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Started by upstream project "Trigger" build number 137
originally caused by:
 Started by timer
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
 > git --version # timeout=10
 > git --version # 'git version 2.39.2'
 > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf
The recommended git tool is: NONE
No credentials specified
 > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
 > git --version # timeout=10
 > git --version # 'git version 2.39.2'
 > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
Commit message: "Merge pull request #17 from jburel/python3"
 > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
Checking out Revision 2f19665dce4c396f493e20ccce802e3fce77082e (refs/remotes/origin/master)
 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10
 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git
 > git --version # timeout=10
 > git --version # 'git version 2.39.3'
 > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 2f19665dce4c396f493e20ccce802e3fce77082e # timeout=10
Commit message: "Merge pull request #286 from ome/dependabot/submodules/omero-py-2891df1"
 > git rev-list --no-walk 2f19665dce4c396f493e20ccce802e3fce77082e # timeout=10
Cleaning workspace
 > git rev-parse --verify HEAD # timeout=10
Resetting working tree
 > git reset --hard # timeout=10
 > git clean -fdx # timeout=10
 > git submodule foreach --recursive git reset --hard # timeout=10
 > git submodule foreach --recursive git clean -fdx # timeout=10
 > git remote # timeout=10
 > git submodule init # timeout=10
 > git submodule sync # timeout=10
 > git config --get remote.origin.url # timeout=10
 > git submodule init # timeout=10
 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
 > git config --get submodule.omero-py.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10
 > git config --get submodule.omero-web.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10
 > git config --get submodule.omero-marshal.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10
 > git config --get submodule.omero-dropbox.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10
 > git config --get submodule.omero-scripts.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10
 > git submodule update --init --recursive omero-py # timeout=10
[Pipeline] pwd
[Pipeline] copyArtifacts
Copied 1 artifact from "OMERO-build-push" build number 119
[Pipeline] sh
 > git submodule update --init --recursive omero-web # timeout=10
 > git submodule update --init --recursive omero-marshal # timeout=10
 > git submodule update --init --recursive omero-dropbox # timeout=10
 > git submodule update --init --recursive omero-scripts # timeout=10
+ pushd build
~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
+ popd
~/workspace/OMERO-python-superbuild-push
+ python3 -m venv build/venv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ python3 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3)
Collecting pip
  Using cached pip-24.1.2-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
  Attempting uninstall: pip
    Found existing installation: pip 21.2.3
    Uninstalling pip-21.2.3:
      Successfully uninstalled pip-21.2.3
Successfully installed pip-24.1.2
+ python3 -m pip install scc
Collecting scc
  Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
  Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB)
Collecting PyYAML>=5.1 (from scc)
  Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
Collecting future (from scc)
  Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
  Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB)
Collecting ruamel.yaml.jinja2 (from scc)
  Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
  Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB)
Collecting urllib3<2 (from scc)
  Using cached urllib3-1.26.19-py2.py3-none-any.whl.metadata (49 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
  Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
  Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
  Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
  Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB)
Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc)
  Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB)
Collecting Deprecated (from PyGithub>=1.54->scc)
  Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
  Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
  Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB)
Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc)
  Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB)
Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached certifi-2024.7.4-py3-none-any.whl.metadata (2.2 kB)
Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc)
  Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB)
Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc)
  Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB)
Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB)
Using cached urllib3-1.26.19-py2.py3-none-any.whl (143 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.16.0-py2.py3-none-any.whl (11 kB)
Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB)
Using cached requests-2.32.3-py3-none-any.whl (64 kB)
Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB)
Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB)
Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB)
Using cached certifi-2024.7.4-py3-none-any.whl (162 kB)
Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB)
Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB)
Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl (3.9 MB)
Using cached idna-3.7-py3-none-any.whl (66 kB)
Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB)
Using cached pycparser-2.22-py3-none-any.whl (117 kB)
Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.7.4 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.8 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.19 wrapt-1.16.0 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-07-14 00:32:42,624 [  scc.config] DEBUG Found github.token
2024-07-14 00:32:42,627 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-07-14 00:32:42,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:32:43,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:32:43,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-07-14 00:32:43,653 [      scc.gh] DEBUG 4998 remaining from 5000 (Reset at 01:07
2024-07-14 00:32:43,654 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-14 00:32:43,658 [     scc.git] DEBUG Check current status
2024-07-14 00:32:43,658 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-14 00:32:43,662 [     scc.git] DEBUG 2f19665 Merge pull request #286 from ome/dependabot/submodules/omero-py-2891df1
2024-07-14 00:32:43,663 [     scc.git] DEBUG Calling 'git submodule status'
2024-07-14 00:32:43,709 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-07-14 00:32:43,712 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-07-14 00:32:43,804 [     scc.git] DEBUG  2891df1bfebe0e9878a0c9f7ff84509d5b7d7093 omero-py (v5.19.3-11-g2891df1b)
2024-07-14 00:32:43,808 [     scc.git] DEBUG  c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273)
2024-07-14 00:32:43,856 [     scc.git] DEBUG  5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7)
2024-07-14 00:32:43,862 [  scc.config] DEBUG Found remote.origin.url
2024-07-14 00:32:44,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-07-14 00:32:44,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-14 00:32:45,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-14 00:32:45,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-14 00:32:45,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-14 00:32:45,837 [     scc.git] DEBUG Resetting...
2024-07-14 00:32:45,837 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-07-14 00:32:45,843 [     scc.git] DEBUG HEAD is now at 2f19665 Merge pull request #286 from ome/dependabot/submodules/omero-py-2891df1
2024-07-14 00:32:45,843 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-07-14 00:32:45,903 [     scc.git] DEBUG Check current status
2024-07-14 00:32:45,903 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-14 00:32:45,908 [     scc.git] DEBUG 2f19665 Merge pull request #286 from ome/dependabot/submodules/omero-py-2891df1
2024-07-14 00:32:45,908 [     scc.git] DEBUG Calling 'git submodule status'
2024-07-14 00:32:45,955 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-07-14 00:32:45,958 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-07-14 00:32:45,962 [     scc.git] DEBUG  2891df1bfebe0e9878a0c9f7ff84509d5b7d7093 omero-py (v5.19.3-11-g2891df1b)
2024-07-14 00:32:45,967 [     scc.git] DEBUG  c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273)
2024-07-14 00:32:45,971 [     scc.git] DEBUG  5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7)
2024-07-14 00:32:45,972 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-07-14 00:32:45,972 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-07-14 00:32:45,972 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-07-14 00:32:45,972 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-07-14 00:32:45,972 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-07-14 00:32:45,972 [    scc.repo] DEBUG ## PRs found:
2024-07-14 00:32:46,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-07-14 00:32:46,258 [    scc.repo] DEBUG ## Branches found:
2024-07-14 00:32:46,258 [     scc.git] DEBUG Get sha1 of %s
2024-07-14 00:32:46,258 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:32:46,262 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-14 00:32:46,266 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-14 00:32:46,267 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-14 00:32:46,271 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-14 00:32:46,276 [     scc.git] DEBUG Already up to date.

2024-07-14 00:32:46,276 [     scc.git] DEBUG ## Unique users: []
2024-07-14 00:32:46,276 [     scc.git] DEBUG Get sha1 of %s
2024-07-14 00:32:46,276 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:32:46,281 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-14 00:32:46,325 [     scc.git] DEBUG Get sha1 of %s
2024-07-14 00:32:46,325 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:32:46,330 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-14 00:32:46,533 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fd1073eda00> has no local changes
2024-07-14 00:32:46,533 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-python-superbuild
Already up to date.


