![[Jenkins]](/jenkins/static/a67f30f9/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 145 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision cc9eff3c325328a7ee46857e572be7124cd0358c (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f cc9eff3c325328a7ee46857e572be7124cd0358c # timeout=10 Commit message: "Merge pull request #287 from ome/dependabot/submodules/omero-py-749a68a" > git rev-list --no-walk cc9eff3c325328a7ee46857e572be7124cd0358c # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 127 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.1.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.1.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.19-py2.py3-none-any.whl.metadata (49 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.0-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.7.4-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.19-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.7.4-py3-none-any.whl (162 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-43.0.0-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.7.4 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-43.0.0 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.19 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-07-22 00:33:54,104 [ scc.config] DEBUG Found github.token 2024-07-22 00:33:54,107 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-07-22 00:33:54,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-22 00:33:54,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-22 00:33:55,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-07-22 00:33:55,172 [ scc.gh] DEBUG 4353 remaining from 5000 (Reset at 00:07 2024-07-22 00:33:55,172 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-22 00:33:55,176 [ scc.git] DEBUG Check current status 2024-07-22 00:33:55,177 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-22 00:33:55,180 [ scc.git] DEBUG cc9eff3 Merge pull request #287 from ome/dependabot/submodules/omero-py-749a68a 2024-07-22 00:33:55,181 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-22 00:33:55,226 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-07-22 00:33:55,230 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-07-22 00:33:55,233 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac) 2024-07-22 00:33:55,237 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273) 2024-07-22 00:33:55,256 [ scc.git] DEBUG 5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7) 2024-07-22 00:33:55,260 [ scc.config] DEBUG Found remote.origin.url 2024-07-22 00:33:55,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-07-22 00:33:56,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-22 00:33:56,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-22 00:33:57,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-22 00:33:57,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-22 00:33:57,433 [ scc.git] DEBUG Resetting... 2024-07-22 00:33:57,433 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-07-22 00:33:57,440 [ scc.git] DEBUG HEAD is now at cc9eff3 Merge pull request #287 from ome/dependabot/submodules/omero-py-749a68a 2024-07-22 00:33:57,440 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-07-22 00:33:57,495 [ scc.git] DEBUG Check current status 2024-07-22 00:33:57,495 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-22 00:33:57,500 [ scc.git] DEBUG cc9eff3 Merge pull request #287 from ome/dependabot/submodules/omero-py-749a68a 2024-07-22 00:33:57,500 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-22 00:33:57,542 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-07-22 00:33:57,545 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-07-22 00:33:57,548 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac) 2024-07-22 00:33:57,552 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273) 2024-07-22 00:33:57,556 [ scc.git] DEBUG 5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7) 2024-07-22 00:33:57,557 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-07-22 00:33:57,557 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-07-22 00:33:57,557 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-07-22 00:33:57,557 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-07-22 00:33:57,557 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-07-22 00:33:57,557 [ scc.repo] DEBUG ## PRs found: 2024-07-22 00:33:57,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2024-07-22 00:33:57,864 [ scc.repo] DEBUG ## Branches found: 2024-07-22 00:33:57,864 [ scc.git] DEBUG Get sha1 of %s 2024-07-22 00:33:57,864 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:33:57,869 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-22 00:33:57,872 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-22 00:33:57,873 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-22 00:33:57,877 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-22 00:33:57,881 [ scc.git] DEBUG Already up to date. 2024-07-22 00:33:57,881 [ scc.git] DEBUG ## Unique users: [] 2024-07-22 00:33:57,881 [ scc.git] DEBUG Get sha1 of %s 2024-07-22 00:33:57,881 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:33:57,884 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-22 00:33:57,946 [ scc.git] DEBUG Get sha1 of %s 2024-07-22 00:33:57,946 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:33:57,952 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-22 00:33:58,186 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4a97b7b8e0> has no local changes 2024-07-22 00:33:58,187 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#123 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/123/)' 2024-07-22 00:33:58,212 [ scc.git] DEBUG [detached HEAD 75a6695] merge master -Dorg -Snone 2024-07-22 00:33:58,213 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-07-22 00:33:58,213 [ scc.merge] INFO Already up to date. 2024-07-22 00:33:58,213 [ scc.merge] INFO 2024-07-22 00:33:58,213 [ scc.merge] INFO 2024-07-22 00:33:58,213 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-07-22 00:33:58,213 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Submodule path 'omero-web': checked out 'ba8c7e23c5d3343992812b7579e8d2cf30eb5374' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-07-22 00:34:00,726 [ scc.config] DEBUG Found github.token 2024-07-22 00:34:00,729 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-07-22 00:34:00,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-22 00:34:01,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-22 00:34:01,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-07-22 00:34:01,833 [ scc.gh] DEBUG 4345 remaining from 5000 (Reset at 00:07 2024-07-22 00:34:01,834 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-22 00:34:01,839 [ scc.git] DEBUG Check current status 2024-07-22 00:34:01,839 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-22 00:34:01,844 [ scc.git] DEBUG 75a6695 merge master -Dorg -Snone 2024-07-22 00:34:01,844 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-22 00:34:01,885 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-07-22 00:34:01,887 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-07-22 00:34:01,891 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac) 2024-07-22 00:34:01,894 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273) 2024-07-22 00:34:02,084 [ scc.git] DEBUG +ba8c7e23c5d3343992812b7579e8d2cf30eb5374 omero-web (v5.26.0-28-gba8c7e23c) 2024-07-22 00:34:02,089 [ scc.config] DEBUG Found remote.origin.url 2024-07-22 00:34:02,090 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-07-22 