:33:22,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-07-13 00:33:23,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-07-13 00:33:23,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-07-13 00:33:24,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-13 00:33:24,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-07-13 00:33:25,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-07-13 00:33:25,365 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-07-13 00:33:25,365 [ scc.repo] DEBUG ## Branches found:
2024-07-13 00:33:25,365 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-07-13 00:33:25,365 [ scc.git] DEBUG Get sha1 of %s
2024-07-13 00:33:25,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:33:25,372 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-13 00:33:25,376 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-13 00:33:25,377 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-13 00:33:25,381 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-13 00:33:25,386 [ scc.git] DEBUG Already up to date.
2024-07-13 00:33:25,386 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-07-13 00:33:25,731 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-07-13 00:33:25,731 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-07-13 00:33:25,736 [ scc.git] DEBUG ## Unique users: []
2024-07-13 00:33:25,736 [ scc.git] DEBUG Get sha1 of %s
2024-07-13 00:33:25,737 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:33:25,742 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-07-13 00:33:25,749 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:33:25,755 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-07-13 00:33:25,877 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-07-13 00:33:25,877 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-07-13 00:33:25,877 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-07-13 00:33:25,877 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-07-13 00:33:25,877 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-07-13 00:33:25,877 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-07-13 00:33:25,877 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-07-13 00:33:25,877 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-07-13 00:33:25,877 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-07-13 00:33:25,878 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-13 00:33:25,882 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-07-13 00:33:25,882 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-07-13 00:33:25,882 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-07-13 00:33:25,882 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-07-13 00:33:25,882 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-07-13 00:33:25,882 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-07-13 00:33:25,882 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-07-13 00:33:25,882 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-07-13 00:33:25,882 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-07-13 00:33:25,884 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-07-13 00:33:26,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:33:26,041 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-13 00:33:26,093 [ scc.git] DEBUG Get sha1 of %s
2024-07-13 00:33:26,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:33:26,100 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-13 00:33:26,149 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-13 00:33:26,156 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f00bec9a400> has no local changes
2024-07-13 00:33:26,157 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#114 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/114/)'
2024-07-13 00:33:26,165 [ scc.git] DEBUG [detached HEAD f2cce28] merge master -Dorg -Ssuccess-only
2024-07-13 00:33:26,166 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-13 00:33:26,166 [ scc.repo] DEBUG ## PRs found:
2024-07-13 00:33:26,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-07-13 00:33:27,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-07-13 00:33:27,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-07-13 00:33:28,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-07-13 00:33:28,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-13 00:33:29,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-07-13 00:33:29,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-07-13 00:33:29,551 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-07-13 00:33:30,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-07-13 00:33:30,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-07-13 00:33:30,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-07-13 00:33:31,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-07-13 00:33:31,445 [ scc.repo] DEBUG ## Branches found:
2024-07-13 00:33:31,445 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-07-13 00:33:31,445 [ scc.git] DEBUG Get sha1 of %s
2024-07-13 00:33:31,445 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:33:31,450 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-13 00:33:31,454 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-13 00:33:31,454 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-13 00:33:31,460 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-13 00:33:31,465 [ scc.git] DEBUG Already up to date.
2024-07-13 00:33:31,465 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-07-13 00:33:31,867 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-07-13 00:33:31,867 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-07-13 00:33:31,871 [ scc.git] DEBUG ## Unique users: []
2024-07-13 00:33:31,872 [ scc.git] DEBUG Get sha1 of %s
2024-07-13 00:33:31,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:33:31,876 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-07-13 00:33:31,882 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:33:31,887 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-07-13 00:33:31,897 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-07-13 00:33:31,898 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-13 00:33:31,901 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-07-13 00:33:31,901 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-07-13 00:33:31,901 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-07-13 00:33:32,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:33:32,069 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-13 00:33:32,111 [ scc.git] DEBUG Get sha1 of %s
2024-07-13 00:33:32,111 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:33:32,116 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-13 00:33:32,160 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-13 00:33:32,166 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f00bec9af70> has no local changes
2024-07-13 00:33:32,167 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#114 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/114/)'
2024-07-13 00:33:32,177 [ scc.git] DEBUG [detached HEAD 02b4813] merge master -Dorg -Ssuccess-only
2024-07-13 00:33:32,178 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-13 00:33:32,178 [ scc.repo] DEBUG ## PRs found:
2024-07-13 00:33:32,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-07-13 00:33:33,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-07-13 00:33:33,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-07-13 00:33:34,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-07-13 00:33:34,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-13 00:33:35,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-13 00:33:35,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-07-13 00:33:36,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-07-13 00:33:36,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-07-13 00:33:37,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-07-13 00:33:37,093 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-07-13 00:33:37,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-07-13 00:33:38,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-07-13 00:33:38,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-07-13 00:33:39,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-13 00:33:39,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-13 00:33:40,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-07-13 00:33:40,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-07-13 00:33:41,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-13 00:33:41,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-13 00:33:42,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-07-13 00:33:42,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-07-13 00:33:43,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-07-13 00:33:43,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-07-13 00:33:43,524 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-07-13 00:33:44,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-07-13 00:33:44,023 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-07-13 00:33:44,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-07-13 00:33:44,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-07-13 00:33:45,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-07-13 00:33:45,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-13 00:33:46,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-07-13 00:33:46,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-07-13 00:33:46,889 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-07-13 00:33:47,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-07-13 00:33:47,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-07-13 00:33:48,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-07-13 00:33:48,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-13 00:33:49,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-13 00:33:49,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-07-13 00:33:50,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-07-13 00:33:50,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-07-13 00:33:51,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-07-13 00:33:51,116 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-07-13 00:33:51,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-07-13 00:33:52,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-07-13 00:33:52,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-07-13 00:33:52,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-07-13 00:33:53,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-07-13 00:33:53,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-13 00:33:54,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-07-13 00:33:54,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-07-13 00:33:54,892 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-07-13 00:33:55,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-07-13 00:33:55,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-07-13 00:33:56,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-13 00:33:56,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-07-13 00:33:57,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-07-13 00:33:57,273 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-07-13 00:33:57,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-07-13 00:33:58,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-07-13 00:33:58,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-07-13 00:33:59,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-13 00:33:59,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-07-13 00:34:00,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-07-13 00:34:00,239 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-07-13 00:34:00,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-07-13 00:34:01,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-07-13 00:34:01,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-07-13 00:34:02,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-13 00:34:02,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-07-13 00:34:03,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-07-13 00:34:03,114 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-07-13 00:34:03,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-07-13 00:34:04,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-07-13 00:34:04,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-07-13 00:34:04,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-07-13 00:34:04,998 [ scc.repo] DEBUG ## Branches found:
2024-07-13 00:34:04,998 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-07-13 00:34:04,998 [ scc.git] DEBUG Get sha1 of %s
2024-07-13 00:34:04,998 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:34:05,003 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-13 00:34:05,008 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-13 00:34:05,008 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-13 00:34:05,016 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-13 00:34:05,023 [ scc.git] DEBUG Already up to date.
2024-07-13 00:34:05,023 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-07-13 00:34:05,518 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-13 00:34:05,518 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-07-13 00:34:05,523 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-07-13 00:34:05,952 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-13 00:34:05,952 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-07-13 00:34:05,958 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-07-13 00:34:06,375 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-13 00:34:06,375 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-07-13 00:34:06,380 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-07-13 00:34:06,769 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-13 00:34:06,769 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-07-13 00:34:06,774 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-07-13 00:34:07,208 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-13 00:34:07,209 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-07-13 00:34:07,214 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-07-13 00:34:07,600 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-13 00:34:07,600 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-07-13 00:34:07,606 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-07-13 00:34:07,964 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-13 00:34:07,965 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-07-13 00:34:07,970 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-07-13 00:34:08,319 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-13 00:34:08,319 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-07-13 00:34:08,326 [ scc.git] DEBUG ## Unique users: []
2024-07-13 00:34:08,326 [ scc.git] DEBUG Get sha1 of %s
2024-07-13 00:34:08,326 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:34:08,332 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-07-13 00:34:08,344 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:34:08,349 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-07-13 00:34:08,384 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-07-13 00:34:08,384 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-07-13 00:34:08,385 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-13 00:34:08,391 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-07-13 00:34:08,391 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-07-13 00:34:08,391 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-07-13 00:34:08,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:34:08,555 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-07-13 00:34:08,567 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:34:08,572 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-07-13 00:34:08,640 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-07-13 00:34:08,641 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-07-13 00:34:08,641 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-13 00:34:08,649 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-07-13 00:34:08,649 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-07-13 00:34:08,649 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-07-13 00:34:08,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:34:08,960 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-07-13 00:34:08,972 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:34:08,977 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-07-13 00:34:09,001 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-07-13 00:34:09,002 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-13 00:34:09,005 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-07-13 00:34:09,005 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-07-13 00:34:09,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:34:09,363 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-07-13 00:34:09,375 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:34:09,379 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-07-13 00:34:09,418 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-07-13 00:34:09,418 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-07-13 00:34:09,419 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-13 00:34:09,422 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-07-13 00:34:09,422 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-07-13 00:34:09,423 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-07-13 00:34:09,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:34:09,777 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-07-13 00:34:09,788 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:34:09,794 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-07-13 00:34:09,812 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-13 00:34:09,815 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-07-13 00:34:09,815 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-07-13 00:34:09,815 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-07-13 00:34:09,815 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-07-13 00:34:09,815 [ scc.git] DEBUG create mode 100644 connect.py
2024-07-13 00:34:10,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:34:10,211 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-07-13 00:34:10,223 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:34:10,227 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-07-13 00:34:10,294 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-07-13 00:34:10,295 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-13 00:34:10,298 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-07-13 00:34:10,298 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-07-13 00:34:10,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:34:10,626 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-07-13 00:34:10,638 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:34:10,644 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-07-13 00:34:10,684 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-07-13 00:34:10,685 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-13 00:34:10,689 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-07-13 00:34:10,690 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-07-13 00:34:11,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:34:11,044 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-07-13 00:34:11,056 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:34:11,061 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-07-13 00:34:11,125 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-07-13 00:34:11,127 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-13 00:34:11,139 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-07-13 00:34:11,139 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-07-13 00:34:11,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:34:11,464 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-13 00:34:11,509 [ scc.git] DEBUG Get sha1 of %s
2024-07-13 00:34:11,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:34:11,513 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-13 00:34:11,555 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-13 00:34:11,564 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f00bdbb9cd0> has no local changes
2024-07-13 00:34:11,565 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
Generated by OMERO-python-superbuild-push#114 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/114/)'
2024-07-13 00:34:11,576 [ scc.git] DEBUG [detached HEAD 99e44396] merge master -Dorg -Ssuccess-only
2024-07-13 00:34:11,577 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-13 00:34:11,577 [ scc.git] INFO Overriding base-branch from master to develop
2024-07-13 00:34:11,577 [ scc.repo] DEBUG ## PRs found:
2024-07-13 00:34:12,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-07-13 00:34:12,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-07-13 00:34:13,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-07-13 00:34:13,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-07-13 00:34:14,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-07-13 00:34:14,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-07-13 00:34:15,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-07-13 00:34:15,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-07-13 00:34:16,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-13 00:34:16,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-07-13 00:34:17,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-07-13 00:34:17,153 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-07-13 00:34:17,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-07-13 00:34:18,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-07-13 00:34:18,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-07-13 00:34:19,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-07-13 00:34:19,165 [ scc.repo] DEBUG ## Branches found:
2024-07-13 00:34:19,165 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-07-13 00:34:19,165 [ scc.git] DEBUG Get sha1 of %s
2024-07-13 00:34:19,165 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:34:19,170 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-07-13 00:34:19,175 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-13 00:34:19,175 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-07-13 00:34:19,181 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-07-13 00:34:19,187 [ scc.git] DEBUG Already up to date.
2024-07-13 00:34:19,187 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-07-13 00:34:19,702 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-07-13 00:34:19,702 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-07-13 00:34:19,708 [ scc.git] DEBUG ## Unique users: []
2024-07-13 00:34:19,708 [ scc.git] DEBUG Get sha1 of %s
2024-07-13 00:34:19,708 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:34:19,714 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-07-13 00:34:19,722 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:34:19,728 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-07-13 00:34:19,761 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-07-13 00:34:19,761 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-07-13 00:34:19,761 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-07-13 00:34:19,761 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-07-13 00:34:19,767 [ scc.git] DEBUG Calling 'git reset --hard c20d2734b711c659cecea83db6e2ebd7b7013636'
2024-07-13 00:34:19,773 [ scc.git] DEBUG HEAD is now at c20d273 Merge pull request #221 from imcf/fix-typechecking
2024-07-13 00:34:19,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:34:19,934 [ scc.git] DEBUG Calling 'git merge-base c20d2734b711c659cecea83db6e2ebd7b7013636 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-07-13 00:34:19,941 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..c20d2734b711c659cecea83db6e2ebd7b7013636'
2024-07-13 00:34:19,947 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#114](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/114/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/114/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-07-13 00:34:19,952 [ scc.config] DEBUG Found github.token
2024-07-13 00:34:19,952 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-07-13 00:34:19,952 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-13 00:34:19,995 [ scc.git] DEBUG Get sha1 of %s
2024-07-13 00:34:19,996 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:34:20,001 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-13 00:34:20,041 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-13 00:34:20,047 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f00bdbd1bb0> has no local changes
2024-07-13 00:34:20,048 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#114 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/114/)'
2024-07-13 00:34:20,056 [ scc.git] DEBUG [detached HEAD ab95af0] merge master -Dorg -Ssuccess-only
2024-07-13 00:34:20,056 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-13 00:34:20,057 [ scc.repo] DEBUG ## PRs found:
2024-07-13 00:34:20,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-07-13 00:34:21,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/564 HTTP/1.1" 200 None
2024-07-13 00:34:21,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/564/comments HTTP/1.1" 200 None
2024-07-13 00:34:22,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde HTTP/1.1" 200 None
2024-07-13 00:34:22,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-13 00:34:23,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-13 00:34:23,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde HTTP/1.1" 200 None
2024-07-13 00:34:24,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/091e5fc2d35212271ac71fd66b42c611299d6fde?per_page=1 HTTP/1.1" 200 None
2024-07-13 00:34:24,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde HTTP/1.1" 200 None
2024-07-13 00:34:25,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde/status HTTP/1.1" 200 None
2024-07-13 00:34:25,032 [ scc.repo] DEBUG - PR 564 knabar 'New table API endpoints for lower level table access'
2024-07-13 00:34:25,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/563 HTTP/1.1" 200 None
2024-07-13 00:34:25,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/563/comments HTTP/1.1" 200 None
2024-07-13 00:34:26,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7 HTTP/1.1" 200 None
2024-07-13 00:34:26,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-13 00:34:27,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-13 00:34:27,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7 HTTP/1.1" 200 None
2024-07-13 00:34:28,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/af88a0cd2aa7d15d9b0dca1ce369060284551de7?per_page=1 HTTP/1.1" 200 None
2024-07-13 00:34:29,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7 HTTP/1.1" 200 None
2024-07-13 00:34:29,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7/status HTTP/1.1" 200 None
2024-07-13 00:34:29,451 [ scc.repo] DEBUG - PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS'
2024-07-13 00:34:29,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/562 HTTP/1.1" 200 None
2024-07-13 00:34:30,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/560 HTTP/1.1" 200 None
2024-07-13 00:34:30,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/560/comments HTTP/1.1" 200 None
2024-07-13 00:34:31,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823 HTTP/1.1" 200 None
2024-07-13 00:34:31,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-13 00:34:32,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-13 00:34:32,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823 HTTP/1.1" 200 None
2024-07-13 00:34:33,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/f92a4e2764982ace46474a82af4ad25bee9d8823?per_page=1 HTTP/1.1" 200 None
2024-07-13 00:34:33,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823 HTTP/1.1" 200 None
2024-07-13 00:34:34,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823/status HTTP/1.1" 200 None
2024-07-13 00:34:34,273 [ scc.repo] DEBUG - PR 560 will-moore 'linkify supports urls that include $ character'
2024-07-13 00:34:34,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/558 HTTP/1.1" 200 None
2024-07-13 00:34:35,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/835cfbc948305ce221d873b2a8beb5be288ca9f8 HTTP/1.1" 200 None
2024-07-13 00:34:35,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/835cfbc948305ce221d873b2a8beb5be288ca9f8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-13 00:34:36,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/835cfbc948305ce221d873b2a8beb5be288ca9f8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-13 00:34:36,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/835cfbc948305ce221d873b2a8beb5be288ca9f8 HTTP/1.1" 200 None
2024-07-13 00:34:37,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/835cfbc948305ce221d873b2a8beb5be288ca9f8?per_page=1 HTTP/1.1" 200 None
2024-07-13 00:34:37,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/835cfbc948305ce221d873b2a8beb5be288ca9f8 HTTP/1.1" 200 None
2024-07-13 00:34:38,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/835cfbc948305ce221d873b2a8beb5be288ca9f8/status HTTP/1.1" 200 None
2024-07-13 00:34:38,059 [ scc.repo] DEBUG - PR 558 jburel 'Update readme'
2024-07-13 00:34:38,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555 HTTP/1.1" 200 None
2024-07-13 00:34:39,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555/comments HTTP/1.1" 200 None
2024-07-13 00:34:39,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None
2024-07-13 00:34:40,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-13 00:34:40,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-13 00:34:40,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None
2024-07-13 00:34:41,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/97e479b717e34179eceea2507d3e69a04b2fec1e?per_page=1 HTTP/1.1" 200 None
2024-07-13 00:34:41,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None
2024-07-13 00:34:42,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/status HTTP/1.1" 200 None
2024-07-13 00:34:42,338 [ scc.repo] DEBUG - PR 555 chris-allan 'Archive status'
2024-07-13 00:34:42,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/554 HTTP/1.1" 200 None
2024-07-13 00:34:43,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/554/comments HTTP/1.1" 200 None
2024-07-13 00:34:43,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/79c23056136bc929e4ebd57d24600780c92921c5 HTTP/1.1" 200 None
2024-07-13 00:34:44,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/79c23056136bc929e4ebd57d24600780c92921c5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-13 00:34:44,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/79c23056136bc929e4ebd57d24600780c92921c5/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-13 00:34:45,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/79c23056136bc929e4ebd57d24600780c92921c5 HTTP/1.1" 200 None
2024-07-13 00:34:45,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/79c23056136bc929e4ebd57d24600780c92921c5?per_page=1 HTTP/1.1" 200 None
2024-07-13 00:34:46,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/79c23056136bc929e4ebd57d24600780c92921c5 HTTP/1.1" 200 None
2024-07-13 00:34:46,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/79c23056136bc929e4ebd57d24600780c92921c5/status HTTP/1.1" 200 None
2024-07-13 00:34:46,631 [ scc.repo] DEBUG - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query'
2024-07-13 00:34:47,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-07-13 00:34:47,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-07-13 00:34:48,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-07-13 00:34:48,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-07-13 00:34:49,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-07-13 00:34:49,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-13 00:34:49,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-13 00:34:50,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-07-13 00:34:50,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-07-13 00:34:51,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-07-13 00:34:51,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-07-13 00:34:51,832 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-07-13 00:34:52,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-07-13 00:34:52,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-07-13 00:34:53,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-07-13 00:34:53,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-13 00:34:54,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-13 00:34:54,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-07-13 00:34:55,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-07-13 00:34:55,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-07-13 00:34:56,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-07-13 00:34:56,093 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-07-13 00:34:56,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-07-13 00:34:57,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-07-13 00:34:57,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-07-13 00:34:58,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-13 00:34:58,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-13 00:34:58,523 [ scc.repo] DEBUG ## Branches found:
2024-07-13 00:34:58,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-07-13 00:34:58,524 [ scc.git] DEBUG Get sha1 of %s
2024-07-13 00:34:58,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:34:58,529 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-13 00:34:58,533 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-13 00:34:58,534 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-13 00:34:58,547 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-13 00:34:58,553 [ scc.git] DEBUG Already up to date.
2024-07-13 00:34:58,554 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-07-13 00:34:59,203 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-13 00:34:59,203 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-07-13 00:34:59,209 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-07-13 00:34:59,591 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-13 00:34:59,591 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-07-13 00:34:59,596 [ scc.git] DEBUG Calling 'git fetch origin pull/554/head'
2024-07-13 00:35:00,469 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-13 00:35:00,470 [ scc.git] DEBUG * branch refs/pull/554/head -> FETCH_HEAD
2024-07-13 00:35:00,475 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head'
2024-07-13 00:35:01,279 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-13 00:35:01,280 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD
2024-07-13 00:35:01,290 [ scc.git] DEBUG Calling 'git fetch origin pull/558/head'
2024-07-13 00:35:01,854 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-13 00:35:01,855 [ scc.git] DEBUG * branch refs/pull/558/head -> FETCH_HEAD
2024-07-13 00:35:01,857 [ scc.git] DEBUG Calling 'git fetch origin pull/560/head'
2024-07-13 00:35:02,254 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-13 00:35:02,255 [ scc.git] DEBUG * branch refs/pull/560/head -> FETCH_HEAD
2024-07-13 00:35:02,260 [ scc.git] DEBUG Calling 'git fetch origin pull/563/head'
2024-07-13 00:35:02,631 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-13 00:35:02,631 [ scc.git] DEBUG * branch refs/pull/563/head -> FETCH_HEAD
2024-07-13 00:35:02,636 [ scc.git] DEBUG Calling 'git fetch origin pull/564/head'
2024-07-13 00:35:03,003 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-13 00:35:03,003 [ scc.git] DEBUG * branch refs/pull/564/head -> FETCH_HEAD
2024-07-13 00:35:03,008 [ scc.git] DEBUG ## Unique users: []
2024-07-13 00:35:03,008 [ scc.git] DEBUG Get sha1 of %s
2024-07-13 00:35:03,009 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:35:03,014 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-07-13 00:35:03,022 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:35:03,028 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-07-13 00:35:03,097 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-07-13 00:35:03,097 [ scc.git] DEBUG Auto-merging setup.py
2024-07-13 00:35:03,098 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-13 00:35:03,102 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-07-13 00:35:03,102 [ scc.git] DEBUG setup.py | 1 +
2024-07-13 00:35:03,102 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-07-13 00:35:03,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:35:03,266 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-07-13 00:35:03,278 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:35:03,289 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-07-13 00:35:03,361 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-07-13 00:35:03,361 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-07-13 00:35:03,362 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-13 00:35:03,366 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-07-13 00:35:03,366 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-07-13 00:35:03,366 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-07-13 00:35:03,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:35:03,717 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...79c23056136bc929e4ebd57d24600780c92921c5'
2024-07-13 00:35:03,724 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:35:03,730 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 554 (Optimize obj_id_bitmask by using its own query) 79c23056136bc929e4ebd57d24600780c92921c5'
2024-07-13 00:35:03,802 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-13 00:35:03,807 [ scc.git] DEBUG omeroweb/webgateway/views.py | 77 ++++++++++++++++++++++++++------------------
2024-07-13 00:35:03,807 [ scc.git] DEBUG test/unit/test_webgateway.py | 9 ++++--
2024-07-13 00:35:03,807 [ scc.git] DEBUG 2 files changed, 51 insertions(+), 35 deletions(-)
2024-07-13 00:35:04,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:35:04,136 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...97e479b717e34179eceea2507d3e69a04b2fec1e'
2024-07-13 00:35:04,144 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:35:04,148 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Archive status) 97e479b717e34179eceea2507d3e69a04b2fec1e'
2024-07-13 00:35:04,306 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-07-13 00:35:04,308 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-13 00:35:04,315 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.tree.js | 3 +++
2024-07-13 00:35:04,315 [ scc.git] DEBUG .../webclient/annotations/includes/core_metadata.html | 6 ++++++
2024-07-13 00:35:04,315 [ scc.git] DEBUG omeroweb/webclient/tree.py | 10 ++++++++--
2024-07-13 00:35:04,315 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 1 +
2024-07-13 00:35:04,315 [ scc.git] DEBUG 4 files changed, 18 insertions(+), 2 deletions(-)
2024-07-13 00:35:04,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:35:04,542 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...835cfbc948305ce221d873b2a8beb5be288ca9f8'
2024-07-13 00:35:04,551 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:35:04,557 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 558 (Update readme) 835cfbc948305ce221d873b2a8beb5be288ca9f8'
2024-07-13 00:35:04,578 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-13 00:35:04,581 [ scc.git] DEBUG README.rst | 42 +++++++++++++++++++++---------------------
2024-07-13 00:35:04,581 [ scc.git] DEBUG 1 file changed, 21 insertions(+), 21 deletions(-)
2024-07-13 00:35:04,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:35:04,938 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f92a4e2764982ace46474a82af4ad25bee9d8823'
2024-07-13 00:35:04,947 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:35:04,953 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 560 (linkify supports urls that include $ character) f92a4e2764982ace46474a82af4ad25bee9d8823'
2024-07-13 00:35:04,993 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-13 00:35:04,997 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +-
2024-07-13 00:35:04,997 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-07-13 00:35:05,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:35:05,364 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...af88a0cd2aa7d15d9b0dca1ce369060284551de7'
2024-07-13 00:35:05,374 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:35:05,379 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 563 (Batch by MAX_TABLE_DOWNLOAD_ROWS) af88a0cd2aa7d15d9b0dca1ce369060284551de7'
2024-07-13 00:35:05,469 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2024-07-13 00:35:05,471 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-13 00:35:05,475 [ scc.git] DEBUG omeroweb/webgateway/views.py | 2 +-
2024-07-13 00:35:05,476 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-07-13 00:35:05,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:35:05,770 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...091e5fc2d35212271ac71fd66b42c611299d6fde'
2024-07-13 00:35:05,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:35:05,783 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 564 (New table API endpoints for lower level table access) 091e5fc2d35212271ac71fd66b42c611299d6fde'
2024-07-13 00:35:05,841 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-07-13 00:35:05,841 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2024-07-13 00:35:05,842 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-13 00:35:05,847 [ scc.git] DEBUG omeroweb/settings.py | 7 ++
2024-07-13 00:35:05,847 [ scc.git] DEBUG omeroweb/webgateway/urls.py | 29 +++++++
2024-07-13 00:35:05,847 [ scc.git] DEBUG omeroweb/webgateway/views.py | 175 ++++++++++++++++++++++++++++++++++++++++++-
2024-07-13 00:35:05,848 [ scc.git] DEBUG 3 files changed, 210 insertions(+), 1 deletion(-)
2024-07-13 00:35:06,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:35:06,192 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-13 00:35:06,234 [ scc.git] DEBUG Get sha1 of %s
2024-07-13 00:35:06,234 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-13 00:35:06,238 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-13 00:35:06,279 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-13 00:35:06,290 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f00bc3214f0> has no local changes
2024-07-13 00:35:06,290 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 562 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query'
- PR 555 chris-allan 'Archive status'
- PR 558 jburel 'Update readme'
- PR 560 will-moore 'linkify supports urls that include $ character'
- PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS'
- PR 564 knabar 'New table API endpoints for lower level table access'
Generated by OMERO-python-superbuild-push#114 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/114/)'
2024-07-13 00:35:06,305 [ scc.git] DEBUG [detached HEAD f8fc7803d] merge master -Dorg -Ssuccess-only
2024-07-13 00:35:06,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-13 00:35:06,306 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-13 00:35:06,358 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-07-13 00:35:06,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:35:06,607 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-07-13 00:35:06,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:35:07,009 [ scc.config] DEBUG Found submodule.omero-py.url
2024-07-13 00:35:07,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:35:07,423 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-07-13 00:35:07,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:35:07,831 [ scc.config] DEBUG Found submodule.omero-web.url
2024-07-13 00:35:08,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-13 00:35:08,261 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-13 00:35:08,290 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f00bec8ed60> has local changes
2024-07-13 00:35:08,290 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 562 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query'
- PR 555 chris-allan 'Archive status'
- PR 558 jburel 'Update readme'
- PR 560 will-moore 'linkify supports urls that include $ character'
- PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS'
- PR 564 knabar 'New table API endpoints for lower level table access'
Generated by OMERO-python-superbuild-push#114 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/114/)'
2024-07-13 00:35:08,299 [ scc.git] DEBUG [detached HEAD fd71809] merge master -Dorg -Ssuccess-only
2024-07-13 00:35:08,300 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-07-13 00:35:08,300 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-07-13 00:35:08,300 [ scc.merge] INFO Already up to date.
2024-07-13 00:35:08,300 [ scc.merge] INFO
2024-07-13 00:35:08,300 [ scc.merge] INFO
2024-07-13 00:35:08,300 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-07-13 00:35:08,300 [ scc.merge] INFO Already up to date.
2024-07-13 00:35:08,300 [ scc.merge] INFO
2024-07-13 00:35:08,300 [ scc.merge] INFO Merged PRs:
2024-07-13 00:35:08,300 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-07-13 00:35:08,300 [ scc.merge] INFO
2024-07-13 00:35:08,300 [ scc.merge] INFO Repository: ome/omero-marshal
2024-07-13 00:35:08,300 [ scc.merge] INFO Excluded PRs:
2024-07-13 00:35:08,300 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-07-13 00:35:08,300 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-07-13 00:35:08,300 [ scc.merge] INFO Already up to date.
2024-07-13 00:35:08,300 [ scc.merge] INFO
2024-07-13 00:35:08,300 [ scc.merge] INFO Merged PRs:
2024-07-13 00:35:08,300 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-07-13 00:35:08,300 [ scc.merge] INFO
2024-07-13 00:35:08,300 [ scc.merge] INFO Repository: ome/omero-py
2024-07-13 00:35:08,301 [ scc.merge] INFO Excluded PRs:
2024-07-13 00:35:08,301 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-07-13 00:35:08,301 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-07-13 00:35:08,301 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-07-13 00:35:08,301 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-07-13 00:35:08,301 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-07-13 00:35:08,301 [ scc.merge] INFO Already up to date.
2024-07-13 00:35:08,301 [ scc.merge] INFO
2024-07-13 00:35:08,301 [ scc.merge] INFO Merged PRs:
2024-07-13 00:35:08,301 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-07-13 00:35:08,301 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-07-13 00:35:08,301 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-07-13 00:35:08,301 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-07-13 00:35:08,301 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-07-13 00:35:08,301 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-07-13 00:35:08,301 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-07-13 00:35:08,301 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-07-13 00:35:08,301 [ scc.merge] INFO
2024-07-13 00:35:08,301 [ scc.merge] INFO Repository: ome/omero-scripts
2024-07-13 00:35:08,301 [ scc.merge] INFO Excluded PRs:
2024-07-13 00:35:08,301 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-07-13 00:35:08,301 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-07-13 00:35:08,301 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-07-13 00:35:08,301 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-07-13 00:35:08,301 [ scc.merge] INFO Already up to date.
2024-07-13 00:35:08,301 [ scc.merge] INFO
2024-07-13 00:35:08,301 [ scc.merge] INFO Conflicting PRs (not included):
2024-07-13 00:35:08,301 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-07-13 00:35:08,301 [ scc.merge] INFO
2024-07-13 00:35:08,301 [ scc.merge] INFO Repository: ome/omero-web
2024-07-13 00:35:08,301 [ scc.merge] INFO Excluded PRs:
2024-07-13 00:35:08,301 [ scc.merge] INFO - PR 562 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-07-13 00:35:08,301 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-07-13 00:35:08,301 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-07-13 00:35:08,301 [ scc.merge] INFO Already up to date.
2024-07-13 00:35:08,301 [ scc.merge] INFO
2024-07-13 00:35:08,301 [ scc.merge] INFO Merged PRs:
2024-07-13 00:35:08,301 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-07-13 00:35:08,302 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-07-13 00:35:08,302 [ scc.merge] INFO - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query'
2024-07-13 00:35:08,302 [ scc.merge] INFO - PR 555 chris-allan 'Archive status'
2024-07-13 00:35:08,302 [ scc.merge] INFO - PR 558 jburel 'Update readme'
2024-07-13 00:35:08,302 [ scc.merge] INFO - PR 560 will-moore 'linkify supports urls that include $ character'
2024-07-13 00:35:08,302 [ scc.merge] INFO - PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS'
2024-07-13 00:35:08,302 [ scc.merge] INFO - PR 564 knabar 'New table API endpoints for lower level table access'
2024-07-13 00:35:08,302 [ scc.merge] INFO
2024-07-13 00:35:08,302 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-07-13 00:35:08,302 [ scc.git] DEBUG Calling 'git remote'
2024-07-13 00:35:08,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-07-13 00:35:08,306 [ scc.git] DEBUG Calling 'git remote'
2024-07-13 00:35:08,310 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-13 00:35:08,310 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-07-13 00:35:08,310 [ scc.git] DEBUG Calling 'git remote'
2024-07-13 00:35:08,314 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-13 00:35:08,314 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-07-13 00:35:08,314 [ scc.git] DEBUG Calling 'git remote'
2024-07-13 00:35:08,318 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-13 00:35:08,318 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-07-13 00:35:08,318 [ scc.git] DEBUG Calling 'git remote'
2024-07-13 00:35:08,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-13 00:35:08,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-07-13 00:35:08,322 [ scc.git] DEBUG Calling 'git remote'
2024-07-13 00:35:08,326 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
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Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
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Entering 'omero-scripts'
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Entering 'omero-marshal'
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2024-07-13 00:35:39,665 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
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