Generated by OMERO-python-superbuild-push#115 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/115/)'
2024-07-14 00:32:46,563 [     scc.git] DEBUG [detached HEAD bbab7e2] merge master -Dorg -Snone
2024-07-14 00:32:46,563 [   scc.merge] INFO  Repository: ome/omero-python-superbuild
2024-07-14 00:32:46,563 [   scc.merge] INFO  Already up to date.
2024-07-14 00:32:46,563 [   scc.merge] INFO  
2024-07-14 00:32:46,563 [   scc.merge] INFO  
2024-07-14 00:32:46,563 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-07-14 00:32:46,564 [     scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master

submodules:
  omero-scripts:
    base-branch: develop
2024-07-14 00:32:49,127 [  scc.config] DEBUG Found github.token
2024-07-14 00:32:49,129 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-07-14 00:32:49,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:32:49,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:32:50,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-07-14 00:32:50,141 [      scc.gh] DEBUG 4990 remaining from 5000 (Reset at 01:07
2024-07-14 00:32:50,142 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-14 00:32:50,147 [     scc.git] DEBUG Check current status
2024-07-14 00:32:50,148 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-14 00:32:50,151 [     scc.git] DEBUG bbab7e2 merge master -Dorg -Snone
2024-07-14 00:32:50,151 [     scc.git] DEBUG Calling 'git submodule status'
2024-07-14 00:32:50,188 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-07-14 00:32:50,191 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-07-14 00:32:50,195 [     scc.git] DEBUG  2891df1bfebe0e9878a0c9f7ff84509d5b7d7093 omero-py (v5.19.3-11-g2891df1b)
2024-07-14 00:32:50,198 [     scc.git] DEBUG  c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273)
2024-07-14 00:32:50,201 [     scc.git] DEBUG  5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7)
2024-07-14 00:32:50,205 [  scc.config] DEBUG Found remote.origin.url
2024-07-14 00:32:50,206 [     scc.git] DEBUG Reading repository configuration from repositories.yml
2024-07-14 00:32:50,207 [     scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
  omero-scripts:
    base-branch: develop

2024-07-14 00:32:50,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-07-14 00:32:51,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-14 00:32:51,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-14 00:32:51,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-14 00:32:52,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-14 00:32:52,377 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-14 00:32:52,439 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-07-14 00:32:52,439 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-14 00:32:52,445 [     scc.git] DEBUG Check current status
2024-07-14 00:32:52,445 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-14 00:32:52,450 [     scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-07-14 00:32:52,450 [     scc.git] DEBUG Calling 'git submodule status'
2024-07-14 00:32:52,498 [  scc.config] DEBUG Found remote.origin.url
2024-07-14 00:32:52,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-07-14 00:32:53,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-14 00:32:53,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-14 00:32:54,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-14 00:32:54,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-14 00:32:54,618 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-14 00:32:54,661 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-14 00:32:54,662 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-07-14 00:32:54,662 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-14 00:32:54,667 [     scc.git] DEBUG Check current status
2024-07-14 00:32:54,667 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-14 00:32:54,672 [     scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-07-14 00:32:54,673 [     scc.git] DEBUG Calling 'git submodule status'
2024-07-14 00:32:54,720 [  scc.config] DEBUG Found remote.origin.url
2024-07-14 00:32:55,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-07-14 00:32:55,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-14 00:32:56,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-14 00:32:56,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-14 00:32:56,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-14 00:32:56,904 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-14 00:32:56,963 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-14 00:32:56,964 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-07-14 00:32:56,964 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-14 00:32:56,969 [     scc.git] DEBUG Check current status
2024-07-14 00:32:56,969 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-14 00:32:56,978 [     scc.git] DEBUG 2891df1b Merge pull request #416 from sbesson/logging_config_parse
2024-07-14 00:32:56,978 [     scc.git] DEBUG Calling 'git submodule status'
2024-07-14 00:32:57,026 [  scc.config] DEBUG Found remote.origin.url
2024-07-14 00:32:57,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-07-14 00:32:57,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-14 00:32:58,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-14 00:32:58,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-14 00:32:59,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-14 00:32:59,166 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-14 00:32:59,208 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-14 00:32:59,210 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-07-14 00:32:59,210 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-14 00:32:59,216 [     scc.git] DEBUG Check current status
2024-07-14 00:32:59,216 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-14 00:32:59,231 [     scc.git] DEBUG c20d273 Merge pull request #221 from imcf/fix-typechecking
2024-07-14 00:32:59,231 [     scc.git] DEBUG Calling 'git submodule status'
2024-07-14 00:32:59,277 [  scc.config] DEBUG Found remote.origin.url
2024-07-14 00:32:59,278 [     scc.git] DEBUG Repository configuration:
base-branch: develop

2024-07-14 00:32:59,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-07-14 00:33:00,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-14 00:33:00,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-14 00:33:00,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-14 00:33:01,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-14 00:33:01,430 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-14 00:33:01,477 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-14 00:33:01,478 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-07-14 00:33:01,478 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-14 00:33:01,483 [     scc.git] DEBUG Check current status
2024-07-14 00:33:01,483 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-14 00:33:01,488 [     scc.git] DEBUG 5a2cd79d7 Merge pull request #561 from jburel/numpy_less_than_2
2024-07-14 00:33:01,488 [     scc.git] DEBUG Calling 'git submodule status'
2024-07-14 00:33:01,536 [  scc.config] DEBUG Found remote.origin.url
2024-07-14 00:33:01,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-07-14 00:33:02,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-14 00:33:02,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-14 00:33:03,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-14 00:33:03,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-14 00:33:03,622 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-14 00:33:03,677 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-14 00:33:03,678 [     scc.git] DEBUG Resetting...
2024-07-14 00:33:03,678 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-07-14 00:33:03,686 [     scc.git] DEBUG HEAD is now at bbab7e2 merge master -Dorg -Snone
2024-07-14 00:33:03,686 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-07-14 00:33:03,756 [     scc.git] DEBUG Check current status
2024-07-14 00:33:03,756 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-14 00:33:03,763 [     scc.git] DEBUG bbab7e2 merge master -Dorg -Snone
2024-07-14 00:33:03,763 [     scc.git] DEBUG Calling 'git submodule status'
2024-07-14 00:33:03,814 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-07-14 00:33:03,818 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-07-14 00:33:03,822 [     scc.git] DEBUG  2891df1bfebe0e9878a0c9f7ff84509d5b7d7093 omero-py (v5.19.3-11-g2891df1b)
2024-07-14 00:33:03,827 [     scc.git] DEBUG  c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273)
2024-07-14 00:33:03,831 [     scc.git] DEBUG  5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7)
2024-07-14 00:33:03,832 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-07-14 00:33:03,832 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-07-14 00:33:03,832 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-07-14 00:33:03,832 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-07-14 00:33:03,832 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-07-14 00:33:03,832 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2024-07-14 00:33:03,832 [    scc.repo] DEBUG ## PRs found:
2024-07-14 00:33:04,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-07-14 00:33:04,067 [    scc.repo] DEBUG ## Branches found:
2024-07-14 00:33:04,067 [     scc.git] DEBUG Get sha1 of %s
2024-07-14 00:33:04,067 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:33:04,073 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-14 00:33:04,079 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-14 00:33:04,079 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-14 00:33:04,086 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-14 00:33:04,093 [     scc.git] DEBUG Already up to date.

2024-07-14 00:33:04,094 [     scc.git] DEBUG ## Unique users: []
2024-07-14 00:33:04,094 [     scc.git] DEBUG Get sha1 of %s
2024-07-14 00:33:04,094 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:33:04,100 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-14 00:33:04,151 [     scc.git] DEBUG Get sha1 of %s
2024-07-14 00:33:04,151 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:33:04,156 [    scc.repo] DEBUG ## PRs found:
2024-07-14 00:33:04,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-07-14 00:33:04,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-07-14 00:33:05,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-07-14 00:33:06,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-07-14 00:33:06,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-14 00:33:06,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-07-14 00:33:07,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-07-14 00:33:07,327 [    scc.repo] DEBUG   - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-07-14 00:33:07,327 [    scc.repo] DEBUG ## Branches found:
2024-07-14 00:33:07,327 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-07-14 00:33:07,327 [     scc.git] DEBUG Get sha1 of %s
2024-07-14 00:33:07,327 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:33:07,334 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-14 00:33:07,341 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-14 00:33:07,342 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-14 00:33:07,349 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-14 00:33:07,357 [     scc.git] DEBUG Already up to date.