00:34:02,091 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-07-22 00:34:02,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-07-22 00:34:02,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-22 00:34:03,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-22 00:34:03,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-22 00:34:04,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-22 00:34:04,160 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-22 00:34:04,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-07-22 00:34:04,212 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-22 00:34:04,216 [ scc.git] DEBUG Check current status 2024-07-22 00:34:04,217 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-22 00:34:04,220 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0 2024-07-22 00:34:04,221 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-22 00:34:04,268 [ scc.config] DEBUG Found remote.origin.url 2024-07-22 00:34:04,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2024-07-22 00:34:05,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-22 00:34:05,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-22 00:34:05,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-22 00:34:06,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-22 00:34:06,423 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-22 00:34:06,464 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-22 00:34:06,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-07-22 00:34:06,466 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-22 00:34:06,471 [ scc.git] DEBUG Check current status 2024-07-22 00:34:06,471 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-22 00:34:06,477 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312 2024-07-22 00:34:06,477 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-22 00:34:06,523 [ scc.config] DEBUG Found remote.origin.url 2024-07-22 00:34:06,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2024-07-22 00:34:07,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-22 00:34:07,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-22 00:34:08,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-22 00:34:08,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-22 00:34:08,638 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-22 00:34:08,677 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-22 00:34:08,678 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-07-22 00:34:08,678 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-22 00:34:08,682 [ scc.git] DEBUG Check current status 2024-07-22 00:34:08,683 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-22 00:34:08,700 [ scc.git] DEBUG 749a68ac Bump version: 5.19.4 → 5.19.5.dev0 2024-07-22 00:34:08,700 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-22 00:34:08,744 [ scc.config] DEBUG Found remote.origin.url 2024-07-22 00:34:09,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2024-07-22 00:34:09,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-22 00:34:10,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-22 00:34:10,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-22 00:34:10,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-22 00:34:10,872 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-22 00:34:10,913 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-22 00:34:10,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-07-22 00:34:10,914 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-22 00:34:10,918 [ scc.git] DEBUG Check current status 2024-07-22 00:34:10,918 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-22 00:34:10,922 [ scc.git] DEBUG c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-07-22 00:34:10,923 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-22 00:34:10,966 [ scc.config] DEBUG Found remote.origin.url 2024-07-22 00:34:10,967 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-07-22 00:34:11,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2024-07-22 00:34:11,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-22 00:34:12,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-22 00:34:12,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-22 00:34:13,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-22 00:34:13,146 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-22 00:34:13,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-22 00:34:13,186 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-07-22 00:34:13,186 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-22 00:34:13,191 [ scc.git] DEBUG Check current status 2024-07-22 00:34:13,191 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-22 00:34:13,218 [ scc.git] DEBUG ba8c7e23c Merge pull request #563 from chris-allan/batch-by-max-download-rows 2024-07-22 00:34:13,219 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-22 00:34:13,260 [ scc.config] DEBUG Found remote.origin.url 2024-07-22 00:34:13,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2024-07-22 00:34:14,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-22 00:34:14,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-22 00:34:14,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-22 00:34:15,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-22 00:34:15,403 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-22 00:34:15,448 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-22 00:34:15,448 [ scc.git] DEBUG Resetting... 2024-07-22 00:34:15,449 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-07-22 00:34:15,456 [ scc.git] DEBUG HEAD is now at 75a6695 merge master -Dorg -Snone 2024-07-22 00:34:15,457 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-07-22 00:34:15,530 [ scc.git] DEBUG Submodule path 'omero-web': checked out '5a2cd79d7cb7847d560e98f1d11240794e7be47f' 2024-07-22 00:34:15,534 [ scc.git] DEBUG Check current status 2024-07-22 00:34:15,534 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-22 00:34:15,540 [ scc.git] DEBUG 75a6695 merge master -Dorg -Snone 2024-07-22 00:34:15,541 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-22 00:34:15,588 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-07-22 00:34:15,591 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-07-22 00:34:15,595 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac) 2024-07-22 00:34:15,599 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273) 2024-07-22 00:34:15,602 [ scc.git] DEBUG 5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7) 2024-07-22 00:34:15,603 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-07-22 00:34:15,603 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-07-22 00:34:15,603 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-07-22 00:34:15,603 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-07-22 00:34:15,604 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-07-22 00:34:15,604 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-07-22 00:34:15,604 [ scc.repo] DEBUG ## PRs found: 2024-07-22 00:34:15,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2024-07-22 00:34:15,850 [ scc.repo] DEBUG ## Branches found: 2024-07-22 00:34:15,850 [ scc.git] DEBUG Get sha1 of %s 2024-07-22 00:34:15,850 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:34:15,855 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-22 00:34:15,859 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-22 00:34:15,859 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-22 00:34:15,863 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-22 00:34:15,867 [ scc.git] DEBUG Already up to date. 2024-07-22 00:34:15,867 [ scc.git] DEBUG ## Unique users: [] 2024-07-22 00:34:15,867 [ scc.git] DEBUG Get sha1 of %s 2024-07-22 00:34:15,867 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:34:15,871 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-22 00:34:15,911 [ scc.git] DEBUG Get sha1 of %s 2024-07-22 00:34:15,911 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:34:15,915 [ scc.repo] DEBUG ## PRs found: 2024-07-22 00:34:16,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2024-07-22 00:34:16,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2024-07-22 00:34:17,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2024-07-22 00:34:17,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-07-22 00:34:18,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-22 00:34:18,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-07-22 00:34:19,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2024-07-22 00:34:19,397 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-07-22 00:34:19,397 [ scc.repo] DEBUG ## Branches found: 2024-07-22 00:34:19,397 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-07-22 00:34:19,398 [ scc.git] DEBUG Get sha1 of %s 2024-07-22 00:34:19,398 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:34:19,403 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-22 00:34:19,407 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-22 00:34:19,408 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-22 00:34:19,412 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-22 00:34:19,417 [ scc.git] DEBUG Already up to date. 2024-07-22 00:34:19,417 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2024-07-22 00:34:19,834 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2024-07-22 00:34:19,834 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2024-07-22 00:34:19,840 [ scc.git] DEBUG ## Unique users: [] 2024-07-22 00:34:19,840 [ scc.git] DEBUG Get sha1 of %s 2024-07-22 00:34:19,840 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:34:19,845 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-07-22 00:34:19,850 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:34:19,855 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-07-22 00:34:19,980 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2024-07-22 00:34:19,980 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2024-07-22 00:34:19,980 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2024-07-22 00:34:19,980 [ scc.git] DEBUG Auto-merging src/fsLists.py 2024-07-22 00:34:19,980 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2024-07-22 00:34:19,980 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2024-07-22 00:34:19,980 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2024-07-22 00:34:19,980 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2024-07-22 00:34:19,980 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2024-07-22 00:34:19,981 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-22 00:34:19,985 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2024-07-22 00:34:19,985 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2024-07-22 00:34:19,985 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2024-07-22 00:34:19,985 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2024-07-22 00:34:19,985 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2024-07-22 00:34:19,985 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2024-07-22 00:34:19,985 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2024-07-22 00:34:19,985 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2024-07-22 00:34:19,985 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2024-07-22 00:34:19,985 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2024-07-22 00:34:20,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-22 00:34:20,177 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-22 00:34:20,218 [ scc.git] DEBUG Get sha1 of %s 2024-07-22 00:34:20,219 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:34:20,223 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-22 00:34:20,264 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-22 00:34:20,271 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f37522eeeb0> has no local changes 2024-07-22 00:34:20,272 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#123 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/123/)' 2024-07-22 00:34:20,280 [ scc.git] DEBUG [detached HEAD 286b6a2] merge master -Dorg -Ssuccess-only 2024-07-22 00:34:20,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-22 00:34:20,281 [ scc.repo] DEBUG ## PRs found: 2024-07-22 00:34:20,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2024-07-22 00:34:21,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2024-07-22 00:34:21,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2024-07-22 00:34:22,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-07-22 00:34:22,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-22 00:34:23,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-07-22 00:34:23,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2024-07-22 00:34:23,569 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2024-07-22 00:34:24,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2024-07-22 00:34:24,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2024-07-22 00:34:25,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2024-07-22 00:34:25,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2024-07-22 00:34:25,466 [ scc.repo] DEBUG ## Branches found: 2024-07-22 00:34:25,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-07-22 00:34:25,466 [ scc.git] DEBUG Get sha1 of %s 2024-07-22 00:34:25,466 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:34:25,471 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-22 00:34:25,476 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-22 00:34:25,476 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-22 00:34:25,481 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-22 00:34:25,486 [ scc.git] DEBUG Already up to date. 2024-07-22 00:34:25,487 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2024-07-22 00:34:25,871 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2024-07-22 00:34:25,871 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2024-07-22 00:34:25,877 [ scc.git] DEBUG ## Unique users: [] 2024-07-22 00:34:25,878 [ scc.git] DEBUG Get sha1 of %s 2024-07-22 00:34:25,878 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:34:25,882 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-07-22 00:34:25,887 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:34:25,891 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-07-22 00:34:25,913 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2024-07-22 00:34:25,913 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-22 00:34:25,916 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2024-07-22 00:34:25,916 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2024-07-22 00:34:25,917 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2024-07-22 00:34:26,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-22 00:34:26,100 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-22 00:34:26,139 [ scc.git] DEBUG Get sha1 of %s 2024-07-22 00:34:26,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:34:26,143 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-22 00:34:26,184 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-22 00:34:26,191 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3752316700> has no local changes 2024-07-22 00:34:26,191 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#123 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/123/)' 2024-07-22 00:34:26,200 [ scc.git] DEBUG [detached HEAD 9afd973] merge master -Dorg -Ssuccess-only 2024-07-22 00:34:26,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-22 00:34:26,201 [ scc.repo] DEBUG ## PRs found: 2024-07-22 00:34:26,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2024-07-22 00:34:27,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2024-07-22 00:34:27,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2024-07-22 00:34:28,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-07-22 00:34:28,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-22 00:34:29,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-22 00:34:29,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-07-22 00:34:30,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2024-07-22 00:34:30,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-07-22 00:34:31,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2024-07-22 00:34:31,090 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2024-07-22 00:34:31,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2024-07-22 00:34:32,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2024-07-22 00:34:32,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2024-07-22 00:34:33,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-22 00:34:33,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-22 00:34:34,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2024-07-22 00:34:34,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-07-22 00:34:35,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-22 00:34:35,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-22 00:34:36,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-07-22 00:34:36,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None 2024-07-22 00:34:36,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-07-22 00:34:37,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None 2024-07-22 00:34:37,414 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2024-07-22 00:34:37,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None 2024-07-22 00:34:37,908 [ scc.repo] DEBUG # ... Exclude label: exclude 2024-07-22 00:34:38,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None 2024-07-22 00:34:38,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None 2024-07-22 00:34:39,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-07-22 00:34:39,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-22 00:34:40,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-07-22 00:34:40,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2 2024-07-22 00:34:40,834 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-07-22 00:34:41,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2024-07-22 00:34:41,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2024-07-22 00:34:42,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-07-22 00:34:42,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-22 00:34:43,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-22 00:34:43,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-07-22 00:34:44,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None 2024-07-22 00:34:44,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-07-22 00:34:45,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None 2024-07-22 00:34:45,349 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2024-07-22 00:34:45,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None 2024-07-22 00:34:46,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None 2024-07-22 00:34:46,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2024-07-22 00:34:47,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2024-07-22 00:34:47,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-07-22 00:34:48,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-22 00:34:48,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-07-22 00:34:49,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2 2024-07-22 00:34:49,270 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj' 2024-07-22 00:34:49,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None 2024-07-22 00:34:50,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-07-22 00:34:50,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-22 00:34:51,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-07-22 00:34:51,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2 2024-07-22 00:34:51,614 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-07-22 00:34:52,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None 2024-07-22 00:34:52,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None 2024-07-22 00:34:53,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-07-22 00:34:53,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-22 00:34:54,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-07-22 00:34:54,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2 2024-07-22 00:34:54,551 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error' 2024-07-22 00:34:55,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2024-07-22 00:34:55,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2024-07-22 00:34:56,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-07-22 00:34:56,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-22 00:34:57,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-07-22 00:34:57,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2024-07-22 00:34:57,438 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2024-07-22 00:34:57,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None 2024-07-22 00:34:58,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None 2024-07-22 00:34:58,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None 2024-07-22 00:34:59,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None 2024-07-22 00:34:59,366 [ scc.repo] DEBUG ## Branches found: 2024-07-22 00:34:59,366 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-07-22 00:34:59,366 [ scc.git] DEBUG Get sha1 of %s 2024-07-22 00:34:59,366 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:34:59,376 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-22 00:34:59,386 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-22 00:34:59,387 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-22 00:34:59,397 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-22 00:34:59,408 [ scc.git] DEBUG Already up to date. 2024-07-22 00:34:59,409 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2024-07-22 00:35:00,273 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-22 00:35:00,273 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2024-07-22 00:35:00,280 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head' 2024-07-22 00:35:00,694 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-22 00:35:00,694 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD 2024-07-22 00:35:00,699 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head' 2024-07-22 00:35:01,049 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-22 00:35:01,049 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD 2024-07-22 00:35:01,054 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head' 2024-07-22 00:35:01,401 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-22 00:35:01,401 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD 2024-07-22 00:35:01,406 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2024-07-22 00:35:01,812 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-22 00:35:01,812 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2024-07-22 00:35:01,819 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2024-07-22 00:35:02,153 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-22 00:35:02,153 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2024-07-22 00:35:02,160 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2024-07-22 00:35:02,538 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-22 00:35:02,539 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2024-07-22 00:35:02,545 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2024-07-22 00:35:02,925 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-22 00:35:02,925 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2024-07-22 00:35:02,931 [ scc.git] DEBUG ## Unique users: [] 2024-07-22 00:35:02,931 [ scc.git] DEBUG Get sha1 of %s 2024-07-22 00:35:02,931 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:35:02,937 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-07-22 00:35:02,949 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:35:02,954 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-07-22 00:35:02,976 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2024-07-22 00:35:02,977 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2024-07-22 00:35:02,979 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-22 00:35:02,983 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2024-07-22 00:35:02,983 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2024-07-22 00:35:02,983 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2024-07-22 00:35:03,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-22 00:35:03,147 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-07-22 00:35:03,159 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:35:03,164 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-07-22 00:35:03,210 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-07-22 00:35:03,210 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py 2024-07-22 00:35:03,218 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-22 00:35:03,225 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------ 2024-07-22 00:35:03,225 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++ 2024-07-22 00:35:03,225 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-) 2024-07-22 00:35:03,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-22 00:35:03,563 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-07-22 00:35:03,575 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:35:03,580 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-07-22 00:35:03,639 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py 2024-07-22 00:35:03,639 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-22 00:35:03,643 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++---- 2024-07-22 00:35:03,643 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-) 2024-07-22 00:35:03,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-22 00:35:03,965 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a' 2024-07-22 00:35:03,977 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:35:03,983 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a' 2024-07-22 00:35:04,009 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py 2024-07-22 00:35:04,009 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py 2024-07-22 00:35:04,011 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-22 00:35:04,015 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++- 2024-07-22 00:35:04,015 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +- 2024-07-22 00:35:04,015 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-) 2024-07-22 00:35:04,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-22 00:35:04,390 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-07-22 00:35:04,405 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:35:04,410 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-07-22 00:35:04,445 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-22 00:35:04,448 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2024-07-22 00:35:04,449 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2024-07-22 00:35:04,449 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2024-07-22 00:35:04,449 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2024-07-22 00:35:04,449 [ scc.git] DEBUG create mode 100644 connect.py 2024-07-22 00:35:04,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-22 00:35:04,819 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-07-22 00:35:04,831 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:35:04,836 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-07-22 00:35:04,927 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py 2024-07-22 00:35:04,928 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-22 00:35:04,931 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++ 2024-07-22 00:35:04,931 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-07-22 00:35:05,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-22 00:35:05,230 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2024-07-22 00:35:05,242 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:35:05,247 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2024-07-22 00:35:05,349 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2024-07-22 00:35:05,350 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-22 00:35:05,354 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2024-07-22 00:35:05,354 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2024-07-22 00:35:05,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-22 00:35:05,636 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2024-07-22 00:35:05,648 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:35:05,653 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2024-07-22 00:35:05,709 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-07-22 00:35:05,710 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-22 00:35:05,717 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2024-07-22 00:35:05,717 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2024-07-22 00:35:06,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-22 00:35:06,048 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-22 00:35:06,095 [ scc.git] DEBUG Get sha1 of %s 2024-07-22 00:35:06,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:35:06,101 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-22 00:35:06,141 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-22 00:35:06,153 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3751227f10> has no local changes 2024-07-22 00:35:06,153 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' Generated by OMERO-python-superbuild-push#123 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/123/)' 2024-07-22 00:35:06,163 [ scc.git] DEBUG [detached HEAD a56af082] merge master -Dorg -Ssuccess-only 2024-07-22 00:35:06,163 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-22 00:35:06,163 [ scc.git] INFO Overriding base-branch from master to develop 2024-07-22 00:35:06,163 [ scc.repo] DEBUG ## PRs found: 2024-07-22 00:35:06,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-07-22 00:35:07,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-07-22 00:35:07,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-07-22 00:35:08,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-07-22 00:35:08,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-07-22 00:35:09,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-07-22 00:35:09,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-07-22 00:35:10,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-07-22 00:35:10,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-22 00:35:11,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-07-22 00:35:11,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-07-22 00:35:11,709 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-07-22 00:35:12,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-07-22 00:35:12,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-07-22 00:35:13,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-07-22 00:35:13,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-07-22 00:35:13,825 [ scc.repo] DEBUG ## Branches found: 2024-07-22 00:35:13,825 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-07-22 00:35:13,825 [ scc.git] DEBUG Get sha1 of %s 2024-07-22 00:35:13,825 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:35:13,830 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-07-22 00:35:13,834 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-22 00:35:13,834 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-07-22 00:35:13,840 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-07-22 00:35:13,847 [ scc.git] DEBUG Already up to date. 2024-07-22 00:35:13,847 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-07-22 00:35:14,276 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2024-07-22 00:35:14,276 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-07-22 00:35:14,281 [ scc.git] DEBUG ## Unique users: [] 2024-07-22 00:35:14,281 [ scc.git] DEBUG Get sha1 of %s 2024-07-22 00:35:14,281 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:35:14,286 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-22 00:35:14,292 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:35:14,296 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-22 00:35:14,334 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-07-22 00:35:14,334 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-07-22 00:35:14,334 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-22 00:35:14,335 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-22 00:35:14,340 [ scc.git] DEBUG Calling 'git reset --hard c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-07-22 00:35:14,345 [ scc.git] DEBUG HEAD is now at c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-07-22 00:35:14,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-22 00:35:14,514 [ scc.git] DEBUG Calling 'git merge-base c20d2734b711c659cecea83db6e2ebd7b7013636 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-22 00:35:14,521 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-07-22 00:35:14,526 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#123](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/123/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/123/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-07-22 00:35:14,530 [ scc.config] DEBUG Found github.token 2024-07-22 00:35:14,530 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-07-22 00:35:14,530 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-22 00:35:14,567 [ scc.git] DEBUG Get sha1 of %s 2024-07-22 00:35:14,568 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:35:14,572 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-22 00:35:14,610 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-22 00:35:14,616 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f37511d6640> has no local changes 2024-07-22 00:35:14,616 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#123 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/123/)' 2024-07-22 00:35:14,628 [ scc.git] DEBUG [detached HEAD 12c6fed] merge master -Dorg -Ssuccess-only 2024-07-22 00:35:14,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-22 00:35:14,629 [ scc.repo] DEBUG ## PRs found: 2024-07-22 00:35:15,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2024-07-22 00:35:15,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568 HTTP/1.1" 200 None 2024-07-22 00:35:16,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/564 HTTP/1.1" 200 None 2024-07-22 00:35:16,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/564/comments HTTP/1.1" 200 None 2024-07-22 00:35:17,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde HTTP/1.1" 200 None 2024-07-22 00:35:17,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-22 00:35:18,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-22 00:35:18,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde HTTP/1.1" 200 None 2024-07-22 00:35:19,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/091e5fc2d35212271ac71fd66b42c611299d6fde?per_page=1 HTTP/1.1" 200 None 2024-07-22 00:35:19,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde HTTP/1.1" 200 None 2024-07-22 00:35:19,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde/status HTTP/1.1" 200 None 2024-07-22 00:35:19,929 [ scc.repo] DEBUG - PR 564 knabar 'New table API endpoints for lower level table access' 2024-07-22 00:35:20,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555 HTTP/1.1" 200 None 2024-07-22 00:35:20,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555/comments HTTP/1.1" 200 None 2024-07-22 00:35:21,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None 2024-07-22 00:35:21,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-22 00:35:22,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-22 00:35:22,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None 2024-07-22 00:35:23,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/97e479b717e34179eceea2507d3e69a04b2fec1e?per_page=1 HTTP/1.1" 200 None 2024-07-22 00:35:23,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None 2024-07-22 00:35:24,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/status HTTP/1.1" 200 None 2024-07-22 00:35:24,246 [ scc.repo] DEBUG - PR 555 chris-allan 'Archive status' 2024-07-22 00:35:24,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2024-07-22 00:35:25,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2024-07-22 00:35:25,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2024-07-22 00:35:26,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2024-07-22 00:35:26,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-07-22 00:35:27,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-22 00:35:27,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-22 00:35:28,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-07-22 00:35:28,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None 2024-07-22 00:35:29,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-07-22 00:35:29,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None 2024-07-22 00:35:29,629 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-07-22 00:35:30,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2024-07-22 00:35:30,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2024-07-22 00:35:31,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-07-22 00:35:31,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-22 00:35:32,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-22 00:35:32,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-07-22 00:35:33,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None 2024-07-22 00:35:33,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-07-22 00:35:33,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None 2024-07-22 00:35:33,920 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2024-07-22 00:35:34,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2024-07-22 00:35:34,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2024-07-22 00:35:35,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2024-07-22 00:35:35,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-22 00:35:36,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-22 00:35:36,441 [ scc.repo] DEBUG ## Branches found: 2024-07-22 00:35:36,441 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-07-22 00:35:36,441 [ scc.git] DEBUG Get sha1 of %s 2024-07-22 00:35:36,442 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:35:36,449 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-22 00:35:36,455 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-22 00:35:36,456 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-22 00:35:36,463 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-22 00:35:36,485 [ scc.git] DEBUG Updating 5a2cd79d7..ba8c7e23c 2024-07-22 00:35:37,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/563 HTTP/1.1" 200 None 2024-07-22 00:35:37,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/554 HTTP/1.1" 200 None 2024-07-22 00:35:38,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/562 HTTP/1.1" 200 None 2024-07-22 00:35:39,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/560 HTTP/1.1" 200 None 2024-07-22 00:35:39,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/558 HTTP/1.1" 200 None 2024-07-22 00:35:39,853 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2024-07-22 00:35:40,330 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-22 00:35:40,330 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2024-07-22 00:35:40,336 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2024-07-22 00:35:40,734 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-22 00:35:40,734 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2024-07-22 00:35:40,740 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-07-22 00:35:41,490 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-22 00:35:41,491 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-07-22 00:35:41,497 [ scc.git] DEBUG Calling 'git fetch origin pull/564/head' 2024-07-22 00:35:41,854 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-22 00:35:41,855 [ scc.git] DEBUG * branch refs/pull/564/head -> FETCH_HEAD 2024-07-22 00:35:41,860 [ scc.git] DEBUG ## Unique users: [] 2024-07-22 00:35:41,860 [ scc.git] DEBUG Get sha1 of %s 2024-07-22 00:35:41,860 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:35:41,866 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-07-22 00:35:41,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:35:41,878 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-07-22 00:35:41,900 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2024-07-22 00:35:41,901 [ scc.git] DEBUG Auto-merging setup.py 2024-07-22 00:35:41,911 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-22 00:35:41,914 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2024-07-22 00:35:41,915 [ scc.git] DEBUG setup.py | 1 + 2024-07-22 00:35:41,915 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2024-07-22 00:35:42,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-22 00:35:42,094 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-07-22 00:35:42,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:35:42,113 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-07-22 00:35:42,205 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2024-07-22 00:35:42,205 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-07-22 00:35:42,213 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-22 00:35:42,217 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2024-07-22 00:35:42,217 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2024-07-22 00:35:42,217 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2024-07-22 00:35:42,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-22 00:35:42,506 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...97e479b717e34179eceea2507d3e69a04b2fec1e' 2024-07-22 00:35:42,516 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:35:42,522 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Archive status) 97e479b717e34179eceea2507d3e69a04b2fec1e' 2024-07-22 00:35:42,577 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-07-22 00:35:42,578 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-22 00:35:42,583 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.tree.js | 3 +++ 2024-07-22 00:35:42,583 [ scc.git] DEBUG .../webclient/annotations/includes/core_metadata.html | 6 ++++++ 2024-07-22 00:35:42,583 [ scc.git] DEBUG omeroweb/webclient/tree.py | 10 ++++++++-- 2024-07-22 00:35:42,583 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 1 + 2024-07-22 00:35:42,583 [ scc.git] DEBUG 4 files changed, 18 insertions(+), 2 deletions(-) 2024-07-22 00:35:42,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-22 00:35:42,934 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...091e5fc2d35212271ac71fd66b42c611299d6fde' 2024-07-22 00:35:42,943 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:35:42,949 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 564 (New table API endpoints for lower level table access) 091e5fc2d35212271ac71fd66b42c611299d6fde' 2024-07-22 00:35:43,015 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2024-07-22 00:35:43,016 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py 2024-07-22 00:35:43,020 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-22 00:35:43,026 [ scc.git] DEBUG omeroweb/settings.py | 7 ++ 2024-07-22 00:35:43,026 [ scc.git] DEBUG omeroweb/webgateway/urls.py | 29 +++++++ 2024-07-22 00:35:43,026 [ scc.git] DEBUG omeroweb/webgateway/views.py | 175 ++++++++++++++++++++++++++++++++++++++++++- 2024-07-22 00:35:43,026 [ scc.git] DEBUG 3 files changed, 210 insertions(+), 1 deletion(-) 2024-07-22 00:35:43,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-22 00:35:43,354 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-22 00:35:43,402 [ scc.git] DEBUG Get sha1 of %s 2024-07-22 00:35:43,402 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-22 00:35:43,408 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-22 00:35:43,454 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-22 00:35:43,469 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f37511eb4f0> has no local changes 2024-07-22 00:35:43,469 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Updating 5a2cd79d7..ba8c7e23c Previously merged: - PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS' - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' - PR 562 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 560 will-moore 'linkify supports urls that include $ character' - PR 558 jburel 'Update readme' Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 555 chris-allan 'Archive status' - PR 564 knabar 'New table API endpoints for lower level table access' Generated by OMERO-python-superbuild-push#123 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/123/)' 2024-07-22 00:35:43,482 [ scc.git] DEBUG [detached HEAD 6d469386e] merge master -Dorg -Ssuccess-only 2024-07-22 00:35:43,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-22 00:35:43,483 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-22 00:35:43,543 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2024-07-22 00:35:43,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-22 00:35:43,785 [ scc.config] DEBUG Found submodule.omero-marshal.url 2024-07-22 00:35:44,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-22 00:35:44,231 [ scc.config] DEBUG Found submodule.omero-py.url 2024-07-22 00:35:44,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-22 00:35:44,651 [ scc.config] DEBUG Found submodule.omero-scripts.url 2024-07-22 00:35:45,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-22 00:35:45,058 [ scc.config] DEBUG Found submodule.omero-web.url 2024-07-22 00:35:45,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-22 00:35:45,509 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-22 00:35:45,542 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f37522e28e0> has local changes 2024-07-22 00:35:45,542 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Updating 5a2cd79d7..ba8c7e23c Previously merged: - PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS' - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' - PR 562 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 560 will-moore 'linkify supports urls that include $ character' - PR 558 jburel 'Update readme' Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 555 chris-allan 'Archive status' - PR 564 knabar 'New table API endpoints for lower level table access' Generated by OMERO-python-superbuild-push#123 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/123/)' 2024-07-22 00:35:45,555 [ scc.git] DEBUG [detached HEAD 4f45f6c] merge master -Dorg -Ssuccess-only 2024-07-22 00:35:45,555 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2024-07-22 00:35:45,556 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-07-22 00:35:45,556 [ scc.merge] INFO Already up to date. 2024-07-22 00:35:45,556 [ scc.merge] INFO 2024-07-22 00:35:45,556 [ scc.merge] INFO 2024-07-22 00:35:45,556 [ scc.merge] INFO Repository: ome/omero-dropbox 2024-07-22 00:35:45,556 [ scc.merge] INFO Already up to date. 2024-07-22 00:35:45,556 [ scc.merge] INFO 2024-07-22 00:35:45,556 [ scc.merge] INFO Merged PRs: 2024-07-22 00:35:45,556 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-07-22 00:35:45,556 [ scc.merge] INFO 2024-07-22 00:35:45,556 [ scc.merge] INFO Repository: ome/omero-marshal 2024-07-22 00:35:45,556 [ scc.merge] INFO Excluded PRs: 2024-07-22 00:35:45,556 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2024-07-22 00:35:45,556 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2024-07-22 00:35:45,557 [ scc.merge] INFO Already up to date. 2024-07-22 00:35:45,557 [ scc.merge] INFO 2024-07-22 00:35:45,557 [ scc.merge] INFO Merged PRs: 2024-07-22 00:35:45,557 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2024-07-22 00:35:45,557 [ scc.merge] INFO 2024-07-22 00:35:45,557 [ scc.merge] INFO Repository: ome/omero-py 2024-07-22 00:35:45,557 [ scc.merge] INFO Excluded PRs: 2024-07-22 00:35:45,557 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2024-07-22 00:35:45,557 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude) 2024-07-22 00:35:45,557 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) 2024-07-22 00:35:45,557 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) 2024-07-22 00:35:45,557 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) 2024-07-22 00:35:45,557 [ scc.merge] INFO Already up to date. 2024-07-22 00:35:45,557 [ scc.merge] INFO 2024-07-22 00:35:45,557 [ scc.merge] INFO Merged PRs: 2024-07-22 00:35:45,557 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2024-07-22 00:35:45,557 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error' 2024-07-22 00:35:45,557 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-07-22 00:35:45,557 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' 2024-07-22 00:35:45,557 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2024-07-22 00:35:45,557 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-07-22 00:35:45,557 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2024-07-22 00:35:45,557 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2024-07-22 00:35:45,557 [ scc.merge] INFO 2024-07-22 00:35:45,558 [ scc.merge] INFO Repository: ome/omero-scripts 2024-07-22 00:35:45,558 [ scc.merge] INFO Excluded PRs: 2024-07-22 00:35:45,558 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-07-22 00:35:45,558 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-07-22 00:35:45,558 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-07-22 00:35:45,558 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-07-22 00:35:45,558 [ scc.merge] INFO Already up to date. 2024-07-22 00:35:45,558 [ scc.merge] INFO 2024-07-22 00:35:45,558 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-22 00:35:45,558 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-07-22 00:35:45,558 [ scc.merge] INFO 2024-07-22 00:35:45,558 [ scc.merge] INFO Repository: ome/omero-web 2024-07-22 00:35:45,558 [ scc.merge] INFO Excluded PRs: 2024-07-22 00:35:45,558 [ scc.merge] INFO - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT) 2024-07-22 00:35:45,558 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2024-07-22 00:35:45,558 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2024-07-22 00:35:45,558 [ scc.merge] INFO Updating 5a2cd79d7..ba8c7e23c 2024-07-22 00:35:45,558 [ scc.merge] INFO Previously merged: 2024-07-22 00:35:45,558 [ scc.merge] INFO - PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS' 2024-07-22 00:35:45,558 [ scc.merge] INFO - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' 2024-07-22 00:35:45,558 [ scc.merge] INFO - PR 562 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' 2024-07-22 00:35:45,558 [ scc.merge] INFO - PR 560 will-moore 'linkify supports urls that include $ character' 2024-07-22 00:35:45,558 [ scc.merge] INFO - PR 558 jburel 'Update readme' 2024-07-22 00:35:45,558 [ scc.merge] INFO 2024-07-22 00:35:45,558 [ scc.merge] INFO Merged PRs: 2024-07-22 00:35:45,559 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2024-07-22 00:35:45,559 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-07-22 00:35:45,559 [ scc.merge] INFO - PR 555 chris-allan 'Archive status' 2024-07-22 00:35:45,559 [ scc.merge] INFO - PR 564 knabar 'New table API endpoints for lower level table access' 2024-07-22 00:35:45,559 [ scc.merge] INFO 2024-07-22 00:35:45,559 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-07-22 00:35:45,559 [ scc.git] DEBUG Calling 'git remote' 2024-07-22 00:35:45,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-07-22 00:35:45,566 [ scc.git] DEBUG Calling 'git remote' 2024-07-22 00:35:45,571 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-22 00:35:45,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-07-22 00:35:45,572 [ scc.git] DEBUG Calling 'git remote' 2024-07-22 00:35:45,577 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-22 00:35:45,577 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-07-22 00:35:45,577 [ scc.git] DEBUG Calling 'git remote' 2024-07-22 00:35:45,583 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-22 00:35:45,583 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-07-22 00:35:45,583 [ scc.git] DEBUG Calling 'git remote' 2024-07-22 00:35:45,589 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-22 00:35:45,589 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-07-22 00:35:45,589 [ scc.git] DEBUG Calling 'git remote' 2024-07-22 00:35:45,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from a4307f4 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from cca4c2f nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 749a68ac nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from c20d273 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 5a2cd79d7 nothing to commit, working tree clean HEAD detached from cc9eff3 nothing to commit, working tree clean 2024-07-22 00:36:16,443 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS