Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-07-17 00:33:23,307 [ scc.config] DEBUG Found github.token
2024-07-17 00:33:23,310 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-07-17 00:33:23,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:33:23,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:33:24,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-07-17 00:33:24,338 [ scc.gh] DEBUG 4998 remaining from 5000 (Reset at 01:07
2024-07-17 00:33:24,339 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-17 00:33:24,343 [ scc.git] DEBUG Check current status
2024-07-17 00:33:24,343 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-17 00:33:24,347 [ scc.git] DEBUG 2f19665 Merge pull request #286 from ome/dependabot/submodules/omero-py-2891df1
2024-07-17 00:33:24,347 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-17 00:33:24,398 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-07-17 00:33:24,401 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-07-17 00:33:24,512 [ scc.git] DEBUG 2891df1bfebe0e9878a0c9f7ff84509d5b7d7093 omero-py (v5.19.3-11-g2891df1b)
2024-07-17 00:33:24,517 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273)
2024-07-17 00:33:24,553 [ scc.git] DEBUG 5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7)
2024-07-17 00:33:24,557 [ scc.config] DEBUG Found remote.origin.url
2024-07-17 00:33:24,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-07-17 00:33:25,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-17 00:33:25,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-17 00:33:26,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-17 00:33:26,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-17 00:33:26,595 [ scc.git] DEBUG Resetting...
2024-07-17 00:33:26,596 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-07-17 00:33:26,602 [ scc.git] DEBUG HEAD is now at 2f19665 Merge pull request #286 from ome/dependabot/submodules/omero-py-2891df1
2024-07-17 00:33:26,603 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-07-17 00:33:26,660 [ scc.git] DEBUG Check current status
2024-07-17 00:33:26,660 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-17 00:33:26,664 [ scc.git] DEBUG 2f19665 Merge pull request #286 from ome/dependabot/submodules/omero-py-2891df1
2024-07-17 00:33:26,664 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-17 00:33:26,719 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-07-17 00:33:26,722 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-07-17 00:33:26,726 [ scc.git] DEBUG 2891df1bfebe0e9878a0c9f7ff84509d5b7d7093 omero-py (v5.19.3-11-g2891df1b)
2024-07-17 00:33:26,730 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273)
2024-07-17 00:33:26,733 [ scc.git] DEBUG 5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7)
2024-07-17 00:33:26,734 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-07-17 00:33:26,734 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-07-17 00:33:26,734 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-07-17 00:33:26,735 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-07-17 00:33:26,735 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-07-17 00:33:26,735 [ scc.repo] DEBUG ## PRs found:
2024-07-17 00:33:27,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-07-17 00:33:27,048 [ scc.repo] DEBUG ## Branches found:
2024-07-17 00:33:27,048 [ scc.git] DEBUG Get sha1 of %s
2024-07-17 00:33:27,048 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:33:27,053 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-17 00:33:27,057 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-17 00:33:27,057 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-17 00:33:27,061 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-17 00:33:27,066 [ scc.git] DEBUG Already up to date.
2024-07-17 00:33:27,066 [ scc.git] DEBUG ## Unique users: []
2024-07-17 00:33:27,066 [ scc.git] DEBUG Get sha1 of %s
2024-07-17 00:33:27,066 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:33:27,070 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-17 00:33:27,113 [ scc.git] DEBUG Get sha1 of %s
2024-07-17 00:33:27,113 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:33:27,117 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-17 00:33:27,216 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f68e21ffaf0> has no local changes
2024-07-17 00:33:27,216 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Generated by OMERO-python-superbuild-push#118 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/118/)'
2024-07-17 00:33:27,244 [ scc.git] DEBUG [detached HEAD 8a12744] merge master -Dorg -Snone
2024-07-17 00:33:27,244 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-07-17 00:33:27,244 [ scc.merge] INFO Already up to date.
2024-07-17 00:33:27,244 [ scc.merge] INFO
2024-07-17 00:33:27,244 [ scc.merge] INFO
2024-07-17 00:33:27,244 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-07-17 00:33:27,244 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-07-17 00:33:29,761 [ scc.config] DEBUG Found github.token
2024-07-17 00:33:29,764 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-07-17 00:33:29,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:33:30,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:33:30,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-07-17 00:33:30,781 [ scc.gh] DEBUG 4990 remaining from 5000 (Reset at 01:07
2024-07-17 00:33:30,782 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-17 00:33:30,786 [ scc.git] DEBUG Check current status
2024-07-17 00:33:30,786 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-17 00:33:30,789 [ scc.git] DEBUG 8a12744 merge master -Dorg -Snone
2024-07-17 00:33:30,790 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-17 00:33:30,834 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-07-17 00:33:30,837 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-07-17 00:33:30,840 [ scc.git] DEBUG 2891df1bfebe0e9878a0c9f7ff84509d5b7d7093 omero-py (v5.19.3-11-g2891df1b)
2024-07-17 00:33:30,845 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273)
2024-07-17 00:33:30,849 [ scc.git] DEBUG 5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7)
2024-07-17 00:33:30,853 [ scc.config] DEBUG Found remote.origin.url
2024-07-17 00:33:30,853 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-07-17 00:33:30,854 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-07-17 00:33:31,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-07-17 00:33:31,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-17 00:33:32,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-17 00:33:32,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-17 00:33:32,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-17 00:33:32,992 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-17 00:33:33,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-07-17 00:33:33,040 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-17 00:33:33,044 [ scc.git] DEBUG Check current status
2024-07-17 00:33:33,044 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-17 00:33:33,049 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-07-17 00:33:33,049 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-17 00:33:33,095 [ scc.config] DEBUG Found remote.origin.url
2024-07-17 00:33:33,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-07-17 00:33:33,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-17 00:33:34,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-17 00:33:34,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-17 00:33:35,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-17 00:33:35,227 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-17 00:33:35,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-17 00:33:35,278 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-07-17 00:33:35,279 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-17 00:33:35,283 [ scc.git] DEBUG Check current status
2024-07-17 00:33:35,284 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-17 00:33:35,289 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-07-17 00:33:35,289 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-17 00:33:35,336 [ scc.config] DEBUG Found remote.origin.url
2024-07-17 00:33:35,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-07-17 00:33:36,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-17 00:33:36,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-17 00:33:37,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-17 00:33:37,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-17 00:33:37,534 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-17 00:33:37,576 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-17 00:33:37,577 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-07-17 00:33:37,577 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-17 00:33:37,581 [ scc.git] DEBUG Check current status
2024-07-17 00:33:37,581 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-17 00:33:37,585 [ scc.git] DEBUG 2891df1b Merge pull request #416 from sbesson/logging_config_parse
2024-07-17 00:33:37,586 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-17 00:33:37,626 [ scc.config] DEBUG Found remote.origin.url
2024-07-17 00:33:38,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-07-17 00:33:38,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-17 00:33:38,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-17 00:33:39,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-17 00:33:39,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-17 00:33:39,720 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-17 00:33:39,761 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-17 00:33:39,762 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-07-17 00:33:39,762 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-17 00:33:39,768 [ scc.git] DEBUG Check current status
2024-07-17 00:33:39,768 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-17 00:33:39,772 [ scc.git] DEBUG c20d273 Merge pull request #221 from imcf/fix-typechecking
2024-07-17 00:33:39,773 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-17 00:33:39,814 [ scc.config] DEBUG Found remote.origin.url
2024-07-17 00:33:39,815 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-07-17 00:33:40,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-07-17 00:33:40,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-17 00:33:41,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-17 00:33:41,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-17 00:33:41,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-17 00:33:41,944 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-17 00:33:41,986 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-17 00:33:41,987 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-07-17 00:33:41,988 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-17 00:33:41,992 [ scc.git] DEBUG Check current status
2024-07-17 00:33:41,992 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-17 00:33:41,997 [ scc.git] DEBUG 5a2cd79d7 Merge pull request #561 from jburel/numpy_less_than_2
2024-07-17 00:33:41,997 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-17 00:33:42,044 [ scc.config] DEBUG Found remote.origin.url
2024-07-17 00:33:42,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-07-17 00:33:43,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-17 00:33:43,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-17 00:33:43,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-17 00:33:44,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-17 00:33:44,284 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-17 00:33:44,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-17 00:33:44,322 [ scc.git] DEBUG Resetting...
2024-07-17 00:33:44,323 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-07-17 00:33:44,329 [ scc.git] DEBUG HEAD is now at 8a12744 merge master -Dorg -Snone
2024-07-17 00:33:44,329 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-07-17 00:33:44,384 [ scc.git] DEBUG Check current status
2024-07-17 00:33:44,384 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-17 00:33:44,388 [ scc.git] DEBUG 8a12744 merge master -Dorg -Snone
2024-07-17 00:33:44,388 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-17 00:33:44,432 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-07-17 00:33:44,435 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-07-17 00:33:44,438 [ scc.git] DEBUG 2891df1bfebe0e9878a0c9f7ff84509d5b7d7093 omero-py (v5.19.3-11-g2891df1b)
2024-07-17 00:33:44,442 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273)
2024-07-17 00:33:44,446 [ scc.git] DEBUG 5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7)
2024-07-17 00:33:44,447 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-07-17 00:33:44,447 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-07-17 00:33:44,447 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-07-17 00:33:44,447 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-07-17 00:33:44,447 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-07-17 00:33:44,447 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-07-17 00:33:44,447 [ scc.repo] DEBUG ## PRs found:
2024-07-17 00:33:44,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-07-17 00:33:44,714 [ scc.repo] DEBUG ## Branches found:
2024-07-17 00:33:44,714 [ scc.git] DEBUG Get sha1 of %s
2024-07-17 00:33:44,714 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:33:44,719 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-17 00:33:44,725 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-17 00:33:44,725 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-17 00:33:44,730 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-17 00:33:44,735 [ scc.git] DEBUG Already up to date.
2024-07-17 00:33:44,735 [ scc.git] DEBUG ## Unique users: []
2024-07-17 00:33:44,735 [ scc.git] DEBUG Get sha1 of %s
2024-07-17 00:33:44,735 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:33:44,739 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-17 00:33:44,785 [ scc.git] DEBUG Get sha1 of %s
2024-07-17 00:33:44,785 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:33:44,790 [ scc.repo] DEBUG ## PRs found:
2024-07-17 00:33:45,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-07-17 00:33:45,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-07-17 00:33:46,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-07-17 00:33:46,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-07-17 00:33:47,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-17 00:33:47,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-07-17 00:33:48,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-07-17 00:33:48,132 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-07-17 00:33:48,132 [ scc.repo] DEBUG ## Branches found:
2024-07-17 00:33:48,132 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-07-17 00:33:48,132 [ scc.git] DEBUG Get sha1 of %s
2024-07-17 00:33:48,132 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:33:48,137 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-17 00:33:48,141 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-17 00:33:48,141 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-17 00:33:48,146 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-17 00:33:48,150 [ scc.git] DEBUG Already up to date.
2024-07-17 00:33:48,151 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-07-17 00:33:48,554 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-07-17 00:33:48,554 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-07-17 00:33:48,559 [ scc.git] DEBUG ## Unique users: []
2024-07-17 00:33:48,559 [ scc.git] DEBUG Get sha1 of %s
2024-07-17 00:33:48,559 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:33:48,564 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-07-17 00:33:48,569 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:33:48,573 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-07-17 00:33:48,647 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-07-17 00:33:48,647 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-07-17 00:33:48,647 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-07-17 00:33:48,647 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-07-17 00:33:48,647 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-07-17 00:33:48,647 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-07-17 00:33:48,647 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-07-17 00:33:48,647 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-07-17 00:33:48,647 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-07-17 00:33:48,648 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-17 00:33:48,652 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-07-17 00:33:48,652 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-07-17 00:33:48,652 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-07-17 00:33:48,652 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-07-17 00:33:48,652 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-07-17 00:33:48,652 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-07-17 00:33:48,654 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-07-17 00:33:48,654 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-07-17 00:33:48,654 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-07-17 00:33:48,655 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-07-17 00:33:48,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:33:48,815 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-17 00:33:48,853 [ scc.git] DEBUG Get sha1 of %s
2024-07-17 00:33:48,853 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:33:48,857 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-17 00:33:48,894 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-17 00:33:48,900 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f09ce00beb0> has no local changes
2024-07-17 00:33:48,900 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#118 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/118/)'
2024-07-17 00:33:48,909 [ scc.git] DEBUG [detached HEAD a65cfd9] merge master -Dorg -Ssuccess-only
2024-07-17 00:33:48,910 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-17 00:33:48,910 [ scc.repo] DEBUG ## PRs found:
2024-07-17 00:33:49,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-07-17 00:33:49,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-07-17 00:33:50,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-07-17 00:33:50,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-07-17 00:33:51,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-17 00:33:51,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-07-17 00:33:52,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-07-17 00:33:52,182 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-07-17 00:33:52,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-07-17 00:33:53,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-07-17 00:33:53,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-07-17 00:33:54,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-07-17 00:33:54,055 [ scc.repo] DEBUG ## Branches found:
2024-07-17 00:33:54,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-07-17 00:33:54,055 [ scc.git] DEBUG Get sha1 of %s
2024-07-17 00:33:54,055 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:33:54,060 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-17 00:33:54,065 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-17 00:33:54,065 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-17 00:33:54,070 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-17 00:33:54,076 [ scc.git] DEBUG Already up to date.
2024-07-17 00:33:54,076 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-07-17 00:33:54,521 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-07-17 00:33:54,521 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-07-17 00:33:54,526 [ scc.git] DEBUG ## Unique users: []
2024-07-17 00:33:54,527 [ scc.git] DEBUG Get sha1 of %s
2024-07-17 00:33:54,527 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:33:54,531 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-07-17 00:33:54,537 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:33:54,541 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-07-17 00:33:54,553 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-07-17 00:33:54,553 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-17 00:33:54,557 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-07-17 00:33:54,557 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-07-17 00:33:54,557 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-07-17 00:33:54,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:33:54,732 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-17 00:33:54,777 [ scc.git] DEBUG Get sha1 of %s
2024-07-17 00:33:54,777 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:33:54,782 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-17 00:33:54,822 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-17 00:33:54,828 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f09ce00ba90> has no local changes
2024-07-17 00:33:54,829 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#118 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/118/)'
2024-07-17 00:33:54,837 [ scc.git] DEBUG [detached HEAD 00a7f10] merge master -Dorg -Ssuccess-only
2024-07-17 00:33:54,838 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-17 00:33:54,838 [ scc.repo] DEBUG ## PRs found:
2024-07-17 00:33:55,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-07-17 00:33:55,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-07-17 00:33:56,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-07-17 00:33:56,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-07-17 00:33:57,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-17 00:33:57,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-17 00:33:58,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-07-17 00:33:58,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-07-17 00:33:59,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-07-17 00:33:59,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-07-17 00:33:59,621 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-07-17 00:34:00,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-07-17 00:34:00,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-07-17 00:34:01,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-07-17 00:34:01,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-17 00:34:02,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-17 00:34:02,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-07-17 00:34:03,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-07-17 00:34:03,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-17 00:34:04,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-17 00:34:04,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-07-17 00:34:04,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-07-17 00:34:05,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-07-17 00:34:05,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-07-17 00:34:05,757 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-07-17 00:34:06,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-07-17 00:34:06,219 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-07-17 00:34:06,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-07-17 00:34:07,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-07-17 00:34:07,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-07-17 00:34:08,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-17 00:34:08,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-07-17 00:34:08,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-07-17 00:34:08,967 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-07-17 00:34:09,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-07-17 00:34:09,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-07-17 00:34:10,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-07-17 00:34:11,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-17 00:34:11,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-17 00:34:11,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-07-17 00:34:12,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-07-17 00:34:12,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-07-17 00:34:13,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-07-17 00:34:13,319 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-07-17 00:34:13,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-07-17 00:34:14,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-07-17 00:34:14,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-07-17 00:34:15,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-07-17 00:34:15,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-07-17 00:34:16,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-17 00:34:16,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-07-17 00:34:17,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-07-17 00:34:17,140 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-07-17 00:34:17,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-07-17 00:34:18,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-07-17 00:34:18,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-17 00:34:19,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-07-17 00:34:19,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-07-17 00:34:19,557 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-07-17 00:34:20,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-07-17 00:34:20,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-07-17 00:34:21,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-07-17 00:34:21,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-17 00:34:22,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-07-17 00:34:22,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-07-17 00:34:22,583 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-07-17 00:34:23,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-07-17 00:34:23,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-07-17 00:34:24,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-07-17 00:34:24,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-17 00:34:25,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-07-17 00:34:25,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-07-17 00:34:25,597 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-07-17 00:34:26,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-07-17 00:34:26,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-07-17 00:34:27,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-07-17 00:34:27,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-07-17 00:34:27,503 [ scc.repo] DEBUG ## Branches found:
2024-07-17 00:34:27,503 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-07-17 00:34:27,503 [ scc.git] DEBUG Get sha1 of %s
2024-07-17 00:34:27,503 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:34:27,509 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-17 00:34:27,513 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-17 00:34:27,513 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-17 00:34:27,518 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-17 00:34:27,523 [ scc.git] DEBUG Already up to date.
2024-07-17 00:34:27,523 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-07-17 00:34:28,166 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-17 00:34:28,166 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-07-17 00:34:28,172 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-07-17 00:34:28,541 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-17 00:34:28,541 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-07-17 00:34:28,547 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-07-17 00:34:28,965 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-17 00:34:28,966 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-07-17 00:34:28,970 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-07-17 00:34:29,310 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-17 00:34:29,310 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-07-17 00:34:29,315 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-07-17 00:34:29,716 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-17 00:34:29,716 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-07-17 00:34:29,721 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-07-17 00:34:30,062 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-17 00:34:30,062 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-07-17 00:34:30,070 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-07-17 00:34:30,414 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-17 00:34:30,414 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-07-17 00:34:30,419 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-07-17 00:34:30,797 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-17 00:34:30,797 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-07-17 00:34:30,803 [ scc.git] DEBUG ## Unique users: []
2024-07-17 00:34:30,803 [ scc.git] DEBUG Get sha1 of %s
2024-07-17 00:34:30,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:34:30,808 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-07-17 00:34:30,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:34:30,824 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-07-17 00:34:30,882 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-07-17 00:34:30,882 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-07-17 00:34:30,883 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-17 00:34:30,887 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-07-17 00:34:30,887 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-07-17 00:34:30,887 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-07-17 00:34:31,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:34:31,060 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-07-17 00:34:31,071 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:34:31,076 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-07-17 00:34:31,180 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-07-17 00:34:31,180 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-07-17 00:34:31,181 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-17 00:34:31,188 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-07-17 00:34:31,188 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-07-17 00:34:31,188 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-07-17 00:34:31,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:34:31,483 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-07-17 00:34:31,494 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:34:31,499 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-07-17 00:34:31,561 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-07-17 00:34:31,562 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-17 00:34:31,566 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-07-17 00:34:31,566 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-07-17 00:34:31,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:34:31,908 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-07-17 00:34:31,922 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:34:31,927 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-07-17 00:34:31,987 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-07-17 00:34:31,987 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-07-17 00:34:31,988 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-17 00:34:31,991 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-07-17 00:34:31,992 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-07-17 00:34:31,992 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-07-17 00:34:32,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:34:32,327 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-07-17 00:34:32,338 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:34:32,343 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-07-17 00:34:32,371 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-17 00:34:32,374 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-07-17 00:34:32,374 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-07-17 00:34:32,374 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-07-17 00:34:32,374 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-07-17 00:34:32,374 [ scc.git] DEBUG create mode 100644 connect.py
2024-07-17 00:34:32,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:34:32,752 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-07-17 00:34:32,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:34:32,771 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-07-17 00:34:32,802 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-07-17 00:34:32,803 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-17 00:34:32,807 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-07-17 00:34:32,807 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-07-17 00:34:33,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:34:33,169 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-07-17 00:34:33,181 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:34:33,185 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-07-17 00:34:33,250 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-07-17 00:34:33,251 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-17 00:34:33,256 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-07-17 00:34:33,256 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-07-17 00:34:33,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:34:33,589 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-07-17 00:34:33,602 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:34:33,606 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-07-17 00:34:33,654 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-07-17 00:34:33,655 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-17 00:34:33,662 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-07-17 00:34:33,662 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-07-17 00:34:34,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:34:34,017 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-17 00:34:34,062 [ scc.git] DEBUG Get sha1 of %s
2024-07-17 00:34:34,062 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:34:34,067 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-17 00:34:34,107 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-17 00:34:34,116 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f09ccf2acd0> has no local changes
2024-07-17 00:34:34,117 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
Generated by OMERO-python-superbuild-push#118 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/118/)'
2024-07-17 00:34:34,126 [ scc.git] DEBUG [detached HEAD 6427cfc7] merge master -Dorg -Ssuccess-only
2024-07-17 00:34:34,127 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-17 00:34:34,127 [ scc.git] INFO Overriding base-branch from master to develop
2024-07-17 00:34:34,127 [ scc.repo] DEBUG ## PRs found:
2024-07-17 00:34:34,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-07-17 00:34:35,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-07-17 00:34:36,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-07-17 00:34:36,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-07-17 00:34:36,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-07-17 00:34:37,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-07-17 00:34:37,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-07-17 00:34:38,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-07-17 00:34:38,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-17 00:34:39,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-07-17 00:34:39,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-07-17 00:34:39,848 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-07-17 00:34:40,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-07-17 00:34:40,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-07-17 00:34:41,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-07-17 00:34:41,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-07-17 00:34:41,943 [ scc.repo] DEBUG ## Branches found:
2024-07-17 00:34:41,943 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-07-17 00:34:41,943 [ scc.git] DEBUG Get sha1 of %s
2024-07-17 00:34:41,943 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:34:41,947 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-07-17 00:34:41,951 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-17 00:34:41,952 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-07-17 00:34:41,957 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-07-17 00:34:41,966 [ scc.git] DEBUG Already up to date.
2024-07-17 00:34:41,966 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-07-17 00:34:42,414 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-07-17 00:34:42,414 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-07-17 00:34:42,419 [ scc.git] DEBUG ## Unique users: []
2024-07-17 00:34:42,420 [ scc.git] DEBUG Get sha1 of %s
2024-07-17 00:34:42,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:34:42,424 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-07-17 00:34:42,430 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:34:42,434 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-07-17 00:34:42,475 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-07-17 00:34:42,475 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-07-17 00:34:42,475 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-07-17 00:34:42,475 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-07-17 00:34:42,481 [ scc.git] DEBUG Calling 'git reset --hard c20d2734b711c659cecea83db6e2ebd7b7013636'
2024-07-17 00:34:42,486 [ scc.git] DEBUG HEAD is now at c20d273 Merge pull request #221 from imcf/fix-typechecking
2024-07-17 00:34:42,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:34:42,654 [ scc.git] DEBUG Calling 'git merge-base c20d2734b711c659cecea83db6e2ebd7b7013636 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-07-17 00:34:42,660 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..c20d2734b711c659cecea83db6e2ebd7b7013636'
2024-07-17 00:34:42,665 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#118](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/118/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/118/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-07-17 00:34:42,669 [ scc.config] DEBUG Found github.token
2024-07-17 00:34:42,669 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-07-17 00:34:42,669 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-17 00:34:42,711 [ scc.git] DEBUG Get sha1 of %s
2024-07-17 00:34:42,712 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:34:42,716 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-17 00:34:42,755 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-17 00:34:42,762 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f09ccf31d60> has no local changes
2024-07-17 00:34:42,762 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#118 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/118/)'
2024-07-17 00:34:42,770 [ scc.git] DEBUG [detached HEAD 2ced52c] merge master -Dorg -Ssuccess-only
2024-07-17 00:34:42,771 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-17 00:34:42,771 [ scc.repo] DEBUG ## PRs found:
2024-07-17 00:34:43,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-07-17 00:34:43,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/564 HTTP/1.1" 200 None
2024-07-17 00:34:44,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/564/comments HTTP/1.1" 200 None
2024-07-17 00:34:45,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde HTTP/1.1" 200 None
2024-07-17 00:34:45,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-17 00:34:46,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-17 00:34:46,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde HTTP/1.1" 200 None
2024-07-17 00:34:46,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/091e5fc2d35212271ac71fd66b42c611299d6fde?per_page=1 HTTP/1.1" 200 None
2024-07-17 00:34:47,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde HTTP/1.1" 200 None
2024-07-17 00:34:47,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde/status HTTP/1.1" 200 None
2024-07-17 00:34:47,944 [ scc.repo] DEBUG - PR 564 knabar 'New table API endpoints for lower level table access'
2024-07-17 00:34:48,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/563 HTTP/1.1" 200 None
2024-07-17 00:34:48,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/563/comments HTTP/1.1" 200 None
2024-07-17 00:34:49,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7 HTTP/1.1" 200 None
2024-07-17 00:34:49,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-17 00:34:50,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-17 00:34:50,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7 HTTP/1.1" 200 None
2024-07-17 00:34:51,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/af88a0cd2aa7d15d9b0dca1ce369060284551de7?per_page=1 HTTP/1.1" 200 None
2024-07-17 00:34:51,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7 HTTP/1.1" 200 None
2024-07-17 00:34:52,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7/status HTTP/1.1" 200 None
2024-07-17 00:34:52,286 [ scc.repo] DEBUG - PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS'
2024-07-17 00:34:52,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/562 HTTP/1.1" 200 None
2024-07-17 00:34:53,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/560 HTTP/1.1" 200 None
2024-07-17 00:34:53,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/560/comments HTTP/1.1" 200 None
2024-07-17 00:34:54,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823 HTTP/1.1" 200 None
2024-07-17 00:34:54,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-17 00:34:55,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-17 00:34:55,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823 HTTP/1.1" 200 None
2024-07-17 00:34:56,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/f92a4e2764982ace46474a82af4ad25bee9d8823?per_page=1 HTTP/1.1" 200 None
2024-07-17 00:34:56,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823 HTTP/1.1" 200 None
2024-07-17 00:34:57,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823/status HTTP/1.1" 200 None
2024-07-17 00:34:57,253 [ scc.repo] DEBUG - PR 560 will-moore 'linkify supports urls that include $ character'
2024-07-17 00:34:57,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/558 HTTP/1.1" 200 None
2024-07-17 00:34:58,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/558/comments HTTP/1.1" 200 None
2024-07-17 00:34:58,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/835cfbc948305ce221d873b2a8beb5be288ca9f8 HTTP/1.1" 200 None
2024-07-17 00:34:59,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/835cfbc948305ce221d873b2a8beb5be288ca9f8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-17 00:34:59,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/835cfbc948305ce221d873b2a8beb5be288ca9f8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-17 00:35:00,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/835cfbc948305ce221d873b2a8beb5be288ca9f8 HTTP/1.1" 200 None
2024-07-17 00:35:00,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/835cfbc948305ce221d873b2a8beb5be288ca9f8?per_page=1 HTTP/1.1" 200 None
2024-07-17 00:35:01,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/835cfbc948305ce221d873b2a8beb5be288ca9f8 HTTP/1.1" 200 None
2024-07-17 00:35:01,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/835cfbc948305ce221d873b2a8beb5be288ca9f8/status HTTP/1.1" 200 None
2024-07-17 00:35:01,775 [ scc.repo] DEBUG - PR 558 jburel 'Update readme'
2024-07-17 00:35:02,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555 HTTP/1.1" 200 None
2024-07-17 00:35:02,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555/comments HTTP/1.1" 200 None
2024-07-17 00:35:03,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None
2024-07-17 00:35:03,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-17 00:35:04,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-17 00:35:04,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None
2024-07-17 00:35:05,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/97e479b717e34179eceea2507d3e69a04b2fec1e?per_page=1 HTTP/1.1" 200 None
2024-07-17 00:35:05,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None
2024-07-17 00:35:06,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/status HTTP/1.1" 200 None
2024-07-17 00:35:06,315 [ scc.repo] DEBUG - PR 555 chris-allan 'Archive status'
2024-07-17 00:35:06,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/554 HTTP/1.1" 200 None
2024-07-17 00:35:07,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/554/comments HTTP/1.1" 200 None
2024-07-17 00:35:07,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/79c23056136bc929e4ebd57d24600780c92921c5 HTTP/1.1" 200 None
2024-07-17 00:35:08,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/79c23056136bc929e4ebd57d24600780c92921c5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-17 00:35:08,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/79c23056136bc929e4ebd57d24600780c92921c5/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-17 00:35:09,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/79c23056136bc929e4ebd57d24600780c92921c5 HTTP/1.1" 200 None
2024-07-17 00:35:09,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/79c23056136bc929e4ebd57d24600780c92921c5?per_page=1 HTTP/1.1" 200 None
2024-07-17 00:35:10,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/79c23056136bc929e4ebd57d24600780c92921c5 HTTP/1.1" 200 None
2024-07-17 00:35:10,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/79c23056136bc929e4ebd57d24600780c92921c5/status HTTP/1.1" 200 None
2024-07-17 00:35:10,863 [ scc.repo] DEBUG - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query'
2024-07-17 00:35:11,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-07-17 00:35:11,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-07-17 00:35:12,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-07-17 00:35:12,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-07-17 00:35:13,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-07-17 00:35:14,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-17 00:35:14,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-17 00:35:15,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-07-17 00:35:15,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-07-17 00:35:16,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-07-17 00:35:16,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-07-17 00:35:16,556 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-07-17 00:35:17,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-07-17 00:35:17,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-07-17 00:35:18,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-07-17 00:35:18,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-17 00:35:19,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-17 00:35:19,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-07-17 00:35:20,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-07-17 00:35:20,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-07-17 00:35:21,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-07-17 00:35:21,247 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-07-17 00:35:21,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-07-17 00:35:22,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-07-17 00:35:22,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-07-17 00:35:23,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-17 00:35:23,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-17 00:35:23,757 [ scc.repo] DEBUG ## Branches found:
2024-07-17 00:35:23,757 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-07-17 00:35:23,757 [ scc.git] DEBUG Get sha1 of %s
2024-07-17 00:35:23,757 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:35:23,762 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-17 00:35:23,767 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-17 00:35:23,767 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-17 00:35:23,779 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-17 00:35:23,784 [ scc.git] DEBUG Already up to date.
2024-07-17 00:35:23,785 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-07-17 00:35:24,382 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-17 00:35:24,383 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-07-17 00:35:24,387 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-07-17 00:35:24,788 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-17 00:35:24,788 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-07-17 00:35:24,793 [ scc.git] DEBUG Calling 'git fetch origin pull/554/head'
2024-07-17 00:35:25,476 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-17 00:35:25,477 [ scc.git] DEBUG * branch refs/pull/554/head -> FETCH_HEAD
2024-07-17 00:35:25,482 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head'
2024-07-17 00:35:26,158 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-17 00:35:26,158 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD
2024-07-17 00:35:26,163 [ scc.git] DEBUG Calling 'git fetch origin pull/558/head'
2024-07-17 00:35:26,599 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-17 00:35:26,600 [ scc.git] DEBUG * branch refs/pull/558/head -> FETCH_HEAD
2024-07-17 00:35:26,604 [ scc.git] DEBUG Calling 'git fetch origin pull/560/head'
2024-07-17 00:35:26,998 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-17 00:35:26,999 [ scc.git] DEBUG * branch refs/pull/560/head -> FETCH_HEAD
2024-07-17 00:35:27,004 [ scc.git] DEBUG Calling 'git fetch origin pull/563/head'
2024-07-17 00:35:27,366 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-17 00:35:27,366 [ scc.git] DEBUG * branch refs/pull/563/head -> FETCH_HEAD
2024-07-17 00:35:27,370 [ scc.git] DEBUG Calling 'git fetch origin pull/564/head'
2024-07-17 00:35:27,748 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-17 00:35:27,748 [ scc.git] DEBUG * branch refs/pull/564/head -> FETCH_HEAD
2024-07-17 00:35:27,753 [ scc.git] DEBUG ## Unique users: []
2024-07-17 00:35:27,753 [ scc.git] DEBUG Get sha1 of %s
2024-07-17 00:35:27,753 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:35:27,758 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-07-17 00:35:27,764 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:35:27,767 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-07-17 00:35:27,826 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-07-17 00:35:27,826 [ scc.git] DEBUG Auto-merging setup.py
2024-07-17 00:35:27,827 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-17 00:35:27,831 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-07-17 00:35:27,831 [ scc.git] DEBUG setup.py | 1 +
2024-07-17 00:35:27,831 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-07-17 00:35:27,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:35:27,986 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-07-17 00:35:27,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:35:27,998 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-07-17 00:35:28,072 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-07-17 00:35:28,072 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-07-17 00:35:28,073 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-17 00:35:28,077 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-07-17 00:35:28,077 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-07-17 00:35:28,077 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-07-17 00:35:28,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:35:28,398 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...79c23056136bc929e4ebd57d24600780c92921c5'
2024-07-17 00:35:28,405 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:35:28,410 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 554 (Optimize obj_id_bitmask by using its own query) 79c23056136bc929e4ebd57d24600780c92921c5'
2024-07-17 00:35:28,448 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-17 00:35:28,452 [ scc.git] DEBUG omeroweb/webgateway/views.py | 77 ++++++++++++++++++++++++++------------------
2024-07-17 00:35:28,452 [ scc.git] DEBUG test/unit/test_webgateway.py | 9 ++++--
2024-07-17 00:35:28,452 [ scc.git] DEBUG 2 files changed, 51 insertions(+), 35 deletions(-)
2024-07-17 00:35:28,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:35:28,828 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...97e479b717e34179eceea2507d3e69a04b2fec1e'
2024-07-17 00:35:28,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:35:28,841 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Archive status) 97e479b717e34179eceea2507d3e69a04b2fec1e'
2024-07-17 00:35:28,938 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-07-17 00:35:28,940 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-17 00:35:28,945 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.tree.js | 3 +++
2024-07-17 00:35:28,945 [ scc.git] DEBUG .../webclient/annotations/includes/core_metadata.html | 6 ++++++
2024-07-17 00:35:28,945 [ scc.git] DEBUG omeroweb/webclient/tree.py | 10 ++++++++--
2024-07-17 00:35:28,945 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 1 +
2024-07-17 00:35:28,945 [ scc.git] DEBUG 4 files changed, 18 insertions(+), 2 deletions(-)
2024-07-17 00:35:29,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:35:29,260 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...835cfbc948305ce221d873b2a8beb5be288ca9f8'
2024-07-17 00:35:29,268 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:35:29,272 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 558 (Update readme) 835cfbc948305ce221d873b2a8beb5be288ca9f8'
2024-07-17 00:35:29,304 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-17 00:35:29,307 [ scc.git] DEBUG README.rst | 42 +++++++++++++++++++++---------------------
2024-07-17 00:35:29,307 [ scc.git] DEBUG 1 file changed, 21 insertions(+), 21 deletions(-)
2024-07-17 00:35:29,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:35:29,685 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f92a4e2764982ace46474a82af4ad25bee9d8823'
2024-07-17 00:35:29,693 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:35:29,697 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 560 (linkify supports urls that include $ character) f92a4e2764982ace46474a82af4ad25bee9d8823'
2024-07-17 00:35:29,722 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-17 00:35:29,726 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +-
2024-07-17 00:35:29,726 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-07-17 00:35:30,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:35:30,098 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...af88a0cd2aa7d15d9b0dca1ce369060284551de7'
2024-07-17 00:35:30,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:35:30,110 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 563 (Batch by MAX_TABLE_DOWNLOAD_ROWS) af88a0cd2aa7d15d9b0dca1ce369060284551de7'
2024-07-17 00:35:30,173 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2024-07-17 00:35:30,174 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-17 00:35:30,178 [ scc.git] DEBUG omeroweb/webgateway/views.py | 2 +-
2024-07-17 00:35:30,178 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-07-17 00:35:30,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:35:30,514 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...091e5fc2d35212271ac71fd66b42c611299d6fde'
2024-07-17 00:35:30,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:35:30,539 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 564 (New table API endpoints for lower level table access) 091e5fc2d35212271ac71fd66b42c611299d6fde'
2024-07-17 00:35:30,564 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-07-17 00:35:30,564 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2024-07-17 00:35:30,565 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-17 00:35:30,570 [ scc.git] DEBUG omeroweb/settings.py | 7 ++
2024-07-17 00:35:30,570 [ scc.git] DEBUG omeroweb/webgateway/urls.py | 29 +++++++
2024-07-17 00:35:30,570 [ scc.git] DEBUG omeroweb/webgateway/views.py | 175 ++++++++++++++++++++++++++++++++++++++++++-
2024-07-17 00:35:30,571 [ scc.git] DEBUG 3 files changed, 210 insertions(+), 1 deletion(-)
2024-07-17 00:35:30,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:35:30,967 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-17 00:35:31,009 [ scc.git] DEBUG Get sha1 of %s
2024-07-17 00:35:31,009 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-17 00:35:31,013 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-17 00:35:31,054 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-17 00:35:31,064 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f09cc6944f0> has no local changes
2024-07-17 00:35:31,065 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 562 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query'
- PR 555 chris-allan 'Archive status'
- PR 558 jburel 'Update readme'
- PR 560 will-moore 'linkify supports urls that include $ character'
- PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS'
- PR 564 knabar 'New table API endpoints for lower level table access'
Generated by OMERO-python-superbuild-push#118 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/118/)'
2024-07-17 00:35:31,076 [ scc.git] DEBUG [detached HEAD a33f913d1] merge master -Dorg -Ssuccess-only
2024-07-17 00:35:31,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-17 00:35:31,076 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-17 00:35:31,129 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-07-17 00:35:31,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:35:31,396 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-07-17 00:35:31,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:35:31,808 [ scc.config] DEBUG Found submodule.omero-py.url
2024-07-17 00:35:32,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:35:32,230 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-07-17 00:35:32,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:35:32,739 [ scc.config] DEBUG Found submodule.omero-web.url
2024-07-17 00:35:33,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-17 00:35:33,145 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-17 00:35:33,172 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f09cdfffb50> has local changes
2024-07-17 00:35:33,172 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 562 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query'
- PR 555 chris-allan 'Archive status'
- PR 558 jburel 'Update readme'
- PR 560 will-moore 'linkify supports urls that include $ character'
- PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS'
- PR 564 knabar 'New table API endpoints for lower level table access'
Generated by OMERO-python-superbuild-push#118 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/118/)'
2024-07-17 00:35:33,180 [ scc.git] DEBUG [detached HEAD 98dd99f] merge master -Dorg -Ssuccess-only
2024-07-17 00:35:33,181 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-07-17 00:35:33,181 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-07-17 00:35:33,181 [ scc.merge] INFO Already up to date.
2024-07-17 00:35:33,181 [ scc.merge] INFO
2024-07-17 00:35:33,181 [ scc.merge] INFO
2024-07-17 00:35:33,181 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-07-17 00:35:33,181 [ scc.merge] INFO Already up to date.
2024-07-17 00:35:33,181 [ scc.merge] INFO
2024-07-17 00:35:33,181 [ scc.merge] INFO Merged PRs:
2024-07-17 00:35:33,181 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-07-17 00:35:33,181 [ scc.merge] INFO
2024-07-17 00:35:33,181 [ scc.merge] INFO Repository: ome/omero-marshal
2024-07-17 00:35:33,181 [ scc.merge] INFO Excluded PRs:
2024-07-17 00:35:33,181 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-07-17 00:35:33,181 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-07-17 00:35:33,181 [ scc.merge] INFO Already up to date.
2024-07-17 00:35:33,181 [ scc.merge] INFO
2024-07-17 00:35:33,181 [ scc.merge] INFO Merged PRs:
2024-07-17 00:35:33,181 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-07-17 00:35:33,181 [ scc.merge] INFO
2024-07-17 00:35:33,181 [ scc.merge] INFO Repository: ome/omero-py
2024-07-17 00:35:33,182 [ scc.merge] INFO Excluded PRs:
2024-07-17 00:35:33,182 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-07-17 00:35:33,182 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-07-17 00:35:33,182 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-07-17 00:35:33,182 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-07-17 00:35:33,182 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-07-17 00:35:33,182 [ scc.merge] INFO Already up to date.
2024-07-17 00:35:33,182 [ scc.merge] INFO
2024-07-17 00:35:33,182 [ scc.merge] INFO Merged PRs:
2024-07-17 00:35:33,182 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-07-17 00:35:33,182 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-07-17 00:35:33,182 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-07-17 00:35:33,182 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-07-17 00:35:33,182 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-07-17 00:35:33,182 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-07-17 00:35:33,182 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-07-17 00:35:33,182 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-07-17 00:35:33,182 [ scc.merge] INFO
2024-07-17 00:35:33,182 [ scc.merge] INFO Repository: ome/omero-scripts
2024-07-17 00:35:33,182 [ scc.merge] INFO Excluded PRs:
2024-07-17 00:35:33,182 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-07-17 00:35:33,182 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-07-17 00:35:33,182 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-07-17 00:35:33,182 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-07-17 00:35:33,182 [ scc.merge] INFO Already up to date.
2024-07-17 00:35:33,182 [ scc.merge] INFO
2024-07-17 00:35:33,182 [ scc.merge] INFO Conflicting PRs (not included):
2024-07-17 00:35:33,182 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-07-17 00:35:33,182 [ scc.merge] INFO
2024-07-17 00:35:33,182 [ scc.merge] INFO Repository: ome/omero-web
2024-07-17 00:35:33,182 [ scc.merge] INFO Excluded PRs:
2024-07-17 00:35:33,182 [ scc.merge] INFO - PR 562 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-07-17 00:35:33,182 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-07-17 00:35:33,182 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-07-17 00:35:33,182 [ scc.merge] INFO Already up to date.
2024-07-17 00:35:33,183 [ scc.merge] INFO
2024-07-17 00:35:33,183 [ scc.merge] INFO Merged PRs:
2024-07-17 00:35:33,183 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-07-17 00:35:33,183 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-07-17 00:35:33,183 [ scc.merge] INFO - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query'
2024-07-17 00:35:33,183 [ scc.merge] INFO - PR 555 chris-allan 'Archive status'
2024-07-17 00:35:33,183 [ scc.merge] INFO - PR 558 jburel 'Update readme'
2024-07-17 00:35:33,183 [ scc.merge] INFO - PR 560 will-moore 'linkify supports urls that include $ character'
2024-07-17 00:35:33,183 [ scc.merge] INFO - PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS'
2024-07-17 00:35:33,183 [ scc.merge] INFO - PR 564 knabar 'New table API endpoints for lower level table access'
2024-07-17 00:35:33,183 [ scc.merge] INFO
2024-07-17 00:35:33,183 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-07-17 00:35:33,183 [ scc.git] DEBUG Calling 'git remote'
2024-07-17 00:35:33,187 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-07-17 00:35:33,187 [ scc.git] DEBUG Calling 'git remote'
2024-07-17 00:35:33,190 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-17 00:35:33,190 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-07-17 00:35:33,190 [ scc.git] DEBUG Calling 'git remote'
2024-07-17 00:35:33,194 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-17 00:35:33,194 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-07-17 00:35:33,194 [ scc.git] DEBUG Calling 'git remote'
2024-07-17 00:35:33,197 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-17 00:35:33,198 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-07-17 00:35:33,198 [ scc.git] DEBUG Calling 'git remote'
2024-07-17 00:35:33,201 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-17 00:35:33,201 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-07-17 00:35:33,201 [ scc.git] DEBUG Calling 'git remote'
2024-07-17 00:35:33,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
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Up-to-date:
grep: build.gradle: No such file or directory
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Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
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Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 2891df1b
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from c20d273
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 5a2cd79d7
nothing to commit, working tree clean
HEAD detached from 2f19665
nothing to commit, working tree clean
2024-07-17 00:36:04,948 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
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