2024-07-14 00:33:07,357 [     scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-07-14 00:33:07,741 [     scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-07-14 00:33:07,741 [     scc.git] DEBUG  * branch            refs/pull/16/head -> FETCH_HEAD
2024-07-14 00:33:07,746 [     scc.git] DEBUG ## Unique users: []
2024-07-14 00:33:07,746 [     scc.git] DEBUG Get sha1 of %s
2024-07-14 00:33:07,746 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:33:07,752 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-07-14 00:33:07,760 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:33:07,766 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-07-14 00:33:07,882 [     scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-07-14 00:33:07,882 [     scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-07-14 00:33:07,882 [     scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-07-14 00:33:07,882 [     scc.git] DEBUG Auto-merging src/fsLists.py
2024-07-14 00:33:07,882 [     scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-07-14 00:33:07,882 [     scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-07-14 00:33:07,882 [     scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-07-14 00:33:07,882 [     scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-07-14 00:33:07,882 [     scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-07-14 00:33:07,883 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-14 00:33:07,888 [     scc.git] DEBUG  src/fsAbstractPlatformMonitor.py |  6 +++---
2024-07-14 00:33:07,888 [     scc.git] DEBUG  src/fsDirectory.py               | 46 ++++++++++++++++++++--------------------
2024-07-14 00:33:07,888 [     scc.git] DEBUG  src/fsDropBox.py                 | 24 ++++++++++-----------
2024-07-14 00:33:07,888 [     scc.git] DEBUG  src/fsLists.py                   | 14 ++++++------
2024-07-14 00:33:07,888 [     scc.git] DEBUG  src/fsMac-10-5-Monitor.py        | 10 ++++-----
2024-07-14 00:33:07,888 [     scc.git] DEBUG  src/fsMonitor.py                 | 24 ++++++++++-----------
2024-07-14 00:33:07,888 [     scc.git] DEBUG  src/fsMonitorServer.py           | 10 ++++-----
2024-07-14 00:33:07,888 [     scc.git] DEBUG  src/fsPyinotifyMonitor.py        |  8 +++----
2024-07-14 00:33:07,888 [     scc.git] DEBUG  src/fsWin-XP-Monitor.py          | 20 ++++++++---------
2024-07-14 00:33:07,888 [     scc.git] DEBUG  9 files changed, 81 insertions(+), 81 deletions(-)
2024-07-14 00:33:08,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:33:08,057 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-14 00:33:08,097 [     scc.git] DEBUG Get sha1 of %s
2024-07-14 00:33:08,097 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:33:08,101 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-14 00:33:08,139 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-14 00:33:08,145 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f4af81792e0> has no local changes
2024-07-14 00:33:08,145 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-dropbox
Already up to date.

Merged PRs:
  - PR 16 joshmoore 'Review all instances of whitelist/blacklist'

Generated by OMERO-python-superbuild-push#115 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/115/)'
2024-07-14 00:33:08,153 [     scc.git] DEBUG [detached HEAD b9cdf14] merge master -Dorg -Ssuccess-only
2024-07-14 00:33:08,154 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-14 00:33:08,154 [    scc.repo] DEBUG ## PRs found:
2024-07-14 00:33:08,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-07-14 00:33:09,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-07-14 00:33:09,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-07-14 00:33:10,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-07-14 00:33:10,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-14 00:33:11,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-07-14 00:33:11,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-07-14 00:33:11,449 [    scc.repo] DEBUG   - PR 69 will-moore 'Roi encoder allows Shape None'
2024-07-14 00:33:11,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-07-14 00:33:12,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-07-14 00:33:12,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-07-14 00:33:13,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-07-14 00:33:13,363 [    scc.repo] DEBUG ## Branches found:
2024-07-14 00:33:13,363 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-07-14 00:33:13,363 [     scc.git] DEBUG Get sha1 of %s
2024-07-14 00:33:13,363 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:33:13,369 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-14 00:33:13,373 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-14 00:33:13,374 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-14 00:33:13,379 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-14 00:33:13,384 [     scc.git] DEBUG Already up to date.

2024-07-14 00:33:13,385 [     scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-07-14 00:33:13,811 [     scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-07-14 00:33:13,811 [     scc.git] DEBUG  * branch            refs/pull/69/head -> FETCH_HEAD
2024-07-14 00:33:13,816 [     scc.git] DEBUG ## Unique users: []
2024-07-14 00:33:13,817 [     scc.git] DEBUG Get sha1 of %s
2024-07-14 00:33:13,817 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:33:13,822 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-07-14 00:33:13,829 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:33:13,835 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-07-14 00:33:13,846 [     scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-07-14 00:33:13,847 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-14 00:33:13,850 [     scc.git] DEBUG  omero_marshal/encode/encoders/roi.py | 5 +++--
2024-07-14 00:33:13,851 [     scc.git] DEBUG  tests/unit/conftest.py               | 5 ++++-
2024-07-14 00:33:13,851 [     scc.git] DEBUG  2 files changed, 7 insertions(+), 3 deletions(-)
2024-07-14 00:33:14,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:33:14,011 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-14 00:33:14,056 [     scc.git] DEBUG Get sha1 of %s
2024-07-14 00:33:14,056 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:33:14,062 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-14 00:33:14,104 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-14 00:33:14,111 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f4af81795b0> has no local changes
2024-07-14 00:33:14,111 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-marshal
Excluded PRs:
  - PR 34 chris-allan 'Initial support for Event' (exclude comment)
  - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.

Merged PRs:
  - PR 69 will-moore 'Roi encoder allows Shape None'

Generated by OMERO-python-superbuild-push#115 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/115/)'
2024-07-14 00:33:14,123 [     scc.git] DEBUG [detached HEAD abc7bb9] merge master -Dorg -Ssuccess-only
2024-07-14 00:33:14,123 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-14 00:33:14,123 [    scc.repo] DEBUG ## PRs found:
2024-07-14 00:33:14,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-07-14 00:33:15,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-07-14 00:33:15,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-07-14 00:33:16,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-07-14 00:33:16,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-14 00:33:17,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-14 00:33:17,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-07-14 00:33:18,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-07-14 00:33:18,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-07-14 00:33:19,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-07-14 00:33:19,071 [    scc.repo] DEBUG   - PR 408 jburel 'remove deprecated method'
2024-07-14 00:33:19,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-07-14 00:33:19,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-07-14 00:33:20,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-07-14 00:33:21,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-14 00:33:21,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-14 00:33:21,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-07-14 00:33:22,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-07-14 00:33:23,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-14 00:33:23,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-14 00:33:23,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-07-14 00:33:24,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-07-14 00:33:24,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-07-14 00:33:25,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-07-14 00:33:25,355 [    scc.repo] DEBUG   - PR 391 joshmoore 'Add jstack command'
2024-07-14 00:33:25,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-07-14 00:33:25,821 [    scc.repo] DEBUG   # ... Exclude label: exclude
2024-07-14 00:33:26,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-07-14 00:33:26,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-07-14 00:33:27,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-07-14 00:33:27,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-14 00:33:28,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-07-14 00:33:28,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-07-14 00:33:28,639 [    scc.repo] DEBUG   - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-07-14 00:33:29,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-07-14 00:33:29,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-07-14 00:33:30,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-07-14 00:33:30,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-14 00:33:31,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-14 00:33:31,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-07-14 00:33:31,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-07-14 00:33:32,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-07-14 00:33:32,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-07-14 00:33:32,844 [    scc.repo] DEBUG   - PR 332 jburel 'Build conda'
2024-07-14 00:33:33,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-07-14 00:33:33,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-07-14 00:33:34,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-07-14 00:33:34,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-07-14 00:33:35,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-07-14 00:33:35,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-14 00:33:36,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-07-14 00:33:36,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-07-14 00:33:36,690 [    scc.repo] DEBUG   - PR 299 joshmoore 'Add parents and children to omero obj'
2024-07-14 00:33:37,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-07-14 00:33:37,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-07-14 00:33:38,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-14 00:33:38,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-07-14 00:33:39,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-07-14 00:33:39,031 [    scc.repo] DEBUG   - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-07-14 00:33:39,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-07-14 00:33:40,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-07-14 00:33:40,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-07-14 00:33:40,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-14 00:33:41,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-07-14 00:33:41,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-07-14 00:33:41,915 [    scc.repo] DEBUG   - PR 207 manics 'BlitzGateway.connect raise on error'
2024-07-14 00:33:42,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-07-14 00:33:42,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-07-14 00:33:43,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-07-14 00:33:43,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-14 00:33:44,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-07-14 00:33:44,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-07-14 00:33:44,784 [    scc.repo] DEBUG   - PR 199 joshmoore 'user: allow setting default group'
2024-07-14 00:33:45,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-07-14 00:33:45,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-07-14 00:33:46,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-07-14 00:33:46,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-07-14 00:33:46,655 [    scc.repo] DEBUG ## Branches found:
2024-07-14 00:33:46,655 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-07-14 00:33:46,655 [     scc.git] DEBUG Get sha1 of %s
2024-07-14 00:33:46,656 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:33:46,663 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-14 00:33:46,667 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-14 00:33:46,668 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-14 00:33:46,672 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-14 00:33:46,677 [     scc.git] DEBUG Already up to date.

2024-07-14 00:33:46,678 [     scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-07-14 00:33:47,326 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-14 00:33:47,326 [     scc.git] DEBUG  * branch              refs/pull/199/head -> FETCH_HEAD
2024-07-14 00:33:47,333 [     scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-07-14 00:33:47,752 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-14 00:33:47,752 [     scc.git] DEBUG  * branch              refs/pull/207/head -> FETCH_HEAD
2024-07-14 00:33:47,759 [     scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-07-14 00:33:48,170 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-14 00:33:48,170 [     scc.git] DEBUG  * branch              refs/pull/266/head -> FETCH_HEAD
2024-07-14 00:33:48,176 [     scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-07-14 00:33:48,542 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-14 00:33:48,542 [     scc.git] DEBUG  * branch              refs/pull/299/head -> FETCH_HEAD
2024-07-14 00:33:48,548 [     scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-07-14 00:33:48,951 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-14 00:33:48,951 [     scc.git] DEBUG  * branch              refs/pull/332/head -> FETCH_HEAD
2024-07-14 00:33:48,959 [     scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-07-14 00:33:49,312 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-14 00:33:49,312 [     scc.git] DEBUG  * branch              refs/pull/337/head -> FETCH_HEAD
2024-07-14 00:33:49,318 [     scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-07-14 00:33:49,671 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-14 00:33:49,671 [     scc.git] DEBUG  * branch              refs/pull/391/head -> FETCH_HEAD
2024-07-14 00:33:49,677 [     scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-07-14 00:33:50,070 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-14 00:33:50,070 [     scc.git] DEBUG  * branch              refs/pull/408/head -> FETCH_HEAD
2024-07-14 00:33:50,076 [     scc.git] DEBUG ## Unique users: []
2024-07-14 00:33:50,077 [     scc.git] DEBUG Get sha1 of %s
2024-07-14 00:33:50,077 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:33:50,082 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-07-14 00:33:50,094 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:33:50,099 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-07-14 00:33:50,157 [     scc.git] DEBUG Auto-merging src/omero/cli.py
2024-07-14 00:33:50,157 [     scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-07-14 00:33:50,158 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-14 00:33:50,162 [     scc.git] DEBUG  src/omero/cli.py          |  6 ++++++
2024-07-14 00:33:50,162 [     scc.git] DEBUG  src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-07-14 00:33:50,162 [     scc.git] DEBUG  2 files changed, 39 insertions(+), 3 deletions(-)
2024-07-14 00:33:50,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:33:50,338 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-07-14 00:33:50,350 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:33:50,355 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-07-14 00:33:50,496 [     scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-07-14 00:33:50,496 [     scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-07-14 00:33:50,497 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-14 00:33:50,504 [     scc.git] DEBUG  src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-07-14 00:33:50,504 [     scc.git] DEBUG  test/unit/test_gateway.py     | 16 ++++++++++++++++
2024-07-14 00:33:50,504 [     scc.git] DEBUG  2 files changed, 29 insertions(+), 6 deletions(-)
2024-07-14 00:33:50,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:33:50,793 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-07-14 00:33:50,805 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:33:50,810 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-07-14 00:33:50,902 [     scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-07-14 00:33:50,923 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-14 00:33:50,926 [     scc.git] DEBUG  src/omero/plugins/search.py | 13 +++++++++----
2024-07-14 00:33:50,926 [     scc.git] DEBUG  1 file changed, 9 insertions(+), 4 deletions(-)
2024-07-14 00:33:51,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:33:51,190 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-07-14 00:33:51,202 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:33:51,208 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-07-14 00:33:51,283 [     scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-07-14 00:33:51,283 [     scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-07-14 00:33:51,289 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-14 00:33:51,293 [     scc.git] DEBUG  src/omero/plugins/obj.py      | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-07-14 00:33:51,293 [     scc.git] DEBUG  test/unit/clitest/test_obj.py |  2 +-
2024-07-14 00:33:51,293 [     scc.git] DEBUG  2 files changed, 69 insertions(+), 2 deletions(-)
2024-07-14 00:33:51,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:33:51,597 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-07-14 00:33:51,609 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:33:51,614 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-07-14 00:33:51,651 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-14 00:33:51,654 [     scc.git] DEBUG  .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-07-14 00:33:51,655 [     scc.git] DEBUG  connect.py                    | 11 +++++++++++
2024-07-14 00:33:51,655 [     scc.git] DEBUG  2 files changed, 48 insertions(+)
2024-07-14 00:33:51,655 [     scc.git] DEBUG  create mode 100644 .github/workflows/install.yml
2024-07-14 00:33:51,655 [     scc.git] DEBUG  create mode 100644 connect.py
2024-07-14 00:33:52,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:33:52,013 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-07-14 00:33:52,025 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:33:52,030 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-07-14 00:33:52,087 [     scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-07-14 00:33:52,088 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-14 00:33:52,092 [     scc.git] DEBUG  src/omero/plugins/import.py | 2 ++
2024-07-14 00:33:52,092 [     scc.git] DEBUG  1 file changed, 2 insertions(+)
2024-07-14 00:33:52,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:33:52,408 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-07-14 00:33:52,420 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:33:52,430 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-07-14 00:33:52,503 [     scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-07-14 00:33:52,504 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-14 00:33:52,508 [     scc.git] DEBUG  src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-07-14 00:33:52,508 [     scc.git] DEBUG  1 file changed, 59 insertions(+), 2 deletions(-)
2024-07-14 00:33:52,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:33:52,824 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-07-14 00:33:52,837 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:33:52,842 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-07-14 00:33:52,909 [     scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-07-14 00:33:52,919 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-14 00:33:52,927 [     scc.git] DEBUG  src/omero/gateway/__init__.py | 36 ------------------------------------
2024-07-14 00:33:52,927 [     scc.git] DEBUG  1 file changed, 36 deletions(-)
2024-07-14 00:33:53,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:33:53,241 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-14 00:33:53,285 [     scc.git] DEBUG Get sha1 of %s
2024-07-14 00:33:53,285 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:33:53,294 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-14 00:33:53,335 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-14 00:33:53,345 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f4af7098cd0> has no local changes
2024-07-14 00:33:53,346 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-py
Excluded PRs:
  - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
  - PR 387 will-moore 'Numpy pixels type' (label: exclude)
  - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
  - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
  - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.

Merged PRs:
  - PR 199 joshmoore 'user: allow setting default group'
  - PR 207 manics 'BlitzGateway.connect raise on error'
  - PR 266 joshmoore 'errors: use raise_error from cli plugins'
  - PR 299 joshmoore 'Add parents and children to omero obj'
  - PR 332 jburel 'Build conda'
  - PR 337 will-moore 'bulk.yml depth is passed to xargs'
  - PR 391 joshmoore 'Add jstack command'
  - PR 408 jburel 'remove deprecated method'

Generated by OMERO-python-superbuild-push#115 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/115/)'
2024-07-14 00:33:53,356 [     scc.git] DEBUG [detached HEAD ece3f509] merge master -Dorg -Ssuccess-only
2024-07-14 00:33:53,356 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-14 00:33:53,357 [     scc.git] INFO  Overriding base-branch from master to develop
2024-07-14 00:33:53,357 [    scc.repo] DEBUG ## PRs found:
2024-07-14 00:33:53,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-07-14 00:33:54,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-07-14 00:33:54,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-07-14 00:33:55,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-07-14 00:33:55,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-07-14 00:33:56,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-07-14 00:33:56,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-07-14 00:33:57,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-07-14 00:33:57,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-14 00:33:58,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-07-14 00:33:58,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-07-14 00:33:58,714 [    scc.repo] DEBUG   - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-07-14 00:33:59,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-07-14 00:33:59,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-07-14 00:34:00,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-07-14 00:34:00,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-07-14 00:34:00,692 [    scc.repo] DEBUG ## Branches found:
2024-07-14 00:34:00,692 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-07-14 00:34:00,692 [     scc.git] DEBUG Get sha1 of %s
2024-07-14 00:34:00,692 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:34:00,698 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-07-14 00:34:00,702 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-14 00:34:00,703 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-07-14 00:34:00,707 [     scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-07-14 00:34:00,712 [     scc.git] DEBUG Already up to date.

2024-07-14 00:34:00,712 [     scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-07-14 00:34:01,230 [     scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-07-14 00:34:01,230 [     scc.git] DEBUG  * branch            refs/pull/202/head -> FETCH_HEAD
2024-07-14 00:34:01,235 [     scc.git] DEBUG ## Unique users: []
2024-07-14 00:34:01,235 [     scc.git] DEBUG Get sha1 of %s
2024-07-14 00:34:01,236 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:34:01,243 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-07-14 00:34:01,252 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:34:01,257 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-07-14 00:34:01,305 [     scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-07-14 00:34:01,305 [     scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-07-14 00:34:01,305 [     scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-07-14 00:34:01,306 [     scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-07-14 00:34:01,311 [     scc.git] DEBUG Calling 'git reset --hard c20d2734b711c659cecea83db6e2ebd7b7013636'
2024-07-14 00:34:01,316 [     scc.git] DEBUG HEAD is now at c20d273 Merge pull request #221 from imcf/fix-typechecking
2024-07-14 00:34:01,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:34:01,482 [     scc.git] DEBUG Calling 'git merge-base c20d2734b711c659cecea83db6e2ebd7b7013636 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-07-14 00:34:01,489 [     scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..c20d2734b711c659cecea83db6e2ebd7b7013636'
2024-07-14 00:34:01,495 [     scc.git] INFO    - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#115](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/115/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/115/consoleText) for more details.
Possible conflicts:
  - Upstream changes
    - omero/annotation_scripts/KeyVal_to_csv.py

--conflicts

2024-07-14 00:34:01,501 [  scc.config] DEBUG Found github.token
2024-07-14 00:34:01,501 [     scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-07-14 00:34:01,502 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-14 00:34:01,542 [     scc.git] DEBUG Get sha1 of %s
2024-07-14 00:34:01,542 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:34:01,547 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-14 00:34:01,586 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-14 00:34:01,592 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f4af70b1bb0> has no local changes
2024-07-14 00:34:01,593 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-scripts
Excluded PRs:
  - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
  - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
  - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
  - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.

Conflicting PRs (not included):
  - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'

Generated by OMERO-python-superbuild-push#115 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/115/)'
2024-07-14 00:34:01,600 [     scc.git] DEBUG [detached HEAD a493421] merge master -Dorg -Ssuccess-only
2024-07-14 00:34:01,601 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-14 00:34:01,601 [    scc.repo] DEBUG ## PRs found:
2024-07-14 00:34:02,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-07-14 00:34:02,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/564 HTTP/1.1" 200 None
2024-07-14 00:34:03,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/564/comments HTTP/1.1" 200 None
2024-07-14 00:34:03,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde HTTP/1.1" 200 None
2024-07-14 00:34:04,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-14 00:34:04,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-14 00:34:05,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde HTTP/1.1" 200 None
2024-07-14 00:34:05,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/091e5fc2d35212271ac71fd66b42c611299d6fde?per_page=1 HTTP/1.1" 200 None
2024-07-14 00:34:06,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde HTTP/1.1" 200 None
2024-07-14 00:34:06,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde/status HTTP/1.1" 200 None
2024-07-14 00:34:06,458 [    scc.repo] DEBUG   - PR 564 knabar 'New table API endpoints for lower level table access'
2024-07-14 00:34:06,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/563 HTTP/1.1" 200 None
2024-07-14 00:34:07,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/563/comments HTTP/1.1" 200 None
2024-07-14 00:34:07,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7 HTTP/1.1" 200 None
2024-07-14 00:34:08,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-14 00:34:08,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-14 00:34:09,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7 HTTP/1.1" 200 None
2024-07-14 00:34:09,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/af88a0cd2aa7d15d9b0dca1ce369060284551de7?per_page=1 HTTP/1.1" 200 None
2024-07-14 00:34:10,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7 HTTP/1.1" 200 None
2024-07-14 00:34:10,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7/status HTTP/1.1" 200 None
2024-07-14 00:34:10,692 [    scc.repo] DEBUG   - PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS'
2024-07-14 00:34:11,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/562 HTTP/1.1" 200 None
2024-07-14 00:34:11,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/560 HTTP/1.1" 200 None
2024-07-14 00:34:12,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/560/comments HTTP/1.1" 200 None
2024-07-14 00:34:12,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823 HTTP/1.1" 200 None
2024-07-14 00:34:13,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-14 00:34:13,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-14 00:34:14,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823 HTTP/1.1" 200 None
2024-07-14 00:34:14,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/f92a4e2764982ace46474a82af4ad25bee9d8823?per_page=1 HTTP/1.1" 200 None
2024-07-14 00:34:15,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823 HTTP/1.1" 200 None
2024-07-14 00:34:15,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823/status HTTP/1.1" 200 None
2024-07-14 00:34:15,501 [    scc.repo] DEBUG   - PR 560 will-moore 'linkify supports urls that include $ character'
2024-07-14 00:34:15,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/558 HTTP/1.1" 200 None
2024-07-14 00:34:16,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/558/comments HTTP/1.1" 200 None
2024-07-14 00:34:16,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/835cfbc948305ce221d873b2a8beb5be288ca9f8 HTTP/1.1" 200 None
2024-07-14 00:34:17,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/835cfbc948305ce221d873b2a8beb5be288ca9f8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-14 00:34:17,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/835cfbc948305ce221d873b2a8beb5be288ca9f8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-14 00:34:18,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/835cfbc948305ce221d873b2a8beb5be288ca9f8 HTTP/1.1" 200 None
2024-07-14 00:34:18,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/835cfbc948305ce221d873b2a8beb5be288ca9f8?per_page=1 HTTP/1.1" 200 None
2024-07-14 00:34:19,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/835cfbc948305ce221d873b2a8beb5be288ca9f8 HTTP/1.1" 200 None
2024-07-14 00:34:19,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/835cfbc948305ce221d873b2a8beb5be288ca9f8/status HTTP/1.1" 200 None
2024-07-14 00:34:19,602 [    scc.repo] DEBUG   - PR 558 jburel 'Update readme'
2024-07-14 00:34:20,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555 HTTP/1.1" 200 None
2024-07-14 00:34:20,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555/comments HTTP/1.1" 200 None
2024-07-14 00:34:21,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None
2024-07-14 00:34:21,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-14 00:34:22,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-14 00:34:22,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None
2024-07-14 00:34:22,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/97e479b717e34179eceea2507d3e69a04b2fec1e?per_page=1 HTTP/1.1" 200 None
2024-07-14 00:34:23,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None
2024-07-14 00:34:23,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/status HTTP/1.1" 200 None
2024-07-14 00:34:23,913 [    scc.repo] DEBUG   - PR 555 chris-allan 'Archive status'
2024-07-14 00:34:24,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/554 HTTP/1.1" 200 None
2024-07-14 00:34:24,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/554/comments HTTP/1.1" 200 None
2024-07-14 00:34:25,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/79c23056136bc929e4ebd57d24600780c92921c5 HTTP/1.1" 200 None
2024-07-14 00:34:25,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/79c23056136bc929e4ebd57d24600780c92921c5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-14 00:34:26,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/79c23056136bc929e4ebd57d24600780c92921c5/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-14 00:34:26,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/79c23056136bc929e4ebd57d24600780c92921c5 HTTP/1.1" 200 None
2024-07-14 00:34:27,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/79c23056136bc929e4ebd57d24600780c92921c5?per_page=1 HTTP/1.1" 200 None
2024-07-14 00:34:27,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/79c23056136bc929e4ebd57d24600780c92921c5 HTTP/1.1" 200 None
2024-07-14 00:34:28,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/79c23056136bc929e4ebd57d24600780c92921c5/status HTTP/1.1" 200 None
2024-07-14 00:34:28,146 [    scc.repo] DEBUG   - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query'
2024-07-14 00:34:28,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-07-14 00:34:29,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-07-14 00:34:29,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-07-14 00:34:30,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-07-14 00:34:30,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-07-14 00:34:30,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-14 00:34:31,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-14 00:34:31,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-07-14 00:34:32,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-07-14 00:34:33,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-07-14 00:34:33,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-07-14 00:34:33,483 [    scc.repo] DEBUG   - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-07-14 00:34:33,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-07-14 00:34:34,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-07-14 00:34:34,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-07-14 00:34:35,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-14 00:34:35,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-14 00:34:36,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-07-14 00:34:36,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-07-14 00:34:37,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-07-14 00:34:37,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-07-14 00:34:37,907 [    scc.repo] DEBUG   - PR 527 will-moore 'Add some initial CSP settings to test'
2024-07-14 00:34:38,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-07-14 00:34:38,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-07-14 00:34:39,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-07-14 00:34:39,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-14 00:34:40,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-14 00:34:40,384 [    scc.repo] DEBUG ## Branches found:
2024-07-14 00:34:40,384 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-07-14 00:34:40,385 [     scc.git] DEBUG Get sha1 of %s
2024-07-14 00:34:40,385 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:34:40,390 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-14 00:34:40,396 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-14 00:34:40,397 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-14 00:34:40,411 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-14 00:34:40,417 [     scc.git] DEBUG Already up to date.

2024-07-14 00:34:40,418 [     scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-07-14 00:34:41,162 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-14 00:34:41,163 [     scc.git] DEBUG  * branch                refs/pull/527/head -> FETCH_HEAD
2024-07-14 00:34:41,168 [     scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-07-14 00:34:41,564 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-14 00:34:41,564 [     scc.git] DEBUG  * branch                refs/pull/534/head -> FETCH_HEAD
2024-07-14 00:34:41,569 [     scc.git] DEBUG Calling 'git fetch origin pull/554/head'
2024-07-14 00:34:42,285 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-14 00:34:42,285 [     scc.git] DEBUG  * branch                refs/pull/554/head -> FETCH_HEAD
2024-07-14 00:34:42,290 [     scc.git] DEBUG Calling 'git fetch origin pull/555/head'
2024-07-14 00:34:43,015 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-14 00:34:43,015 [     scc.git] DEBUG  * branch                refs/pull/555/head -> FETCH_HEAD
2024-07-14 00:34:43,020 [     scc.git] DEBUG Calling 'git fetch origin pull/558/head'
2024-07-14 00:34:43,476 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-14 00:34:43,476 [     scc.git] DEBUG  * branch                refs/pull/558/head -> FETCH_HEAD
2024-07-14 00:34:43,482 [     scc.git] DEBUG Calling 'git fetch origin pull/560/head'
2024-07-14 00:34:43,874 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-14 00:34:43,874 [     scc.git] DEBUG  * branch                refs/pull/560/head -> FETCH_HEAD
2024-07-14 00:34:43,880 [     scc.git] DEBUG Calling 'git fetch origin pull/563/head'
2024-07-14 00:34:44,290 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-14 00:34:44,290 [     scc.git] DEBUG  * branch                refs/pull/563/head -> FETCH_HEAD
2024-07-14 00:34:44,295 [     scc.git] DEBUG Calling 'git fetch origin pull/564/head'
2024-07-14 00:34:44,644 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-14 00:34:44,645 [     scc.git] DEBUG  * branch                refs/pull/564/head -> FETCH_HEAD
2024-07-14 00:34:44,651 [     scc.git] DEBUG ## Unique users: []
2024-07-14 00:34:44,652 [     scc.git] DEBUG Get sha1 of %s
2024-07-14 00:34:44,652 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:34:44,659 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-07-14 00:34:44,666 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:34:44,670 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-07-14 00:34:44,776 [     scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-07-14 00:34:44,776 [     scc.git] DEBUG Auto-merging setup.py
2024-07-14 00:34:44,799 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-14 00:34:44,803 [     scc.git] DEBUG  omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-07-14 00:34:44,803 [     scc.git] DEBUG  setup.py             |  1 +
2024-07-14 00:34:44,803 [     scc.git] DEBUG  2 files changed, 42 insertions(+), 1 deletion(-)
2024-07-14 00:34:44,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:34:44,977 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-07-14 00:34:44,985 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:34:44,989 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-07-14 00:34:45,091 [     scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-07-14 00:34:45,091 [     scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-07-14 00:34:45,092 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-14 00:34:45,096 [     scc.git] DEBUG  omeroweb/webclient/webclient_gateway.py | 2 +-
2024-07-14 00:34:45,096 [     scc.git] DEBUG  omeroweb/webgateway/marshal.py          | 4 ++--
2024-07-14 00:34:45,097 [     scc.git] DEBUG  2 files changed, 3 insertions(+), 3 deletions(-)
2024-07-14 00:34:45,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:34:45,393 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...79c23056136bc929e4ebd57d24600780c92921c5'
2024-07-14 00:34:45,402 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:34:45,407 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 554 (Optimize obj_id_bitmask by using its own query) 79c23056136bc929e4ebd57d24600780c92921c5'
2024-07-14 00:34:45,455 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-14 00:34:45,459 [     scc.git] DEBUG  omeroweb/webgateway/views.py | 77 ++++++++++++++++++++++++++------------------
2024-07-14 00:34:45,459 [     scc.git] DEBUG  test/unit/test_webgateway.py |  9 ++++--
2024-07-14 00:34:45,460 [     scc.git] DEBUG  2 files changed, 51 insertions(+), 35 deletions(-)
2024-07-14 00:34:45,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:34:45,799 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...97e479b717e34179eceea2507d3e69a04b2fec1e'
2024-07-14 00:34:45,808 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:34:45,815 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Archive status) 97e479b717e34179eceea2507d3e69a04b2fec1e'
2024-07-14 00:34:46,031 [     scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-07-14 00:34:46,032 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-14 00:34:46,037 [     scc.git] DEBUG  omeroweb/webclient/static/webclient/javascript/ome.tree.js     |  3 +++
2024-07-14 00:34:46,037 [     scc.git] DEBUG  .../webclient/annotations/includes/core_metadata.html          |  6 ++++++
2024-07-14 00:34:46,037 [     scc.git] DEBUG  omeroweb/webclient/tree.py                                     | 10 ++++++++--
2024-07-14 00:34:46,037 [     scc.git] DEBUG  omeroweb/webgateway/marshal.py                                 |  1 +
2024-07-14 00:34:46,037 [     scc.git] DEBUG  4 files changed, 18 insertions(+), 2 deletions(-)
2024-07-14 00:34:46,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:34:46,242 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...835cfbc948305ce221d873b2a8beb5be288ca9f8'
2024-07-14 00:34:46,250 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:34:46,254 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 558 (Update readme) 835cfbc948305ce221d873b2a8beb5be288ca9f8'
2024-07-14 00:34:46,309 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-14 00:34:46,312 [     scc.git] DEBUG  README.rst | 42 +++++++++++++++++++++---------------------
2024-07-14 00:34:46,312 [     scc.git] DEBUG  1 file changed, 21 insertions(+), 21 deletions(-)
2024-07-14 00:34:46,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:34:46,657 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...f92a4e2764982ace46474a82af4ad25bee9d8823'
2024-07-14 00:34:46,666 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:34:46,672 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 560 (linkify supports urls that include $ character) f92a4e2764982ace46474a82af4ad25bee9d8823'
2024-07-14 00:34:46,700 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-14 00:34:46,704 [     scc.git] DEBUG  omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +-
2024-07-14 00:34:46,705 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 1 deletion(-)
2024-07-14 00:34:47,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:34:47,059 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...af88a0cd2aa7d15d9b0dca1ce369060284551de7'
2024-07-14 00:34:47,067 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:34:47,073 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 563 (Batch by MAX_TABLE_DOWNLOAD_ROWS) af88a0cd2aa7d15d9b0dca1ce369060284551de7'
2024-07-14 00:34:47,152 [     scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2024-07-14 00:34:47,165 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-14 00:34:47,170 [     scc.git] DEBUG  omeroweb/webgateway/views.py | 2 +-
2024-07-14 00:34:47,170 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 1 deletion(-)
2024-07-14 00:34:47,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:34:47,466 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...091e5fc2d35212271ac71fd66b42c611299d6fde'
2024-07-14 00:34:47,475 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:34:47,480 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 564 (New table API endpoints for lower level table access) 091e5fc2d35212271ac71fd66b42c611299d6fde'
2024-07-14 00:34:47,532 [     scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-07-14 00:34:47,532 [     scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2024-07-14 00:34:47,555 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-14 00:34:47,561 [     scc.git] DEBUG  omeroweb/settings.py         |   7 ++
2024-07-14 00:34:47,561 [     scc.git] DEBUG  omeroweb/webgateway/urls.py  |  29 +++++++
2024-07-14 00:34:47,561 [     scc.git] DEBUG  omeroweb/webgateway/views.py | 175 ++++++++++++++++++++++++++++++++++++++++++-
2024-07-14 00:34:47,561 [     scc.git] DEBUG  3 files changed, 210 insertions(+), 1 deletion(-)
2024-07-14 00:34:47,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:34:47,873 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-14 00:34:47,921 [     scc.git] DEBUG Get sha1 of %s
2024-07-14 00:34:47,921 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-14 00:34:47,926 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-14 00:34:47,967 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-14 00:34:47,977 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f4ad7fc84f0> has no local changes
2024-07-14 00:34:47,977 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-web
Excluded PRs:
  - PR 562 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
  - PR 535 will-moore 'Initial working browser history' (stage: draft)
  - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.

Merged PRs:
  - PR 527 will-moore 'Add some initial CSP settings to test'
  - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
  - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query'
  - PR 555 chris-allan 'Archive status'
  - PR 558 jburel 'Update readme'
  - PR 560 will-moore 'linkify supports urls that include $ character'
  - PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS'
  - PR 564 knabar 'New table API endpoints for lower level table access'

Generated by OMERO-python-superbuild-push#115 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/115/)'
2024-07-14 00:34:47,989 [     scc.git] DEBUG [detached HEAD d9d66ab49] merge master -Dorg -Ssuccess-only
2024-07-14 00:34:47,989 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-14 00:34:47,989 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-14 00:34:48,040 [  scc.config] DEBUG Found submodule.omero-dropbox.url
2024-07-14 00:34:48,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:34:48,301 [  scc.config] DEBUG Found submodule.omero-marshal.url
2024-07-14 00:34:48,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:34:48,708 [  scc.config] DEBUG Found submodule.omero-py.url
2024-07-14 00:34:49,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:34:49,107 [  scc.config] DEBUG Found submodule.omero-scripts.url
2024-07-14 00:34:49,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:34:49,527 [  scc.config] DEBUG Found submodule.omero-web.url
2024-07-14 00:34:49,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-14 00:34:49,958 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-14 00:34:49,989 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f4af816da00> has local changes
2024-07-14 00:34:49,989 [     scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-python-superbuild
Already up to date.


Repository: ome/omero-dropbox
Already up to date.

Merged PRs:
  - PR 16 joshmoore 'Review all instances of whitelist/blacklist'

Repository: ome/omero-marshal
Excluded PRs:
  - PR 34 chris-allan 'Initial support for Event' (exclude comment)
  - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.

Merged PRs:
  - PR 69 will-moore 'Roi encoder allows Shape None'

Repository: ome/omero-py
Excluded PRs:
  - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
  - PR 387 will-moore 'Numpy pixels type' (label: exclude)
  - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
  - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
  - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.

Merged PRs:
  - PR 199 joshmoore 'user: allow setting default group'
  - PR 207 manics 'BlitzGateway.connect raise on error'
  - PR 266 joshmoore 'errors: use raise_error from cli plugins'
  - PR 299 joshmoore 'Add parents and children to omero obj'
  - PR 332 jburel 'Build conda'
  - PR 337 will-moore 'bulk.yml depth is passed to xargs'
  - PR 391 joshmoore 'Add jstack command'
  - PR 408 jburel 'remove deprecated method'

Repository: ome/omero-scripts
Excluded PRs:
  - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
  - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
  - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
  - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.

Conflicting PRs (not included):
  - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'

Repository: ome/omero-web
Excluded PRs:
  - PR 562 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
  - PR 535 will-moore 'Initial working browser history' (stage: draft)
  - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.

Merged PRs:
  - PR 527 will-moore 'Add some initial CSP settings to test'
  - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
  - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query'
  - PR 555 chris-allan 'Archive status'
  - PR 558 jburel 'Update readme'
  - PR 560 will-moore 'linkify supports urls that include $ character'
  - PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS'
  - PR 564 knabar 'New table API endpoints for lower level table access'

Generated by OMERO-python-superbuild-push#115 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/115/)'
2024-07-14 00:34:49,999 [     scc.git] DEBUG [detached HEAD 6635ac0] merge master -Dorg -Ssuccess-only
2024-07-14 00:34:50,000 [   scc.merge] INFO  Repository: ome/omero-python-superbuild
2024-07-14 00:34:50,000 [     scc.git] DEBUG  6 files changed, 10 insertions(+), 10 deletions(-)
2024-07-14 00:34:50,000 [   scc.merge] INFO  Already up to date.
2024-07-14 00:34:50,000 [   scc.merge] INFO  
2024-07-14 00:34:50,000 [   scc.merge] INFO  
2024-07-14 00:34:50,000 [   scc.merge] INFO  Repository: ome/omero-dropbox
2024-07-14 00:34:50,000 [   scc.merge] INFO  Already up to date.
2024-07-14 00:34:50,000 [   scc.merge] INFO  
2024-07-14 00:34:50,000 [   scc.merge] INFO  Merged PRs:
2024-07-14 00:34:50,000 [   scc.merge] INFO    - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-07-14 00:34:50,000 [   scc.merge] INFO  
2024-07-14 00:34:50,000 [   scc.merge] INFO  Repository: ome/omero-marshal
2024-07-14 00:34:50,000 [   scc.merge] INFO  Excluded PRs:
2024-07-14 00:34:50,000 [   scc.merge] INFO    - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-07-14 00:34:50,001 [   scc.merge] INFO    - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-07-14 00:34:50,001 [   scc.merge] INFO  Already up to date.
2024-07-14 00:34:50,001 [   scc.merge] INFO  
2024-07-14 00:34:50,001 [   scc.merge] INFO  Merged PRs:
2024-07-14 00:34:50,001 [   scc.merge] INFO    - PR 69 will-moore 'Roi encoder allows Shape None'
2024-07-14 00:34:50,001 [   scc.merge] INFO  
2024-07-14 00:34:50,001 [   scc.merge] INFO  Repository: ome/omero-py
2024-07-14 00:34:50,001 [   scc.merge] INFO  Excluded PRs:
2024-07-14 00:34:50,001 [   scc.merge] INFO    - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-07-14 00:34:50,001 [   scc.merge] INFO    - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-07-14 00:34:50,001 [   scc.merge] INFO    - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-07-14 00:34:50,001 [   scc.merge] INFO    - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-07-14 00:34:50,001 [   scc.merge] INFO    - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-07-14 00:34:50,001 [   scc.merge] INFO  Already up to date.
2024-07-14 00:34:50,001 [   scc.merge] INFO  
2024-07-14 00:34:50,001 [   scc.merge] INFO  Merged PRs:
2024-07-14 00:34:50,001 [   scc.merge] INFO    - PR 199 joshmoore 'user: allow setting default group'
2024-07-14 00:34:50,001 [   scc.merge] INFO    - PR 207 manics 'BlitzGateway.connect raise on error'
2024-07-14 00:34:50,001 [   scc.merge] INFO    - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-07-14 00:34:50,001 [   scc.merge] INFO    - PR 299 joshmoore 'Add parents and children to omero obj'
2024-07-14 00:34:50,001 [   scc.merge] INFO    - PR 332 jburel 'Build conda'
2024-07-14 00:34:50,001 [   scc.merge] INFO    - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-07-14 00:34:50,001 [   scc.merge] INFO    - PR 391 joshmoore 'Add jstack command'
2024-07-14 00:34:50,001 [   scc.merge] INFO    - PR 408 jburel 'remove deprecated method'
2024-07-14 00:34:50,001 [   scc.merge] INFO  
2024-07-14 00:34:50,001 [   scc.merge] INFO  Repository: ome/omero-scripts
2024-07-14 00:34:50,001 [   scc.merge] INFO  Excluded PRs:
2024-07-14 00:34:50,001 [   scc.merge] INFO    - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-07-14 00:34:50,001 [   scc.merge] INFO    - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-07-14 00:34:50,001 [   scc.merge] INFO    - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-07-14 00:34:50,001 [   scc.merge] INFO    - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-07-14 00:34:50,001 [   scc.merge] INFO  Already up to date.
2024-07-14 00:34:50,001 [   scc.merge] INFO  
2024-07-14 00:34:50,001 [   scc.merge] INFO  Conflicting PRs (not included):
2024-07-14 00:34:50,001 [   scc.merge] INFO    - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-07-14 00:34:50,001 [   scc.merge] INFO  
2024-07-14 00:34:50,002 [   scc.merge] INFO  Repository: ome/omero-web
2024-07-14 00:34:50,002 [   scc.merge] INFO  Excluded PRs:
2024-07-14 00:34:50,002 [   scc.merge] INFO    - PR 562 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-07-14 00:34:50,002 [   scc.merge] INFO    - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-07-14 00:34:50,002 [   scc.merge] INFO    - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-07-14 00:34:50,002 [   scc.merge] INFO  Already up to date.
2024-07-14 00:34:50,002 [   scc.merge] INFO  
2024-07-14 00:34:50,002 [   scc.merge] INFO  Merged PRs:
2024-07-14 00:34:50,002 [   scc.merge] INFO    - PR 527 will-moore 'Add some initial CSP settings to test'
2024-07-14 00:34:50,002 [   scc.merge] INFO    - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-07-14 00:34:50,002 [   scc.merge] INFO    - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query'
2024-07-14 00:34:50,002 [   scc.merge] INFO    - PR 555 chris-allan 'Archive status'
2024-07-14 00:34:50,002 [   scc.merge] INFO    - PR 558 jburel 'Update readme'
2024-07-14 00:34:50,002 [   scc.merge] INFO    - PR 560 will-moore 'linkify supports urls that include $ character'
2024-07-14 00:34:50,002 [   scc.merge] INFO    - PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS'
2024-07-14 00:34:50,002 [   scc.merge] INFO    - PR 564 knabar 'New table API endpoints for lower level table access'
2024-07-14 00:34:50,002 [   scc.merge] INFO  
2024-07-14 00:34:50,002 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-07-14 00:34:50,002 [     scc.git] DEBUG Calling 'git remote'
2024-07-14 00:34:50,007 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-07-14 00:34:50,008 [     scc.git] DEBUG Calling 'git remote'
2024-07-14 00:34:50,011 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-14 00:34:50,012 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-07-14 00:34:50,012 [     scc.git] DEBUG Calling 'git remote'
2024-07-14 00:34:50,016 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-14 00:34:50,016 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-07-14 00:34:50,016 [     scc.git] DEBUG Calling 'git remote'
2024-07-14 00:34:50,020 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-14 00:34:50,020 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-07-14 00:34:50,020 [     scc.git] DEBUG Calling 'git remote'
2024-07-14 00:34:50,024 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-14 00:34:50,025 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-07-14 00:34:50,025 [     scc.git] DEBUG Calling 'git remote'
2024-07-14 00:34:50,029 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
    download_blitz_target()
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
    resp = urlopen(loc)
  File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
    return opener.open(url, data, timeout)
  File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
    response = meth(req, response)
  File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
    response = self.parent.error(
  File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
    return self._call_chain(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
    result = func(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
    raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
    download_blitz_target()
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
    resp = urlopen(loc)
  File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
    return opener.open(url, data, timeout)
  File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
    response = meth(req, response)
  File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
    response = self.parent.error(
  File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
    return self._call_chain(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
    result = func(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
    raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 2891df1b
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from c20d273
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 5a2cd79d7
nothing to commit, working tree clean
HEAD detached from 2f19665
nothing to commit, working tree clean
2024-07-14 00:35:20,276 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS